Query 044823
Match_columns 497
No_of_seqs 146 out of 1383
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 12:16:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044823.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044823hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 6E-68 2E-72 533.9 40.9 432 6-482 12-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 1.9E-62 6.4E-67 502.3 42.7 456 1-493 1-480 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 3.3E-62 1.1E-66 502.1 38.5 452 1-482 1-478 (482)
4 2c1x_A UDP-glucose flavonoid 3 100.0 3.1E-61 1.1E-65 490.1 40.3 439 1-483 1-452 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 5.6E-61 1.9E-65 489.5 36.6 439 5-482 7-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 8E-45 2.7E-49 368.4 33.9 395 5-482 10-420 (424)
7 4amg_A Snogd; transferase, pol 100.0 4.4E-44 1.5E-48 360.1 26.4 366 5-482 20-399 (400)
8 1iir_A Glycosyltransferase GTF 100.0 7.2E-42 2.5E-46 345.5 23.3 383 8-489 1-406 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 3E-40 1E-44 333.8 25.4 383 8-491 1-409 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 8.2E-40 2.8E-44 330.6 27.9 378 5-481 18-411 (415)
11 3ia7_A CALG4; glycosysltransfe 100.0 7.1E-39 2.4E-43 322.2 31.3 382 5-482 2-397 (402)
12 3h4t_A Glycosyltransferase GTF 100.0 2.4E-39 8.3E-44 325.6 27.1 367 8-482 1-381 (404)
13 2iyf_A OLED, oleandomycin glyc 100.0 3.9E-38 1.3E-42 319.9 31.2 384 1-482 1-398 (430)
14 2yjn_A ERYCIII, glycosyltransf 100.0 4.5E-38 1.6E-42 320.3 26.0 382 5-483 18-435 (441)
15 2p6p_A Glycosyl transferase; X 100.0 4.5E-37 1.5E-41 307.3 27.2 356 8-483 1-379 (384)
16 4fzr_A SSFS6; structural genom 100.0 1E-35 3.5E-40 298.9 22.1 351 4-461 12-383 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 2.3E-34 8E-39 289.0 26.2 364 5-482 18-396 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 8.7E-34 3E-38 284.1 26.4 363 7-482 1-387 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 8.5E-31 2.9E-35 264.2 29.4 367 4-482 17-407 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 5.9E-28 2E-32 238.8 25.1 341 8-481 3-354 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 5.3E-27 1.8E-31 206.3 14.2 162 267-461 7-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 9.7E-19 3.3E-23 172.8 25.8 322 8-455 7-336 (364)
23 2jzc_A UDP-N-acetylglucosamine 99.6 4.9E-15 1.7E-19 133.4 8.5 120 279-409 26-184 (224)
24 3hbm_A UDP-sugar hydrolase; PS 99.6 7.2E-14 2.5E-18 131.1 16.7 117 281-412 157-275 (282)
25 1v4v_A UDP-N-acetylglucosamine 99.4 1.1E-11 3.7E-16 122.7 20.9 163 281-486 198-369 (376)
26 3okp_A GDP-mannose-dependent a 99.4 2.3E-10 7.9E-15 113.5 30.6 333 5-458 2-360 (394)
27 3c48_A Predicted glycosyltrans 99.4 7.8E-11 2.7E-15 118.9 27.5 381 5-486 18-430 (438)
28 2gek_A Phosphatidylinositol ma 99.3 3.6E-10 1.2E-14 112.7 23.6 329 5-458 18-365 (406)
29 1vgv_A UDP-N-acetylglucosamine 99.3 6.9E-11 2.4E-15 117.1 17.9 337 8-453 1-353 (384)
30 3fro_A GLGA glycogen synthase; 99.3 1E-08 3.6E-13 103.0 33.5 392 6-483 1-429 (439)
31 2r60_A Glycosyl transferase, g 99.3 6.7E-10 2.3E-14 114.2 24.0 376 1-459 1-441 (499)
32 2iw1_A Lipopolysaccharide core 99.2 6.6E-09 2.3E-13 102.2 27.5 162 283-479 197-369 (374)
33 3dzc_A UDP-N-acetylglucosamine 99.2 4.2E-09 1.4E-13 104.6 23.9 330 5-444 23-369 (396)
34 3ot5_A UDP-N-acetylglucosamine 99.2 6.4E-09 2.2E-13 103.5 24.2 323 5-444 25-363 (403)
35 2jjm_A Glycosyl transferase, g 99.1 5.3E-08 1.8E-12 96.6 27.8 333 7-457 15-365 (394)
36 2iuy_A Avigt4, glycosyltransfe 99.1 7.4E-09 2.5E-13 100.7 20.5 125 284-441 164-307 (342)
37 3beo_A UDP-N-acetylglucosamine 99.1 2.9E-08 9.8E-13 97.7 24.2 330 5-451 6-351 (375)
38 2x6q_A Trehalose-synthase TRET 99.0 1.2E-07 4.2E-12 94.7 27.9 93 341-457 292-394 (416)
39 4hwg_A UDP-N-acetylglucosamine 98.9 5E-08 1.7E-12 96.3 18.6 324 7-449 9-349 (385)
40 3s28_A Sucrose synthase 1; gly 98.8 5.4E-07 1.8E-11 96.5 21.2 95 341-457 639-749 (816)
41 1rzu_A Glycogen synthase 1; gl 98.6 1.8E-06 6.2E-11 88.0 20.6 142 284-453 293-454 (485)
42 2qzs_A Glycogen synthase; glyc 98.6 2.3E-06 8E-11 87.2 19.4 141 283-453 293-455 (485)
43 2f9f_A First mannosyl transfer 98.6 4.4E-07 1.5E-11 79.1 11.4 140 284-454 25-175 (177)
44 3oy2_A Glycosyltransferase B73 98.6 1.2E-05 4.2E-10 79.9 23.4 146 283-456 185-369 (413)
45 2xci_A KDO-transferase, 3-deox 98.4 7E-05 2.4E-09 73.5 23.8 98 343-461 261-364 (374)
46 2vsy_A XCC0866; transferase, g 98.4 0.00036 1.2E-08 72.4 29.4 97 342-457 434-537 (568)
47 2hy7_A Glucuronosyltransferase 98.1 0.00035 1.2E-08 69.2 22.3 75 341-443 264-353 (406)
48 3qhp_A Type 1 capsular polysac 97.9 6.8E-05 2.3E-09 64.0 11.3 145 282-459 2-157 (166)
49 3q3e_A HMW1C-like glycosyltran 97.8 0.00024 8.3E-09 72.7 14.0 153 282-456 441-602 (631)
50 4gyw_A UDP-N-acetylglucosamine 97.6 0.00072 2.5E-08 72.0 15.5 191 280-496 521-722 (723)
51 2bfw_A GLGA glycogen synthase; 97.6 0.0012 4E-08 58.0 14.3 93 343-458 96-197 (200)
52 3tov_A Glycosyl transferase fa 97.0 0.02 6.8E-07 55.2 16.4 106 5-144 6-115 (349)
53 3rhz_A GTF3, nucleotide sugar 96.9 0.0026 9E-08 61.1 8.4 110 343-480 215-336 (339)
54 1psw_A ADP-heptose LPS heptosy 96.2 0.081 2.8E-06 50.7 14.5 103 8-144 1-106 (348)
55 2x0d_A WSAF; GT4 family, trans 94.4 0.081 2.8E-06 52.2 7.8 81 341-444 294-381 (413)
56 2gt1_A Lipopolysaccharide hept 94.1 1.7 5.8E-05 40.9 16.2 42 8-49 1-44 (326)
57 3vue_A GBSS-I, granule-bound s 93.7 0.61 2.1E-05 47.6 12.8 138 284-441 329-476 (536)
58 3vue_A GBSS-I, granule-bound s 88.1 0.24 8.2E-06 50.6 3.0 38 5-44 7-52 (536)
59 2wqk_A 5'-nucleotidase SURE; S 87.0 1.6 5.6E-05 39.3 7.5 114 7-147 1-127 (251)
60 2x0d_A WSAF; GT4 family, trans 85.4 0.43 1.5E-05 46.9 3.1 41 5-45 44-89 (413)
61 2ywr_A Phosphoribosylglycinami 84.6 14 0.00048 32.3 12.3 106 8-147 2-110 (216)
62 3nb0_A Glycogen [starch] synth 84.4 1.3 4.5E-05 45.9 6.1 44 344-389 495-551 (725)
63 1ccw_A Protein (glutamate muta 83.9 1.8 6.3E-05 34.9 5.8 50 6-55 2-51 (137)
64 3auf_A Glycinamide ribonucleot 83.7 16 0.00053 32.3 12.2 109 5-147 20-131 (229)
65 1uqt_A Alpha, alpha-trehalose- 82.3 7.8 0.00027 38.7 10.9 109 344-484 333-454 (482)
66 1kjn_A MTH0777; hypotethical p 82.0 3.2 0.00011 33.5 6.2 45 1-45 1-46 (157)
67 1g5t_A COB(I)alamin adenosyltr 80.0 19 0.00064 30.9 10.9 101 7-128 28-130 (196)
68 2yxb_A Coenzyme B12-dependent 78.9 2.8 9.7E-05 34.9 5.3 51 5-55 16-66 (161)
69 3t5t_A Putative glycosyltransf 78.4 53 0.0018 32.7 15.2 109 343-483 353-472 (496)
70 3zqu_A Probable aromatic acid 77.3 3 0.0001 36.4 5.1 41 6-47 3-43 (209)
71 3fgn_A Dethiobiotin synthetase 77.3 34 0.0012 30.6 12.4 123 6-149 24-167 (251)
72 1mvl_A PPC decarboxylase athal 76.3 2.8 9.6E-05 36.6 4.6 43 4-48 16-58 (209)
73 3q0i_A Methionyl-tRNA formyltr 75.3 37 0.0013 31.6 12.4 36 4-44 4-39 (318)
74 1y80_A Predicted cobalamin bin 74.2 6.2 0.00021 34.3 6.5 51 6-56 87-137 (210)
75 2iz6_A Molybdenum cofactor car 73.8 25 0.00085 29.6 9.8 103 268-389 34-140 (176)
76 3av3_A Phosphoribosylglycinami 73.3 45 0.0016 28.9 12.0 107 7-147 3-112 (212)
77 2i2x_B MTAC, methyltransferase 72.8 8.1 0.00028 34.9 7.1 51 5-55 121-171 (258)
78 4dzz_A Plasmid partitioning pr 72.4 22 0.00074 30.2 9.6 36 9-44 2-39 (206)
79 3mc3_A DSRE/DSRF-like family p 70.8 7 0.00024 31.3 5.5 41 8-48 16-59 (134)
80 1p3y_1 MRSD protein; flavoprot 70.7 2.5 8.5E-05 36.5 2.9 45 3-48 4-48 (194)
81 2qs7_A Uncharacterized protein 69.8 5.3 0.00018 32.5 4.6 50 1-50 2-51 (144)
82 3dfz_A SIRC, precorrin-2 dehyd 67.1 5.3 0.00018 35.2 4.3 171 274-483 26-202 (223)
83 1sbz_A Probable aromatic acid 66.8 6 0.00021 34.1 4.5 42 8-50 1-43 (197)
84 1jkx_A GART;, phosphoribosylgl 66.2 65 0.0022 27.9 11.6 106 8-147 1-109 (212)
85 3qjg_A Epidermin biosynthesis 65.7 7.8 0.00027 32.7 4.9 42 8-50 6-47 (175)
86 3ezx_A MMCP 1, monomethylamine 65.6 14 0.00047 32.4 6.7 52 5-56 90-141 (215)
87 3lqk_A Dipicolinate synthase s 64.6 7.7 0.00026 33.6 4.8 41 5-45 5-45 (201)
88 2bw0_A 10-FTHFDH, 10-formyltet 64.5 66 0.0023 30.0 11.6 106 5-148 20-130 (329)
89 1fmt_A Methionyl-tRNA FMet for 64.0 49 0.0017 30.7 10.6 100 6-148 2-112 (314)
90 3kcq_A Phosphoribosylglycinami 62.3 45 0.0015 29.0 9.4 105 3-147 4-112 (215)
91 2ejb_A Probable aromatic acid 61.3 12 0.0004 32.0 5.3 40 8-48 2-41 (189)
92 3mcu_A Dipicolinate synthase, 60.7 9 0.00031 33.3 4.5 40 5-45 3-43 (207)
93 4dim_A Phosphoribosylglycinami 59.2 33 0.0011 32.9 9.0 35 5-44 5-39 (403)
94 1qzu_A Hypothetical protein MD 57.8 9 0.00031 33.3 4.0 42 5-47 17-59 (206)
95 3tqr_A Phosphoribosylglycinami 57.7 71 0.0024 27.7 9.8 108 5-147 3-113 (215)
96 1id1_A Putative potassium chan 56.7 7.4 0.00025 31.7 3.2 34 6-44 2-35 (153)
97 3ty2_A 5'-nucleotidase SURE; s 56.6 12 0.00041 33.7 4.7 42 5-48 9-50 (261)
98 3da8_A Probable 5'-phosphoribo 56.1 41 0.0014 29.3 8.0 107 5-146 10-118 (215)
99 3pdi_A Nitrogenase MOFE cofact 55.9 84 0.0029 31.1 11.3 34 107-145 392-425 (483)
100 3u7q_B Nitrogenase molybdenum- 54.3 1.3E+02 0.0046 30.0 12.5 34 107-145 429-469 (523)
101 3vot_A L-amino acid ligase, BL 54.2 21 0.00071 34.7 6.6 35 106-142 65-101 (425)
102 2hy5_B Intracellular sulfur ox 54.0 14 0.00048 29.6 4.3 44 1-45 1-46 (136)
103 2r8r_A Sensor protein; KDPD, P 53.9 16 0.00055 32.2 5.0 40 6-45 5-44 (228)
104 3iqw_A Tail-anchored protein t 53.4 87 0.003 29.2 10.5 41 6-46 14-55 (334)
105 3g0o_A 3-hydroxyisobutyrate de 53.3 6.9 0.00023 36.3 2.7 38 1-43 1-38 (303)
106 2ixd_A LMBE-related protein; h 52.7 64 0.0022 28.5 9.0 20 104-125 85-104 (242)
107 1qgu_B Protein (nitrogenase mo 52.7 1.3E+02 0.0044 30.1 12.1 34 107-145 425-465 (519)
108 4ds3_A Phosphoribosylglycinami 51.8 79 0.0027 27.3 9.1 108 5-147 5-116 (209)
109 2g1u_A Hypothetical protein TM 51.0 13 0.00044 30.3 3.8 39 1-44 13-51 (155)
110 2bln_A Protein YFBG; transfera 50.6 92 0.0031 28.7 9.9 98 8-148 1-106 (305)
111 3tqq_A Methionyl-tRNA formyltr 50.2 1E+02 0.0036 28.4 10.3 33 7-44 2-34 (314)
112 3bgw_A DNAB-like replicative h 49.8 37 0.0013 33.3 7.5 45 8-52 198-242 (444)
113 2lnd_A De novo designed protei 49.5 21 0.00073 25.1 4.0 51 378-441 49-100 (112)
114 1g63_A Epidermin modifying enz 47.5 13 0.00046 31.4 3.4 40 8-48 3-42 (181)
115 3l6d_A Putative oxidoreductase 46.6 11 0.00037 35.0 3.0 37 1-42 3-39 (306)
116 3kkl_A Probable chaperone prot 46.6 28 0.00097 30.9 5.6 38 7-44 3-51 (244)
117 3bul_A Methionine synthase; tr 46.3 39 0.0013 34.3 7.1 51 6-56 97-147 (579)
118 1bg6_A N-(1-D-carboxylethyl)-L 44.7 14 0.00048 34.9 3.5 34 5-43 2-35 (359)
119 1meo_A Phosophoribosylglycinam 44.4 1.5E+02 0.0052 25.4 11.5 106 8-147 1-109 (209)
120 3kjh_A CO dehydrogenase/acetyl 44.0 15 0.00052 32.4 3.4 36 8-43 1-36 (254)
121 4b4o_A Epimerase family protei 44.0 15 0.00052 33.5 3.5 33 8-44 1-33 (298)
122 3ghy_A Ketopantoate reductase 43.9 12 0.00042 35.1 2.9 33 7-44 3-35 (335)
123 3n7t_A Macrophage binding prot 43.8 39 0.0013 30.1 6.0 38 7-44 9-57 (247)
124 4hb9_A Similarities with proba 41.3 17 0.00057 34.8 3.5 30 7-41 1-30 (412)
125 2q6t_A DNAB replication FORK h 41.1 2E+02 0.0069 27.8 11.4 45 8-52 201-246 (444)
126 1ydh_A AT5G11950; structural g 40.8 82 0.0028 27.3 7.5 102 269-388 31-143 (216)
127 3rg8_A Phosphoribosylaminoimid 40.3 1.5E+02 0.0052 24.2 9.7 138 283-463 4-149 (159)
128 2dpo_A L-gulonate 3-dehydrogen 40.2 17 0.00058 34.0 3.1 38 1-44 1-38 (319)
129 1pjq_A CYSG, siroheme synthase 40.0 77 0.0026 31.1 8.1 148 281-463 13-168 (457)
130 2vo1_A CTP synthase 1; pyrimid 39.7 31 0.0011 31.1 4.5 40 5-44 20-62 (295)
131 1mio_B Nitrogenase molybdenum 39.5 2.1E+02 0.007 28.0 11.1 34 107-145 376-409 (458)
132 1uan_A Hypothetical protein TT 38.5 1.5E+02 0.0051 25.8 9.0 20 104-125 83-102 (227)
133 3eag_A UDP-N-acetylmuramate:L- 38.1 30 0.001 32.3 4.5 34 6-43 3-36 (326)
134 3hn2_A 2-dehydropantoate 2-red 37.9 46 0.0016 30.6 5.8 32 8-44 3-34 (312)
135 3i83_A 2-dehydropantoate 2-red 37.8 46 0.0016 30.8 5.8 33 8-45 3-35 (320)
136 1lss_A TRK system potassium up 37.5 24 0.00083 27.5 3.4 33 7-44 4-36 (140)
137 3zzm_A Bifunctional purine bio 37.2 78 0.0027 31.3 7.3 110 6-135 8-118 (523)
138 2xj4_A MIPZ; replication, cell 36.6 36 0.0012 30.9 4.8 38 7-44 3-42 (286)
139 2kw0_A CCMH protein; oxidoredu 36.3 73 0.0025 23.3 5.3 43 450-492 39-81 (90)
140 3dfu_A Uncharacterized protein 36.1 26 0.00087 31.0 3.4 35 5-44 4-38 (232)
141 3gpi_A NAD-dependent epimerase 35.9 41 0.0014 30.3 5.1 33 7-44 3-35 (286)
142 3pid_A UDP-glucose 6-dehydroge 35.6 22 0.00077 34.7 3.3 37 1-43 30-66 (432)
143 3eod_A Protein HNR; response r 35.5 74 0.0025 24.0 6.0 38 1-42 1-38 (130)
144 3s2u_A UDP-N-acetylglucosamine 35.5 37 0.0013 32.1 4.9 96 282-385 4-120 (365)
145 3hwr_A 2-dehydropantoate 2-red 35.5 23 0.00079 32.9 3.3 31 6-41 18-48 (318)
146 3llv_A Exopolyphosphatase-rela 35.3 22 0.00076 28.1 2.8 34 6-44 5-38 (141)
147 2phj_A 5'-nucleotidase SURE; S 35.1 40 0.0014 30.1 4.6 113 8-147 2-127 (251)
148 1e2b_A Enzyme IIB-cellobiose; 35.0 77 0.0026 23.9 5.6 39 6-44 2-40 (106)
149 1jx7_A Hypothetical protein YC 34.9 38 0.0013 25.7 4.0 28 18-45 15-44 (117)
150 4dll_A 2-hydroxy-3-oxopropiona 34.8 40 0.0014 31.2 4.9 33 6-43 30-62 (320)
151 2zts_A Putative uncharacterize 34.8 39 0.0013 29.5 4.6 46 9-54 32-78 (251)
152 2ew2_A 2-dehydropantoate 2-red 34.5 25 0.00085 32.3 3.4 32 7-43 3-34 (316)
153 3l4e_A Uncharacterized peptida 33.8 75 0.0026 27.3 6.1 48 269-316 16-63 (206)
154 2wm1_A 2-amino-3-carboxymucona 33.3 84 0.0029 29.0 6.9 72 233-319 103-177 (336)
155 1rw7_A YDR533CP; alpha-beta sa 32.5 79 0.0027 27.9 6.2 38 7-44 3-51 (243)
156 1t35_A Hypothetical protein YV 32.3 1.3E+02 0.0044 25.5 7.2 103 269-388 23-135 (191)
157 2hy5_A Putative sulfurtransfer 32.3 65 0.0022 25.2 5.0 35 11-45 5-42 (130)
158 3qha_A Putative oxidoreductase 32.2 23 0.0008 32.4 2.7 32 7-43 15-46 (296)
159 4gh9_A Polymerase cofactor VP3 32.1 1.4E+02 0.0047 23.0 6.3 68 425-494 23-103 (146)
160 1tjn_A Sirohydrochlorin cobalt 31.9 54 0.0018 26.7 4.6 37 281-317 25-63 (156)
161 3pdi_B Nitrogenase MOFE cofact 31.6 38 0.0013 33.4 4.3 34 107-145 366-399 (458)
162 1xp8_A RECA protein, recombina 31.6 1.6E+02 0.0055 27.8 8.5 40 9-48 76-115 (366)
163 3lyh_A Cobalamin (vitamin B12) 31.5 1.8E+02 0.006 22.3 8.5 37 281-317 6-42 (126)
164 1evy_A Glycerol-3-phosphate de 30.9 22 0.00075 33.7 2.4 32 8-44 16-47 (366)
165 1xrs_B D-lysine 5,6-aminomutas 30.8 42 0.0014 30.2 4.0 50 6-55 119-177 (262)
166 3doj_A AT3G25530, dehydrogenas 30.4 39 0.0013 31.2 3.9 34 5-43 19-52 (310)
167 1pno_A NAD(P) transhydrogenase 30.4 54 0.0019 27.0 4.1 38 7-44 23-63 (180)
168 1f0y_A HCDH, L-3-hydroxyacyl-C 30.1 31 0.0011 31.7 3.2 34 6-44 14-47 (302)
169 4e5s_A MCCFLIKE protein (BA_56 30.1 68 0.0023 30.0 5.5 73 295-389 63-137 (331)
170 2a5l_A Trp repressor binding p 30.0 61 0.0021 27.2 4.9 39 6-44 4-43 (200)
171 3end_A Light-independent proto 29.9 57 0.0019 29.8 5.0 38 6-43 40-77 (307)
172 1d4o_A NADP(H) transhydrogenas 29.9 56 0.0019 27.0 4.1 37 8-44 23-62 (184)
173 1pzg_A LDH, lactate dehydrogen 29.5 29 0.00098 32.5 2.8 38 2-44 4-42 (331)
174 3qvl_A Putative hydantoin race 29.4 2.9E+02 0.01 24.2 11.0 40 103-145 57-97 (245)
175 2q62_A ARSH; alpha/beta, flavo 29.3 69 0.0024 28.5 5.2 40 4-43 31-73 (247)
176 2hl7_A Cytochrome C-type bioge 29.2 88 0.003 22.5 4.7 42 450-491 42-83 (84)
177 2r85_A PURP protein PF1517; AT 28.9 51 0.0018 30.4 4.6 33 7-45 2-34 (334)
178 3ic5_A Putative saccharopine d 28.9 44 0.0015 25.0 3.4 34 6-44 4-38 (118)
179 2zki_A 199AA long hypothetical 28.6 53 0.0018 27.7 4.2 37 7-44 4-41 (199)
180 3hr8_A Protein RECA; alpha and 28.5 2.8E+02 0.0097 26.0 9.6 39 9-47 63-101 (356)
181 3vps_A TUNA, NAD-dependent epi 28.5 27 0.00093 32.0 2.5 40 1-44 1-40 (321)
182 2w36_A Endonuclease V; hypoxan 28.4 79 0.0027 27.6 5.2 40 107-146 92-138 (225)
183 3fwz_A Inner membrane protein 28.3 27 0.00094 27.7 2.2 33 7-44 7-39 (140)
184 3rpe_A MDAB, modulator of drug 28.3 64 0.0022 28.1 4.7 43 1-43 19-68 (218)
185 2lpm_A Two-component response 28.3 48 0.0017 25.8 3.6 34 111-146 48-86 (123)
186 2xws_A Sirohydrochlorin cobalt 28.2 53 0.0018 25.7 3.9 36 282-317 5-42 (133)
187 3cky_A 2-hydroxymethyl glutara 28.2 56 0.0019 29.7 4.6 33 6-43 3-35 (301)
188 2h78_A Hibadh, 3-hydroxyisobut 28.1 43 0.0015 30.6 3.8 33 6-43 2-34 (302)
189 3rfo_A Methionyl-tRNA formyltr 28.0 62 0.0021 30.0 4.8 36 5-45 2-37 (317)
190 3q9l_A Septum site-determining 27.9 58 0.002 28.7 4.6 36 9-44 3-40 (260)
191 2qyt_A 2-dehydropantoate 2-red 27.9 19 0.00065 33.2 1.3 33 6-43 7-45 (317)
192 1z82_A Glycerol-3-phosphate de 27.8 39 0.0013 31.5 3.5 33 7-44 14-46 (335)
193 1z7e_A Protein aRNA; rossmann 27.7 1.3E+02 0.0045 31.0 7.8 98 8-148 1-106 (660)
194 3f67_A Putative dienelactone h 27.7 78 0.0027 26.9 5.3 38 7-44 31-68 (241)
195 3k96_A Glycerol-3-phosphate de 27.7 35 0.0012 32.4 3.1 34 6-44 28-61 (356)
196 2q5c_A NTRC family transcripti 27.6 2.8E+02 0.0094 23.4 11.1 41 106-152 133-173 (196)
197 2fsv_C NAD(P) transhydrogenase 27.5 63 0.0022 27.3 4.1 37 8-44 47-86 (203)
198 4e12_A Diketoreductase; oxidor 27.5 47 0.0016 30.1 3.9 33 6-43 3-35 (283)
199 4e5v_A Putative THUA-like prot 27.5 72 0.0025 29.0 5.1 39 5-44 2-43 (281)
200 3obb_A Probable 3-hydroxyisobu 27.4 46 0.0016 30.6 3.8 31 7-42 3-33 (300)
201 1tvm_A PTS system, galactitol- 27.2 1.3E+02 0.0045 22.8 5.8 39 4-42 18-57 (113)
202 3dhn_A NAD-dependent epimerase 27.1 53 0.0018 28.1 4.1 34 7-44 4-37 (227)
203 2l2q_A PTS system, cellobiose- 27.1 82 0.0028 23.7 4.6 38 6-43 3-40 (109)
204 2d1p_B TUSC, hypothetical UPF0 27.1 85 0.0029 24.1 4.8 36 10-45 5-42 (119)
205 3cg4_A Response regulator rece 27.0 1E+02 0.0035 23.6 5.5 39 1-43 1-39 (142)
206 1ks9_A KPA reductase;, 2-dehyd 27.0 40 0.0014 30.4 3.4 32 8-44 1-32 (291)
207 1djl_A Transhydrogenase DIII; 27.0 65 0.0022 27.3 4.1 37 8-44 46-85 (207)
208 2x5n_A SPRPN10, 26S proteasome 26.9 2.1E+02 0.0073 24.0 7.8 59 10-70 110-171 (192)
209 1rcu_A Conserved hypothetical 26.9 2.9E+02 0.0098 23.4 8.4 95 270-387 49-149 (195)
210 2gk4_A Conserved hypothetical 26.9 46 0.0016 29.3 3.5 26 18-45 28-53 (232)
211 3e9m_A Oxidoreductase, GFO/IDH 26.8 2.9E+02 0.0098 25.3 9.4 111 282-412 7-126 (330)
212 4e21_A 6-phosphogluconate dehy 26.7 42 0.0014 31.8 3.5 34 5-43 20-53 (358)
213 3q2i_A Dehydrogenase; rossmann 26.6 2.3E+02 0.0078 26.3 8.7 110 282-412 15-134 (354)
214 1cp2_A CP2, nitrogenase iron p 26.6 60 0.0021 28.8 4.4 34 8-41 2-35 (269)
215 3lrx_A Putative hydrogenase; a 26.3 61 0.0021 26.3 4.0 37 7-46 23-59 (158)
216 1g3q_A MIND ATPase, cell divis 26.2 69 0.0023 27.7 4.7 30 15-44 11-40 (237)
217 3c24_A Putative oxidoreductase 26.2 52 0.0018 29.8 3.9 31 8-43 12-43 (286)
218 3dm5_A SRP54, signal recogniti 26.2 1.6E+02 0.0054 28.7 7.5 44 7-50 100-143 (443)
219 3tl4_X Glutaminyl-tRNA synthet 26.2 57 0.002 27.6 3.8 73 393-485 102-181 (187)
220 2pd6_A Estradiol 17-beta-dehyd 26.1 91 0.0031 27.4 5.6 40 1-44 1-40 (264)
221 2afh_E Nitrogenase iron protei 26.0 69 0.0023 28.9 4.8 34 8-41 3-36 (289)
222 3goc_A Endonuclease V; alpha-b 25.9 98 0.0033 27.2 5.3 40 106-145 95-141 (237)
223 2raf_A Putative dinucleotide-b 25.8 47 0.0016 28.5 3.4 34 6-44 18-51 (209)
224 2vrn_A Protease I, DR1199; cys 25.8 1.3E+02 0.0045 24.9 6.3 39 5-44 7-45 (190)
225 1ehi_A LMDDL2, D-alanine:D-lac 25.6 63 0.0021 30.7 4.5 38 6-43 2-44 (377)
226 4huj_A Uncharacterized protein 25.5 29 0.001 30.1 2.0 34 5-43 21-54 (220)
227 4e3z_A Putative oxidoreductase 25.4 2.1E+02 0.0073 25.2 8.0 36 5-43 23-58 (272)
228 2e6c_A 5'-nucleotidase SURE; S 25.3 71 0.0024 28.3 4.4 39 8-48 1-39 (244)
229 2h31_A Multifunctional protein 25.3 3.3E+02 0.011 26.2 9.4 140 282-463 266-412 (425)
230 1gsa_A Glutathione synthetase; 25.3 60 0.002 29.5 4.3 37 8-44 2-41 (316)
231 3ahc_A Phosphoketolase, xylulo 25.2 4.3E+02 0.015 28.1 11.0 81 364-468 727-812 (845)
232 3d1l_A Putative NADP oxidoredu 25.1 28 0.00097 31.1 1.9 37 1-42 4-41 (266)
233 2a33_A Hypothetical protein; s 25.1 2.3E+02 0.0079 24.4 7.7 103 269-388 35-147 (215)
234 2fb6_A Conserved hypothetical 25.1 61 0.0021 25.0 3.5 37 8-44 8-48 (117)
235 3tsa_A SPNG, NDP-rhamnosyltran 25.0 78 0.0027 29.8 5.2 31 358-390 114-145 (391)
236 1j9j_A Stationary phase surviV 25.0 76 0.0026 28.2 4.6 39 8-48 1-39 (247)
237 3f6r_A Flavodoxin; FMN binding 24.9 74 0.0025 25.2 4.3 37 8-44 2-39 (148)
238 3to5_A CHEY homolog; alpha(5)b 24.9 94 0.0032 24.4 4.8 40 106-147 47-95 (134)
239 3g79_A NDP-N-acetyl-D-galactos 24.8 70 0.0024 31.6 4.8 35 5-44 16-52 (478)
240 4g6h_A Rotenone-insensitive NA 24.8 38 0.0013 33.8 2.9 35 5-44 40-74 (502)
241 1t1j_A Hypothetical protein; s 24.7 1E+02 0.0035 24.1 4.8 34 6-39 6-47 (125)
242 2d1p_A TUSD, hypothetical UPF0 24.7 1.4E+02 0.0046 23.8 5.7 39 6-44 11-53 (140)
243 2rjn_A Response regulator rece 24.4 1.3E+02 0.0043 23.6 5.7 39 1-43 1-39 (154)
244 4h1h_A LMO1638 protein; MCCF-l 24.4 96 0.0033 28.9 5.4 72 295-388 63-136 (327)
245 2r6j_A Eugenol synthase 1; phe 24.4 80 0.0027 28.8 5.0 33 9-45 13-45 (318)
246 3nur_A Amidohydrolase; TIM bar 24.3 1.1E+02 0.0039 28.7 6.0 53 268-320 144-196 (357)
247 3l4b_C TRKA K+ channel protien 24.0 26 0.0009 30.3 1.4 32 8-44 1-32 (218)
248 1u11_A PURE (N5-carboxyaminoim 24.0 3.2E+02 0.011 22.8 9.8 144 283-467 23-176 (182)
249 2yvq_A Carbamoyl-phosphate syn 23.9 1.1E+02 0.0038 24.4 5.1 96 11-144 27-130 (143)
250 3lzw_A Ferredoxin--NADP reduct 23.9 24 0.00084 32.4 1.2 35 5-44 5-39 (332)
251 1byi_A Dethiobiotin synthase; 23.8 81 0.0028 27.0 4.6 33 10-42 4-37 (224)
252 1o4v_A Phosphoribosylaminoimid 23.7 2.4E+02 0.0081 23.6 7.0 123 290-462 48-172 (183)
253 2bru_C NAD(P) transhydrogenase 23.7 64 0.0022 26.7 3.4 38 8-45 31-71 (186)
254 3sbx_A Putative uncharacterize 23.7 1.2E+02 0.004 25.7 5.3 102 269-388 34-146 (189)
255 1cyd_A Carbonyl reductase; sho 23.7 99 0.0034 26.7 5.3 40 1-44 1-40 (244)
256 3sxp_A ADP-L-glycero-D-mannohe 23.7 53 0.0018 30.8 3.6 37 4-44 7-45 (362)
257 3lyu_A Putative hydrogenase; t 23.6 67 0.0023 25.6 3.7 114 7-144 18-136 (142)
258 1zi8_A Carboxymethylenebutenol 23.6 99 0.0034 26.1 5.2 38 7-44 27-64 (236)
259 2hbv_A 2-amino-3-carboxymucona 23.5 2.2E+02 0.0074 26.1 7.9 26 294-319 155-180 (334)
260 3alj_A 2-methyl-3-hydroxypyrid 23.5 51 0.0017 31.1 3.5 34 5-43 9-42 (379)
261 2hmt_A YUAA protein; RCK, KTN, 23.2 39 0.0013 26.4 2.2 34 6-44 5-38 (144)
262 4da9_A Short-chain dehydrogena 23.1 3.4E+02 0.011 24.1 8.9 33 8-43 29-61 (280)
263 3hdv_A Response regulator; PSI 23.1 1.2E+02 0.0041 23.0 5.2 39 1-43 1-39 (136)
264 3sbx_A Putative uncharacterize 23.0 1.1E+02 0.0038 25.9 5.0 38 6-44 12-53 (189)
265 2v4n_A Multifunctional protein 23.0 90 0.0031 27.9 4.7 39 8-48 2-40 (254)
266 3h7a_A Short chain dehydrogena 23.0 1.9E+02 0.0064 25.3 7.0 39 1-43 1-39 (252)
267 3bfv_A CAPA1, CAPB2, membrane 23.0 1.2E+02 0.0041 27.2 5.7 39 6-44 80-120 (271)
268 1l5x_A SurviVal protein E; str 23.0 89 0.003 28.4 4.7 39 8-48 1-39 (280)
269 3euw_A MYO-inositol dehydrogen 23.0 2.7E+02 0.0093 25.6 8.5 110 282-412 6-124 (344)
270 3dtt_A NADP oxidoreductase; st 22.6 59 0.002 28.7 3.5 35 5-44 17-51 (245)
271 3gl9_A Response regulator; bet 22.6 1.3E+02 0.0045 22.3 5.2 33 117-149 45-86 (122)
272 2gdz_A NAD+-dependent 15-hydro 22.6 1.4E+02 0.0049 26.2 6.2 40 1-44 1-40 (267)
273 1hdo_A Biliverdin IX beta redu 22.5 72 0.0025 26.6 4.0 33 8-44 4-36 (206)
274 2pn1_A Carbamoylphosphate synt 22.4 1E+02 0.0036 28.2 5.4 34 5-44 2-37 (331)
275 2i2c_A Probable inorganic poly 22.4 31 0.0011 31.3 1.5 28 359-388 36-69 (272)
276 3ip0_A 2-amino-4-hydroxy-6-hyd 22.4 82 0.0028 25.8 3.9 27 283-309 2-28 (158)
277 3gt7_A Sensor protein; structu 22.3 1.2E+02 0.0043 23.7 5.2 39 1-43 1-39 (154)
278 2c5m_A CTP synthase; cytidine 22.2 76 0.0026 28.4 3.8 38 6-43 21-61 (294)
279 1ydg_A Trp repressor binding p 22.2 1.1E+02 0.0037 26.0 5.1 39 6-44 5-44 (211)
280 3of5_A Dethiobiotin synthetase 22.1 1.1E+02 0.0037 26.7 5.0 37 7-43 4-41 (228)
281 3ea0_A ATPase, para family; al 22.0 68 0.0023 27.9 3.8 38 7-44 3-43 (245)
282 4eg0_A D-alanine--D-alanine li 21.8 85 0.0029 28.8 4.6 38 7-44 13-54 (317)
283 1lld_A L-lactate dehydrogenase 21.8 46 0.0016 30.7 2.7 37 3-44 3-41 (319)
284 3ksu_A 3-oxoacyl-acyl carrier 21.8 1.8E+02 0.0062 25.6 6.7 32 9-43 12-43 (262)
285 2wm8_A MDP-1, magnesium-depend 21.7 3.3E+02 0.011 22.1 8.5 91 24-147 73-165 (187)
286 3qsg_A NAD-binding phosphogluc 21.6 46 0.0016 30.7 2.6 34 5-43 22-56 (312)
287 1o97_C Electron transferring f 21.5 1E+02 0.0035 27.7 4.8 40 106-147 102-147 (264)
288 3czc_A RMPB; alpha/beta sandwi 21.5 87 0.003 23.7 3.8 39 6-44 17-57 (110)
289 3e1t_A Halogenase; flavoprotei 21.5 43 0.0015 33.4 2.5 38 1-43 1-38 (512)
290 1e4e_A Vancomycin/teicoplanin 21.4 59 0.002 30.3 3.4 38 6-43 2-43 (343)
291 1dhr_A Dihydropteridine reduct 21.4 1.3E+02 0.0043 26.1 5.5 40 1-44 1-40 (241)
292 3u7q_A Nitrogenase molybdenum- 21.3 66 0.0023 32.0 3.8 34 107-145 408-441 (492)
293 1y1p_A ARII, aldehyde reductas 21.3 81 0.0028 28.9 4.4 38 3-44 7-44 (342)
294 2q3e_A UDP-glucose 6-dehydroge 21.2 76 0.0026 31.2 4.2 33 6-43 4-38 (467)
295 1zl0_A Hypothetical protein PA 21.2 1.4E+02 0.0049 27.5 5.8 74 294-389 64-139 (311)
296 4b4k_A N5-carboxyaminoimidazol 21.1 3.6E+02 0.012 22.4 12.2 145 282-467 23-177 (181)
297 3lk7_A UDP-N-acetylmuramoylala 21.1 1E+02 0.0036 30.0 5.2 34 5-43 7-40 (451)
298 3kkj_A Amine oxidase, flavin-c 21.0 52 0.0018 28.6 2.8 28 10-42 5-32 (336)
299 3pef_A 6-phosphogluconate dehy 21.0 64 0.0022 29.1 3.5 31 8-43 2-32 (287)
300 1xx6_A Thymidine kinase; NESG, 21.0 1.3E+02 0.0045 25.4 5.2 40 5-44 5-45 (191)
301 1efv_B Electron transfer flavo 21.0 1.1E+02 0.0037 27.4 4.8 39 106-146 106-150 (255)
302 3pdu_A 3-hydroxyisobutyrate de 20.8 61 0.0021 29.3 3.3 31 8-43 2-32 (287)
303 3lou_A Formyltetrahydrofolate 20.8 2.9E+02 0.0098 25.1 7.7 109 5-148 93-202 (292)
304 1qkk_A DCTD, C4-dicarboxylate 20.7 1.8E+02 0.0063 22.6 6.0 47 379-441 74-120 (155)
305 3nrc_A Enoyl-[acyl-carrier-pro 20.5 2.1E+02 0.0073 25.3 7.0 35 9-45 27-62 (280)
306 1f9y_A HPPK, protein (6-hydrox 20.5 94 0.0032 25.4 3.9 27 283-309 2-28 (158)
307 4gi5_A Quinone reductase; prot 20.5 1.5E+02 0.0053 26.7 5.8 38 5-42 20-60 (280)
308 2bcg_G Secretory pathway GDP d 20.4 61 0.0021 31.7 3.3 38 1-43 5-42 (453)
309 1r8j_A KAIA; circadian clock p 20.4 3.7E+02 0.013 24.0 7.8 70 392-481 158-228 (289)
310 1mv8_A GMD, GDP-mannose 6-dehy 20.4 87 0.003 30.5 4.4 31 8-43 1-31 (436)
311 3edm_A Short chain dehydrogena 20.4 3.1E+02 0.011 23.9 8.0 33 8-43 8-40 (259)
312 2y0c_A BCEC, UDP-glucose dehyd 20.3 67 0.0023 31.8 3.6 34 5-43 6-39 (478)
313 3s55_A Putative short-chain de 20.3 3.7E+02 0.013 23.6 8.6 32 9-43 11-42 (281)
314 1txg_A Glycerol-3-phosphate de 20.2 53 0.0018 30.4 2.7 31 8-43 1-31 (335)
315 2i87_A D-alanine-D-alanine lig 20.2 53 0.0018 31.0 2.8 38 6-43 2-43 (364)
316 3fkq_A NTRC-like two-domain pr 20.1 98 0.0034 29.3 4.7 39 6-44 141-181 (373)
317 4hcj_A THIJ/PFPI domain protei 20.1 1.6E+02 0.0054 24.4 5.5 37 7-44 7-44 (177)
318 1iow_A DD-ligase, DDLB, D-ALA\ 20.1 1.2E+02 0.0043 27.2 5.3 38 7-44 2-43 (306)
319 3db2_A Putative NADPH-dependen 20.0 3E+02 0.01 25.5 8.1 110 282-412 7-125 (354)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=6e-68 Score=533.92 Aligned_cols=432 Identities=26% Similarity=0.402 Sum_probs=350.3
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhCC--CeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCCC
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQHG--ATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGCE 83 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~rG--h~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~ 83 (497)
+++||+++|+|++||++|++.||+.|+++| +.|||++++.+..++..... ....+|+|+.+| +++|++.+
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~---~~~~~i~~~~ip-----dglp~~~~ 83 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN---EFLPNIKYYNVH-----DGLPKGYV 83 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS---CCCTTEEEEECC-----CCCCTTCC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc---cCCCCceEEecC-----CCCCCCcc
Confidence 468999999999999999999999999999 99999999855544422210 013469999987 57877765
Q ss_pred CCCCCCchhHHHHHHHHHH-hchHHHHHHHhhcCCCCeEEEECCCCcchHHHHHHcCCCeEEEechhHHHHHHHHHhhhh
Q 044823 84 NFDMLPSIDLAYNFLTSLQ-KLQLPFENLFREQTPQPCCIISDMCIPWTVDTAAKFNVPRIIFHGFSCFCLLCLDILRVS 162 (497)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~ 162 (497)
.... . ...+..+..... .+.+.+++++++.+.++||||+|.+++|+..+|+++|||++.|++++++.++.+++.+..
T Consensus 84 ~~~~-~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~ 161 (454)
T 3hbf_A 84 SSGN-P-REPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLI 161 (454)
T ss_dssp CCSC-T-THHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHH
T ss_pred ccCC-h-HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHH
Confidence 5443 2 234444444443 456666666655456899999999999999999999999999999999999888776542
Q ss_pred cccCC--CCCCCcc-ccCCCCCCCcccccccCCCCCC-C--chHHHHHHHHHHhcccccEEEecchhhhhHHHHHHHHhh
Q 044823 163 KVHEN--VSSDSEY-FKVPGFPHHIEFTKVQLPISPP-T--DELKEFNEKILAADKKTYGVIINTFEELESASVKEYKNA 236 (497)
Q Consensus 163 ~~~~~--~~~~~~~-~~~P~~~~~~~~~~~~l~~~~~-~--~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~ 236 (497)
..... ....+.+ ..+||+|. ++.++++.++. + ..+..++.+..+....++++++||+.+||++++++++..
T Consensus 162 ~~~~~~~~~~~~~~~~~iPg~p~---~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~ 238 (454)
T 3hbf_A 162 REKTGSKEVHDVKSIDVLPGFPE---LKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSK 238 (454)
T ss_dssp HHTCCHHHHTTSSCBCCSTTSCC---BCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTT
T ss_pred HhhcCCCccccccccccCCCCCC---cChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhc
Confidence 21100 0011223 35899986 78889988654 2 235667777777888899999999999999999888766
Q ss_pred cCCceEEeCcCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCcccCCHhhHHHHHHHHHhCCCCeEEE
Q 044823 237 KQGKVWCIGPVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWV 316 (497)
Q Consensus 237 ~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 316 (497)
+ +++++|||++...... ....++++.+||+.++++++|||||||+...+.+++.+++++|+..+++|||+
T Consensus 239 ~-~~v~~vGPl~~~~~~~---------~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~ 308 (454)
T 3hbf_A 239 F-KLLLNVGPFNLTTPQR---------KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWS 308 (454)
T ss_dssp S-SCEEECCCHHHHSCCS---------CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEE
T ss_pred C-CCEEEECCcccccccc---------cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEE
Confidence 5 7999999997643211 01135789999999888899999999999988999999999999999999999
Q ss_pred EeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCCccccccccCchhHHHHHHhCCcEeccCCcccchhhH
Q 044823 317 SRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFTDQFCNE 396 (497)
Q Consensus 317 ~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~~DQ~~na 396 (497)
++..... . +|++|.++. ++|+++++|+||..+|+|+++++|||||||||++|++++|||||++|+++||+.||
T Consensus 309 ~~~~~~~----~--lp~~~~~~~-~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na 381 (454)
T 3hbf_A 309 FRGDPKE----K--LPKGFLERT-KTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNT 381 (454)
T ss_dssp CCSCHHH----H--SCTTHHHHT-TTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHH
T ss_pred eCCcchh----c--CCHhHHhhc-CCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHH
Confidence 9875321 2 788887665 57888889999999999999888999999999999999999999999999999999
Q ss_pred HHHHHH-HcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHH
Q 044823 397 KLIVEV-LRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFGELAKRALEEGGSSYNNIK 475 (497)
Q Consensus 397 ~~~~e~-~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~ 475 (497)
++++ + +|+|+.++.. .++.++|.++|+++|+| ++++.||+||+++++++++++++||||.++++
T Consensus 382 ~~v~-~~~g~Gv~l~~~-------------~~~~~~l~~av~~ll~~-~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~ 446 (454)
T 3hbf_A 382 ILTE-SVLEIGVGVDNG-------------VLTKESIKKALELTMSS-EKGGIMRQKIVKLKESAFKAVEQNGTSAMDFT 446 (454)
T ss_dssp HHHH-TTSCSEEECGGG-------------SCCHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHH
T ss_pred HHHH-HhhCeeEEecCC-------------CCCHHHHHHHHHHHHCC-ChHHHHHHHHHHHHHHHHHhhccCCCHHHHHH
Confidence 9995 7 6999999865 69999999999999986 67889999999999999999999999999999
Q ss_pred HHHHHHh
Q 044823 476 FFHPRYH 482 (497)
Q Consensus 476 ~~~~~~~ 482 (497)
+||+++.
T Consensus 447 ~~v~~i~ 453 (454)
T 3hbf_A 447 TLIQIVT 453 (454)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9999875
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.9e-62 Score=502.30 Aligned_cols=456 Identities=28% Similarity=0.447 Sum_probs=332.0
Q ss_pred CCCCCCCcEEEEecCCCcCCHHHHHHHHHHHHhC-CCeEEEEeCCcc--hhhhHHHHHHhhhcCCCeEEEEecCCccccC
Q 044823 1 MASETSNFHFILLPFLAQGHLIPMFDIARLLAQH-GATATIVTTPVN--AARFKTVLARALQCRLQIRLIEIQFPWQEAG 77 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r-Gh~Vt~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~ 77 (497)
|+. .+++||+++|+|++||++|++.||++|++| ||+|||++++.+ ...+.+.. .....+++|+.++.+.
T Consensus 1 M~~-~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~---~~~~~~i~~~~l~~~~---- 72 (480)
T 2vch_A 1 MEE-SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVL---DSLPSSISSVFLPPVD---- 72 (480)
T ss_dssp ------CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHH---C-CCTTEEEEECCCCC----
T ss_pred CCC-CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhc---cccCCCceEEEcCCCC----
Confidence 644 456899999999999999999999999998 999999999864 23232211 0012479999887431
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHhchHHHHHHHhhc--CCCC-eEEEECCCCcchHHHHHHcCCCeEEEechhHHHHH
Q 044823 78 LPEGCENFDMLPSIDLAYNFLTSLQKLQLPFENLFREQ--TPQP-CCIISDMCIPWTVDTAAKFNVPRIIFHGFSCFCLL 154 (497)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~-D~vI~D~~~~~a~~~A~~lgIP~i~~~~~~~~~~~ 154 (497)
.+.. .. .. .....+......+...+++++++. ..++ |+||+|.++.|+..+|+++|||++.++++++...+
T Consensus 73 ~~~~---~~-~~--~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~ 146 (480)
T 2vch_A 73 LTDL---SS-ST--RIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLS 146 (480)
T ss_dssp CTTS---CT-TC--CHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHH
T ss_pred CCCC---CC-ch--hHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHH
Confidence 1111 11 11 222233334445556677776652 2578 99999999999999999999999999999988777
Q ss_pred HHHHhhhhcc--cCCCCCCCccccCCCCCCCcccccccCCCCCCCc--hHHHHHHHHHHhcccccEEEecchhhhhHHHH
Q 044823 155 CLDILRVSKV--HENVSSDSEYFKVPGFPHHIEFTKVQLPISPPTD--ELKEFNEKILAADKKTYGVIINTFEELESASV 230 (497)
Q Consensus 155 ~~~~~~~~~~--~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~ 230 (497)
.+++++.... ...+.....+..+|++++ +...+++..+..+ .....+.+..+..+.+.++++|++.++++...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~Pg~~p---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~ 223 (480)
T 2vch_A 147 FFLHLPKLDETVSCEFRELTEPLMLPGCVP---VAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAI 223 (480)
T ss_dssp HHHHHHHHHHHCCSCGGGCSSCBCCTTCCC---BCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHH
T ss_pred HHHHHHHHHhcCCCcccccCCcccCCCCCC---CChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHH
Confidence 7665443211 011111122345677765 4444554432221 23334444555667788999999999999877
Q ss_pred HHHHhhc--CCceEEeCcCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCcccCCHhhHHHHHHHHHh
Q 044823 231 KEYKNAK--QGKVWCIGPVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEA 308 (497)
Q Consensus 231 ~~~~~~~--~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~ 308 (497)
..+.... .+++++|||++....... .+..++++.+||+.++++++|||||||+...+.+++.+++++|+.
T Consensus 224 ~~l~~~~~~~~~v~~vGpl~~~~~~~~--------~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~ 295 (480)
T 2vch_A 224 KALQEPGLDKPPVYPVGPLVNIGKQEA--------KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLAD 295 (480)
T ss_dssp HHHHSCCTTCCCEEECCCCCCCSCSCC-------------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHhcccCCCcEEEEecccccccccc--------CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHh
Confidence 7775421 268999999976432100 011357899999998778899999999998889999999999999
Q ss_pred CCCCeEEEEeCCCch-----------hhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCCccccccccCchhHHHHH
Q 044823 309 SKKPFIWVSRVGNKL-----------EELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPAVGGFLTHCGWNSSLEGI 377 (497)
Q Consensus 309 ~~~~~i~~~~~~~~~-----------~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal 377 (497)
.+++|||+++..... .....+ +|+++.++.+..++++.+|+||.+||+|+++++|||||||||++||+
T Consensus 296 ~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~-lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal 374 (480)
T 2vch_A 296 SEQRFLWVIRSPSGIANSSYFDSHSQTDPLTF-LPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESV 374 (480)
T ss_dssp TTCEEEEEECCCCSSTTTTTTCC--CSCGGGG-SCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHH
T ss_pred cCCcEEEEECCccccccccccccccccchhhh-cCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHH
Confidence 999999999865310 111112 78888888777777787799999999999999999999999999999
Q ss_pred HhCCcEeccCCcccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHH
Q 044823 378 SAGVQMLTWPLFTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFG 457 (497)
Q Consensus 378 ~~GvP~l~~P~~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~ 457 (497)
++|||||++|+++||+.||+++++++|+|+.++..+ ++.+++++|+++|+++|++ ++++.||+||++++
T Consensus 375 ~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~----------~~~~~~~~l~~av~~vl~~-~~~~~~r~~a~~l~ 443 (480)
T 2vch_A 375 VSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGD----------DGLVRREEVARVVKGLMEG-EEGKGVRNKMKELK 443 (480)
T ss_dssp HHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCT----------TSCCCHHHHHHHHHHHHTS-THHHHHHHHHHHHH
T ss_pred HcCCCEEeccccccchHHHHHHHHHhCeEEEeeccc----------CCccCHHHHHHHHHHHhcC-cchHHHHHHHHHHH
Confidence 999999999999999999999745999999996531 1258999999999999974 35669999999999
Q ss_pred HHHHHHHhhCCChHHHHHHHHHHHh-hccCccCCccc
Q 044823 458 ELAKRALEEGGSSYNNIKFFHPRYH-ATADLRSDVNV 493 (497)
Q Consensus 458 ~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~ 493 (497)
+++++++.+||+|.+++++||+.+. ...+++..+||
T Consensus 444 ~~~~~a~~~gGss~~~~~~~v~~~~~~~~~~~~~~~~ 480 (480)
T 2vch_A 444 EAACRVLKDDGTSTKALSLVALKWKAHKKELEQNGNH 480 (480)
T ss_dssp HHHHHHTSTTSHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhHHHhhhcCCC
Confidence 9999999999999999999999886 44556665553
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=3.3e-62 Score=502.13 Aligned_cols=452 Identities=29% Similarity=0.489 Sum_probs=325.1
Q ss_pred CCCC-CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhc-CCCeEEEEecCCccccCC
Q 044823 1 MASE-TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQC-RLQIRLIEIQFPWQEAGL 78 (497)
Q Consensus 1 m~~~-~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~i~~~~~~~~~ 78 (497)
|+.. ++++||+++|+|++||++|++.||++|++|||+|||++++.+...+.+........ ..+++|+.++ +++
T Consensus 1 ~~~~~~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~-----~~l 75 (482)
T 2pq6_A 1 MGNFANRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP-----DGL 75 (482)
T ss_dssp -------CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEEC-----CCC
T ss_pred CCcccCCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECC-----CCC
Confidence 4433 44689999999999999999999999999999999999986655443321110001 1378999886 245
Q ss_pred CCCCCCCCCCCchhHHHHHHHHH-HhchHHHHHHHhhc-----CCCCeEEEECCCCcchHHHHHHcCCCeEEEechhHHH
Q 044823 79 PEGCENFDMLPSIDLAYNFLTSL-QKLQLPFENLFREQ-----TPQPCCIISDMCIPWTVDTAAKFNVPRIIFHGFSCFC 152 (497)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~-----~~~~D~vI~D~~~~~a~~~A~~lgIP~i~~~~~~~~~ 152 (497)
|.......... . +..+...+ ..+...++++++.. ..++|+||+|.++.|+..+|+++|||++.++++++..
T Consensus 76 p~~~~~~~~~~--~-~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~ 152 (482)
T 2pq6_A 76 TPMEGDGDVSQ--D-VPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACS 152 (482)
T ss_dssp C---------C--C-HHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHH
T ss_pred CCcccccCcch--h-HHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHH
Confidence 44100001011 1 22233333 34556666666643 2589999999999999999999999999999999887
Q ss_pred HHHHHHhhhhcccCCCCCC----------Cc-cccCCCCCCCcccccccCCCCCCC----chHHHHHHHHHHhcccccEE
Q 044823 153 LLCLDILRVSKVHENVSSD----------SE-YFKVPGFPHHIEFTKVQLPISPPT----DELKEFNEKILAADKKTYGV 217 (497)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~----------~~-~~~~P~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~ 217 (497)
...+.+++........+.. +. ...+|+++. ++..+++.++.. ..+..++....+..+.++++
T Consensus 153 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 229 (482)
T 2pq6_A 153 LLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKN---FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTI 229 (482)
T ss_dssp HHHHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCS---CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCE
T ss_pred HHHHHHHHHHHhcCCCCCccccccccccccCccccCCCCCC---CchHHCchhhccCCcccHHHHHHHHHHHhhccCCEE
Confidence 7665443321111111100 11 123566654 444555543322 23444455556667788899
Q ss_pred EecchhhhhHHHHHHHHhhcCCceEEeCcCcCC-CccchhhhhcC--CCCCCChhhhhhhhccCCCCeEEEEeeCCcccC
Q 044823 218 IINTFEELESASVKEYKNAKQGKVWCIGPVSLC-NKESLDKVERG--NKAAIDIPECLTWLDSQQPSSVVYVCLGSICNL 294 (497)
Q Consensus 218 l~~s~~~l~~~~~~~~~~~~~~~~~~vGp~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~ 294 (497)
++|++.+|+++++++++..+ +++++|||++.. ........... ...+..+.++.+||+.++++++|||||||....
T Consensus 230 l~nt~~~le~~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~ 308 (482)
T 2pq6_A 230 LLNTFNELESDVINALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVM 308 (482)
T ss_dssp EESSCGGGGHHHHHHHHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCC
T ss_pred EEcChHHHhHHHHHHHHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccC
Confidence 99999999999998888777 789999999753 11100000000 011223567899999987788999999999888
Q ss_pred CHhhHHHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCCccccccccCchhHH
Q 044823 295 TSSQLIELGLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPAVGGFLTHCGWNSSL 374 (497)
Q Consensus 295 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~ItHgG~gs~~ 374 (497)
+.+++.+++++|++.+++|||+++.....+.... +|+++.++. ++|+++++|+||.++|+|+++++||||||+||++
T Consensus 309 ~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~~-~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~ 385 (482)
T 2pq6_A 309 TPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVI--FSSEFTNEI-ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTT 385 (482)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGG--SCHHHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHH
T ss_pred CHHHHHHHHHHHHhcCCcEEEEEcCCcccccccc--CcHhHHHhc-CCCEEEEeecCHHHHhcCCCCCEEEecCCcchHH
Confidence 8888999999999999999999986421111111 567776655 5799999999999999999999999999999999
Q ss_pred HHHHhCCcEeccCCcccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHH
Q 044823 375 EGISAGVQMLTWPLFTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAK 454 (497)
Q Consensus 375 eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~ 454 (497)
||+++|||||++|+++||+.||+++++++|+|+.++ . .+++++|.++|+++|+|++ ++.||+||+
T Consensus 386 Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~-------------~~~~~~l~~~i~~ll~~~~-~~~~r~~a~ 450 (482)
T 2pq6_A 386 ESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-T-------------NVKREELAKLINEVIAGDK-GKKMKQKAM 450 (482)
T ss_dssp HHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-S-------------SCCHHHHHHHHHHHHTSHH-HHHHHHHHH
T ss_pred HHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-C-------------CCCHHHHHHHHHHHHcCCc-HHHHHHHHH
Confidence 999999999999999999999999954799999997 4 5899999999999998754 678999999
Q ss_pred HHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 044823 455 EFGELAKRALEEGGSSYNNIKFFHPRYH 482 (497)
Q Consensus 455 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 482 (497)
++++.+++++++||+|.+++++||+++.
T Consensus 451 ~l~~~~~~a~~~gGss~~~l~~~v~~~~ 478 (482)
T 2pq6_A 451 ELKKKAEENTRPGGCSYMNLNKVIKDVL 478 (482)
T ss_dssp HHHHHHHHHTSTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 9999999999999999999999999874
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=3.1e-61 Score=490.12 Aligned_cols=439 Identities=25% Similarity=0.383 Sum_probs=324.9
Q ss_pred CCCCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCe--EEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCC
Q 044823 1 MASETSNFHFILLPFLAQGHLIPMFDIARLLAQHGAT--ATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGL 78 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~--Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~ 78 (497)
|+..++++||+++|+|++||++|++.||+.|++|||+ ||+++++.+...+...... ....+++|+.++ +++
T Consensus 1 m~~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~--~~~~~i~~~~i~-----~gl 73 (456)
T 2c1x_A 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH--TMQCNIKSYDIS-----DGV 73 (456)
T ss_dssp ------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECC-----CCC
T ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc--cCCCceEEEeCC-----CCC
Confidence 7777788999999999999999999999999999766 5778877444333221100 012478998875 356
Q ss_pred CCCCCCCCCCCchhHHHHHHHHH-HhchHHHHHHHhhcCCCCeEEEECCCCcchHHHHHHcCCCeEEEechhHHHHHHHH
Q 044823 79 PEGCENFDMLPSIDLAYNFLTSL-QKLQLPFENLFREQTPQPCCIISDMCIPWTVDTAAKFNVPRIIFHGFSCFCLLCLD 157 (497)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~i~~~~~~~~~~~~~~ 157 (497)
|+..+... .....+..+.... ..+...+.+++++.+.++|+||+|.++.|+..+|+++|||++.++++++.....+.
T Consensus 74 p~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~ 151 (456)
T 2c1x_A 74 PEGYVFAG--RPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHV 151 (456)
T ss_dssp CTTCCCCC--CTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHH
T ss_pred CCcccccC--ChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHh
Confidence 55443211 1123333343333 23444555554432369999999999999999999999999999999887766544
Q ss_pred Hhhhhc---ccCC-CCC-CCccccCCCCCCCcccccccCCCCCCC----chHHHHHHHHHHhcccccEEEecchhhhhHH
Q 044823 158 ILRVSK---VHEN-VSS-DSEYFKVPGFPHHIEFTKVQLPISPPT----DELKEFNEKILAADKKTYGVIINTFEELESA 228 (497)
Q Consensus 158 ~~~~~~---~~~~-~~~-~~~~~~~P~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~ 228 (497)
+..... .... ... .....++|+++. ++.++++..+.. ..+..++.++.+..+.++++++|++.+++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~---~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~ 228 (456)
T 2c1x_A 152 YIDEIREKIGVSGIQGREDELLNFIPGMSK---VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDS 228 (456)
T ss_dssp THHHHHHHHCSSCCTTCTTCBCTTSTTCTT---CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHH
T ss_pred hhHHHHhccCCcccccccccccccCCCCCc---ccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHH
Confidence 332210 0000 011 112235778775 566666653321 2344555555556677889999999999998
Q ss_pred HHHHHHhhcCCceEEeCcCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCcccCCHhhHHHHHHHHHh
Q 044823 229 SVKEYKNAKQGKVWCIGPVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEA 308 (497)
Q Consensus 229 ~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~ 308 (497)
++..++..+ +++++|||+....... ....+.++.+||+.++++++|||||||....+.+++.+++++|+.
T Consensus 229 ~~~~~~~~~-~~~~~vGpl~~~~~~~---------~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~ 298 (456)
T 2c1x_A 229 LTNDLKSKL-KTYLNIGPFNLITPPP---------VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEA 298 (456)
T ss_dssp HHHHHHHHS-SCEEECCCHHHHC------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHhcC-CCEEEecCcccCcccc---------cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHh
Confidence 888777766 6899999997543211 001235688999988778899999999998888899999999999
Q ss_pred CCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCCccccccccCchhHHHHHHhCCcEeccCC
Q 044823 309 SKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPL 388 (497)
Q Consensus 309 ~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~ 388 (497)
.+++|||+++..... . +|+++.++. ++|+++.+|+||.++|+|+++++||||||+||++||+++|||||++|+
T Consensus 299 ~~~~~lw~~~~~~~~----~--l~~~~~~~~-~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~ 371 (456)
T 2c1x_A 299 SRVPFIWSLRDKARV----H--LPEGFLEKT-RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPF 371 (456)
T ss_dssp HTCCEEEECCGGGGG----G--SCTTHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred cCCeEEEEECCcchh----h--CCHHHHhhc-CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCC
Confidence 999999999865321 1 677776554 578999999999999999999999999999999999999999999999
Q ss_pred cccchhhHHHHHHHH-cceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhC
Q 044823 389 FTDQFCNEKLIVEVL-RIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFGELAKRALEEG 467 (497)
Q Consensus 389 ~~DQ~~na~~~~e~~-G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~ 467 (497)
+.||+.||++++ +. |+|+.++.. .++.++|.++|+++|+|++ ++.||+||+++++.++++..+|
T Consensus 372 ~~dQ~~Na~~l~-~~~g~g~~l~~~-------------~~~~~~l~~~i~~ll~~~~-~~~~r~~a~~l~~~~~~a~~~g 436 (456)
T 2c1x_A 372 FGDQRLNGRMVE-DVLEIGVRIEGG-------------VFTKSGLMSCFDQILSQEK-GKKLRENLRALRETADRAVGPK 436 (456)
T ss_dssp STTHHHHHHHHH-HTSCCEEECGGG-------------SCCHHHHHHHHHHHHHSHH-HHHHHHHHHHHHHHHHHHTSTT
T ss_pred hhhHHHHHHHHH-HHhCeEEEecCC-------------CcCHHHHHHHHHHHHCCCc-HHHHHHHHHHHHHHHHHhhhcC
Confidence 999999999996 77 999999765 6899999999999998754 7899999999999999999999
Q ss_pred CChHHHHHHHHHHHhh
Q 044823 468 GSSYNNIKFFHPRYHA 483 (497)
Q Consensus 468 g~~~~~~~~~~~~~~~ 483 (497)
|||.+++++||+++..
T Consensus 437 GsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 437 GSSTENFITLVDLVSK 452 (456)
T ss_dssp CHHHHHHHHHHHHHTS
T ss_pred CcHHHHHHHHHHHHHh
Confidence 9999999999998843
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=5.6e-61 Score=489.53 Aligned_cols=439 Identities=27% Similarity=0.434 Sum_probs=326.5
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhC--CCeEEEEeCCcchh-hhHHHHHHhhhcCCCeEEEEecCCccccCCCCC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQH--GATATIVTTPVNAA-RFKTVLARALQCRLQIRLIEIQFPWQEAGLPEG 81 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r--Gh~Vt~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~ 81 (497)
++++||+++|+|++||++|++.||+.|++| ||+|||++++.+.+ .+.+.+.+......+++|+.+|.. .++..
T Consensus 7 ~~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~----~~~~~ 82 (463)
T 2acv_A 7 NKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEV----EPPPQ 82 (463)
T ss_dssp HHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCC----CCCCG
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCC----CCCcc
Confidence 456899999999999999999999999999 99999999987532 223333221112357999998742 12221
Q ss_pred CCCCCCCCchhHHHHHHHHHHhchHHHHHHHhhc-CCCCeEEEECCCCcchHHHHHHcCCCeEEEechhHHHHHHHHHhh
Q 044823 82 CENFDMLPSIDLAYNFLTSLQKLQLPFENLFREQ-TPQPCCIISDMCIPWTVDTAAKFNVPRIIFHGFSCFCLLCLDILR 160 (497)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~D~vI~D~~~~~a~~~A~~lgIP~i~~~~~~~~~~~~~~~~~ 160 (497)
+... ..... +...+......+++++++. ..++|+||+|.++.|+..+|+++|||++.++++++..+..+++++
T Consensus 83 -~~~~---~~~~~--~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 156 (463)
T 2acv_A 83 -ELLK---SPEFY--ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLK 156 (463)
T ss_dssp -GGGG---SHHHH--HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGG
T ss_pred -cccC---CccHH--HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHH
Confidence 1011 11222 4444455666777777652 368999999999999999999999999999999998877766655
Q ss_pred hhcccCCCCCCCc---cccCCCC-CCCcccccccCCCCCCC-chHHHHHHHHHHhcccccEEEecchhhhhHHHHHHHHh
Q 044823 161 VSKVHENVSSDSE---YFKVPGF-PHHIEFTKVQLPISPPT-DELKEFNEKILAADKKTYGVIINTFEELESASVKEYKN 235 (497)
Q Consensus 161 ~~~~~~~~~~~~~---~~~~P~~-~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~ 235 (497)
.......+..... ...+|++ ++ +...+++..+.. ..+...+.+..+..+.+.++++|++.++++.....+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pg~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~ 233 (463)
T 2acv_A 157 NRQIEEVFDDSDRDHQLLNIPGISNQ---VPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYD 233 (463)
T ss_dssp GSCTTCCCCCSSGGGCEECCTTCSSC---EEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHH
T ss_pred hhcccCCCCCccccCceeECCCCCCC---CChHHCchhhcCCchHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHh
Confidence 4321111111222 4456777 54 444444421111 12333334445556778899999999999988777766
Q ss_pred hc--CCceEEeCcCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCcc-cCCHhhHHHHHHHHHhCCCC
Q 044823 236 AK--QGKVWCIGPVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSIC-NLTSSQLIELGLGLEASKKP 312 (497)
Q Consensus 236 ~~--~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~-~~~~~~~~~~~~al~~~~~~ 312 (497)
.. ++++++|||+......... ...+..+.++.+||+.++++++|||||||+. ..+.+++.+++++|+..+++
T Consensus 234 ~~~p~~~v~~vGpl~~~~~~~~~-----~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~ 308 (463)
T 2acv_A 234 HDEKIPPIYAVGPLLDLKGQPNP-----KLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVR 308 (463)
T ss_dssp HCTTSCCEEECCCCCCSSCCCBT-----TBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCE
T ss_pred ccccCCcEEEeCCCccccccccc-----ccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCc
Confidence 44 5799999999764320100 0000125789999999888889999999999 77888899999999999999
Q ss_pred eEEEEeCCCchhhhhhhhchhhHHHHhc-CCCeeeecccchHhhhccCCccccccccCchhHHHHHHhCCcEeccCCccc
Q 044823 313 FIWVSRVGNKLEELEKWLVEENFEERIK-GRGLLIRGWAPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFTD 391 (497)
Q Consensus 313 ~i~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~v~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~~D 391 (497)
|||+++.+.. . +|+++.++.. ++|+++.+|+||..+|+|+++++||||||+||++||+++|||||++|+++|
T Consensus 309 ~l~~~~~~~~-----~--l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~d 381 (463)
T 2acv_A 309 FLWSNSAEKK-----V--FPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAE 381 (463)
T ss_dssp EEEECCCCGG-----G--SCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTT
T ss_pred EEEEECCCcc-----c--CChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhh
Confidence 9999987411 1 6667765541 457888899999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHcceeEec-ccccccccccccccc--ccCHHHHHHHHHHHhc-CChhhHHHHHHHHHHHHHHHHHHhhC
Q 044823 392 QFCNEKLIVEVLRIGVSVG-VEVPMKFGEEEKIGV--LVKKEDVETAINILMD-DGEERDGRRRRAKEFGELAKRALEEG 467 (497)
Q Consensus 392 Q~~na~~~~e~~G~G~~l~-~~~~~~~~~~~~~~~--~~~~~~l~~ai~~vl~-~~~~~~~~~~~a~~~~~~~~~~~~~~ 467 (497)
|+.||+++++++|+|+.+. ..+ .+ .++.++|.++|+++|+ ++ .||+||+++++.+++++++|
T Consensus 382 Q~~Na~~lv~~~g~g~~l~~~~~----------~~~~~~~~~~l~~ai~~ll~~~~----~~r~~a~~l~~~~~~a~~~g 447 (463)
T 2acv_A 382 QQLNAFRLVKEWGVGLGLRVDYR----------KGSDVVAAEEIEKGLKDLMDKDS----IVHKKVQEMKEMSRNAVVDG 447 (463)
T ss_dssp HHHHHHHHHHTSCCEEESCSSCC----------TTCCCCCHHHHHHHHHHHTCTTC----THHHHHHHHHHHHHHHTSTT
T ss_pred hHHHHHHHHHHcCeEEEEecccC----------CCCccccHHHHHHHHHHHHhccH----HHHHHHHHHHHHHHHHHhcC
Confidence 9999999425999999993 110 01 4899999999999996 35 89999999999999999999
Q ss_pred CChHHHHHHHHHHHh
Q 044823 468 GSSYNNIKFFHPRYH 482 (497)
Q Consensus 468 g~~~~~~~~~~~~~~ 482 (497)
|+|.+++++||+++.
T Consensus 448 Gss~~~l~~~v~~~~ 462 (463)
T 2acv_A 448 GSSLISVGKLIDDIT 462 (463)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHhc
Confidence 999999999999874
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=8e-45 Score=368.40 Aligned_cols=395 Identities=16% Similarity=0.157 Sum_probs=266.8
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCCCC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGCEN 84 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~ 84 (497)
|+++||+|+++++.||++|++.||++|+++||+|+|++++...+.+.+. +++|+.++. .++.....
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~-----~~~~~~~~ 75 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA---------GATPVVYDS-----ILPKESNP 75 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCEEEECCC-----CSCCTTCT
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEecCc-----cccccccc
Confidence 5678999999999999999999999999999999999998654443332 678887753 22222111
Q ss_pred CCC-C-CchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCCcchHHHHHHcCCCeEEEechhHHHHHHHHHhhhh
Q 044823 85 FDM-L-PSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCIPWTVDTAAKFNVPRIIFHGFSCFCLLCLDILRVS 162 (497)
Q Consensus 85 ~~~-~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~ 162 (497)
... . .....+..+......+...+.+++++ .+||+||+|.+..|+..+|+++|||++.+++.+.........+...
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~ 153 (424)
T 2iya_A 76 EESWPEDQESAMGLFLDEAVRVLPQLEDAYAD--DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAV 153 (424)
T ss_dssp TCCCCSSHHHHHHHHHHHHHHHHHHHHHHTTT--SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGG
T ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccc
Confidence 000 1 11122222333334556677788877 8999999999888999999999999999987664211000000000
Q ss_pred cccCCCCCCCccccCCCCCCCcccccccCCCCCCC-chH---HHHHHHHHH----------hcccccEEEecchhhhhHH
Q 044823 163 KVHENVSSDSEYFKVPGFPHHIEFTKVQLPISPPT-DEL---KEFNEKILA----------ADKKTYGVIINTFEELESA 228 (497)
Q Consensus 163 ~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~-~~~---~~~~~~~~~----------~~~~~~~~l~~s~~~l~~~ 228 (497)
...+.........| .. . .....+... ..+ ...+..... ....++.+++++...++++
T Consensus 154 --~~~~~~~~~~~~~~---~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~ 224 (424)
T 2iya_A 154 --QDPTADRGEEAAAP---AG--T--GDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK 224 (424)
T ss_dssp --SCCCC----------------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT
T ss_pred --cccccccccccccc---cc--c--ccchhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC
Confidence 00000000000000 00 0 000000000 000 011111111 1113556788888888753
Q ss_pred HHHHHHhhcCCceEEeCcCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCcccCCHhhHHHHHHHHHh
Q 044823 229 SVKEYKNAKQGKVWCIGPVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEA 308 (497)
Q Consensus 229 ~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~ 308 (497)
...+++++++|||+.... .+..+|++..+++++|||++||......+.+..++++++.
T Consensus 225 -----~~~~~~~~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~ 282 (424)
T 2iya_A 225 -----GDTVGDNYTFVGPTYGDR-----------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDG 282 (424)
T ss_dssp -----GGGCCTTEEECCCCCCCC-----------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTT
T ss_pred -----ccCCCCCEEEeCCCCCCc-----------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhc
Confidence 245778999999985421 1123577655566799999999986667888899999998
Q ss_pred CCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCCccccccccCchhHHHHHHhCCcEeccCC
Q 044823 309 SKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPL 388 (497)
Q Consensus 309 ~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~ 388 (497)
.+.+++|.++.......+.. .++|+.+.+|+||..+|+++++ ||||||+||++||+++|||+|++|.
T Consensus 283 ~~~~~~~~~g~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~ 349 (424)
T 2iya_A 283 LDWHVVLSVGRFVDPADLGE-----------VPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQ 349 (424)
T ss_dssp CSSEEEEECCTTSCGGGGCS-----------CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCC
T ss_pred CCcEEEEEECCcCChHHhcc-----------CCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecC
Confidence 89999999876532211111 2569999999999999999998 9999999999999999999999999
Q ss_pred cccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCC
Q 044823 389 FTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFGELAKRALEEGG 468 (497)
Q Consensus 389 ~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~g 468 (497)
+.||+.||++++ +.|+|+.++.+ .+++++|.++|+++|+|+ .|+++++++++.+++. +
T Consensus 350 ~~dQ~~na~~l~-~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~~---~- 407 (424)
T 2iya_A 350 IAEQTMNAERIV-ELGLGRHIPRD-------------QVTAEKLREAVLAVASDP----GVAERLAAVRQEIREA---G- 407 (424)
T ss_dssp SHHHHHHHHHHH-HTTSEEECCGG-------------GCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHTS---C-
T ss_pred ccchHHHHHHHH-HCCCEEEcCcC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHhc---C-
Confidence 999999999995 99999999766 689999999999999987 8999999999987742 3
Q ss_pred ChHHHHHHHHHHHh
Q 044823 469 SSYNNIKFFHPRYH 482 (497)
Q Consensus 469 ~~~~~~~~~~~~~~ 482 (497)
+...+.+.|+++.
T Consensus 408 -~~~~~~~~i~~~~ 420 (424)
T 2iya_A 408 -GARAAADILEGIL 420 (424)
T ss_dssp -HHHHHHHHHHHHH
T ss_pred -cHHHHHHHHHHHH
Confidence 3345555666554
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=4.4e-44 Score=360.13 Aligned_cols=366 Identities=17% Similarity=0.108 Sum_probs=234.4
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCcccc--CCCCCC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEA--GLPEGC 82 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~--~~~~~~ 82 (497)
.+.|||+|+++|+.||++|+++||++|++|||+|+|++++.... .. ..++.+..+....... ..+...
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~----~~------~~g~~~~~~~~~~~~~~~~~~~~~ 89 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRA----VA------EAGLCAVDVSPGVNYAKLFVPDDT 89 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHH----HH------TTTCEEEESSTTCCSHHHHSCCC-
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhh----HH------hcCCeeEecCCchhHhhhcccccc
Confidence 46799999999999999999999999999999999999985432 21 1257777664221110 001110
Q ss_pred CCCCC----CCchhHHH-HHHHHHHhchHHHHHHHhhcCCCCeEEEECCCCcchHHHHHHcCCCeEEEechhHHHHHHHH
Q 044823 83 ENFDM----LPSIDLAY-NFLTSLQKLQLPFENLFREQTPQPCCIISDMCIPWTVDTAAKFNVPRIIFHGFSCFCLLCLD 157 (497)
Q Consensus 83 ~~~~~----~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~i~~~~~~~~~~~~~~ 157 (497)
..... ......+. .+..........+.+++++ ++||+||+|.+..++..+|+.+|||++.+.+.+........
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~ 167 (400)
T 4amg_A 90 DVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS--WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLG 167 (400)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHH
T ss_pred ccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchh
Confidence 00000 00011111 1122223445566777777 89999999999999999999999999986544322111000
Q ss_pred HhhhhcccCCCCCCCccccCCCCCCCcccccccCCCCCCCchHHHHHHHHHHhc----ccccEE-EecchhhhhHHHHHH
Q 044823 158 ILRVSKVHENVSSDSEYFKVPGFPHHIEFTKVQLPISPPTDELKEFNEKILAAD----KKTYGV-IINTFEELESASVKE 232 (497)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~-l~~s~~~l~~~~~~~ 232 (497)
.. ..+.+.+..+.. ...... .......... ..
T Consensus 168 ~~----------------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 204 (400)
T 4amg_A 168 AL----------------------------------------IRRAMSKDYERHGVTGEPTGSVRLTTTPPSVEA---LL 204 (400)
T ss_dssp HH----------------------------------------HHHHTHHHHHHTTCCCCCSCEEEEECCCHHHHH---TS
T ss_pred hH----------------------------------------HHHHHHHHHHHhCCCcccccchhhcccCchhhc---cC
Confidence 00 000111111110 001111 1111110000 00
Q ss_pred HHhhcCCceEEeCcCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCcccCC--HhhHHHHHHHHHhCC
Q 044823 233 YKNAKQGKVWCIGPVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSICNLT--SSQLIELGLGLEASK 310 (497)
Q Consensus 233 ~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~--~~~~~~~~~al~~~~ 310 (497)
......+....+++.... ....+.+|++..+++++|||||||+.... .+.+.++++++++.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~ 268 (400)
T 4amg_A 205 PEDRRSPGAWPMRYVPYN----------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVD 268 (400)
T ss_dssp CGGGCCTTCEECCCCCCC----------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSS
T ss_pred cccccCCcccCccccccc----------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccC
Confidence 000001122222222111 12344568888888889999999987644 467888999999999
Q ss_pred CCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCCccccccccCchhHHHHHHhCCcEeccCCcc
Q 044823 311 KPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFT 390 (497)
Q Consensus 311 ~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~~ 390 (497)
.+++|..+...... . . ..++|+.+.+|+||.++|+|+++ ||||||+||++||+++|||+|++|+++
T Consensus 269 ~~~v~~~~~~~~~~------~-~-----~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~ 334 (400)
T 4amg_A 269 AEFVLTLGGGDLAL------L-G-----ELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGS 334 (400)
T ss_dssp SEEEEECCTTCCCC------C-C-----CCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC--
T ss_pred ceEEEEecCccccc------c-c-----cCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcc
Confidence 99999987754321 1 1 12679999999999999999988 999999999999999999999999999
Q ss_pred cchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCCh
Q 044823 391 DQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFGELAKRALEEGGSS 470 (497)
Q Consensus 391 DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~g~~ 470 (497)
||+.||++++ +.|+|+.++.. +.+++ +|+++|+|+ +||+||+++++++++. .|
T Consensus 335 dQ~~na~~v~-~~G~g~~l~~~-------------~~~~~----al~~lL~d~----~~r~~a~~l~~~~~~~---~~-- 387 (400)
T 4amg_A 335 YQDTNRDVLT-GLGIGFDAEAG-------------SLGAE----QCRRLLDDA----GLREAALRVRQEMSEM---PP-- 387 (400)
T ss_dssp -CHHHHHHHH-HHTSEEECCTT-------------TCSHH----HHHHHHHCH----HHHHHHHHHHHHHHTS---CC--
T ss_pred cHHHHHHHHH-HCCCEEEcCCC-------------CchHH----HHHHHHcCH----HHHHHHHHHHHHHHcC---CC--
Confidence 9999999994 99999999866 56655 567888888 9999999999998854 43
Q ss_pred HHHHHHHHHHHh
Q 044823 471 YNNIKFFHPRYH 482 (497)
Q Consensus 471 ~~~~~~~~~~~~ 482 (497)
-..+.+.++++.
T Consensus 388 ~~~~a~~le~lA 399 (400)
T 4amg_A 388 PAETAAXLVALA 399 (400)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhh
Confidence 355667777764
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=7.2e-42 Score=345.53 Aligned_cols=383 Identities=14% Similarity=0.117 Sum_probs=249.1
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCCCCCCC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGCENFDM 87 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~ 87 (497)
|||+|++.++.||++|+++||++|+++||+|+|++++.... .+.. .+++|+.++.+... .+ +....
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~----~v~~-----~g~~~~~i~~~~~~-~~----~~~~~ 66 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAE----RLAE-----VGVPHVPVGPSARA-PI----QRAKP 66 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHH----HHHH-----TTCCEEECCC------------CCSC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHH----HHHH-----cCCeeeeCCCCHHH-Hh----hcccc
Confidence 68999999999999999999999999999999999985333 2222 26888888643211 11 11010
Q ss_pred CCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECC-CCcc--hHHHHHHcCCCeEEEechhHHHHHHHHHhhhhcc
Q 044823 88 LPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDM-CIPW--TVDTAAKFNVPRIIFHGFSCFCLLCLDILRVSKV 164 (497)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~-~~~~--a~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~ 164 (497)
.....+..+.. ......++++.+. ..+||+||+|. +..| +..+|+++|||++.+++++.+...
T Consensus 67 -~~~~~~~~~~~--~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~---------- 132 (415)
T 1iir_A 67 -LTAEDVRRFTT--EAIATQFDEIPAA-AEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS---------- 132 (415)
T ss_dssp -CCHHHHHHHHH--HHHHHHHHHHHHH-TTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC----------
T ss_pred -cchHHHHHHHH--HHHHHHHHHHHHH-hcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC----------
Confidence 11111111111 1122334444431 27999999998 6678 899999999999998877643210
Q ss_pred cCCCCCCCccccCCCCCCCcccccccCCCCC----CCch----HHHHHHHHHHhc------------ccccEEEecchhh
Q 044823 165 HENVSSDSEYFKVPGFPHHIEFTKVQLPISP----PTDE----LKEFNEKILAAD------------KKTYGVIINTFEE 224 (497)
Q Consensus 165 ~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~----~~~~----~~~~~~~~~~~~------------~~~~~~l~~s~~~ 224 (497)
.++|.....+.+..+...+.+ .... +...+....+.. ... .+++++...
T Consensus 133 ----------~~~p~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~ 201 (415)
T 1iir_A 133 ----------PYYPPPPLGEPSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPV 201 (415)
T ss_dssp ----------SSSCCCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTT
T ss_pred ----------cccCCccCCccccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChh
Confidence 011110000000000000000 0000 000011111110 111 356777776
Q ss_pred hhHHHHHHHHhhcCCceEEeCcCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCcccCCHhhHHHHHH
Q 044823 225 LESASVKEYKNAKQGKVWCIGPVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGL 304 (497)
Q Consensus 225 l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~ 304 (497)
+++. .+..+ ++++|||+..... +..+.++.+|++.++ ++||||+||.. ...+.+..+++
T Consensus 202 l~~~----~~~~~--~~~~vG~~~~~~~------------~~~~~~~~~~l~~~~--~~v~v~~Gs~~-~~~~~~~~~~~ 260 (415)
T 1iir_A 202 LAPL----QPTDL--DAVQTGAWILPDE------------RPLSPELAAFLDAGP--PPVYLGFGSLG-APADAVRVAID 260 (415)
T ss_dssp TSCC----CCCSS--CCEECCCCCCCCC------------CCCCHHHHHHHHTSS--CCEEEECC----CCHHHHHHHHH
T ss_pred hcCC----CcccC--CeEeeCCCccCcc------------cCCCHHHHHHHhhCC--CeEEEeCCCCC-CcHHHHHHHHH
Confidence 6531 01112 7899999865422 113578899998653 58999999987 56777888999
Q ss_pred HHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCCccccccccCchhHHHHHHhCCcEe
Q 044823 305 GLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQML 384 (497)
Q Consensus 305 al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~l 384 (497)
++++.+.+++|+++..... ... + ++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|
T Consensus 261 al~~~~~~~v~~~g~~~~~--~~~--~---------~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i 325 (415)
T 1iir_A 261 AIRAHGRRVILSRGWADLV--LPD--D---------GADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQI 325 (415)
T ss_dssp HHHHTTCCEEECTTCTTCC--CSS--C---------GGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEE
T ss_pred HHHHCCCeEEEEeCCCccc--ccC--C---------CCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEE
Confidence 9999999999998765321 001 1 458999999999999988777 999999999999999999999
Q ss_pred ccCCcccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHH
Q 044823 385 TWPLFTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFGELAKRAL 464 (497)
Q Consensus 385 ~~P~~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~~~ 464 (497)
++|.+.||+.||+++ ++.|+|+.++.. .+++++|.++|+++ +|+ .|+++++++++.++.
T Consensus 326 ~~p~~~dQ~~na~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~l-~~~----~~~~~~~~~~~~~~~-- 384 (415)
T 1iir_A 326 LLPQMADQPYYAGRV-AELGVGVAHDGP-------------IPTFDSLSAALATA-LTP----ETHARATAVAGTIRT-- 384 (415)
T ss_dssp ECCCSTTHHHHHHHH-HHHTSEEECSSS-------------SCCHHHHHHHHHHH-TSH----HHHHHHHHHHHHSCS--
T ss_pred ECCCCCccHHHHHHH-HHCCCcccCCcC-------------CCCHHHHHHHHHHH-cCH----HHHHHHHHHHHHHhh--
Confidence 999999999999999 599999999765 58999999999999 887 899999999888652
Q ss_pred hhCCChHHHHHHHHHHHhhccCccC
Q 044823 465 EEGGSSYNNIKFFHPRYHATADLRS 489 (497)
Q Consensus 465 ~~~g~~~~~~~~~~~~~~~~~~~~~ 489 (497)
..+...+.+.|+++........
T Consensus 385 ---~~~~~~~~~~i~~~~~~~~~~~ 406 (415)
T 1iir_A 385 ---DGAAVAARLLLDAVSREKPTVS 406 (415)
T ss_dssp ---CHHHHHHHHHHHHHHTC-----
T ss_pred ---cChHHHHHHHHHHHHhcccHHH
Confidence 3344667777777766554443
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=3e-40 Score=333.81 Aligned_cols=383 Identities=14% Similarity=0.087 Sum_probs=249.4
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCCCCCCC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGCENFDM 87 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~ 87 (497)
|||+|++.++.||++|+++||++|+++||+|+|++++...+.+... +++++.++.+... .... . ..
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~~~-~~~~-~--~~- 66 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQHM-MLQE-G--MP- 66 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCCEEECSCCGGG-CCCT-T--SC-
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCeeeecCCCHHH-HHhh-c--cc-
Confidence 6899999999999999999999999999999999998544333322 6888888643211 1111 0 00
Q ss_pred CCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECC-CCcc--hHHHHHHcCCCeEEEechhHHHHHHHHHhhhhcc
Q 044823 88 LPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDM-CIPW--TVDTAAKFNVPRIIFHGFSCFCLLCLDILRVSKV 164 (497)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~-~~~~--a~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~ 164 (497)
......+..+... .....++.+.+. ..+||+||+|. +.++ +..+|+.+|||++.+.+++.+..
T Consensus 67 ~~~~~~~~~~~~~--~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~----------- 132 (416)
T 1rrv_A 67 PPPPEEEQRLAAM--TVEMQFDAVPGA-AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA----------- 132 (416)
T ss_dssp CCCHHHHHHHHHH--HHHHHHHHHHHH-TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC-----------
T ss_pred cchhHHHHHHHHH--HHHHHHHHHHHH-hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC-----------
Confidence 0111111111111 112222222211 26999999997 4566 88999999999999877653321
Q ss_pred cCCCCCCCccccCC-CCCCCcccccccCCCCCCCc--------hHHHHHHHHHHh------------cccccEEEecchh
Q 044823 165 HENVSSDSEYFKVP-GFPHHIEFTKVQLPISPPTD--------ELKEFNEKILAA------------DKKTYGVIINTFE 223 (497)
Q Consensus 165 ~~~~~~~~~~~~~P-~~~~~~~~~~~~l~~~~~~~--------~~~~~~~~~~~~------------~~~~~~~l~~s~~ 223 (497)
..++| .++ +.....+..+.+... .+...+..+.+. .... .+++++..
T Consensus 133 ---------~~~~p~~~~--~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~ 200 (416)
T 1rrv_A 133 ---------SPHLPPAYD--EPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADP 200 (416)
T ss_dssp ---------CSSSCCCBC--SCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCT
T ss_pred ---------CcccCCCCC--CCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCc
Confidence 00011 100 000000000000000 000001111111 1122 46777777
Q ss_pred hhhHHHHHHHHhhcCCceEEeCcCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCccc-CCHhhHHHH
Q 044823 224 ELESASVKEYKNAKQGKVWCIGPVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSICN-LTSSQLIEL 302 (497)
Q Consensus 224 ~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~-~~~~~~~~~ 302 (497)
.++++ +..+ ++++|||+..+.. +..+.++.+|++.++ ++|||++||... ...+.+..+
T Consensus 201 ~l~~~-----~~~~--~~~~vG~~~~~~~------------~~~~~~~~~~l~~~~--~~v~v~~Gs~~~~~~~~~~~~~ 259 (416)
T 1rrv_A 201 VLAPL-----QPDV--DAVQTGAWLLSDE------------RPLPPELEAFLAAGS--PPVHIGFGSSSGRGIADAAKVA 259 (416)
T ss_dssp TTSCC-----CSSC--CCEECCCCCCCCC------------CCCCHHHHHHHHSSS--CCEEECCTTCCSHHHHHHHHHH
T ss_pred cccCC-----CCCC--CeeeECCCccCcc------------CCCCHHHHHHHhcCC--CeEEEecCCCCccChHHHHHHH
Confidence 77642 1111 7899999875422 113578889998653 589999999875 345677889
Q ss_pred HHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCCccccccccCchhHHHHHHhCCc
Q 044823 303 GLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQ 382 (497)
Q Consensus 303 ~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal~~GvP 382 (497)
+++++..+.+++|+++..... ... .++|+.+.+|+||.++|+++++ ||||||+||++||+++|||
T Consensus 260 ~~al~~~~~~~v~~~g~~~~~--~~~-----------~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P 324 (416)
T 1rrv_A 260 VEAIRAQGRRVILSRGWTELV--LPD-----------DRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVP 324 (416)
T ss_dssp HHHHHHTTCCEEEECTTTTCC--CSC-----------CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCC
T ss_pred HHHHHHCCCeEEEEeCCcccc--ccC-----------CCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCC
Confidence 999999999999998765321 001 1568999999999999988888 9999999999999999999
Q ss_pred EeccCCcccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHH
Q 044823 383 MLTWPLFTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFGELAKR 462 (497)
Q Consensus 383 ~l~~P~~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~ 462 (497)
+|++|.+.||+.||+++ ++.|+|+.++.. .+++++|.++|+++ +|+ .|+++++++++.++.
T Consensus 325 ~i~~p~~~dQ~~na~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~l-~~~----~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 325 QLVIPRNTDQPYFAGRV-AALGIGVAHDGP-------------TPTFESLSAALTTV-LAP----ETRARAEAVAGMVLT 385 (416)
T ss_dssp EEECCCSBTHHHHHHHH-HHHTSEEECSSS-------------CCCHHHHHHHHHHH-TSH----HHHHHHHHHTTTCCC
T ss_pred EEEccCCCCcHHHHHHH-HHCCCccCCCCC-------------CCCHHHHHHHHHHh-hCH----HHHHHHHHHHHHHhh
Confidence 99999999999999999 599999999765 58999999999999 887 899999999888663
Q ss_pred HHhhCCChHHHHHHHH-HHHhhccCccCCc
Q 044823 463 ALEEGGSSYNNIKFFH-PRYHATADLRSDV 491 (497)
Q Consensus 463 ~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~ 491 (497)
.++. .+.+.| +++.........+
T Consensus 386 ----~~~~--~~~~~i~e~~~~~~~~~~~~ 409 (416)
T 1rrv_A 386 ----DGAA--AAADLVLAAVGREKPAVPAL 409 (416)
T ss_dssp ----CHHH--HHHHHHHHHHHC--------
T ss_pred ----cCcH--HHHHHHHHHHhccCCCCcch
Confidence 2333 455555 7776665554443
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=8.2e-40 Score=330.63 Aligned_cols=378 Identities=13% Similarity=0.098 Sum_probs=256.8
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCCC-
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGCE- 83 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~- 83 (497)
..+|||+|++.++.||++|++.||++|+++||+|+|++++...+.+... ++.+..++.+ ++....
T Consensus 18 ~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~---------G~~~~~~~~~-----~~~~~~~ 83 (415)
T 3rsc_A 18 RHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA---------GATVVPYQSE-----IIDADAA 83 (415)
T ss_dssp -CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCS-----TTTCCHH
T ss_pred ccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc---------CCEEEecccc-----ccccccc
Confidence 4578999999999999999999999999999999999987544433322 6888887632 111100
Q ss_pred --CCCCCCchhHHHH-HHHHHHhchHHHHHHHhhcCCCCeEEEEC-CCCcchHHHHHHcCCCeEEEechhHHHHHHHHHh
Q 044823 84 --NFDMLPSIDLAYN-FLTSLQKLQLPFENLFREQTPQPCCIISD-MCIPWTVDTAAKFNVPRIIFHGFSCFCLLCLDIL 159 (497)
Q Consensus 84 --~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~D~vI~D-~~~~~a~~~A~~lgIP~i~~~~~~~~~~~~~~~~ 159 (497)
...... ...+.. +......+...+.+++++ ++||+||+| .+..++..+|+++|||++.+.+....... +...
T Consensus 84 ~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~--~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~ 159 (415)
T 3rsc_A 84 EVFGSDDL-GVRPHLMYLRENVSVLRATAEALDG--DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH-YSFS 159 (415)
T ss_dssp HHHHSSSS-CHHHHHHHHHHHHHHHHHHHHHHSS--SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-CCHH
T ss_pred hhhccccH-HHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-cccc
Confidence 000011 122222 333444556777888888 899999999 67788999999999999997644321000 0000
Q ss_pred hhhcccCCCCCCCccccCCCCCCCcccccccCCCCCCCchHHHHHHHHHHhc----------c-cccEEEecchhhhhHH
Q 044823 160 RVSKVHENVSSDSEYFKVPGFPHHIEFTKVQLPISPPTDELKEFNEKILAAD----------K-KTYGVIINTFEELESA 228 (497)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------~-~~~~~l~~s~~~l~~~ 228 (497)
.. ......+..|.. ...+...+..+.... . ..+..+......++
T Consensus 160 ~~----------~~~~~~~~~p~~-------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~-- 214 (415)
T 3rsc_A 160 QD----------MVTLAGTIDPLD-------------LPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQ-- 214 (415)
T ss_dssp HH----------HHHHHTCCCGGG-------------CHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTS--
T ss_pred cc----------cccccccCChhh-------------HHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccC--
Confidence 00 000000000000 000111111111111 1 11344444433333
Q ss_pred HHHHHHhhcCCceEEeCcCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCcccCCHhhHHHHHHHHHh
Q 044823 229 SVKEYKNAKQGKVWCIGPVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEA 308 (497)
Q Consensus 229 ~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~ 308 (497)
.....++.++.++||+.... .+..+|....+++++|||++||......+.+..++++++.
T Consensus 215 ---~~~~~~~~~~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~ 274 (415)
T 3rsc_A 215 ---IAGDTFDDRFVFVGPCFDDR-----------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDG 274 (415)
T ss_dssp ---TTGGGCCTTEEECCCCCCCC-----------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTT
T ss_pred ---CCcccCCCceEEeCCCCCCc-----------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhc
Confidence 23455678899999986432 1223355444556799999999987677788999999999
Q ss_pred CCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCCccccccccCchhHHHHHHhCCcEeccCC
Q 044823 309 SKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPL 388 (497)
Q Consensus 309 ~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~ 388 (497)
.+.+++|.++.+.....+.. .++|+.+.+|+||..+|+++++ ||||||.||++||+++|+|+|++|.
T Consensus 275 ~~~~~v~~~g~~~~~~~l~~-----------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~ 341 (415)
T 3rsc_A 275 QPWHVVMTLGGQVDPAALGD-----------LPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQ 341 (415)
T ss_dssp SSCEEEEECTTTSCGGGGCC-----------CCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCC
T ss_pred CCcEEEEEeCCCCChHHhcC-----------CCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCC
Confidence 89999999886533221111 2579999999999999999998 9999999999999999999999999
Q ss_pred cccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCC
Q 044823 389 FTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFGELAKRALEEGG 468 (497)
Q Consensus 389 ~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~g 468 (497)
..||+.||++++ +.|+|+.+..+ .+++++|.++|.++|+|+ .++++++++++.+.. ++
T Consensus 342 ~~~q~~~a~~l~-~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~----~~ 399 (415)
T 3rsc_A 342 SFDVQPMARRVD-QLGLGAVLPGE-------------KADGDTLLAAVGAVAADP----ALLARVEAMRGHVRR----AG 399 (415)
T ss_dssp SGGGHHHHHHHH-HHTCEEECCGG-------------GCCHHHHHHHHHHHHTCH----HHHHHHHHHHHHHHH----SC
T ss_pred cchHHHHHHHHH-HcCCEEEcccC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh----cC
Confidence 999999999995 99999999876 689999999999999997 899999999888764 33
Q ss_pred ChHHHHHHHHHHH
Q 044823 469 SSYNNIKFFHPRY 481 (497)
Q Consensus 469 ~~~~~~~~~~~~~ 481 (497)
+. ..+.+.|+++
T Consensus 400 ~~-~~~~~~i~~~ 411 (415)
T 3rsc_A 400 GA-ARAADAVEAY 411 (415)
T ss_dssp HH-HHHHHHHHHH
T ss_pred HH-HHHHHHHHHH
Confidence 33 4444455544
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=7.1e-39 Score=322.19 Aligned_cols=382 Identities=14% Similarity=0.136 Sum_probs=255.0
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCCCC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGCEN 84 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~ 84 (497)
|.++||+|++.++.||++|++.||++|+++||+|+|++++.. .+.++. .++.+..++.+..... ....
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~----~~~~~~-----~G~~~~~~~~~~~~~~---~~~~ 69 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLF----ADEVKA-----AGAEVVLYKSEFDTFH---VPEV 69 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHH----HHHHHH-----TTCEEEECCCGGGTSS---SSSS
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHH----HHHHHH-----cCCEEEeccccccccc---cccc
Confidence 345699999999999999999999999999999999998743 333332 2688888764321100 0000
Q ss_pred CCCCCchhHHHH-HHHHHHhchHHHHHHHhhcCCCCeEEEEC-CCCcchHHHHHHcCCCeEEEechhHHHHHHHHHhhhh
Q 044823 85 FDMLPSIDLAYN-FLTSLQKLQLPFENLFREQTPQPCCIISD-MCIPWTVDTAAKFNVPRIIFHGFSCFCLLCLDILRVS 162 (497)
Q Consensus 85 ~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~D~vI~D-~~~~~a~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~ 162 (497)
.........+.. +..........+.+.+++ ++||+||+| .+..++..+|+.+|||++.+.+....... +......
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~~ 146 (402)
T 3ia7_A 70 VKQEDAETQLHLVYVRENVAILRAAEEALGD--NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH-YSLFKEL 146 (402)
T ss_dssp SCCTTHHHHHHHHHHHHHHHHHHHHHHHHTT--CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT-BCHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc-ccccccc
Confidence 111111122222 333334556777888888 899999999 67788999999999999997643321100 0000000
Q ss_pred cccCCCCCCCccccCCCCCCCcccccccCCCCCCCchHHHHHHHHHHh----------cc-cccEEEecchhhhhHHHHH
Q 044823 163 KVHENVSSDSEYFKVPGFPHHIEFTKVQLPISPPTDELKEFNEKILAA----------DK-KTYGVIINTFEELESASVK 231 (497)
Q Consensus 163 ~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----------~~-~~~~~l~~s~~~l~~~~~~ 231 (497)
........|.. ...+...+...... .. ..+..+......++
T Consensus 147 ----------~~~~~~~~~~~-------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~----- 198 (402)
T 3ia7_A 147 ----------WKSNGQRHPAD-------------VEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQ----- 198 (402)
T ss_dssp ----------HHHHTCCCGGG-------------SHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGS-----
T ss_pred ----------cccccccChhh-------------HHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhC-----
Confidence 00000000000 00011111111110 01 11334443333333
Q ss_pred HHHhhcCCceEEeCcCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCcccCCHhhHHHHHHHHHhCCC
Q 044823 232 EYKNAKQGKVWCIGPVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEASKK 311 (497)
Q Consensus 232 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~ 311 (497)
.....++.++.++||+..... +...|+...+++++|||++||......+.+..++++++..+.
T Consensus 199 ~~~~~~~~~~~~vGp~~~~~~-----------------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~ 261 (402)
T 3ia7_A 199 PFAETFDERFAFVGPTLTGRD-----------------GQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPW 261 (402)
T ss_dssp TTGGGCCTTEEECCCCCCC---------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSC
T ss_pred CccccCCCCeEEeCCCCCCcc-----------------cCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCc
Confidence 233456788999999864321 223355444556799999999987777788999999999899
Q ss_pred CeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCCccccccccCchhHHHHHHhCCcEeccCC-cc
Q 044823 312 PFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPL-FT 390 (497)
Q Consensus 312 ~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~-~~ 390 (497)
+++|.++.+.....+.. .++|+.+.+|+|+..+|+++++ ||||||.||++||+++|+|+|++|. ..
T Consensus 262 ~~~~~~g~~~~~~~~~~-----------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~ 328 (402)
T 3ia7_A 262 HVVMAIGGFLDPAVLGP-----------LPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFAT 328 (402)
T ss_dssp EEEEECCTTSCGGGGCS-----------CCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCG
T ss_pred EEEEEeCCcCChhhhCC-----------CCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcc
Confidence 99999886533221111 2579999999999999999998 9999999999999999999999999 99
Q ss_pred cchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCCh
Q 044823 391 DQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFGELAKRALEEGGSS 470 (497)
Q Consensus 391 DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~g~~ 470 (497)
||+.||.+++ +.|+|+.+..+ .+++++|.+++.++|+|+ .++++++++++.+.. +++
T Consensus 329 ~q~~~a~~~~-~~g~g~~~~~~-------------~~~~~~l~~~~~~ll~~~----~~~~~~~~~~~~~~~----~~~- 385 (402)
T 3ia7_A 329 EAAPSAERVI-ELGLGSVLRPD-------------QLEPASIREAVERLAADS----AVRERVRRMQRDILS----SGG- 385 (402)
T ss_dssp GGHHHHHHHH-HTTSEEECCGG-------------GCSHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHT----SCH-
T ss_pred cHHHHHHHHH-HcCCEEEccCC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHhh----CCh-
Confidence 9999999995 99999999876 689999999999999997 889999888888653 333
Q ss_pred HHHHHHHHHHHh
Q 044823 471 YNNIKFFHPRYH 482 (497)
Q Consensus 471 ~~~~~~~~~~~~ 482 (497)
...+.+.++++.
T Consensus 386 ~~~~~~~i~~~~ 397 (402)
T 3ia7_A 386 PARAADEVEAYL 397 (402)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 344555555543
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=2.4e-39 Score=325.59 Aligned_cols=367 Identities=13% Similarity=0.034 Sum_probs=245.3
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCCCCCCC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGCENFDM 87 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~ 87 (497)
|||+|++.++.||++|++.||++|+++||+|+|++++... +.++. .++.|+.++.+.... .......
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~----~~v~~-----~g~~~~~l~~~~~~~---~~~~~~~- 67 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYV----ERCAE-----VGVPMVPVGRAVRAG---AREPGEL- 67 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGH----HHHHH-----TTCCEEECSSCSSGG---GSCTTCC-
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHH----HHHHH-----cCCceeecCCCHHHH---hccccCC-
Confidence 6899999999999999999999999999999999988433 33332 278888886432211 0000000
Q ss_pred CCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCCcch---HHHHHHcCCCeEEEechhHHHHHHHHHhhhhcc
Q 044823 88 LPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCIPWT---VDTAAKFNVPRIIFHGFSCFCLLCLDILRVSKV 164 (497)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~a---~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~ 164 (497)
.......+..........+.+++ .+||+||+|.....+ ..+|+.+|||++.+..++....+..
T Consensus 68 --~~~~~~~~~~~~~~~~~~l~~~~----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~-------- 133 (404)
T 3h4t_A 68 --PPGAAEVVTEVVAEWFDKVPAAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQ-------- 133 (404)
T ss_dssp --CTTCGGGHHHHHHHHHHHHHHHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGS--------
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHh----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChh--------
Confidence 00111112222233333343333 379999998765433 7899999999999877664210000
Q ss_pred cCCCCCCCccccCCCCCCCcccccccCCCCCCCchHHHHHHHHHHhcc-----------cccEEEecchhhhhHHHHHHH
Q 044823 165 HENVSSDSEYFKVPGFPHHIEFTKVQLPISPPTDELKEFNEKILAADK-----------KTYGVIINTFEELESASVKEY 233 (497)
Q Consensus 165 ~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~s~~~l~~~~~~~~ 233 (497)
+.. . ...... .....+...+++...... .....+.+....+.+.
T Consensus 134 ---------------~~~-~-~~~~~~---~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~----- 188 (404)
T 3h4t_A 134 ---------------SQA-E-RDMYNQ---GADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL----- 188 (404)
T ss_dssp ---------------CHH-H-HHHHHH---HHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC-----
T ss_pred ---------------HHH-H-HHHHHH---HHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC-----
Confidence 000 0 000000 000000000110000000 0111233333334321
Q ss_pred HhhcCCceEEeCcCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCcccCCHhhHHHHHHHHHhCCCCe
Q 044823 234 KNAKQGKVWCIGPVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEASKKPF 313 (497)
Q Consensus 234 ~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~ 313 (497)
.++++++.++|++..+... ..++++.+|++.. +++||||+||+.. ..+.+..++++++..+.++
T Consensus 189 -~~~~~~~~~~G~~~~~~~~------------~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~v 252 (404)
T 3h4t_A 189 -RPTDLGTVQTGAWILPDQR------------PLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRV 252 (404)
T ss_dssp -CTTCCSCCBCCCCCCCCCC------------CCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCE
T ss_pred -CCCCCCeEEeCccccCCCC------------CCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEE
Confidence 2355688899987654321 1467888999854 3589999999987 6778899999999999999
Q ss_pred EEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCCccccccccCchhHHHHHHhCCcEeccCCcccch
Q 044823 314 IWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFTDQF 393 (497)
Q Consensus 314 i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~~DQ~ 393 (497)
||+.+...... +. .++|+++.+|+||.++|+++++ ||||||+||+.||+++|+|+|++|.+.||+
T Consensus 253 v~~~g~~~~~~------~~-------~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~ 317 (404)
T 3h4t_A 253 VLSSGWAGLGR------ID-------EGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQP 317 (404)
T ss_dssp EEECTTTTCCC------SS-------CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred EEEeCCccccc------cc-------CCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHH
Confidence 99988653210 11 2579999999999999998888 999999999999999999999999999999
Q ss_pred hhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHH
Q 044823 394 CNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFGELAKRALEEGGSSYNN 473 (497)
Q Consensus 394 ~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~ 473 (497)
.||+++ ++.|+|+.+... .+++++|.++|+++|+ + .|+++++++++.++ . .+...
T Consensus 318 ~na~~~-~~~G~g~~l~~~-------------~~~~~~l~~ai~~ll~-~----~~~~~~~~~~~~~~-----~-~~~~~ 372 (404)
T 3h4t_A 318 YYAGRV-ADLGVGVAHDGP-------------TPTVESLSAALATALT-P----GIRARAAAVAGTIR-----T-DGTTV 372 (404)
T ss_dssp HHHHHH-HHHTSEEECSSS-------------SCCHHHHHHHHHHHTS-H----HHHHHHHHHHTTCC-----C-CHHHH
T ss_pred HHHHHH-HHCCCEeccCcC-------------CCCHHHHHHHHHHHhC-H----HHHHHHHHHHHHHh-----h-hHHHH
Confidence 999999 599999999876 6899999999999998 7 89999999998865 2 33455
Q ss_pred HHHHHHHHh
Q 044823 474 IKFFHPRYH 482 (497)
Q Consensus 474 ~~~~~~~~~ 482 (497)
+.+.|+++.
T Consensus 373 ~~~~i~~~~ 381 (404)
T 3h4t_A 373 AAKLLLEAI 381 (404)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555665554
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.9e-38 Score=319.88 Aligned_cols=384 Identities=17% Similarity=0.167 Sum_probs=249.3
Q ss_pred CCCCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCC
Q 044823 1 MASETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPE 80 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~ 80 (497)
|...|++|||+|++.++.||++|++.||++|+++||+|+++++....+ .+. ..++.++.++.. .+.
T Consensus 1 M~~~m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~----~~~-----~~g~~~~~~~~~-----~~~ 66 (430)
T 2iyf_A 1 MTTQTTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFAD----KVA-----ATGPRPVLYHST-----LPG 66 (430)
T ss_dssp -------CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHH----HHH-----TTSCEEEECCCC-----SCC
T ss_pred CCCccccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHH----HHH-----hCCCEEEEcCCc-----Ccc
Confidence 777777899999999999999999999999999999999999885432 222 136888876531 111
Q ss_pred CCCCCC--CCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCCcchHHHHHHcCCCeEEEechhHHHHHHHHH
Q 044823 81 GCENFD--MLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCIPWTVDTAAKFNVPRIIFHGFSCFCLLCLDI 158 (497)
Q Consensus 81 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~i~~~~~~~~~~~~~~~ 158 (497)
...... .......+..+..........+.+++++ .+||+||+|.+.+++..+|+.+|||++.+++...........
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~ 144 (430)
T 2iyf_A 67 PDADPEAWGSTLLDNVEPFLNDAIQALPQLADAYAD--DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEE 144 (430)
T ss_dssp TTSCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTT--SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHH
T ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhc--cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccc
Confidence 111100 0011122222222334456677788887 899999999887789999999999999987654210000000
Q ss_pred hhhhcccCCCCCCCccccCCCCCCCcccccccCCCCCCCchHHHHHHHHHH----------hcccccEEEecchhhhhHH
Q 044823 159 LRVSKVHENVSSDSEYFKVPGFPHHIEFTKVQLPISPPTDELKEFNEKILA----------ADKKTYGVIINTFEELESA 228 (497)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~s~~~l~~~ 228 (497)
+.... . ......+++. .+...+.++.. ....++.+++++...++..
T Consensus 145 ~~~~~-~------~~~~~~~~~~-----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~ 200 (430)
T 2iyf_A 145 VAEPM-W------REPRQTERGR-----------------AYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPH 200 (430)
T ss_dssp THHHH-H------HHHHHSHHHH-----------------HHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTT
T ss_pred cccch-h------hhhccchHHH-----------------HHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCC
Confidence 00000 0 0000000000 00000111111 1113566788887777642
Q ss_pred HHHHHHhhcCCc-eEEeCcCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCcccCCHhhHHHHHHHHH
Q 044823 229 SVKEYKNAKQGK-VWCIGPVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLE 307 (497)
Q Consensus 229 ~~~~~~~~~~~~-~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~ 307 (497)
...++++ +++|||.+.... +..+|.+..+++++||+++||......+.+..++++++
T Consensus 201 -----~~~~~~~~v~~vG~~~~~~~-----------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~ 258 (430)
T 2iyf_A 201 -----ADRVDEDVYTFVGACQGDRA-----------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFG 258 (430)
T ss_dssp -----GGGSCTTTEEECCCCC----------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHT
T ss_pred -----cccCCCccEEEeCCcCCCCC-----------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHh
Confidence 1345677 999998653211 01235544445679999999998555778888999998
Q ss_pred hC-CCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCCccccccccCchhHHHHHHhCCcEecc
Q 044823 308 AS-KKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTW 386 (497)
Q Consensus 308 ~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~l~~ 386 (497)
.. +.+++|.++.+..... +. ..++|+.+.+|+||..+|+++++ ||||||+||++||+++|+|+|++
T Consensus 259 ~~~~~~~~~~~G~~~~~~~-----l~------~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~ 325 (430)
T 2iyf_A 259 NLPGWHLVLQIGRKVTPAE-----LG------ELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAV 325 (430)
T ss_dssp TCTTEEEEEECC---CGGG-----GC------SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEEC
T ss_pred cCCCeEEEEEeCCCCChHH-----hc------cCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEEC
Confidence 85 8889898876532211 11 02569999999999999999998 99999999999999999999999
Q ss_pred CCcccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhh
Q 044823 387 PLFTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFGELAKRALEE 466 (497)
Q Consensus 387 P~~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~ 466 (497)
|..+||..||++++ +.|+|+.+..+ .++.++|.++|.++++|+ .++++++++++.++..
T Consensus 326 p~~~~q~~~a~~~~-~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~~--- 384 (430)
T 2iyf_A 326 PQAVDQFGNADMLQ-GLGVARKLATE-------------EATADLLRETALALVDDP----EVARRLRRIQAEMAQE--- 384 (430)
T ss_dssp CCSHHHHHHHHHHH-HTTSEEECCCC--------------CCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHHH---
T ss_pred CCccchHHHHHHHH-HcCCEEEcCCC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHhc---
Confidence 99999999999995 99999998766 589999999999999987 7888888887776643
Q ss_pred CCChHHHHHHHHHHHh
Q 044823 467 GGSSYNNIKFFHPRYH 482 (497)
Q Consensus 467 ~g~~~~~~~~~~~~~~ 482 (497)
+ + ...+.+.++++.
T Consensus 385 ~-~-~~~~~~~i~~~~ 398 (430)
T 2iyf_A 385 G-G-TRRAADLIEAEL 398 (430)
T ss_dssp C-H-HHHHHHHHHTTS
T ss_pred C-c-HHHHHHHHHHHh
Confidence 3 3 344444455443
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=4.5e-38 Score=320.26 Aligned_cols=382 Identities=14% Similarity=0.064 Sum_probs=239.4
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCC-C
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGC-E 83 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~-~ 83 (497)
..+|||+|++.++.||++|+++||++|+++||+|+|++++.. .+.++. .+++|+.++......++.... .
T Consensus 18 ~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~----~~~v~~-----~G~~~~~i~~~~~~~~~~~~~~~ 88 (441)
T 2yjn_A 18 GSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPAL----TEDITA-----AGLTAVPVGTDVDLVDFMTHAGH 88 (441)
T ss_dssp -CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGG----HHHHHT-----TTCCEEECSCCCCHHHHHHHTTH
T ss_pred CCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchh----HHHHHh-----CCCceeecCCccchHHHhhhhhc
Confidence 467899999999999999999999999999999999998743 333322 378888876431000000000 0
Q ss_pred CC------CCC----C---chhHHHHHHHHH----H-----h-chHHHHHHHhhcCCCCeEEEECCCCcchHHHHHHcCC
Q 044823 84 NF------DML----P---SIDLAYNFLTSL----Q-----K-LQLPFENLFREQTPQPCCIISDMCIPWTVDTAAKFNV 140 (497)
Q Consensus 84 ~~------~~~----~---~~~~~~~~~~~~----~-----~-~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgI 140 (497)
.. ... + ....+....... . . ....+.+++++ ++||+||+|.+..++..+|+.+||
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~aA~~lgi 166 (441)
T 2yjn_A 89 DIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK--WRPDLVIWEPLTFAAPIAAAVTGT 166 (441)
T ss_dssp HHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHHTC
T ss_pred ccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh--cCCCEEEecCcchhHHHHHHHcCC
Confidence 00 000 0 011111111111 1 1 34555666677 799999999987899999999999
Q ss_pred CeEEEechhHHHHHHHHHhhhhcccCCCCCCCccccCCCCCCCcccccccCCCCCCCchHHHHHHHHHHhccc-------
Q 044823 141 PRIIFHGFSCFCLLCLDILRVSKVHENVSSDSEYFKVPGFPHHIEFTKVQLPISPPTDELKEFNEKILAADKK------- 213 (497)
Q Consensus 141 P~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------- 213 (497)
|++.+...+.........+... ....|.. .....+.+.+.+..+....
T Consensus 167 P~v~~~~~~~~~~~~~~~~~~~-----------~~~~~~~--------------~~~~~~~~~l~~~~~~~g~~~~~~~~ 221 (441)
T 2yjn_A 167 PHARLLWGPDITTRARQNFLGL-----------LPDQPEE--------------HREDPLAEWLTWTLEKYGGPAFDEEV 221 (441)
T ss_dssp CEEEECSSCCHHHHHHHHHHHH-----------GGGSCTT--------------TCCCHHHHHHHHHHHHTTCCCCCGGG
T ss_pred CEEEEecCCCcchhhhhhhhhh-----------ccccccc--------------cccchHHHHHHHHHHHcCCCCCCccc
Confidence 9999865543321111000000 0001100 0001122233332222111
Q ss_pred --ccEEEecchhhhhHHHHHHHHhhcCCceEEeCcCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCc
Q 044823 214 --TYGVIINTFEELESASVKEYKNAKQGKVWCIGPVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSI 291 (497)
Q Consensus 214 --~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~ 291 (497)
....+......++++ ..++. ..+++... ..+.++.+|++..+++++|||++||.
T Consensus 222 ~~~~~~l~~~~~~~~~~------~~~~~--~~~~~~~~----------------~~~~~~~~~l~~~~~~~~v~v~~Gs~ 277 (441)
T 2yjn_A 222 VVGQWTIDPAPAAIRLD------TGLKT--VGMRYVDY----------------NGPSVVPEWLHDEPERRRVCLTLGIS 277 (441)
T ss_dssp TSCSSEEECSCGGGSCC------CCCCE--EECCCCCC----------------CSSCCCCGGGSSCCSSCEEEEEC---
T ss_pred cCCCeEEEecCccccCC------CCCCC--CceeeeCC----------------CCCcccchHhhcCCCCCEEEEECCCC
Confidence 111222222222210 01110 11222100 01244567987666667999999998
Q ss_pred ccC---CHhhHHHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCCcccccccc
Q 044823 292 CNL---TSSQLIELGLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPAVGGFLTHC 368 (497)
Q Consensus 292 ~~~---~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~ItHg 368 (497)
... ..+.+..++++++..+.++||+.+..... . +.. .++|+.+.+|+||.++|+.+++ |||||
T Consensus 278 ~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~----~--l~~------~~~~v~~~~~~~~~~ll~~ad~--~V~~~ 343 (441)
T 2yjn_A 278 SRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLE----G--VAN------IPDNVRTVGFVPMHALLPTCAA--TVHHG 343 (441)
T ss_dssp -------CCSTTTTHHHHHTSSSEEEECCCTTTTS----S--CSS------CCSSEEECCSCCHHHHGGGCSE--EEECC
T ss_pred cccccChHHHHHHHHHHHHcCCCEEEEEECCcchh----h--hcc------CCCCEEEecCCCHHHHHhhCCE--EEECC
Confidence 864 34667788899998999999998854321 0 110 2569999999999999988888 99999
Q ss_pred CchhHHHHHHhCCcEeccCCcccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHH
Q 044823 369 GWNSSLEGISAGVQMLTWPLFTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDG 448 (497)
Q Consensus 369 G~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~ 448 (497)
|+||++||+++|||+|++|...||+.||++++ +.|+|+.++.. .+++++|.++|.++|+|+ .
T Consensus 344 G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~-~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~ 405 (441)
T 2yjn_A 344 GPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQ-EFGAGIALPVP-------------ELTPDQLRESVKRVLDDP----A 405 (441)
T ss_dssp CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHH-HHTSEEECCTT-------------TCCHHHHHHHHHHHHHCH----H
T ss_pred CHHHHHHHHHhCCCEEEeCCcccHHHHHHHHH-HcCCEEEcccc-------------cCCHHHHHHHHHHHhcCH----H
Confidence 99999999999999999999999999999994 99999999866 689999999999999987 8
Q ss_pred HHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhh
Q 044823 449 RRRRAKEFGELAKRALEEGGSSYNNIKFFHPRYHA 483 (497)
Q Consensus 449 ~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 483 (497)
++++++++++.++. .++ ...+.+.|+++..
T Consensus 406 ~~~~~~~~~~~~~~----~~~-~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 406 HRAGAARMRDDMLA----EPS-PAEVVGICEELAA 435 (441)
T ss_dssp HHHHHHHHHHHHHT----SCC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc----CCC-HHHHHHHHHHHHH
Confidence 99999999988763 233 4555566666543
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=4.5e-37 Score=307.31 Aligned_cols=356 Identities=14% Similarity=0.060 Sum_probs=243.2
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCcccc-------CCCC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEA-------GLPE 80 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~-------~~~~ 80 (497)
|||++++.++.||++|++.||++|+++||+|++++++... +.+.. .++.++.++.+.... +.+.
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~----~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMG----PVVTG-----VGLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGH----HHHHH-----TTCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHH----HHHHh-----CCCEEEEeCCcchHHHHhhhcccCcc
Confidence 6899999999999999999999999999999999987433 22222 267888775422000 0110
Q ss_pred CCCCCCCCCchhHH----HH-HHHHHHhchHHHHHHHhhcCCCCeEEEECCCCcchHHHHHHcCCCeEEEechhHHHHHH
Q 044823 81 GCENFDMLPSIDLA----YN-FLTSLQKLQLPFENLFREQTPQPCCIISDMCIPWTVDTAAKFNVPRIIFHGFSCFCLLC 155 (497)
Q Consensus 81 ~~~~~~~~~~~~~~----~~-~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~i~~~~~~~~~~~~ 155 (497)
.. . ...... .. +..........+.+++++ .+||+||+|.+..++..+|+.+|||++.+...+..
T Consensus 72 ~~----~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~---- 140 (384)
T 2p6p_A 72 AI----P-SDPVAQARFTGRWFARMAASSLPRMLDFSRA--WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD---- 140 (384)
T ss_dssp CC----C-CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC----
T ss_pred cc----C-cchHHHHHHHHHHHHhhHHHHHHHHHHHHhc--cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc----
Confidence 00 0 110111 11 111222345566677777 79999999988888899999999999986432100
Q ss_pred HHHhhhhcccCCCCCCCccccCCCCCCCcccccccCCCCCCCchHHHHHHHHHHhc-----ccccEEEecchhhhhHHHH
Q 044823 156 LDILRVSKVHENVSSDSEYFKVPGFPHHIEFTKVQLPISPPTDELKEFNEKILAAD-----KKTYGVIINTFEELESASV 230 (497)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~s~~~l~~~~~ 230 (497)
. ..+. ..+...+.+..... ..+..++.++...++.+
T Consensus 141 ------------------~---~~~~----------------~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-- 181 (384)
T 2p6p_A 141 ------------------A---DGIH----------------PGADAELRPELSELGLERLPAPDLFIDICPPSLRPA-- 181 (384)
T ss_dssp ------------------C---TTTH----------------HHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT--
T ss_pred ------------------c---chhh----------------HHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC--
Confidence 0 0000 00111111111111 11445777777666532
Q ss_pred HHHHhhcC-CceEEeCcCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCcccC-----CHhhHHHHHH
Q 044823 231 KEYKNAKQ-GKVWCIGPVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSICNL-----TSSQLIELGL 304 (497)
Q Consensus 231 ~~~~~~~~-~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~-----~~~~~~~~~~ 304 (497)
..++ .++.+++ . . .+.++.+|++..+++++|||++||.... ..+.+..+++
T Consensus 182 ----~~~~~~~~~~~~-~---~---------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~ 238 (384)
T 2p6p_A 182 ----NAAPARMMRHVA-T---S---------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAK 238 (384)
T ss_dssp ----TSCCCEECCCCC-C---C---------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHH
T ss_pred ----CCCCCCceEecC-C---C---------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHH
Confidence 1122 2233332 1 0 0234456887645567999999998864 4577889999
Q ss_pred HHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCCccccccccCchhHHHHHHhCCcEe
Q 044823 305 GLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQML 384 (497)
Q Consensus 305 al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~l 384 (497)
++++.+.+++|+.+... . +.+.. .++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|
T Consensus 239 al~~~~~~~~~~~g~~~---------~-~~l~~--~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v 303 (384)
T 2p6p_A 239 DLVRWDVELIVAAPDTV---------A-EALRA--EVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQL 303 (384)
T ss_dssp HHHTTTCEEEEECCHHH---------H-HHHHH--HCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEE
T ss_pred HHhcCCcEEEEEeCCCC---------H-HhhCC--CCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEE
Confidence 99999999999987421 1 11111 2679999 99999999998888 999999999999999999999
Q ss_pred ccCCcccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHH
Q 044823 385 TWPLFTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFGELAKRAL 464 (497)
Q Consensus 385 ~~P~~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~~~ 464 (497)
++|...||+.||.++ ++.|+|+.++.. .+++++|.++|.++|+|+ .++++++++++.++..
T Consensus 304 ~~p~~~dq~~~a~~~-~~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~~- 364 (384)
T 2p6p_A 304 LIPKGSVLEAPARRV-ADYGAAIALLPG-------------EDSTEAIADSCQELQAKD----TYARRAQDLSREISGM- 364 (384)
T ss_dssp ECCCSHHHHHHHHHH-HHHTSEEECCTT-------------CCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHTS-
T ss_pred EccCcccchHHHHHH-HHCCCeEecCcC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHhC-
Confidence 999999999999999 599999998765 589999999999999987 8999999999988743
Q ss_pred hhCCChHHHHHHHHHHHhh
Q 044823 465 EEGGSSYNNIKFFHPRYHA 483 (497)
Q Consensus 465 ~~~g~~~~~~~~~~~~~~~ 483 (497)
+ + ...+.+.|+++..
T Consensus 365 --~-~-~~~~~~~i~~~~~ 379 (384)
T 2p6p_A 365 --P-L-PATVVTALEQLAH 379 (384)
T ss_dssp --C-C-HHHHHHHHHHHHH
T ss_pred --C-C-HHHHHHHHHHHhh
Confidence 3 3 3455555555543
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=1e-35 Score=298.87 Aligned_cols=351 Identities=14% Similarity=0.098 Sum_probs=217.5
Q ss_pred CCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCC--
Q 044823 4 ETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEG-- 81 (497)
Q Consensus 4 ~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~-- 81 (497)
+..+|||+|++.++.||++|++.||++|+++||+|++++++...+ .+.. .++.++.++.+.....+...
T Consensus 12 ~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~----~~~~-----~G~~~~~~~~~~~~~~~~~~~~ 82 (398)
T 4fzr_A 12 RGSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGP----TVTG-----AGLPFAPTCPSLDMPEVLSWDR 82 (398)
T ss_dssp ---CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHH----HHHH-----TTCCEEEEESSCCHHHHHSBCT
T ss_pred CCCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHH----HHHh-----CCCeeEecCCccchHhhhhhhc
Confidence 356799999999999999999999999999999999999874333 3322 26778777532110000000
Q ss_pred CCCCCCC--CchhHHH---H-HHHHHHhchHHHHHHHhhcCCCCeEEEECCCCcchHHHHHHcCCCeEEEechhHHHHHH
Q 044823 82 CENFDML--PSIDLAY---N-FLTSLQKLQLPFENLFREQTPQPCCIISDMCIPWTVDTAAKFNVPRIIFHGFSCFCLLC 155 (497)
Q Consensus 82 ~~~~~~~--~~~~~~~---~-~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~i~~~~~~~~~~~~ 155 (497)
....... ....... . +......+...+.+++++ ++||+|++|...+++..+|+.+|||++.+..........
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~ 160 (398)
T 4fzr_A 83 EGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER--WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELI 160 (398)
T ss_dssp TSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHH
T ss_pred cCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhh
Confidence 0000000 0001111 1 112223455677788888 899999999888889999999999999865442111000
Q ss_pred HHHhhhhcccCCCCCCCccccCCCCCCCcccccccCCCCCCCchHHHHHHHHHHhc-----ccccEEEecchhhhhHHHH
Q 044823 156 LDILRVSKVHENVSSDSEYFKVPGFPHHIEFTKVQLPISPPTDELKEFNEKILAAD-----KKTYGVIINTFEELESASV 230 (497)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~s~~~l~~~~~ 230 (497)
.. .....+....... ......+......+...
T Consensus 161 ~~-----------------------------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 197 (398)
T 4fzr_A 161 KS-----------------------------------------AGVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQ-- 197 (398)
T ss_dssp HH-----------------------------------------HHHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC----
T ss_pred hH-----------------------------------------HHHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCC--
Confidence 00 0000111111100 01112222222222211
Q ss_pred HHHHhhcCCceEEeCcCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCcccC--------CHhhHHHH
Q 044823 231 KEYKNAKQGKVWCIGPVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSICNL--------TSSQLIEL 302 (497)
Q Consensus 231 ~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~--------~~~~~~~~ 302 (497)
.......+.++++.. .+.++..|+...+++++|||++||.... ..+.+..+
T Consensus 198 ---~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~ 256 (398)
T 4fzr_A 198 ---PKPGTTKMRYVPYNG------------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQAL 256 (398)
T ss_dssp -----CCCEECCCCCCCC------------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHH
T ss_pred ---CCCCCCCeeeeCCCC------------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHH
Confidence 000001111221110 1233455766555567999999999753 34678899
Q ss_pred HHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCCccccccccCchhHHHHHHhCCc
Q 044823 303 GLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQ 382 (497)
Q Consensus 303 ~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal~~GvP 382 (497)
++++++.+.+++|+.+..... . +. ..++|+.+.+|+|+..+|+++++ ||||||.||++||+++|+|
T Consensus 257 ~~al~~~~~~~v~~~~~~~~~-~-----l~------~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P 322 (398)
T 4fzr_A 257 SQELPKLGFEVVVAVSDKLAQ-T-----LQ------PLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVP 322 (398)
T ss_dssp HHHGGGGTCEEEECCCC--------------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCC
T ss_pred HHHHHhCCCEEEEEeCCcchh-h-----hc------cCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCC
Confidence 999999999999998765311 1 11 12679999999999999999998 9999999999999999999
Q ss_pred EeccCCcccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHH
Q 044823 383 MLTWPLFTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFGELAK 461 (497)
Q Consensus 383 ~l~~P~~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~ 461 (497)
+|++|...||+.||.++ ++.|+|+.++.. .+++++|.++|.++|+|+ .+++++++.++.++
T Consensus 323 ~v~~p~~~~q~~~a~~~-~~~g~g~~~~~~-------------~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~ 383 (398)
T 4fzr_A 323 QVSVPVIAEVWDSARLL-HAAGAGVEVPWE-------------QAGVESVLAACARIRDDS----SYVGNARRLAAEMA 383 (398)
T ss_dssp EEECCCSGGGHHHHHHH-HHTTSEEECC--------------------CHHHHHHHHHHCT----HHHHHHHHHHHHHT
T ss_pred EEecCCchhHHHHHHHH-HHcCCEEecCcc-------------cCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHH
Confidence 99999999999999999 599999999876 689999999999999998 88999988888865
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=2.3e-34 Score=288.98 Aligned_cols=364 Identities=14% Similarity=0.117 Sum_probs=236.1
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCC------
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGL------ 78 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~------ 78 (497)
.++|||+|++.++.||++|++.||++|.++||+|+++++ ...+.+.. .++.++.++.+......
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~ 87 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA---------AGLEVVDVAPDYSAVKVFEQVAK 87 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT---------TTCEEEESSTTCCHHHHHHHHHH
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh---------CCCeeEecCCccCHHHHhhhccc
Confidence 456899999999999999999999999999999999998 44433322 37888887632100000
Q ss_pred --C---CCCCCCCCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCCcchHHHHHHcCCCeEEEechhHHHH
Q 044823 79 --P---EGCENFDMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCIPWTVDTAAKFNVPRIIFHGFSCFCL 153 (497)
Q Consensus 79 --~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~i~~~~~~~~~~ 153 (497)
+ .................+......+...+.+++++ ++||+||+|...+++..+|+.+|||++..........
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~~ 165 (398)
T 3oti_A 88 DNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDD--YRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRTR 165 (398)
T ss_dssp HCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCCT
T ss_pred CCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCcc
Confidence 0 00000000001122222233344667788888888 8999999998888899999999999998643311000
Q ss_pred HHHHHhhhhcccCCCCCCCccccCCCCCCCcccccccCCCCCCCchHHHHHHHHHHhcccccEEEecchhhhhHHHHHHH
Q 044823 154 LCLDILRVSKVHENVSSDSEYFKVPGFPHHIEFTKVQLPISPPTDELKEFNEKILAADKKTYGVIINTFEELESASVKEY 233 (497)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~ 233 (497)
.+.. ...+ .+...+.++.-........+......+..+. .
T Consensus 166 -------------------------~~~~----~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 205 (398)
T 3oti_A 166 -------------------------GMHR----SIAS--------FLTDLMDKHQVSLPEPVATIESFPPSLLLEA---E 205 (398)
T ss_dssp -------------------------THHH----HHHT--------TCHHHHHHTTCCCCCCSEEECSSCGGGGTTS---C
T ss_pred -------------------------chhh----HHHH--------HHHHHHHHcCCCCCCCCeEEEeCCHHHCCCC---C
Confidence 0000 0000 0011111100000011122222222221100 0
Q ss_pred HhhcCCceEEeCcCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCcccC--CHhhHHHHHHHHHhCCC
Q 044823 234 KNAKQGKVWCIGPVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSICNL--TSSQLIELGLGLEASKK 311 (497)
Q Consensus 234 ~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~--~~~~~~~~~~al~~~~~ 311 (497)
...++ +.++ |. . .+....+|+...+++++|||++||.... ..+.+..+++++++.+.
T Consensus 206 ~~~~~--~~~~-~~---~---------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~ 264 (398)
T 3oti_A 206 PEGWF--MRWV-PY---G---------------GGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDA 264 (398)
T ss_dssp CCSBC--CCCC-CC---C---------------CCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSS
T ss_pred CCCCC--cccc-CC---C---------------CCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCC
Confidence 00000 1111 00 0 1233445766555667999999999653 56778899999999999
Q ss_pred CeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCCccccccccCchhHHHHHHhCCcEeccCCccc
Q 044823 312 PFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFTD 391 (497)
Q Consensus 312 ~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~~D 391 (497)
+++|+.++.... . +. ..++|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...|
T Consensus 265 ~~v~~~g~~~~~-~-----l~------~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~d 330 (398)
T 3oti_A 265 DFVLALGDLDIS-P-----LG------TLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRD 330 (398)
T ss_dssp EEEEECTTSCCG-G-----GC------SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTC
T ss_pred EEEEEECCcChh-h-----hc------cCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCch
Confidence 999998775421 1 11 02579999999999999999988 9999999999999999999999999999
Q ss_pred chhhH--HHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCC
Q 044823 392 QFCNE--KLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFGELAKRALEEGGS 469 (497)
Q Consensus 392 Q~~na--~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~g~ 469 (497)
|+.|| .++ ++.|+|+.++.. ..+++.|. ++|+|+ .++++++++++.++. . .
T Consensus 331 q~~~a~~~~~-~~~g~g~~~~~~-------------~~~~~~l~----~ll~~~----~~~~~~~~~~~~~~~----~-~ 383 (398)
T 3oti_A 331 QFQHTAREAV-SRRGIGLVSTSD-------------KVDADLLR----RLIGDE----SLRTAAREVREEMVA----L-P 383 (398)
T ss_dssp CSSCTTHHHH-HHHTSEEECCGG-------------GCCHHHHH----HHHHCH----HHHHHHHHHHHHHHT----S-C
T ss_pred hHHHHHHHHH-HHCCCEEeeCCC-------------CCCHHHHH----HHHcCH----HHHHHHHHHHHHHHh----C-C
Confidence 99999 999 599999999876 57888887 788888 899999999988763 2 3
Q ss_pred hHHHHHHHHHHHh
Q 044823 470 SYNNIKFFHPRYH 482 (497)
Q Consensus 470 ~~~~~~~~~~~~~ 482 (497)
+...+.+.++++.
T Consensus 384 ~~~~~~~~l~~l~ 396 (398)
T 3oti_A 384 TPAETVRRIVERI 396 (398)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh
Confidence 3455556666553
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=8.7e-34 Score=284.13 Aligned_cols=363 Identities=12% Similarity=0.120 Sum_probs=233.2
Q ss_pred CcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEe-cCCccccC-----CCC
Q 044823 7 NFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEI-QFPWQEAG-----LPE 80 (497)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i-~~~~~~~~-----~~~ 80 (497)
+|||+|++.++.||++|++.|+++|+++||+|++++++. +.+.+.. .++.++.+ +.+...+. .+.
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~----~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPE----LQATAHG-----AGLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHH----HHHHHHH-----BTCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChh----hHHHHHh-----CCCceeeecCCccchhhhhhhcccc
Confidence 479999999999999999999999999999999999863 3333322 26777776 32111000 000
Q ss_pred CCCCCCCCCchhHHHHHHHHHHhc-------hHHHHHHHhhcCCCCeEEEECCCCcchHHHHHHcCCCeEEEechhHHHH
Q 044823 81 GCENFDMLPSIDLAYNFLTSLQKL-------QLPFENLFREQTPQPCCIISDMCIPWTVDTAAKFNVPRIIFHGFSCFCL 153 (497)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~i~~~~~~~~~~ 153 (497)
................+......+ ...+.+++++ ++||+||+|.+.+++..+|+.+|||++.+........
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~ 149 (391)
T 3tsa_A 72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA--WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPTA 149 (391)
T ss_dssp CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCTT
T ss_pred cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh--cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcccc
Confidence 000000000111111222222234 6677888888 8999999998878888999999999998653321100
Q ss_pred HHHHHhhhhcccCCCCCCCccccCCCCCCCcccccccCCCCCCCchHHHHHHHHHHhcc-----cccEEEecchhhhhHH
Q 044823 154 LCLDILRVSKVHENVSSDSEYFKVPGFPHHIEFTKVQLPISPPTDELKEFNEKILAADK-----KTYGVIINTFEELESA 228 (497)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~s~~~l~~~ 228 (497)
.. +. .....++.+...... .....+......++.
T Consensus 150 ~~------------------------~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 188 (391)
T 3tsa_A 150 GP------------------------FS----------------DRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQA- 188 (391)
T ss_dssp TH------------------------HH----------------HHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSC-
T ss_pred cc------------------------cc----------------chHHHHHHHHHHHcCCCCCCCCceEEEecChhhcC-
Confidence 00 00 001111221111111 012223222222221
Q ss_pred HHHHHHhhcCCceEEeCcCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCccc--CC-HhhHHHHHHH
Q 044823 229 SVKEYKNAKQGKVWCIGPVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSICN--LT-SSQLIELGLG 305 (497)
Q Consensus 229 ~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~--~~-~~~~~~~~~a 305 (497)
........+.++ |.. .+.....|+...+++++||+++||... .. .+.+..++++
T Consensus 189 ----~~~~~~~~~~~~-p~~------------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~ 245 (391)
T 3tsa_A 189 ----SDAPQGAPVQYV-PYN------------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA 245 (391)
T ss_dssp ----TTSCCCEECCCC-CCC------------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH
T ss_pred ----CCCCccCCeeee-cCC------------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh
Confidence 000001111222 110 122334577655567899999999854 23 6778888888
Q ss_pred HHhC-CCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCCccccccccCchhHHHHHHhCCcEe
Q 044823 306 LEAS-KKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQML 384 (497)
Q Consensus 306 l~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~l 384 (497)
++. +.+++|..++.... . +. ..++|+.+.+|+|+..+|+++++ ||||||.||++||+++|+|+|
T Consensus 246 -~~~p~~~~v~~~~~~~~~-~-----l~------~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v 310 (391)
T 3tsa_A 246 -TELPGVEAVIAVPPEHRA-L-----LT------DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQL 310 (391)
T ss_dssp -HTSTTEEEEEECCGGGGG-G-----CT------TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEE
T ss_pred -ccCCCeEEEEEECCcchh-h-----cc------cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEE
Confidence 877 78899988764311 1 21 12579999999999999988888 999999999999999999999
Q ss_pred ccCCcccchhhHHHHHHHHcceeEecc--ccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHH
Q 044823 385 TWPLFTDQFCNEKLIVEVLRIGVSVGV--EVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFGELAKR 462 (497)
Q Consensus 385 ~~P~~~DQ~~na~~~~e~~G~G~~l~~--~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~ 462 (497)
++|...||+.|+.++ ++.|+|+.+.. . ..++++|.+++.++|+|+ .++++++++++.+..
T Consensus 311 ~~p~~~~q~~~a~~~-~~~g~g~~~~~~~~-------------~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~~ 372 (391)
T 3tsa_A 311 VLPQYFDQFDYARNL-AAAGAGICLPDEQA-------------QSDHEQFTDSIATVLGDT----GFAAAAIKLSDEITA 372 (391)
T ss_dssp ECCCSTTHHHHHHHH-HHTTSEEECCSHHH-------------HTCHHHHHHHHHHHHTCT----HHHHHHHHHHHHHHT
T ss_pred ecCCcccHHHHHHHH-HHcCCEEecCcccc-------------cCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHc
Confidence 999999999999999 59999999987 5 579999999999999998 888888888887653
Q ss_pred HHhhCCChHHHHHHHHHHHh
Q 044823 463 ALEEGGSSYNNIKFFHPRYH 482 (497)
Q Consensus 463 ~~~~~g~~~~~~~~~~~~~~ 482 (497)
+++ ...+.+.++++.
T Consensus 373 ----~~~-~~~~~~~i~~~~ 387 (391)
T 3tsa_A 373 ----MPH-PAALVRTLENTA 387 (391)
T ss_dssp ----SCC-HHHHHHHHHHC-
T ss_pred ----CCC-HHHHHHHHHHHH
Confidence 333 355555555543
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=8.5e-31 Score=264.20 Aligned_cols=367 Identities=16% Similarity=0.166 Sum_probs=237.7
Q ss_pred CCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCcc---------
Q 044823 4 ETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQ--------- 74 (497)
Q Consensus 4 ~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~--------- 74 (497)
+..+|||+|++.++.||++|++.||++|+++||+|++++++.. .+.+.. .++.++.++....
T Consensus 17 ~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~----~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~ 87 (412)
T 3otg_A 17 EGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGF----AGTLRK-----LGFEPVATGMPVFDGFLAALRI 87 (412)
T ss_dssp -CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGG----HHHHHH-----TTCEEEECCCCHHHHHHHHHHH
T ss_pred ccceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHH----HHHHHh-----cCCceeecCcccccchhhhhhh
Confidence 3567999999999999999999999999999999999998743 233222 2688887752000
Q ss_pred ---ccCCCCCCCCCCCCCchhHHHHHHHH-HHhchHHHHHHHhhcCCCCeEEEECCCCcchHHHHHHcCCCeEEEechhH
Q 044823 75 ---EAGLPEGCENFDMLPSIDLAYNFLTS-LQKLQLPFENLFREQTPQPCCIISDMCIPWTVDTAAKFNVPRIIFHGFSC 150 (497)
Q Consensus 75 ---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~i~~~~~~~ 150 (497)
....+.. ....... .....+... ...+...+.+++++ .+||+||+|....++..+|+.+|||++.+.....
T Consensus 88 ~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~--~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~ 162 (412)
T 3otg_A 88 RFDTDSPEGL-TPEQLSE--LPQIVFGRVIPQRVFDELQPVIER--LRPDLVVQEISNYGAGLAALKAGIPTICHGVGRD 162 (412)
T ss_dssp HHSCSCCTTC-CHHHHTT--SHHHHHHTHHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCC
T ss_pred hhcccCCccC-ChhHhhH--HHHHHHhccchHHHHHHHHHHHHh--cCCCEEEECchhhHHHHHHHHcCCCEEEeccccc
Confidence 0000000 0000000 111111111 22345677778888 8999999998777888999999999998543321
Q ss_pred HHHHHHHHhhhhcccCCCCCCCccccCCCCCCCcccccccCCCCCCCchHHHHHHHHHHh----------cccccEEEec
Q 044823 151 FCLLCLDILRVSKVHENVSSDSEYFKVPGFPHHIEFTKVQLPISPPTDELKEFNEKILAA----------DKKTYGVIIN 220 (497)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~ 220 (497)
..... ...+...+.+.... ...++.++..
T Consensus 163 ~~~~~-----------------------------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~ 201 (412)
T 3otg_A 163 TPDDL-----------------------------------------TRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDI 201 (412)
T ss_dssp CCSHH-----------------------------------------HHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEEC
T ss_pred Cchhh-----------------------------------------hHHHHHHHHHHHHHcCCCCCcccccCCCCeEEee
Confidence 00000 00011111111111 1123334444
Q ss_pred chhhhhHHHHHHHHhhcCCceEEeCcCcCCCccchhhhhcCCCCCCChhhhhhh-hccCCCCeEEEEeeCCcccCCHhhH
Q 044823 221 TFEELESASVKEYKNAKQGKVWCIGPVSLCNKESLDKVERGNKAAIDIPECLTW-LDSQQPSSVVYVCLGSICNLTSSQL 299 (497)
Q Consensus 221 s~~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~vv~vs~GS~~~~~~~~~ 299 (497)
+-..++.. ...+...-..+.+.... ...+...| ....+++++||+++||......+.+
T Consensus 202 ~~~~~~~~-----~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~ 260 (412)
T 3otg_A 202 FPPSLQEP-----EFRARPRRHELRPVPFA----------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVL 260 (412)
T ss_dssp SCGGGSCH-----HHHTCTTEEECCCCCCC----------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHH
T ss_pred CCHHhcCC-----cccCCCCcceeeccCCC----------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHH
Confidence 43333321 11111111111111000 01223345 2223445699999999976667888
Q ss_pred HHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCCccccccccCchhHHHHHHh
Q 044823 300 IELGLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPAVGGFLTHCGWNSSLEGISA 379 (497)
Q Consensus 300 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal~~ 379 (497)
..+++++++.+.+++|..+....... +.. .++|+.+.+|+|+..+|+++++ ||+|||.||++||+++
T Consensus 261 ~~~~~~l~~~~~~~~~~~g~~~~~~~-----l~~------~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~ 327 (412)
T 3otg_A 261 RAAIDGLAGLDADVLVASGPSLDVSG-----LGE------VPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGA 327 (412)
T ss_dssp HHHHHHHHTSSSEEEEECCSSCCCTT-----CCC------CCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEECCCCChhh-----hcc------CCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHh
Confidence 89999999889999999887642211 110 2569999999999999999998 9999999999999999
Q ss_pred CCcEeccCCcccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHH
Q 044823 380 GVQMLTWPLFTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFGEL 459 (497)
Q Consensus 380 GvP~l~~P~~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~ 459 (497)
|+|+|++|...||..|+..+ ++.|+|..+... .+++++|.++|.++|+|+ .+++++.+.+..
T Consensus 328 G~P~v~~p~~~~q~~~~~~v-~~~g~g~~~~~~-------------~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~ 389 (412)
T 3otg_A 328 GVPQLSFPWAGDSFANAQAV-AQAGAGDHLLPD-------------NISPDSVSGAAKRLLAEE----SYRAGARAVAAE 389 (412)
T ss_dssp TCCEEECCCSTTHHHHHHHH-HHHTSEEECCGG-------------GCCHHHHHHHHHHHHHCH----HHHHHHHHHHHH
T ss_pred CCCEEecCCchhHHHHHHHH-HHcCCEEecCcc-------------cCCHHHHHHHHHHHHhCH----HHHHHHHHHHHH
Confidence 99999999999999999999 499999999876 689999999999999998 777777777766
Q ss_pred HHHHHhhCCChHHHHHHHHHHHh
Q 044823 460 AKRALEEGGSSYNNIKFFHPRYH 482 (497)
Q Consensus 460 ~~~~~~~~g~~~~~~~~~~~~~~ 482 (497)
+.. ..+ ...+.+.++++.
T Consensus 390 ~~~----~~~-~~~~~~~~~~l~ 407 (412)
T 3otg_A 390 IAA----MPG-PDEVVRLLPGFA 407 (412)
T ss_dssp HHH----SCC-HHHHHTTHHHHH
T ss_pred Hhc----CCC-HHHHHHHHHHHh
Confidence 553 333 344555555543
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.96 E-value=5.9e-28 Score=238.80 Aligned_cols=341 Identities=14% Similarity=0.094 Sum_probs=208.6
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCCCCCCC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGCENFDM 87 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~ 87 (497)
.||+|...++-||++|.++||++|.++||+|+|++++...+ .+.+ ...++.++.++.. +++.. ..
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e--~~~v-----~~~g~~~~~i~~~----~~~~~----~~ 67 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIE--NDLV-----PKAGLPLHLIQVS----GLRGK----GL 67 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTH--HHHT-----GGGTCCEEECC-----------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHh--hchh-----hhcCCcEEEEECC----CcCCC----CH
Confidence 48999999888999999999999999999999998774322 1111 1125677766531 22111 00
Q ss_pred CCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCCc--chHHHHHHcCCCeEEEechhHHHHHHHHHhhhhccc
Q 044823 88 LPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCIP--WTVDTAAKFNVPRIIFHGFSCFCLLCLDILRVSKVH 165 (497)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~--~a~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~ 165 (497)
.........+... .....+++++ .+||+||++.... .+..+|+.+|||++..
T Consensus 68 ~~~~~~~~~~~~~----~~~~~~~l~~--~~PDvVi~~g~~~s~p~~laA~~~~iP~vih-------------------- 121 (365)
T 3s2u_A 68 KSLVKAPLELLKS----LFQALRVIRQ--LRPVCVLGLGGYVTGPGGLAARLNGVPLVIH-------------------- 121 (365)
T ss_dssp -----CHHHHHHH----HHHHHHHHHH--HCCSEEEECSSSTHHHHHHHHHHTTCCEEEE--------------------
T ss_pred HHHHHHHHHHHHH----HHHHHHHHHh--cCCCEEEEcCCcchHHHHHHHHHcCCCEEEE--------------------
Confidence 0001111122222 2234566777 7999999997543 4567899999999862
Q ss_pred CCCCCCCccccCCCCCCCcccccccCCCCCCCchHHHHHHHHHHhcccccEEEecchhhhhHHHHHHHHhhcCCceEEeC
Q 044823 166 ENVSSDSEYFKVPGFPHHIEFTKVQLPISPPTDELKEFNEKILAADKKTYGVIINTFEELESASVKEYKNAKQGKVWCIG 245 (497)
Q Consensus 166 ~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~vG 245 (497)
+....||+.. +++ .+.+..+. .++.+.. ....+..++|
T Consensus 122 -------e~n~~~G~~n-------------------r~l------~~~a~~v~-~~~~~~~---------~~~~k~~~~g 159 (365)
T 3s2u_A 122 -------EQNAVAGTAN-------------------RSL------APIARRVC-EAFPDTF---------PASDKRLTTG 159 (365)
T ss_dssp -------ECSSSCCHHH-------------------HHH------GGGCSEEE-ESSTTSS---------CC---CEECC
T ss_pred -------ecchhhhhHH-------------------Hhh------ccccceee-ecccccc---------cCcCcEEEEC
Confidence 1122222211 111 11222232 2222211 1124667788
Q ss_pred cCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCcccCCHhhHHHHHHHHHhC----CCCeEEEEeCCC
Q 044823 246 PVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEAS----KKPFIWVSRVGN 321 (497)
Q Consensus 246 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~ 321 (497)
+........ +......++ +.+++|+|..||.... ...+.+.++++.. +..++|.++...
T Consensus 160 ~pvr~~~~~-------------~~~~~~~~~--~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~~ 222 (365)
T 3s2u_A 160 NPVRGELFL-------------DAHARAPLT--GRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQH 222 (365)
T ss_dssp CCCCGGGCC-------------CTTSSCCCT--TSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTTT
T ss_pred CCCchhhcc-------------chhhhcccC--CCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCccc
Confidence 544322111 011111122 2345899998987643 2334456666644 445777776543
Q ss_pred chhhhhhhhchhhHHHHhcCCCeeeecccch-HhhhccCCccccccccCchhHHHHHHhCCcEeccCCc----ccchhhH
Q 044823 322 KLEELEKWLVEENFEERIKGRGLLIRGWAPQ-VMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLF----TDQFCNE 396 (497)
Q Consensus 322 ~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq-~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~----~DQ~~na 396 (497)
.. . +.+.+ +..+.++.+.+|+++ ..+|+.+++ +|||+|.+|++|++++|+|+|++|.. .+|..||
T Consensus 223 ~~-~-----~~~~~--~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA 292 (365)
T 3s2u_A 223 AE-I-----TAERY--RTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNA 292 (365)
T ss_dssp HH-H-----HHHHH--HHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHH
T ss_pred cc-c-----cccee--cccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHH
Confidence 21 1 11111 112568888999998 569999999 99999999999999999999999974 4799999
Q ss_pred HHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHH
Q 044823 397 KLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFGELAKRALEEGGSSYNNIKF 476 (497)
Q Consensus 397 ~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~ 476 (497)
+.++ +.|+|+.+... .+++++|.++|.++|+|++..+.|++++++++. . .+...+.+
T Consensus 293 ~~l~-~~G~a~~l~~~-------------~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~~~--------~-~aa~~ia~ 349 (365)
T 3s2u_A 293 EFLV-RSGAGRLLPQK-------------STGAAELAAQLSEVLMHPETLRSMADQARSLAK--------P-EATRTVVD 349 (365)
T ss_dssp HHHH-TTTSEEECCTT-------------TCCHHHHHHHHHHHHHCTHHHHHHHHHHHHTCC--------T-THHHHHHH
T ss_pred HHHH-HCCCEEEeecC-------------CCCHHHHHHHHHHHHCCHHHHHHHHHHHHhcCC--------c-cHHHHHHH
Confidence 9995 99999999876 689999999999999999666666666655432 1 23455556
Q ss_pred HHHHH
Q 044823 477 FHPRY 481 (497)
Q Consensus 477 ~~~~~ 481 (497)
.|+++
T Consensus 350 ~i~~l 354 (365)
T 3s2u_A 350 ACLEV 354 (365)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66555
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=5.3e-27 Score=206.29 Aligned_cols=162 Identities=23% Similarity=0.346 Sum_probs=138.1
Q ss_pred ChhhhhhhhccCCCCeEEEEeeCCccc-CCHhhHHHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCee
Q 044823 267 DIPECLTWLDSQQPSSVVYVCLGSICN-LTSSQLIELGLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLL 345 (497)
Q Consensus 267 ~~~~~~~~l~~~~~~~vv~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~ 345 (497)
++.++.+|++..+++++|||++||... ...+.+..++++++..+.+++|+.+..... . + ++|+.
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~----~--~---------~~~v~ 71 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPD----T--L---------GLNTR 71 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCT----T--C---------CTTEE
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCcc----c--C---------CCcEE
Confidence 478999999876666799999999874 457788899999998899999998765311 0 2 46999
Q ss_pred eecccchHhhhccCCccccccccCchhHHHHHHhCCcEeccCCcccchhhHHHHHHHHcceeEecccccccccccccccc
Q 044823 346 IRGWAPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGV 425 (497)
Q Consensus 346 v~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~ 425 (497)
+.+|+||..+|.|+++.+||||||+||++||+++|+|+|++|...||..||.++ ++.|+|+.++..
T Consensus 72 ~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l-~~~g~g~~~~~~------------- 137 (170)
T 2o6l_A 72 LYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHM-KARGAAVRVDFN------------- 137 (170)
T ss_dssp EESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HTTTSEEECCTT-------------
T ss_pred EecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHH-HHcCCeEEeccc-------------
Confidence 999999999996666666999999999999999999999999999999999999 599999999866
Q ss_pred ccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHH
Q 044823 426 LVKKEDVETAINILMDDGEERDGRRRRAKEFGELAK 461 (497)
Q Consensus 426 ~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~ 461 (497)
.++.++|.++|.++++|+ .|+++++++++.++
T Consensus 138 ~~~~~~l~~~i~~ll~~~----~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 138 TMSSTDLLNALKRVINDP----SYKENVMKLSRIQH 169 (170)
T ss_dssp TCCHHHHHHHHHHHHHCH----HHHHHHHHHC----
T ss_pred cCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHhh
Confidence 689999999999999987 89999999998876
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.83 E-value=9.7e-19 Score=172.77 Aligned_cols=322 Identities=14% Similarity=0.070 Sum_probs=196.8
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCCCCCCC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGCENFDM 87 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~ 87 (497)
|||++++.+..||..+++.||++|+++||+|++++...... .... ...++.++.++.+ .+...
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~--~~~~-----~~~g~~~~~~~~~----~~~~~------ 69 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRME--ADLV-----PKHGIEIDFIRIS----GLRGK------ 69 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTH--HHHG-----GGGTCEEEECCCC----CCTTC------
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcch--hhhc-----cccCCceEEecCC----ccCcC------
Confidence 89999998878999999999999999999999999864321 1111 1126777766532 11110
Q ss_pred CCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCC--cchHHHHHHcCCCeEEEechhHHHHHHHHHhhhhccc
Q 044823 88 LPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCI--PWTVDTAAKFNVPRIIFHGFSCFCLLCLDILRVSKVH 165 (497)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~--~~a~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~ 165 (497)
.....+..... .......+.+++++ .+||+|+++... ..+..++..+|+|++......
T Consensus 70 -~~~~~~~~~~~-~~~~~~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~---------------- 129 (364)
T 1f0k_A 70 -GIKALIAAPLR-IFNAWRQARAIMKA--YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG---------------- 129 (364)
T ss_dssp -CHHHHHTCHHH-HHHHHHHHHHHHHH--HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS----------------
T ss_pred -ccHHHHHHHHH-HHHHHHHHHHHHHh--cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC----------------
Confidence 00011101111 11223456667777 799999998643 345678889999998632110
Q ss_pred CCCCCCCccccCCCCCCCcccccccCCCCCCCchHHHHHHHHHHhcccccEEEecchhhhhHHHHHHHHhhcCCceEEeC
Q 044823 166 ENVSSDSEYFKVPGFPHHIEFTKVQLPISPPTDELKEFNEKILAADKKTYGVIINTFEELESASVKEYKNAKQGKVWCIG 245 (497)
Q Consensus 166 ~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~vG 245 (497)
.++ ...+. ..+.++.+++.+-.. ++ ++..+|
T Consensus 130 -----------~~~-----------------------~~~~~--~~~~~d~v~~~~~~~------------~~-~~~~i~ 160 (364)
T 1f0k_A 130 -----------IAG-----------------------LTNKW--LAKIATKVMQAFPGA------------FP-NAEVVG 160 (364)
T ss_dssp -----------SCC-----------------------HHHHH--HTTTCSEEEESSTTS------------SS-SCEECC
T ss_pred -----------CCc-----------------------HHHHH--HHHhCCEEEecChhh------------cC-CceEeC
Confidence 000 00011 112344555433211 22 456676
Q ss_pred cCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCcccCCHhhHHHHHHHHHhC--CCCeEEEEeCCCch
Q 044823 246 PVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEAS--KKPFIWVSRVGNKL 323 (497)
Q Consensus 246 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~ 323 (497)
..+...... ++.....+...+++++|++..|+... ......++++++.. +.++++..|.+..
T Consensus 161 n~v~~~~~~-------------~~~~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~~- 224 (364)
T 1f0k_A 161 NPVRTDVLA-------------LPLPQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGSQ- 224 (364)
T ss_dssp CCCCHHHHT-------------SCCHHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTCH-
T ss_pred Cccchhhcc-------------cchhhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCchH-
Confidence 432211000 00011122222234578787788753 33344555666543 4566677766542
Q ss_pred hhhhhhhchhhHHHHhcCCCeeeecccch-HhhhccCCccccccccCchhHHHHHHhCCcEeccCCc---ccchhhHHHH
Q 044823 324 EELEKWLVEENFEERIKGRGLLIRGWAPQ-VMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLF---TDQFCNEKLI 399 (497)
Q Consensus 324 ~~~~~~~lp~~~~~~~~~~nv~v~~~~pq-~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~---~DQ~~na~~~ 399 (497)
.. +.+ ...+...+|+.+.+|+++ ..+++.+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+..+
T Consensus 225 ~~-----l~~-~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~ 296 (364)
T 1f0k_A 225 QS-----VEQ-AYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPL 296 (364)
T ss_dssp HH-----HHH-HHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHH
T ss_pred HH-----HHH-HHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHH
Confidence 11 211 112222358999999954 779999999 99999988999999999999999987 7899999999
Q ss_pred HHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHH
Q 044823 400 VEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKE 455 (497)
Q Consensus 400 ~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~ 455 (497)
. +.|.|..++.. ..+.+++.++|.++ |++..+.+.+++++
T Consensus 297 ~-~~g~g~~~~~~-------------d~~~~~la~~i~~l--~~~~~~~~~~~~~~ 336 (364)
T 1f0k_A 297 E-KAGAAKIIEQP-------------QLSVDAVANTLAGW--SRETLLTMAERARA 336 (364)
T ss_dssp H-HTTSEEECCGG-------------GCCHHHHHHHHHTC--CHHHHHHHHHHHHH
T ss_pred H-hCCcEEEeccc-------------cCCHHHHHHHHHhc--CHHHHHHHHHHHHH
Confidence 5 99999988766 46799999999998 66444444444433
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.56 E-value=4.9e-15 Score=133.40 Aligned_cols=120 Identities=12% Similarity=0.026 Sum_probs=88.1
Q ss_pred CCCeEEEEeeCCcccCCHhhHHHH-----HHHHHhCC-CCeEEEEeCCCchhhhhhhhchhhHHHHh-------------
Q 044823 279 QPSSVVYVCLGSICNLTSSQLIEL-----GLGLEASK-KPFIWVSRVGNKLEELEKWLVEENFEERI------------- 339 (497)
Q Consensus 279 ~~~~vv~vs~GS~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~~~~lp~~~~~~~------------- 339 (497)
+++++|||+.||... -.+.+..+ +++|...+ .++++.+|..... ....+....
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~-------~~~~~~~~~~~~~~~~l~p~~~ 97 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSS-------EFEHLVQERGGQRESQKIPIDQ 97 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCC-------CCCSHHHHHTCEECSCCCSSCT
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchh-------hHHHHHHhhhcccccccccccc
Confidence 345689999999732 24444433 48888777 7999999876431 001111111
Q ss_pred --------------cCCCeeeecccchH-hhhc-cCCccccccccCchhHHHHHHhCCcEeccCCc----ccchhhHHHH
Q 044823 340 --------------KGRGLLIRGWAPQV-MILS-HPAVGGFLTHCGWNSSLEGISAGVQMLTWPLF----TDQFCNEKLI 399 (497)
Q Consensus 340 --------------~~~nv~v~~~~pq~-~lL~-~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~----~DQ~~na~~~ 399 (497)
..-++.+.+|+++. .+|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l 175 (224)
T 2jzc_A 98 FGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKF 175 (224)
T ss_dssp TCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHH
T ss_pred ccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHH
Confidence 01245677888875 7999 9999 99999999999999999999999984 3699999999
Q ss_pred HHHHcceeEe
Q 044823 400 VEVLRIGVSV 409 (497)
Q Consensus 400 ~e~~G~G~~l 409 (497)
+ +.|+|+.+
T Consensus 176 ~-~~G~~~~~ 184 (224)
T 2jzc_A 176 V-ELGYVWSC 184 (224)
T ss_dssp H-HHSCCCEE
T ss_pred H-HCCCEEEc
Confidence 5 99998765
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.56 E-value=7.2e-14 Score=131.14 Aligned_cols=117 Identities=7% Similarity=0.032 Sum_probs=90.1
Q ss_pred CeEEEEeeCCcccCCHhhHHHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHh-cCCCeeeecccchH-hhhcc
Q 044823 281 SSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEERI-KGRGLLIRGWAPQV-MILSH 358 (497)
Q Consensus 281 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~pq~-~lL~~ 358 (497)
.+.|+|++|..... .....+++++.... ++.++.+.+.. ..+.+.... ..+|+.+.+|+++. .+++.
T Consensus 157 ~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~~~--------~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~ 225 (282)
T 3hbm_A 157 KYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSSNP--------NLKKLQKFAKLHNNIRLFIDHENIAKLMNE 225 (282)
T ss_dssp CEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTTCT--------THHHHHHHHHTCSSEEEEESCSCHHHHHHT
T ss_pred CCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCCch--------HHHHHHHHHhhCCCEEEEeCHHHHHHHHHH
Confidence 45799999976532 35556777776644 57777766543 112222222 24589999999885 59999
Q ss_pred CCccccccccCchhHHHHHHhCCcEeccCCcccchhhHHHHHHHHcceeEeccc
Q 044823 359 PAVGGFLTHCGWNSSLEGISAGVQMLTWPLFTDQFCNEKLIVEVLRIGVSVGVE 412 (497)
Q Consensus 359 ~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~G~~l~~~ 412 (497)
+++ +||+|| +|++|+++.|+|+|++|...+|..||+.++ +.|+|+.+..-
T Consensus 226 aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~-~~G~~~~~~~~ 275 (282)
T 3hbm_A 226 SNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLA-KKGYEVEYKYL 275 (282)
T ss_dssp EEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHH-HTTCEEECGGG
T ss_pred CCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHH-HCCCEEEcchh
Confidence 999 999999 899999999999999999999999999995 99999998754
No 25
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.42 E-value=1.1e-11 Score=122.67 Aligned_cols=163 Identities=16% Similarity=0.128 Sum_probs=97.8
Q ss_pred CeEEEEeeCCcccCCHhhHHHHHHHHHhC-----CCCeEEEEeCCCchhhhhhhhchhhHHHHh-cCCCeeeecccch--
Q 044823 281 SSVVYVCLGSICNLTSSQLIELGLGLEAS-----KKPFIWVSRVGNKLEELEKWLVEENFEERI-KGRGLLIRGWAPQ-- 352 (497)
Q Consensus 281 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~pq-- 352 (497)
+++|+++.|...... .+..++++++.. +.++++..+.+.. +-+.+.+.. ..+++.+.+++++
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~--------~~~~l~~~~~~~~~v~~~g~~g~~~ 267 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNPV--------VREAVFPVLKGVRNFVLLDPLEYGS 267 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCHH--------HHHHHHHHHTTCTTEEEECCCCHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCHH--------HHHHHHHHhccCCCEEEECCCCHHH
Confidence 346777777553221 355566666532 4455554443321 111222221 1358888855544
Q ss_pred -HhhhccCCccccccccCchhHHHHHHhCCcEeccCCcccchhhHHHHHHHHcceeEeccccccccccccccccccCHHH
Q 044823 353 -VMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKED 431 (497)
Q Consensus 353 -~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~ 431 (497)
..+++.+++ ||+.+| |.+.||+++|+|+|+.+..+++.. +. +.|.|+.+. .++++
T Consensus 268 ~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~-~~g~g~lv~----------------~d~~~ 323 (376)
T 1v4v_A 268 MAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GL-KAGILKLAG----------------TDPEG 323 (376)
T ss_dssp HHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HH-HHTSEEECC----------------SCHHH
T ss_pred HHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hh-cCCceEECC----------------CCHHH
Confidence 579999998 999884 445699999999999987777765 33 567787663 27899
Q ss_pred HHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhhccC
Q 044823 432 VETAINILMDDGEERDGRRRRAKEFGELAKRALEEGGSSYNNIKFFHPRYHATAD 486 (497)
Q Consensus 432 l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 486 (497)
|.+++.++++|++..+.+.+++ +. ...+ .+...+.+.+.++...+.
T Consensus 324 la~~i~~ll~d~~~~~~~~~~~-------~~-~~~~-~~~~~i~~~i~~~~~~~~ 369 (376)
T 1v4v_A 324 VYRVVKGLLENPEELSRMRKAK-------NP-YGDG-KAGLMVARGVAWRLGLGP 369 (376)
T ss_dssp HHHHHHHHHTCHHHHHHHHHSC-------CS-SCCS-CHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHhChHhhhhhcccC-------CC-CCCC-hHHHHHHHHHHHHhcccc
Confidence 9999999999873333333221 11 1223 344555566666654443
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.42 E-value=2.3e-10 Score=113.52 Aligned_cols=333 Identities=12% Similarity=0.045 Sum_probs=184.2
Q ss_pred CCCcEEEEecC--C--CcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCC
Q 044823 5 TSNFHFILLPF--L--AQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPE 80 (497)
Q Consensus 5 ~~~~~vl~~~~--p--~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~ 80 (497)
+++|||++++. + .-|.-.-+..|++.| +||+|++++............ ...++.++.++.. .
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-------~ 67 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD-----KTLDYEVIRWPRS-------V 67 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH-----TTCSSEEEEESSS-------S
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc-----cccceEEEEcccc-------c
Confidence 46789999985 3 467888899999999 799999998875443211111 2346777776521 0
Q ss_pred CCCCCCCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCC--cchHHHHHHcCCCeEEEechhHHHHHHHHH
Q 044823 81 GCENFDMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCI--PWTVDTAAKFNVPRIIFHGFSCFCLLCLDI 158 (497)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~--~~a~~~A~~lgIP~i~~~~~~~~~~~~~~~ 158 (497)
. ... . .....+.+++++ .+||+|++.... .....++..+|+|.+++.........
T Consensus 68 ~------~~~---~--------~~~~~l~~~~~~--~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~---- 124 (394)
T 3okp_A 68 M------LPT---P--------TTAHAMAEIIRE--REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW---- 124 (394)
T ss_dssp C------CSC---H--------HHHHHHHHHHHH--TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH----
T ss_pred c------ccc---h--------hhHHHHHHHHHh--cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh----
Confidence 0 001 0 123456677787 799999976543 34556788999995553322211100
Q ss_pred hhhhcccCCCCCCCccccCCCCCCCcccccccCCCCCCCchHHHHHHHHHHhcccccEEEecchhhhhHHHHHHHHhh--
Q 044823 159 LRVSKVHENVSSDSEYFKVPGFPHHIEFTKVQLPISPPTDELKEFNEKILAADKKTYGVIINTFEELESASVKEYKNA-- 236 (497)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~-- 236 (497)
.. ........ ....+.++.+++.|-...+ .+...
T Consensus 125 ----------------------~~--------------~~~~~~~~---~~~~~~~d~ii~~s~~~~~-----~~~~~~~ 160 (394)
T 3okp_A 125 ----------------------SM--------------LPGSRQSL---RKIGTEVDVLTYISQYTLR-----RFKSAFG 160 (394)
T ss_dssp ----------------------TT--------------SHHHHHHH---HHHHHHCSEEEESCHHHHH-----HHHHHHC
T ss_pred ----------------------hh--------------cchhhHHH---HHHHHhCCEEEEcCHHHHH-----HHHHhcC
Confidence 00 00011112 2233567778877754332 12221
Q ss_pred cCCceEEeCcCcCCCccch-hhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCccc-CCHhhHHHHHHHHHh--CCCC
Q 044823 237 KQGKVWCIGPVSLCNKESL-DKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSICN-LTSSQLIELGLGLEA--SKKP 312 (497)
Q Consensus 237 ~~~~~~~vGp~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~-~~~~~~~~~~~al~~--~~~~ 312 (497)
...++..+..-+....-.. .. .....+.+-+.-.+ +..+++..|+... ...+.+...++.+.+ .+.+
T Consensus 161 ~~~~~~vi~ngv~~~~~~~~~~--------~~~~~~~~~~~~~~-~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~ 231 (394)
T 3okp_A 161 SHPTFEHLPSGVDVKRFTPATP--------EDKSATRKKLGFTD-TTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQ 231 (394)
T ss_dssp SSSEEEECCCCBCTTTSCCCCH--------HHHHHHHHHTTCCT-TCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCE
T ss_pred CCCCeEEecCCcCHHHcCCCCc--------hhhHHHHHhcCCCc-CceEEEEEeccccccCHHHHHHHHHHHHhhCCCeE
Confidence 1346666664332211100 00 00122333332222 2246677787643 223333333333332 2445
Q ss_pred eEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHh---hhccCCcccccc-----------ccCchhHHHHHH
Q 044823 313 FIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVM---ILSHPAVGGFLT-----------HCGWNSSLEGIS 378 (497)
Q Consensus 313 ~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~---lL~~~~~~~~It-----------HgG~gs~~eal~ 378 (497)
+++. |.+.....+.. +. ....+++.+.+|+|+.+ ++..+++ +|. -|.-+++.||++
T Consensus 232 l~i~-G~g~~~~~l~~------~~-~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a 301 (394)
T 3okp_A 232 LLIV-GSGRYESTLRR------LA-TDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQA 301 (394)
T ss_dssp EEEE-CCCTTHHHHHH------HT-GGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHH
T ss_pred EEEE-cCchHHHHHHH------HH-hcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHH
Confidence 5544 33322211111 00 11247899999997544 7888888 665 444568999999
Q ss_pred hCCcEeccCCcccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHH
Q 044823 379 AGVQMLTWPLFTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFGE 458 (497)
Q Consensus 379 ~GvP~l~~P~~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~ 458 (497)
+|+|+|+.+.. .....+ +. |.|...+.. +.+++.++|.++++|++..+.+.+++++...
T Consensus 302 ~G~PvI~~~~~----~~~e~i-~~-~~g~~~~~~---------------d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~ 360 (394)
T 3okp_A 302 CGVPVIAGTSG----GAPETV-TP-ATGLVVEGS---------------DVDKLSELLIELLDDPIRRAAMGAAGRAHVE 360 (394)
T ss_dssp TTCCEEECSST----TGGGGC-CT-TTEEECCTT---------------CHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEeCCC----ChHHHH-hc-CCceEeCCC---------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 99999996653 334444 23 377777654 7899999999999988666666666665543
No 27
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.42 E-value=7.8e-11 Score=118.91 Aligned_cols=381 Identities=13% Similarity=0.052 Sum_probs=194.8
Q ss_pred CCCcEEEEecC---C--------CcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCc
Q 044823 5 TSNFHFILLPF---L--------AQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPW 73 (497)
Q Consensus 5 ~~~~~vl~~~~---p--------~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~ 73 (497)
.++|||++++. | .-|+-.....||+.|.++||+|++++........ . ......++.++.++...
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~-~----~~~~~~~v~v~~~~~~~ 92 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQG-E----IVRVAENLRVINIAAGP 92 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGC-S----EEEEETTEEEEEECCSC
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCc-c----cccccCCeEEEEecCCC
Confidence 67899999995 2 3578889999999999999999999876432110 0 00012367777765321
Q ss_pred cccCCCCCCCCCCCCCchhHHHHHHHHHHhchHHHHHH-HhhcCCCCeEEEECCCC--cchHHHHHHcCCCeEEEechhH
Q 044823 74 QEAGLPEGCENFDMLPSIDLAYNFLTSLQKLQLPFENL-FREQTPQPCCIISDMCI--PWTVDTAAKFNVPRIIFHGFSC 150 (497)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~D~vI~D~~~--~~a~~~A~~lgIP~i~~~~~~~ 150 (497)
.. .. .. ......+.. +...+.+. ++.. .+||+|++.... ..+..+++.+|+|+|.......
T Consensus 93 ~~-----~~-~~--~~~~~~~~~-------~~~~~~~~~~~~~-~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~ 156 (438)
T 3c48_A 93 YE-----GL-SK--EELPTQLAA-------FTGGMLSFTRREK-VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLA 156 (438)
T ss_dssp SS-----SC-CG--GGGGGGHHH-------HHHHHHHHHHHHT-CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred cc-----cc-ch--hHHHHHHHH-------HHHHHHHHHHhcc-CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCc
Confidence 00 00 00 000011111 11222222 4441 359999987532 2344577888999887543322
Q ss_pred HHHHHHHHhhhhcccCCCCCCCccccCCCCCCCcccccccCCCCCCCchHHHHHHHHHHhcccccEEEecchhhhhHHHH
Q 044823 151 FCLLCLDILRVSKVHENVSSDSEYFKVPGFPHHIEFTKVQLPISPPTDELKEFNEKILAADKKTYGVIINTFEELESASV 230 (497)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~ 230 (497)
.... . .+.. .... .......+ .....+.++.+++.+-...+ .+
T Consensus 157 ~~~~-------------------~----~~~~------~~~~----~~~~~~~~--~~~~~~~~d~ii~~s~~~~~--~~ 199 (438)
T 3c48_A 157 AVKN-------------------S----YRDD------SDTP----ESEARRIC--EQQLVDNADVLAVNTQEEMQ--DL 199 (438)
T ss_dssp HHHS-------------------C----C----------CCH----HHHHHHHH--HHHHHHHCSEEEESSHHHHH--HH
T ss_pred cccc-------------------c----cccc------cCCc----chHHHHHH--HHHHHhcCCEEEEcCHHHHH--HH
Confidence 1100 0 0000 0000 00001111 12234567788887755332 11
Q ss_pred HHHHhhc-CCceEEeCcCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCccc-CCHhhHHHHHHHHHh
Q 044823 231 KEYKNAK-QGKVWCIGPVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSICN-LTSSQLIELGLGLEA 308 (497)
Q Consensus 231 ~~~~~~~-~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~-~~~~~~~~~~~al~~ 308 (497)
... ... +.++..|..-+....-... .......+.+-+.-.++ ..+++..|+... ...+.+...+..+.+
T Consensus 200 ~~~-~g~~~~k~~vi~ngvd~~~~~~~-------~~~~~~~~r~~~~~~~~-~~~i~~~G~~~~~Kg~~~li~a~~~l~~ 270 (438)
T 3c48_A 200 MHH-YDADPDRISVVSPGADVELYSPG-------NDRATERSRRELGIPLH-TKVVAFVGRLQPFKGPQVLIKAVAALFD 270 (438)
T ss_dssp HHH-HCCCGGGEEECCCCCCTTTSCCC-----------CHHHHHHTTCCSS-SEEEEEESCBSGGGCHHHHHHHHHHHHH
T ss_pred HHH-hCCChhheEEecCCccccccCCc-------ccchhhhhHHhcCCCCC-CcEEEEEeeecccCCHHHHHHHHHHHHh
Confidence 110 011 2456666644322110000 00000112332222222 246677787654 222333333333332
Q ss_pred C----CCCeEEEEeC----CCchhhhhhhhchhhHHHHh-cCCCeeeecccch---HhhhccCCcccccccc---C-chh
Q 044823 309 S----KKPFIWVSRV----GNKLEELEKWLVEENFEERI-KGRGLLIRGWAPQ---VMILSHPAVGGFLTHC---G-WNS 372 (497)
Q Consensus 309 ~----~~~~i~~~~~----~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~pq---~~lL~~~~~~~~ItHg---G-~gs 372 (497)
. +.++++ +|. +..... +- .+..+. ..+++.+.+|+|+ ..++..+++ +|.-. | -++
T Consensus 271 ~~p~~~~~l~i-~G~~~~~g~~~~~-----l~-~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~ 341 (438)
T 3c48_A 271 RDPDRNLRVII-CGGPSGPNATPDT-----YR-HMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLV 341 (438)
T ss_dssp HCTTCSEEEEE-ECCBC------CH-----HH-HHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHH
T ss_pred hCCCcceEEEE-EeCCCCCCcHHHH-----HH-HHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchH
Confidence 2 233333 333 111111 11 111222 2568999999976 458888888 66432 3 458
Q ss_pred HHHHHHhCCcEeccCCcccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHH
Q 044823 373 SLEGISAGVQMLTWPLFTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRR 452 (497)
Q Consensus 373 ~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~ 452 (497)
+.||+++|+|+|+.+. ......+ +..+.|+.++.. +.+++.++|.++++|++..+.+.++
T Consensus 342 ~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~~~~---------------d~~~la~~i~~l~~~~~~~~~~~~~ 401 (438)
T 3c48_A 342 AMEAQASGTPVIAARV----GGLPIAV-AEGETGLLVDGH---------------SPHAWADALATLLDDDETRIRMGED 401 (438)
T ss_dssp HHHHHHTTCCEEEESC----TTHHHHS-CBTTTEEEESSC---------------CHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHcCCCEEecCC----CChhHHh-hCCCcEEECCCC---------------CHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 9999999999999653 4455566 466678877644 7899999999999988777788888
Q ss_pred HHHHHHHHHHHHhhCCChHHHHHHHHHHHhhccC
Q 044823 453 AKEFGELAKRALEEGGSSYNNIKFFHPRYHATAD 486 (497)
Q Consensus 453 a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 486 (497)
+++....+.-. ...+.+.++++++.....
T Consensus 402 ~~~~~~~~s~~-----~~~~~~~~~~~~~~~~~~ 430 (438)
T 3c48_A 402 AVEHARTFSWA-----ATAAQLSSLYNDAIANEN 430 (438)
T ss_dssp HHHHHHHHHHH-----HHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHhCCHH-----HHHHHHHHHHHHHhhhcc
Confidence 87776663321 233555666666665543
No 28
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.30 E-value=3.6e-10 Score=112.66 Aligned_cols=329 Identities=13% Similarity=0.082 Sum_probs=172.1
Q ss_pred CCCcEEEEecCC---C-cCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCC
Q 044823 5 TSNFHFILLPFL---A-QGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPE 80 (497)
Q Consensus 5 ~~~~~vl~~~~p---~-~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~ 80 (497)
.++|||++++.. . .|.-.-...|++.|.++||+|++++............ ... + .++.++.
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~----~~~-~-~~~~~~~--------- 82 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYV----VSG-G-KAVPIPY--------- 82 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTE----EEC-C-CCC-------------
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCccc----ccC-C-cEEeccc---------
Confidence 467999999853 2 4566889999999999999999998764322010000 000 0 1111110
Q ss_pred CCCCCCCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCCc--chHHHHHHcCCCeEEEechhHHHHHHHHH
Q 044823 81 GCENFDMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCIP--WTVDTAAKFNVPRIIFHGFSCFCLLCLDI 158 (497)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~--~a~~~A~~lgIP~i~~~~~~~~~~~~~~~ 158 (497)
.. . ...+. ........+.++++. .+||+|++..... .+..++...|+|++.......
T Consensus 83 ~~---------~-~~~~~-~~~~~~~~l~~~l~~--~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~-------- 141 (406)
T 2gek_A 83 NG---------S-VARLR-FGPATHRKVKKWIAE--GDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTST-------- 141 (406)
T ss_dssp -------------------CCHHHHHHHHHHHHH--HCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCC--------
T ss_pred cC---------C-ccccc-ccHHHHHHHHHHHHh--cCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcc--------
Confidence 00 0 00000 000122456667777 7999999776442 355677778999987532210
Q ss_pred hhhhcccCCCCCCCccccCCCCCCCcccccccCCCCCCCchHHHHHHHHHHhcccccEEEecchhhhhHHHHHHHHhhcC
Q 044823 159 LRVSKVHENVSSDSEYFKVPGFPHHIEFTKVQLPISPPTDELKEFNEKILAADKKTYGVIINTFEELESASVKEYKNAKQ 238 (497)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~ 238 (497)
+.. . ....+...+....+.++.+++.+-...+ .+...++
T Consensus 142 ----------------------~~~--~------------~~~~~~~~~~~~~~~~d~ii~~s~~~~~-----~~~~~~~ 180 (406)
T 2gek_A 142 ----------------------TKS--L------------TLSVFQGILRPYHEKIIGRIAVSDLARR-----WQMEALG 180 (406)
T ss_dssp ----------------------CSH--H------------HHHHHHSTTHHHHTTCSEEEESSHHHHH-----HHHHHHS
T ss_pred ----------------------hhh--h------------hHHHHHHHHHHHHhhCCEEEECCHHHHH-----HHHHhcC
Confidence 000 0 0000000011234567777777744322 1222233
Q ss_pred -CceEEeCcCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCc-cc-CCHhhHHHHHHHHHhC--CCCe
Q 044823 239 -GKVWCIGPVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSI-CN-LTSSQLIELGLGLEAS--KKPF 313 (497)
Q Consensus 239 -~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~-~~-~~~~~~~~~~~al~~~--~~~~ 313 (497)
.++ .+..-+.... . . ... .... +.. + ..+++..|+. .. ...+.+...+..+.+. +.++
T Consensus 181 ~~~~-vi~~~v~~~~-~-~---~~~----~~~~----~~~--~-~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l 243 (406)
T 2gek_A 181 SDAV-EIPNGVDVAS-F-A---DAP----LLDG----YPR--E-GRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEI 243 (406)
T ss_dssp SCEE-ECCCCBCHHH-H-H---TCC----CCTT----CSC--S-SCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEE
T ss_pred CCcE-EecCCCChhh-c-C---CCc----hhhh----ccC--C-CeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEE
Confidence 344 4543321100 0 0 000 0000 000 1 1356667877 43 2233333333333332 3444
Q ss_pred EEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchH---hhhccCCcccccc----ccCch-hHHHHHHhCCcEec
Q 044823 314 IWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQV---MILSHPAVGGFLT----HCGWN-SSLEGISAGVQMLT 385 (497)
Q Consensus 314 i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~---~lL~~~~~~~~It----HgG~g-s~~eal~~GvP~l~ 385 (497)
++. |.+.. ..... +..+. .+++.+.+|+++. .++..+++ +|. +.|++ ++.||+++|+|+|+
T Consensus 244 ~i~-G~~~~-~~l~~------~~~~~-~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~ 312 (406)
T 2gek_A 244 LIV-GRGDE-DELRE------QAGDL-AGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVA 312 (406)
T ss_dssp EEE-SCSCH-HHHHH------HTGGG-GGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEE
T ss_pred EEE-cCCcH-HHHHH------HHHhc-cCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEE
Confidence 433 33321 11111 11111 5789999999874 68889998 552 44554 89999999999999
Q ss_pred cCCcccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHH
Q 044823 386 WPLFTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFGE 458 (497)
Q Consensus 386 ~P~~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~ 458 (497)
.+. ......+ +..+.|...+.. +.+++.++|.++++|++..+.+.+++++...
T Consensus 313 ~~~----~~~~e~i-~~~~~g~~~~~~---------------d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~ 365 (406)
T 2gek_A 313 SDL----DAFRRVL-ADGDAGRLVPVD---------------DADGMAAALIGILEDDQLRAGYVARASERVH 365 (406)
T ss_dssp CCC----HHHHHHH-TTTTSSEECCTT---------------CHHHHHHHHHHHHHCHHHHHHHHHHHHHHGG
T ss_pred ecC----CcHHHHh-cCCCceEEeCCC---------------CHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 755 5566666 466778877654 7899999999999987655556666655543
No 29
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.29 E-value=6.9e-11 Score=117.08 Aligned_cols=337 Identities=13% Similarity=0.054 Sum_probs=172.3
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCC-eEEEEeCCcchhhhHHHHHHhhhcCCCeEE-EEecCCccccCCCCCCCCC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGA-TATIVTTPVNAARFKTVLARALQCRLQIRL-IEIQFPWQEAGLPEGCENF 85 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh-~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~i~~~~~~~~~~~~~~~~ 85 (497)
|||++++. ..++...+..|+++|.++|+ +|.++.+.............. ++.+ ..++. ... .
T Consensus 1 mkIl~v~~-~~~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-------~~~--~- 64 (384)
T 1vgv_A 1 MKVLTVFG-TRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLF-----SIVPDYDLNI-------MQP--G- 64 (384)
T ss_dssp CEEEEEEC-SHHHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHHH-----TCCCSEECCC-------CST--T-
T ss_pred CeEEEEec-ccHHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHHc-----CCCCCcceec-------CCC--C-
Confidence 68888754 46778888999999999995 887665433222222222211 3322 22221 110 0
Q ss_pred CCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCC---CcchHHHHHHcCCCeEEEechhHHHHHHHHHhhhh
Q 044823 86 DMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMC---IPWTVDTAAKFNVPRIIFHGFSCFCLLCLDILRVS 162 (497)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~---~~~a~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~ 162 (497)
. ..... .......+.+++++ .+||+|++-.. .+.+..+|..+|+|++......
T Consensus 65 ---~--~~~~~----~~~~~~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~------------- 120 (384)
T 1vgv_A 65 ---Q--GLTEI----TCRILEGLKPILAE--FKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGL------------- 120 (384)
T ss_dssp ---S--CHHHH----HHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCC-------------
T ss_pred ---c--cHHHH----HHHHHHHHHHHHHH--hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc-------------
Confidence 0 11111 11223456777777 79999997432 2345567888999987632110
Q ss_pred cccCCCCCCCccccCCCCCCCcccccccCCCCCCCchHHHHHHHHHHhcccccEEEecchhhhhHHHHHHHHhhcC-Cce
Q 044823 163 KVHENVSSDSEYFKVPGFPHHIEFTKVQLPISPPTDELKEFNEKILAADKKTYGVIINTFEELESASVKEYKNAKQ-GKV 241 (497)
Q Consensus 163 ~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~-~~~ 241 (497)
. .. . .+... .....+... .+.++.+++.+-...+ .+. ....+ .++
T Consensus 121 -----------~----~~-~----~~~~~--------~~~~~~~~~--~~~~d~ii~~s~~~~~--~l~--~~g~~~~~i 166 (384)
T 1vgv_A 121 -----------R----TG-D----LYSPW--------PEEANRTLT--GHLAMYHFSPTETSRQ--NLL--RENVADSRI 166 (384)
T ss_dssp -----------C----CS-C----TTSST--------THHHHHHHH--HTTCSEEEESSHHHHH--HHH--HTTCCGGGE
T ss_pred -----------c----cc-c----ccCCC--------chHhhHHHH--HhhccEEEcCcHHHHH--HHH--HcCCChhhE
Confidence 0 00 0 00000 011111110 1336667766643222 111 11222 357
Q ss_pred EEeCcCcCCCccchhhhhcCCCCCCChhhhhhhhc-cCCCCeEEEEeeCCcccCCHhhHHHHHHHHHhC-----CCCeEE
Q 044823 242 WCIGPVSLCNKESLDKVERGNKAAIDIPECLTWLD-SQQPSSVVYVCLGSICNLTSSQLIELGLGLEAS-----KKPFIW 315 (497)
Q Consensus 242 ~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~ 315 (497)
..+|....+....... ..........++.+.+. -.+++++++++.|...... ..+..+++++... +.++++
T Consensus 167 ~vi~n~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i 243 (384)
T 1vgv_A 167 FITGNTVIDALLWVRD--QVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVY 243 (384)
T ss_dssp EECCCHHHHHHHHHHH--HTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEE
T ss_pred EEeCChHHHHHHhhhh--ccccchhhhHHHHHhccccCCCCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEE
Confidence 7777432111000000 00000000012223322 1123457888888765332 2344555555432 445555
Q ss_pred EEeCCCchhhhhhhhchhhHHHHhc-CCCeeeecccch---HhhhccCCccccccccCchhHHHHHHhCCcEeccCCccc
Q 044823 316 VSRVGNKLEELEKWLVEENFEERIK-GRGLLIRGWAPQ---VMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFTD 391 (497)
Q Consensus 316 ~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~v~~~~pq---~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~~D 391 (497)
..+.+.. +-+.+.+... .+++.+.+++++ ..+++.+++ ||+..| +.+.||+++|+|+|+.+..++
T Consensus 244 ~~g~~~~--------~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~ 312 (384)
T 1vgv_A 244 PVHLNPN--------VREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTE 312 (384)
T ss_dssp ECCBCHH--------HHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCS
T ss_pred EcCCCHH--------HHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCC
Confidence 4332210 1112222211 368988666653 568999999 998875 448899999999999987554
Q ss_pred chhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHH
Q 044823 392 QFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRA 453 (497)
Q Consensus 392 Q~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a 453 (497)
.. .+. +.|.|+.++ . ++++|.++|.++++|++..+.+.+++
T Consensus 313 ~~----e~v-~~g~g~lv~---------------~-d~~~la~~i~~ll~d~~~~~~~~~~~ 353 (384)
T 1vgv_A 313 RP----EAV-TAGTVRLVG---------------T-DKQRIVEEVTRLLKDENEYQAMSRAH 353 (384)
T ss_dssp CH----HHH-HHTSEEEEC---------------S-SHHHHHHHHHHHHHCHHHHHHHHSSC
T ss_pred cc----hhh-hCCceEEeC---------------C-CHHHHHHHHHHHHhChHHHhhhhhcc
Confidence 43 343 567887763 2 78899999999999874444444443
No 30
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.28 E-value=1e-08 Score=102.99 Aligned_cols=392 Identities=15% Similarity=0.080 Sum_probs=193.9
Q ss_pred CCcEEEEecCC-----CcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHH-----------HHHHhhhcCCCeEEEEe
Q 044823 6 SNFHFILLPFL-----AQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKT-----------VLARALQCRLQIRLIEI 69 (497)
Q Consensus 6 ~~~~vl~~~~p-----~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~-----------~~~~~~~~~~~i~~~~i 69 (497)
++|||++++.. .-|--.-+..||++|+++||+|+++++......-.. ..........++.++.+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 47899999843 345555688999999999999999996522110000 00000001135666666
Q ss_pred cCCccccCCCCCCCCCCCCC-chhH-HHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCCc--chHHHHHHcCCCeEEE
Q 044823 70 QFPWQEAGLPEGCENFDMLP-SIDL-AYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCIP--WTVDTAAKFNVPRIIF 145 (497)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~--~a~~~A~~lgIP~i~~ 145 (497)
+.+.. ....... ..+. ...+..........+..+++. ..+||+|.+..... .+..++...|+|+|..
T Consensus 81 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~ 151 (439)
T 3fro_A 81 GGGLL--------DSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLRE-EPLPDVVHFHDWHTVFAGALIKKYFKIPAVFT 151 (439)
T ss_dssp ESGGG--------GCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTT-SCCCSEEEEESGGGHHHHHHHHHHHCCCEEEE
T ss_pred cchhc--------cccccccCCcchhhhhhHHHHHHHHHHHHHHhcc-CCCCeEEEecchhhhhhHHHHhhccCCCEEEE
Confidence 52100 0000011 0011 112211222223333333321 37999999876432 3456778889998884
Q ss_pred echhHHHHHHHHHhhhhcccCCCCCCCccccCCCCCCCcc--cccccCCCCCCCchHHHHHHHHHHhcccccEEEecchh
Q 044823 146 HGFSCFCLLCLDILRVSKVHENVSSDSEYFKVPGFPHHIE--FTKVQLPISPPTDELKEFNEKILAADKKTYGVIINTFE 223 (497)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~ 223 (497)
....... .++.... ....+...... . ... ....+.++.++..|-.
T Consensus 152 ~h~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~-~---~~~---~~~~~~ad~ii~~S~~ 198 (439)
T 3fro_A 152 IHRLNKS--------------------------KLPAFYFHEAGLSELAPYPD-I---DPE---HTGGYIADIVTTVSRG 198 (439)
T ss_dssp ESCCCCC--------------------------CEEHHHHHHTTCGGGCCSSE-E---CHH---HHHHHHCSEEEESCHH
T ss_pred ecccccc--------------------------cCchHHhCccccccccccce-e---eHh---hhhhhhccEEEecCHH
Confidence 3221100 0000000 00000000000 0 011 1223456777777755
Q ss_pred hhhHHHHHHHHhhcCCceEEeCcCcCCCc-cchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCcc-c-CCHhhHH
Q 044823 224 ELESASVKEYKNAKQGKVWCIGPVSLCNK-ESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSIC-N-LTSSQLI 300 (497)
Q Consensus 224 ~l~~~~~~~~~~~~~~~~~~vGp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~-~-~~~~~~~ 300 (497)
..+. ....+ ...+.++..+..-+.... .+... ..........+.+-+.-. ++ .+++..|+.. . ...+.+.
T Consensus 199 ~~~~-~~~~~-~~~~~~i~vi~ngvd~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~-~~i~~~G~~~~~~Kg~~~li 271 (439)
T 3fro_A 199 YLID-EWGFF-RNFEGKITYVFNGIDCSFWNESYL---TGSRDERKKSLLSKFGMD-EG-VTFMFIGRFDRGQKGVDVLL 271 (439)
T ss_dssp HHHH-THHHH-GGGTTSEEECCCCCCTTTSCGGGS---CSCHHHHHHHHHHHHTCC-SC-EEEEEECCSSCTTBCHHHHH
T ss_pred HHHH-Hhhhh-hhcCCceeecCCCCCchhcCcccc---cchhhhhHHHHHHHcCCC-CC-cEEEEEcccccccccHHHHH
Confidence 3332 11111 112356666654322111 11000 000000012223333222 23 5677788876 3 3444444
Q ss_pred HHHHHHHh----CCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHh---hhccCCccccccc---cC-
Q 044823 301 ELGLGLEA----SKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVM---ILSHPAVGGFLTH---CG- 369 (497)
Q Consensus 301 ~~~~al~~----~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~---lL~~~~~~~~ItH---gG- 369 (497)
..++.+.. .+.++++. |.+... ..+. + ..+..+.. +++.+.+|+++.+ +++.+++ +|.- -|
T Consensus 272 ~a~~~l~~~~~~~~~~l~i~-G~g~~~--~~~~-l-~~~~~~~~-~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~ 343 (439)
T 3fro_A 272 KAIEILSSKKEFQEMRFIII-GKGDPE--LEGW-A-RSLEEKHG-NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPF 343 (439)
T ss_dssp HHHHHHHTSGGGGGEEEEEE-CCCCHH--HHHH-H-HHHHHHCT-TEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSS
T ss_pred HHHHHHHhcccCCCeEEEEE-cCCChh--HHHH-H-HHHHhhcC-CEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCc
Confidence 44454544 23444443 333211 0010 1 12222223 5666788898754 6888888 6622 23
Q ss_pred chhHHHHHHhCCcEeccCCcccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhc-CChhhHH
Q 044823 370 WNSSLEGISAGVQMLTWPLFTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMD-DGEERDG 448 (497)
Q Consensus 370 ~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~-~~~~~~~ 448 (497)
-+++.||+++|+|+|+.. .......+ .-|.|..++.. +.+++.++|.++++ |++..+.
T Consensus 344 ~~~~~EAma~G~Pvi~s~----~~~~~e~~--~~~~g~~~~~~---------------d~~~la~~i~~ll~~~~~~~~~ 402 (439)
T 3fro_A 344 GLVALEAMCLGAIPIASA----VGGLRDII--TNETGILVKAG---------------DPGELANAILKALELSRSDLSK 402 (439)
T ss_dssp CHHHHHHHHTTCEEEEES----STHHHHHC--CTTTCEEECTT---------------CHHHHHHHHHHHHHHTTTTTHH
T ss_pred cHHHHHHHHCCCCeEEcC----CCCcceeE--EcCceEEeCCC---------------CHHHHHHHHHHHHhcCHHHHHH
Confidence 368999999999999864 34455555 34688888655 78999999999998 8877777
Q ss_pred HHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhh
Q 044823 449 RRRRAKEFGELAKRALEEGGSSYNNIKFFHPRYHA 483 (497)
Q Consensus 449 ~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 483 (497)
+.+++++..+. -+....++.+++-+..
T Consensus 403 ~~~~~~~~~~~--------~s~~~~~~~~~~~~~~ 429 (439)
T 3fro_A 403 FRENCKKRAMS--------FSWEKSAERYVKAYTG 429 (439)
T ss_dssp HHHHHHHHHHT--------SCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhh--------CcHHHHHHHHHHHHHH
Confidence 77777776633 3444555555554443
No 31
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.27 E-value=6.7e-10 Score=114.16 Aligned_cols=376 Identities=13% Similarity=0.040 Sum_probs=185.9
Q ss_pred CCCCCCCcEEEEecCC---------------CcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhh---hHHHHHHhhhcCC
Q 044823 1 MASETSNFHFILLPFL---------------AQGHLIPMFDIARLLAQHGATATIVTTPVNAAR---FKTVLARALQCRL 62 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p---------------~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~---~~~~~~~~~~~~~ 62 (497)
|..+.++|||++++.. .-|.-..+..|++.|+++||+|++++....... +....+.. ....
T Consensus 1 m~~m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~-~~~~ 79 (499)
T 2r60_A 1 MVEMTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYY-QETN 79 (499)
T ss_dssp ------CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEEC-TTCS
T ss_pred CccccccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhc-cCCC
Confidence 6666667999999852 356678899999999999999999986532211 10000000 0024
Q ss_pred CeEEEEecCCccccCCCCCCCCCCCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCC--cchHHHHHHcCC
Q 044823 63 QIRLIEIQFPWQEAGLPEGCENFDMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCI--PWTVDTAAKFNV 140 (497)
Q Consensus 63 ~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~--~~a~~~A~~lgI 140 (497)
++.++.++.... ...... .....+. .+...+.++++....+||+|.+.... ..+..++..+|+
T Consensus 80 gv~v~~~~~~~~------~~~~~~--~~~~~~~-------~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~ 144 (499)
T 2r60_A 80 KVRIVRIPFGGD------KFLPKE--ELWPYLH-------EYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGL 144 (499)
T ss_dssp SEEEEEECCSCS------SCCCGG--GCGGGHH-------HHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCC
T ss_pred CeEEEEecCCCc------CCcCHH--HHHHHHH-------HHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCC
Confidence 688887753211 000000 0011111 11223445555422489999887532 234457788899
Q ss_pred CeEEEechhHHHHHHHHHhhhhcccCCCCCCCccccCCCCCCCcccccccCCCCCCCchHHHHHHHHHHhcccccEEEec
Q 044823 141 PRIIFHGFSCFCLLCLDILRVSKVHENVSSDSEYFKVPGFPHHIEFTKVQLPISPPTDELKEFNEKILAADKKTYGVIIN 220 (497)
Q Consensus 141 P~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 220 (497)
|+|............ .....+.... ..... ..+...........+.++.+++.
T Consensus 145 p~v~~~H~~~~~~~~------------------~~~~~~~~~~---~~~~~------~~~~~~~~~~~~~~~~ad~vi~~ 197 (499)
T 2r60_A 145 PFTFTGHSLGAQKME------------------KLNVNTSNFK---EMDER------FKFHRRIIAERLTMSYADKIIVS 197 (499)
T ss_dssp CEEEECSSCHHHHHH------------------TTCCCSTTSH---HHHHH------HCHHHHHHHHHHHHHHCSEEEES
T ss_pred cEEEEccCcccccch------------------hhccCCCCcc---hhhhh------HHHHHHHHHHHHHHhcCCEEEEC
Confidence 988643332211100 0000000000 00000 00000001112234567788877
Q ss_pred chhhhhHHHHHHHHhh--c--------CCceEEeCcCcCCCc-cchhhhhcCCCCCCChhhhhhhhc-----cCCCCeEE
Q 044823 221 TFEELESASVKEYKNA--K--------QGKVWCIGPVSLCNK-ESLDKVERGNKAAIDIPECLTWLD-----SQQPSSVV 284 (497)
Q Consensus 221 s~~~l~~~~~~~~~~~--~--------~~~~~~vGp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~vv 284 (497)
|-...+ .+... + +.++..|..-+.... .+... ......+.+-+. ..+++ .+
T Consensus 198 S~~~~~-----~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~~-------~~~~~~~r~~~~~~~~~~~~~~-~~ 264 (499)
T 2r60_A 198 TSQERF-----GQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYG-------DKIKAKITKYLERDLGSERMEL-PA 264 (499)
T ss_dssp SHHHHH-----HTTTSGGGTTTCCTTCGGGEEECCCCBCTTTSSSCCC-------HHHHHHHHHHHHHHSCGGGTTS-CE
T ss_pred CHHHHH-----HHHhhhcccccccccCCCCeEEECCCcChhhcCccch-------hhhHHHHHHHhcccccccCCCC-cE
Confidence 754322 11111 1 134555553222110 00000 000022222221 11122 35
Q ss_pred EEeeCCcccCCHhhHHHHHHHHHhCCC----C-eEEEEeCCCch----h-----h---hhhhhchhhHHHHh-cCCCeee
Q 044823 285 YVCLGSICNLTSSQLIELGLGLEASKK----P-FIWVSRVGNKL----E-----E---LEKWLVEENFEERI-KGRGLLI 346 (497)
Q Consensus 285 ~vs~GS~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~----~-----~---~~~~~lp~~~~~~~-~~~nv~v 346 (497)
++..|.... ...+..+++++..... . .++..|..... . . ..+ +- ....+. ..++|.+
T Consensus 265 i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~--l~-~~~~~~~l~~~V~~ 339 (499)
T 2r60_A 265 IIASSRLDQ--KKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGK--II-ELIDNNDCRGKVSM 339 (499)
T ss_dssp EEECSCCCG--GGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHH--HH-HHHHHTTCBTTEEE
T ss_pred EEEeecCcc--ccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHH--HH-HHHHhcCCCceEEE
Confidence 667777653 3445666777765421 2 34555541110 0 0 111 11 111222 2568999
Q ss_pred ecccchH---hhhccC----Ccccccc---ccCc-hhHHHHHHhCCcEeccCCcccchhhHHHHHHHHcceeEecccccc
Q 044823 347 RGWAPQV---MILSHP----AVGGFLT---HCGW-NSSLEGISAGVQMLTWPLFTDQFCNEKLIVEVLRIGVSVGVEVPM 415 (497)
Q Consensus 347 ~~~~pq~---~lL~~~----~~~~~It---HgG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~G~~l~~~~~~ 415 (497)
.+++|+. .+++.+ ++ +|. +-|+ .++.||+++|+|+|+... ......+ +.-+.|..++..
T Consensus 340 ~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~g~l~~~~--- 409 (499)
T 2r60_A 340 FPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEIL-DGGKYGVLVDPE--- 409 (499)
T ss_dssp EECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHT-GGGTSSEEECTT---
T ss_pred CCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHh-cCCceEEEeCCC---
Confidence 9999754 477788 77 663 2344 588999999999998753 4455556 355578888654
Q ss_pred ccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHH
Q 044823 416 KFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFGEL 459 (497)
Q Consensus 416 ~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~ 459 (497)
+.+++.++|.++++|++..+.+.+++++....
T Consensus 410 ------------d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~ 441 (499)
T 2r60_A 410 ------------DPEDIARGLLKAFESEETWSAYQEKGKQRVEE 441 (499)
T ss_dssp ------------CHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred ------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 78999999999999886666666666655443
No 32
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.22 E-value=6.6e-09 Score=102.17 Aligned_cols=162 Identities=12% Similarity=0.113 Sum_probs=105.3
Q ss_pred EEEEeeCCcccCCHhhHHHHHHHHHhCCC----C-eEEEEeCCCchhhhhhhhchhhHHHHh-cCCCeeeecccch-Hhh
Q 044823 283 VVYVCLGSICNLTSSQLIELGLGLEASKK----P-FIWVSRVGNKLEELEKWLVEENFEERI-KGRGLLIRGWAPQ-VMI 355 (497)
Q Consensus 283 vv~vs~GS~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~pq-~~l 355 (497)
.+++..|+... ...+..++++++.... . -++..|.+.. .. +. .+..+. ..+|+.+.++..+ ..+
T Consensus 197 ~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~-~~-----~~-~~~~~~~~~~~v~~~g~~~~~~~~ 267 (374)
T 2iw1_A 197 NLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDKP-RK-----FE-ALAEKLGVRSNVHFFSGRNDVSEL 267 (374)
T ss_dssp EEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC-HH-----HH-HHHHHHTCGGGEEEESCCSCHHHH
T ss_pred eEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCCH-HH-----HH-HHHHHcCCCCcEEECCCcccHHHH
Confidence 56677787653 3345666777776532 2 2334444321 11 11 111222 2468998888655 568
Q ss_pred hccCCcccccc----ccCchhHHHHHHhCCcEeccCCcccchhhHHHHHHHHcceeEeccccccccccccccccccCHHH
Q 044823 356 LSHPAVGGFLT----HCGWNSSLEGISAGVQMLTWPLFTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKED 431 (497)
Q Consensus 356 L~~~~~~~~It----HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~ 431 (497)
++.+++ +|. -|.-+++.||+++|+|+|+... ..+...+ +..+.|..+... -+.++
T Consensus 268 ~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i-~~~~~g~~~~~~--------------~~~~~ 326 (374)
T 2iw1_A 268 MAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYI-ADANCGTVIAEP--------------FSQEQ 326 (374)
T ss_dssp HHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHH-HHHTCEEEECSS--------------CCHHH
T ss_pred HHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhh-ccCCceEEeCCC--------------CCHHH
Confidence 888998 664 4556789999999999999755 4566777 488899988622 38899
Q ss_pred HHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHH
Q 044823 432 VETAINILMDDGEERDGRRRRAKEFGELAKRALEEGGSSYNNIKFFHP 479 (497)
Q Consensus 432 l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~ 479 (497)
+.++|.++++|++..+.+.+++++..+... -.+..+.+.++++
T Consensus 327 l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~ 369 (374)
T 2iw1_A 327 LNEVLRKALTQSPLRMAWAENARHYADTQD-----LYSLPEKAADIIT 369 (374)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHHSC-----CSCHHHHHHHHHH
T ss_pred HHHHHHHHHcChHHHHHHHHHHHHHHHHhh-----HHHHHHHHHHHHH
Confidence 999999999988777777777777665421 2334455555554
No 33
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.18 E-value=4.2e-09 Score=104.64 Aligned_cols=330 Identities=13% Similarity=0.099 Sum_probs=169.3
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhC-CCeEEEEeCCcchhhhHHHHHHhhhcCCCeEE-EEecCCccccCCCCCC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQH-GATATIVTTPVNAARFKTVLARALQCRLQIRL-IEIQFPWQEAGLPEGC 82 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~i~~~~~~~~~~~~~ 82 (497)
++++||++++ ++.....=+..|.++|.++ |+++.++.+....+......+. .++.. +.+. +...
T Consensus 23 ~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~-----~~i~~~~~l~-------~~~~- 88 (396)
T 3dzc_A 23 NAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLEL-----FSITPDFDLN-------IMEP- 88 (396)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHH-----TTCCCSEECC-------CCCT-
T ss_pred CCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHh-----cCCCCceeee-------cCCC-
Confidence 5567887766 6666677778899999988 8898766554333222222211 12210 1111 1111
Q ss_pred CCCCCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEEC--CCC-cchHHHHHHcCCCeEEEechhHHHHHHHHHh
Q 044823 83 ENFDMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISD--MCI-PWTVDTAAKFNVPRIIFHGFSCFCLLCLDIL 159 (497)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D--~~~-~~a~~~A~~lgIP~i~~~~~~~~~~~~~~~~ 159 (497)
. . .... .+......+.+++++ .+||+|++- ..+ +.+..+|..+|||.+.+...
T Consensus 89 ---~-~---~~~~----~~~~~~~~l~~~l~~--~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag----------- 144 (396)
T 3dzc_A 89 ---G-Q---TLNG----VTSKILLGMQQVLSS--EQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAG----------- 144 (396)
T ss_dssp ---T-C---CHHH----HHHHHHHHHHHHHHH--HCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCC-----------
T ss_pred ---C-C---CHHH----HHHHHHHHHHHHHHh--cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECC-----------
Confidence 0 0 1111 223345567778888 799999863 233 34567899999997753110
Q ss_pred hhhcccCCCCCCCccccCCCCCCCcccccccCCCCCCCchHHHHHHHHHHhcccccEEEecchhhhhHHHHHHHHhhc-C
Q 044823 160 RVSKVHENVSSDSEYFKVPGFPHHIEFTKVQLPISPPTDELKEFNEKILAADKKTYGVIINTFEELESASVKEYKNAK-Q 238 (497)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~-~ 238 (497)
+.. ..+ .... .....+... .+.++.+++.+-...+ .+ ..... +
T Consensus 145 --------------------~rs---~~~-----~~~~--~~~~~r~~~--~~~a~~~~~~se~~~~--~l--~~~G~~~ 188 (396)
T 3dzc_A 145 --------------------LRT---GNI-----YSPW--PEEGNRKLT--AALTQYHFAPTDTSRA--NL--LQENYNA 188 (396)
T ss_dssp --------------------CCC---SCT-----TSST--THHHHHHHH--HHTCSEEEESSHHHHH--HH--HHTTCCG
T ss_pred --------------------ccc---ccc-----ccCC--cHHHHHHHH--HHhcCEEECCCHHHHH--HH--HHcCCCc
Confidence 000 000 0000 011222211 1234555555533211 11 11222 2
Q ss_pred CceEEeCcCcCCCccch-hhhhcCCCCCCChhhhhhhhcc-CCCCeEEEEeeCCcccCCHhhHHHHHHHHHhC-----CC
Q 044823 239 GKVWCIGPVSLCNKESL-DKVERGNKAAIDIPECLTWLDS-QQPSSVVYVCLGSICNLTSSQLIELGLGLEAS-----KK 311 (497)
Q Consensus 239 ~~~~~vGp~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~-~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~-----~~ 311 (497)
.++..+|....+..... ....... ....++.+.+.- .+++++|+++.+-...... .+..+++|++.. +.
T Consensus 189 ~ki~vvGn~~~d~~~~~~~~~~~~~---~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~ 264 (396)
T 3dzc_A 189 ENIFVTGNTVIDALLAVREKIHTDM---DLQATLESQFPMLDASKKLILVTGHRRESFGG-GFERICQALITTAEQHPEC 264 (396)
T ss_dssp GGEEECCCHHHHHHHHHHHHHHHCH---HHHHHHHHTCTTCCTTSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTE
T ss_pred CcEEEECCcHHHHHHHhhhhcccch---hhHHHHHHHhCccCCCCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCc
Confidence 46888994322211000 0000000 000222222221 1234577777532222222 255667776542 45
Q ss_pred CeEEEEeCCCchhhhhhhhchhhHHHHh-cCCCeeeecccc---hHhhhccCCccccccccCchhHHHHHHhCCcEeccC
Q 044823 312 PFIWVSRVGNKLEELEKWLVEENFEERI-KGRGLLIRGWAP---QVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWP 387 (497)
Q Consensus 312 ~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~p---q~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P 387 (497)
++++..+.+.. +-+.+.+.. ..+++++.++++ ...+++.+++ +|+-.| |.+.||.++|+|+|+..
T Consensus 265 ~~v~~~g~~~~--------~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~ 333 (396)
T 3dzc_A 265 QILYPVHLNPN--------VREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMR 333 (396)
T ss_dssp EEEEECCBCHH--------HHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECC
T ss_pred eEEEEeCCChH--------HHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEcc
Confidence 66665543311 111222211 246888877764 4568889998 999987 66679999999999976
Q ss_pred CcccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCCh
Q 044823 388 LFTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGE 444 (497)
Q Consensus 388 ~~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 444 (497)
-..+++ .+. +.|.++.+. .++++|.+++.++++|++
T Consensus 334 ~~~~~~----e~v-~~G~~~lv~----------------~d~~~l~~ai~~ll~d~~ 369 (396)
T 3dzc_A 334 ETTERP----EAV-AAGTVKLVG----------------TNQQQICDALSLLLTDPQ 369 (396)
T ss_dssp SSCSCH----HHH-HHTSEEECT----------------TCHHHHHHHHHHHHHCHH
T ss_pred CCCcch----HHH-HcCceEEcC----------------CCHHHHHHHHHHHHcCHH
Confidence 555553 243 677775442 268999999999998873
No 34
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.16 E-value=6.4e-09 Score=103.51 Aligned_cols=323 Identities=13% Similarity=0.059 Sum_probs=166.4
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHHHHHhhhcCCCeEE-EEecCCccccCCCCC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQH--GATATIVTTPVNAARFKTVLARALQCRLQIRL-IEIQFPWQEAGLPEG 81 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~i~~~~~~~~~~~~ 81 (497)
|++|||++++ ++.....=+-.|.++|.++ |+++.++.+....+......+. .++.. +.+ .+...
T Consensus 25 m~~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~-----~~i~~~~~l-------~v~~~ 91 (403)
T 3ot5_A 25 MAKIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEI-----FDIKPDIDL-------DIMKK 91 (403)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHH-----TTCCCSEEC-------CCCC-
T ss_pred cccceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHh-----cCCCCCccc-------ccCCC
Confidence 5567888776 5555566668899999988 6888766554322222222211 12211 111 11111
Q ss_pred CCCCCCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECC--CC-cchHHHHHHcCCCeEEEechhHHHHHHHHH
Q 044823 82 CENFDMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDM--CI-PWTVDTAAKFNVPRIIFHGFSCFCLLCLDI 158 (497)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~--~~-~~a~~~A~~lgIP~i~~~~~~~~~~~~~~~ 158 (497)
. . ... ..+......+.+++++ .+||+|++-. .. +++..+|.++|||.+.+...
T Consensus 92 ~------~--~~~----~~~~~~~~~l~~~l~~--~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ag---------- 147 (403)
T 3ot5_A 92 G------Q--TLA----EITSRVMNGINEVIAA--ENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAG---------- 147 (403)
T ss_dssp C------C--CHH----HHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCC----------
T ss_pred C------C--CHH----HHHHHHHHHHHHHHHH--cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECC----------
Confidence 0 0 111 1233345567778888 7999998632 22 34577899999997753110
Q ss_pred hhhhcccCCCCCCCccccCCCCCCCcccccccCCCCCCCchHHHHHHHHHHhcccccEEEecchhhhhHHHHHHHHhhc-
Q 044823 159 LRVSKVHENVSSDSEYFKVPGFPHHIEFTKVQLPISPPTDELKEFNEKILAADKKTYGVIINTFEELESASVKEYKNAK- 237 (497)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~- 237 (497)
+. .+. ++... .....+.... +.++.+++.+-...+ .+ .....
T Consensus 148 ---------------------lr-----s~~---~~~~~--p~~~~r~~~~--~~a~~~~~~se~~~~--~l--~~~Gi~ 190 (403)
T 3ot5_A 148 ---------------------LR-----TWN---KYSPF--PEEMNRQLTG--VMADIHFSPTKQAKE--NL--LAEGKD 190 (403)
T ss_dssp ---------------------CC-----CSC---TTSST--THHHHHHHHH--HHCSEEEESSHHHHH--HH--HHTTCC
T ss_pred ---------------------cc-----ccc---cccCC--cHHHHHHHHH--HhcCEEECCCHHHHH--HH--HHcCCC
Confidence 00 000 00000 0111222111 223445554433211 11 11222
Q ss_pred CCceEEeCcCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCcccCCHhhHHHHHHHHHh-----CCCC
Q 044823 238 QGKVWCIGPVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEA-----SKKP 312 (497)
Q Consensus 238 ~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~-----~~~~ 312 (497)
+.+++.+|....+.... .... ....+..+.+ +++++++++.|...... +.+..++++++. .+.+
T Consensus 191 ~~~i~vvGn~~~D~~~~----~~~~---~~~~~~~~~l---~~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~ 259 (403)
T 3ot5_A 191 PATIFVTGNTAIDALKT----TVQK---DYHHPILENL---GDNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTE 259 (403)
T ss_dssp GGGEEECCCHHHHHHHH----HSCT---TCCCHHHHSC---TTCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEE
T ss_pred cccEEEeCCchHHHHHh----hhhh---hcchHHHHhc---cCCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCce
Confidence 25688899432221100 0000 0011222222 33457877765422211 124556666553 2456
Q ss_pred eEEEEeCCCchhhhhhhhchhhHHHHh-cCCCeeeecccc---hHhhhccCCccccccccCchhHHHHHHhCCcEeccCC
Q 044823 313 FIWVSRVGNKLEELEKWLVEENFEERI-KGRGLLIRGWAP---QVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPL 388 (497)
Q Consensus 313 ~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~p---q~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~ 388 (497)
+++..+.+.. +-+.+.+.. ..+++++.++++ ...+++.+++ +|+-.| |.+.||.++|+|+|+.|-
T Consensus 260 ~v~~~~~~~~--------~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~g~PvV~~~~ 328 (403)
T 3ot5_A 260 LVYPMHLNPA--------VREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYL--VFTDSG-GVQEEAPGMGVPVLVLRD 328 (403)
T ss_dssp EEEECCSCHH--------HHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEE--EEECCH-HHHHHGGGTTCCEEECCS
T ss_pred EEEecCCCHH--------HHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHhCCCEEEecC
Confidence 6666543211 111122211 246899989886 3568888888 998875 223699999999999987
Q ss_pred cccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCCh
Q 044823 389 FTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGE 444 (497)
Q Consensus 389 ~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 444 (497)
.++++. +. +.|.|+.+. .++++|.+++.++++|++
T Consensus 329 ~~~~~e----~v-~~g~~~lv~----------------~d~~~l~~ai~~ll~~~~ 363 (403)
T 3ot5_A 329 TTERPE----GI-EAGTLKLIG----------------TNKENLIKEALDLLDNKE 363 (403)
T ss_dssp SCSCHH----HH-HHTSEEECC----------------SCHHHHHHHHHHHHHCHH
T ss_pred CCcchh----he-eCCcEEEcC----------------CCHHHHHHHHHHHHcCHH
Confidence 777664 33 678776653 378899999999998863
No 35
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.10 E-value=5.3e-08 Score=96.58 Aligned_cols=333 Identities=11% Similarity=0.080 Sum_probs=175.1
Q ss_pred CcEEEEecCCC-cCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCCCCC
Q 044823 7 NFHFILLPFLA-QGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGCENF 85 (497)
Q Consensus 7 ~~~vl~~~~p~-~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~ 85 (497)
++++....+|. -|.-.-...|++.|+++||+|++++...... .. ....++.+..++.... +. .
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~-------~~~~~i~~~~~~~~~~----~~----~ 78 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LN-------KVYPNIYFHEVTVNQY----SV----F 78 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC------------CCCTTEEEECCCCC------------C
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-cc-------ccCCceEEEecccccc----cc----c
Confidence 46777777775 4566778899999999999999998753211 10 1223566665542111 00 0
Q ss_pred CCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCCc--chHHHHH-Hc--CCCeEEEechhHHHHHHHHHhh
Q 044823 86 DMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCIP--WTVDTAA-KF--NVPRIIFHGFSCFCLLCLDILR 160 (497)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~--~a~~~A~-~l--gIP~i~~~~~~~~~~~~~~~~~ 160 (497)
...... + .....+.+++++ .+||+|++..... ....++. .+ ++|++..........
T Consensus 79 -~~~~~~-~--------~~~~~l~~~l~~--~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~------- 139 (394)
T 2jjm_A 79 -QYPPYD-L--------ALASKMAEVAQR--ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITV------- 139 (394)
T ss_dssp -CSCCHH-H--------HHHHHHHHHHHH--HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHT-------
T ss_pred -cccccc-H--------HHHHHHHHHHHH--cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccc-------
Confidence 000101 0 122345566777 7999999875432 2233444 33 599877533321100
Q ss_pred hhcccCCCCCCCccccCCCCCCCcccccccCCCCCCCchHHHHHHHHHHhcccccEEEecchhhhhHHHHHHHHhhc--C
Q 044823 161 VSKVHENVSSDSEYFKVPGFPHHIEFTKVQLPISPPTDELKEFNEKILAADKKTYGVIINTFEELESASVKEYKNAK--Q 238 (497)
Q Consensus 161 ~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~--~ 238 (497)
.+... .+..... ...+.++.+++.+-...+ .+...+ +
T Consensus 140 -----------------~~~~~----------------~~~~~~~---~~~~~ad~ii~~s~~~~~-----~~~~~~~~~ 178 (394)
T 2jjm_A 140 -----------------LGSDP----------------SLNNLIR---FGIEQSDVVTAVSHSLIN-----ETHELVKPN 178 (394)
T ss_dssp -----------------TTTCT----------------TTHHHHH---HHHHHSSEEEESCHHHHH-----HHHHHTCCS
T ss_pred -----------------cCCCH----------------HHHHHHH---HHHhhCCEEEECCHHHHH-----HHHHhhCCc
Confidence 00000 0111111 123456777777754322 122222 2
Q ss_pred CceEEeCcCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCcccCCHhhHHHHHHHHHh----CCCCeE
Q 044823 239 GKVWCIGPVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEA----SKKPFI 314 (497)
Q Consensus 239 ~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~----~~~~~i 314 (497)
.++..+..-.....-.. .....+.+-+.-.++ ..+++..|.... ...+..++++++. .+.+++
T Consensus 179 ~~~~vi~ngv~~~~~~~----------~~~~~~~~~~~~~~~-~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~ 245 (394)
T 2jjm_A 179 KDIQTVYNFIDERVYFK----------RDMTQLKKEYGISES-EKILIHISNFRK--VKRVQDVVQAFAKIVTEVDAKLL 245 (394)
T ss_dssp SCEEECCCCCCTTTCCC----------CCCHHHHHHTTCC----CEEEEECCCCG--GGTHHHHHHHHHHHHHSSCCEEE
T ss_pred ccEEEecCCccHHhcCC----------cchHHHHHHcCCCCC-CeEEEEeecccc--ccCHHHHHHHHHHHHhhCCCEEE
Confidence 46766664432211000 011222222221111 235566777653 2233344444442 244443
Q ss_pred EEEeCCCchhhhhhhhchhhHHHHhc-CCCeeeecccch-HhhhccCCccccc----cccCchhHHHHHHhCCcEeccCC
Q 044823 315 WVSRVGNKLEELEKWLVEENFEERIK-GRGLLIRGWAPQ-VMILSHPAVGGFL----THCGWNSSLEGISAGVQMLTWPL 388 (497)
Q Consensus 315 ~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~v~~~~pq-~~lL~~~~~~~~I----tHgG~gs~~eal~~GvP~l~~P~ 388 (497)
..|.+....... ....+.. .++|.+.++..+ ..++..+++ +| .-|.-+++.||+++|+|+|+.+.
T Consensus 246 -i~G~g~~~~~l~------~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~ 316 (394)
T 2jjm_A 246 -LVGDGPEFCTIL------QLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRV 316 (394)
T ss_dssp -EECCCTTHHHHH------HHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECC
T ss_pred -EECCchHHHHHH------HHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecC
Confidence 344332211111 1111111 467888887654 568999998 77 44556789999999999999765
Q ss_pred cccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHH
Q 044823 389 FTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFG 457 (497)
Q Consensus 389 ~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~ 457 (497)
. .....+ +..+.|...+.. +.+++.++|.++++|++..+.+.+++++..
T Consensus 317 ~----~~~e~v-~~~~~g~~~~~~---------------d~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 365 (394)
T 2jjm_A 317 G----GIPEVI-QHGDTGYLCEVG---------------DTTGVADQAIQLLKDEELHRNMGERARESV 365 (394)
T ss_dssp T----TSTTTC-CBTTTEEEECTT---------------CHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred C----ChHHHh-hcCCceEEeCCC---------------CHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 3 333444 355677777644 789999999999998766666666666654
No 36
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.09 E-value=7.4e-09 Score=100.72 Aligned_cols=125 Identities=10% Similarity=0.100 Sum_probs=81.7
Q ss_pred EEEeeCCcccCCHhhHHHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchH---hhhccCC
Q 044823 284 VYVCLGSICNLTSSQLIELGLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQV---MILSHPA 360 (497)
Q Consensus 284 v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~---~lL~~~~ 360 (497)
+++..|+.. ....+..++++++..+.++++.- .+..... + ..+..+.. +++.+.+|+++. .++..++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G-~g~~~~~-----l-~~~~~~~~-~~v~~~g~~~~~~l~~~~~~ad 233 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAG-PAWEPEY-----F-DEITRRYG-STVEPIGEVGGERRLDLLASAH 233 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEES-CCCCHHH-----H-HHHHHHHT-TTEEECCCCCHHHHHHHHHHCS
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEe-CcccHHH-----H-HHHHHHhC-CCEEEeccCCHHHHHHHHHhCC
Confidence 344567665 33445667777777777766653 3322211 1 12223333 799999999975 6888999
Q ss_pred ccccc--cc-----------cCc-hhHHHHHHhCCcEeccCCcccchhhHHHHHHH--HcceeEeccccccccccccccc
Q 044823 361 VGGFL--TH-----------CGW-NSSLEGISAGVQMLTWPLFTDQFCNEKLIVEV--LRIGVSVGVEVPMKFGEEEKIG 424 (497)
Q Consensus 361 ~~~~I--tH-----------gG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~--~G~G~~l~~~~~~~~~~~~~~~ 424 (497)
+ +| +. -|+ +++.||+++|+|+|+... ..+...+ +. -+.|... .
T Consensus 234 v--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~-~~~~~~~g~~~--~------------ 292 (342)
T 2iuy_A 234 A--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIV-PSVGEVVGYGT--D------------ 292 (342)
T ss_dssp E--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHG-GGGEEECCSSS--C------------
T ss_pred E--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHh-cccCCCceEEc--C------------
Confidence 8 65 32 344 579999999999999765 3455555 34 3455544 2
Q ss_pred cccCHHHHHHHHHHHhc
Q 044823 425 VLVKKEDVETAINILMD 441 (497)
Q Consensus 425 ~~~~~~~l~~ai~~vl~ 441 (497)
. +.+++.++|.++++
T Consensus 293 -~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 293 -F-APDEARRTLAGLPA 307 (342)
T ss_dssp -C-CHHHHHHHHHTSCC
T ss_pred -C-CHHHHHHHHHHHHH
Confidence 4 78999999999885
No 37
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.07 E-value=2.9e-08 Score=97.70 Aligned_cols=330 Identities=13% Similarity=0.078 Sum_probs=169.6
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhC-C-CeEEEEeCCcchhhhHHHHHHhhhcCCCeEE-EEecCCccccCCCCC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQH-G-ATATIVTTPVNAARFKTVLARALQCRLQIRL-IEIQFPWQEAGLPEG 81 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r-G-h~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~i~~~~~~~~~~~~ 81 (497)
+++|||++++ ++.++......++++|+++ | |+|.++++.............. ++.. +.+.. ..
T Consensus 6 ~~~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-------~~- 71 (375)
T 3beo_A 6 TERLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSIF-----GITPDFDLNI-------MK- 71 (375)
T ss_dssp SSCEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHHH-----TCCCSEECCC-------CC-
T ss_pred CcCceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHHc-----CCCCcccccc-------CC-
Confidence 4568999997 4467888888999999987 5 8888777654433222221111 2221 11110 00
Q ss_pred CCCCCCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCCc---chHHHHHHcCCCeEEEechhHHHHHHHHH
Q 044823 82 CENFDMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCIP---WTVDTAAKFNVPRIIFHGFSCFCLLCLDI 158 (497)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~---~a~~~A~~lgIP~i~~~~~~~~~~~~~~~ 158 (497)
. .. ...... ......+.+++++ .+||+|++....+ .+..++...|+|++.+....
T Consensus 72 -~---~~---~~~~~~----~~~~~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~--------- 129 (375)
T 3beo_A 72 -D---RQ---TLIDIT----TRGLEGLDKVMKE--AKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL--------- 129 (375)
T ss_dssp -T---TC---CHHHHH----HHHHHHHHHHHHH--HCCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC---------
T ss_pred -C---cc---cHHHHH----HHHHHHHHHHHHH--hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc---------
Confidence 0 00 111111 1123346667777 7999999854322 33467788999988531100
Q ss_pred hhhhcccCCCCCCCccccCCCCCCCcccccccCCCCCCCchHHHHHHHHHHhcccccEEEecchhhhhHHHHHHHHhhcC
Q 044823 159 LRVSKVHENVSSDSEYFKVPGFPHHIEFTKVQLPISPPTDELKEFNEKILAADKKTYGVIINTFEELESASVKEYKNAKQ 238 (497)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~ 238 (497)
. ... ..... ...+.+... .+.++.+++.+-...+ .+. ....+
T Consensus 130 ---------------~----~~~-----~~~~~--------~~~~~~~~~--~~~~d~ii~~s~~~~~--~~~--~~g~~ 171 (375)
T 3beo_A 130 ---------------R----TWD-----KYSPY--------PEEMNRQLT--GVMADLHFSPTAKSAT--NLQ--KENKD 171 (375)
T ss_dssp ---------------C----CSC-----TTSST--------THHHHHHHH--HHHCSEEEESSHHHHH--HHH--HTTCC
T ss_pred ---------------c----ccc-----ccCCC--------hhHhhhhHH--hhhhheeeCCCHHHHH--HHH--HcCCC
Confidence 0 000 00000 011122111 1225666766544322 111 11222
Q ss_pred -CceEEeCcCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCcccCCHhhHHHHHHHHHhC-----CCC
Q 044823 239 -GKVWCIGPVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEAS-----KKP 312 (497)
Q Consensus 239 -~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~-----~~~ 312 (497)
.++..+|....+.... . ... ....++.+-+ +++++++++.|...... ..+..++++++.. +.+
T Consensus 172 ~~~i~vi~n~~~d~~~~----~-~~~--~~~~~~~~~~---~~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~ 240 (375)
T 3beo_A 172 ESRIFITGNTAIDALKT----T-VKE--TYSHPVLEKL---GNNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQ 240 (375)
T ss_dssp GGGEEECCCHHHHHHHH----H-CCS--SCCCHHHHTT---TTSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEE
T ss_pred cccEEEECChhHhhhhh----h-hhh--hhhHHHHHhc---cCCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeE
Confidence 3577777431111000 0 000 0011222222 23456777777654322 2345566666532 344
Q ss_pred eEEEEeCCCchhhhhhhhchhhHHHHhc-CCCeeeecccch---HhhhccCCccccccccCchhHHHHHHhCCcEeccCC
Q 044823 313 FIWVSRVGNKLEELEKWLVEENFEERIK-GRGLLIRGWAPQ---VMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPL 388 (497)
Q Consensus 313 ~i~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~v~~~~pq---~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~ 388 (497)
+++ +.+... . +-+.+.+... .+++.+.+++++ ..+++.+++ ||+..| +.+.||+++|+|+|+...
T Consensus 241 ~i~--~~g~~~-~-----~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~ 309 (375)
T 3beo_A 241 VVY--PVHMNP-V-----VRETANDILGDYGRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRD 309 (375)
T ss_dssp EEE--ECCSCH-H-----HHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSS
T ss_pred EEE--eCCCCH-H-----HHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecC
Confidence 443 332211 1 1112222222 368998777664 568888998 898864 458899999999999865
Q ss_pred cccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHH
Q 044823 389 FTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRR 451 (497)
Q Consensus 389 ~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~ 451 (497)
.+..+ .+. +.|.|..++ .+++++.++|.++++|++..+.+.+
T Consensus 310 ~~~~~----e~v-~~g~g~~v~----------------~d~~~la~~i~~ll~~~~~~~~~~~ 351 (375)
T 3beo_A 310 TTERP----EGI-EAGTLKLAG----------------TDEETIFSLADELLSDKEAHDKMSK 351 (375)
T ss_dssp CCSCH----HHH-HTTSEEECC----------------SCHHHHHHHHHHHHHCHHHHHHHCC
T ss_pred CCCCc----eee-cCCceEEcC----------------CCHHHHHHHHHHHHhChHhHhhhhh
Confidence 44432 233 567777663 2778999999999988743333333
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.04 E-value=1.2e-07 Score=94.67 Aligned_cols=93 Identities=13% Similarity=-0.033 Sum_probs=67.2
Q ss_pred CCCeeeecccc---h---HhhhccCCcccccccc----CchhHHHHHHhCCcEeccCCcccchhhHHHHHHHHcceeEec
Q 044823 341 GRGLLIRGWAP---Q---VMILSHPAVGGFLTHC----GWNSSLEGISAGVQMLTWPLFTDQFCNEKLIVEVLRIGVSVG 410 (497)
Q Consensus 341 ~~nv~v~~~~p---q---~~lL~~~~~~~~ItHg----G~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~G~~l~ 410 (497)
.++|.+.+|++ + ..+++.+++ +|.-. .-+++.||+++|+|+|+.+. ..+...+ +.-+.|...+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEEC
Confidence 47899988876 2 457888888 66433 34688999999999999664 4455555 3556676663
Q ss_pred cccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHH
Q 044823 411 VEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFG 457 (497)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~ 457 (497)
+.+++.++|.++++|++..+.+.+++++..
T Consensus 365 -----------------d~~~la~~i~~ll~~~~~~~~~~~~a~~~~ 394 (416)
T 2x6q_A 365 -----------------DANEAVEVVLYLLKHPEVSKEMGAKAKERV 394 (416)
T ss_dssp -----------------SHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred -----------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 567899999999998866666666665544
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.91 E-value=5e-08 Score=96.25 Aligned_cols=324 Identities=14% Similarity=0.084 Sum_probs=172.0
Q ss_pred CcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchh-hhHHHHHHhhhcCCCeEEEEecCCccccCCCCCCCCC
Q 044823 7 NFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAA-RFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGCENF 85 (497)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~ 85 (497)
+++|+++ ++++-.+.=+-+|.++|.++ +++.++.+..... .+.+... . ++. ++.|... +..
T Consensus 9 ~~~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~----~--~~~---i~~~~~~--l~~----- 70 (385)
T 4hwg_A 9 MLKVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFF----D--DMG---IRKPDYF--LEV----- 70 (385)
T ss_dssp CCEEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHH----C---CC---CCCCSEE--CCC-----
T ss_pred hhheeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHH----h--hCC---CCCCcee--cCC-----
Confidence 4566554 67777788888888888887 8988776654332 2222210 1 111 1111111 111
Q ss_pred CCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEE--CCCCcchHHHHHHcCCCeEEEechhHHHHHHHHHhhhhc
Q 044823 86 DMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIIS--DMCIPWTVDTAAKFNVPRIIFHGFSCFCLLCLDILRVSK 163 (497)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~--D~~~~~a~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~ 163 (497)
... .. ...+......+.+++++ .+||+||+ |..+.++..+|.++|||.+.+...
T Consensus 71 ~~~---~~----~~~~~~~~~~l~~~l~~--~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eag--------------- 126 (385)
T 4hwg_A 71 AAD---NT----AKSIGLVIEKVDEVLEK--EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG--------------- 126 (385)
T ss_dssp CCC---CS----HHHHHHHHHHHHHHHHH--HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCC---------------
T ss_pred CCC---CH----HHHHHHHHHHHHHHHHh--cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCC---------------
Confidence 101 11 12233345667788888 79999875 334445588999999997653110
Q ss_pred ccCCCCCCCccccCCCCCCCcccccccCCCCCCCchHHHHHHHHHHhcccccEEEecchhhhhHHHHHHHHhhc-CCceE
Q 044823 164 VHENVSSDSEYFKVPGFPHHIEFTKVQLPISPPTDELKEFNEKILAADKKTYGVIINTFEELESASVKEYKNAK-QGKVW 242 (497)
Q Consensus 164 ~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~-~~~~~ 242 (497)
..+.+. .+| ....+.... +.++.+++.+-..-+ .+ .+... +.+++
T Consensus 127 ----lrs~~~-----~~p-------------------ee~nR~~~~--~~a~~~~~~te~~~~--~l--~~~G~~~~~I~ 172 (385)
T 4hwg_A 127 ----NRCFDQ-----RVP-------------------EEINRKIID--HISDVNITLTEHARR--YL--IAEGLPAELTF 172 (385)
T ss_dssp ----CCCSCT-----TST-------------------HHHHHHHHH--HHCSEEEESSHHHHH--HH--HHTTCCGGGEE
T ss_pred ----Cccccc-----cCc-------------------HHHHHHHHH--hhhceeecCCHHHHH--HH--HHcCCCcCcEE
Confidence 000000 001 011222111 223444554433211 11 11222 24688
Q ss_pred EeCcCcCCCccch-hhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCcccCC-HhhHHHHHHHHHhC----CCCeEEE
Q 044823 243 CIGPVSLCNKESL-DKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSICNLT-SSQLIELGLGLEAS----KKPFIWV 316 (497)
Q Consensus 243 ~vGp~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~-~~~~~~~~~al~~~----~~~~i~~ 316 (497)
.+|-...+..... ... ..+++.+-+.-.+ +++|+++.|...... .+.+..+++++... +.++|+.
T Consensus 173 vtGnp~~D~~~~~~~~~--------~~~~~~~~lgl~~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p 243 (385)
T 4hwg_A 173 KSGSHMPEVLDRFMPKI--------LKSDILDKLSLTP-KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFS 243 (385)
T ss_dssp ECCCSHHHHHHHHHHHH--------HHCCHHHHTTCCT-TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEE
T ss_pred EECCchHHHHHHhhhhc--------chhHHHHHcCCCc-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 9994322211000 000 0122333333222 458889988764333 34566777777643 5677776
Q ss_pred EeCCCchhhhhhhhchhhHHHH---h-cCCCeeeecccc---hHhhhccCCccccccccCchhHHHHHHhCCcEeccCCc
Q 044823 317 SRVGNKLEELEKWLVEENFEER---I-KGRGLLIRGWAP---QVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLF 389 (497)
Q Consensus 317 ~~~~~~~~~~~~~~lp~~~~~~---~-~~~nv~v~~~~p---q~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~ 389 (497)
.... ..+ .+.+. . ..+|+++.+.++ ...+++++++ +||-.|. .+.||.+.|+|+|+++..
T Consensus 244 ~~p~-----~~~-----~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ 310 (385)
T 4hwg_A 244 THPR-----TKK-----RLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREA 310 (385)
T ss_dssp ECHH-----HHH-----HHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSS
T ss_pred CChH-----HHH-----HHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCC
Confidence 5321 111 11111 1 135787765554 4578999998 9998875 468999999999999876
Q ss_pred ccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHH
Q 044823 390 TDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGR 449 (497)
Q Consensus 390 ~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~ 449 (497)
.+.+. .. +.|.++.++ .++++|.+++.++++|++..+.+
T Consensus 311 ter~e----~v-~~G~~~lv~----------------~d~~~i~~ai~~ll~d~~~~~~m 349 (385)
T 4hwg_A 311 HERPE----GM-DAGTLIMSG----------------FKAERVLQAVKTITEEHDNNKRT 349 (385)
T ss_dssp CSCTH----HH-HHTCCEECC----------------SSHHHHHHHHHHHHTTCBTTBCC
T ss_pred ccchh----hh-hcCceEEcC----------------CCHHHHHHHHHHHHhChHHHHHh
Confidence 54332 23 678776552 37889999999999987443333
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.75 E-value=5.4e-07 Score=96.49 Aligned_cols=95 Identities=7% Similarity=0.056 Sum_probs=65.4
Q ss_pred CCCeeeec----ccchHhhhc----cCCccccccc---cCc-hhHHHHHHhCCcEeccCCcccchhhHHHHHHHHcceeE
Q 044823 341 GRGLLIRG----WAPQVMILS----HPAVGGFLTH---CGW-NSSLEGISAGVQMLTWPLFTDQFCNEKLIVEVLRIGVS 408 (497)
Q Consensus 341 ~~nv~v~~----~~pq~~lL~----~~~~~~~ItH---gG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~G~~ 408 (497)
.++|.+.+ ++++..+.. .+++ ||.- -|+ .++.||+++|+|+|+. |.......+ +.-+.|+.
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV-~dg~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEII-VHGKSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHC-CBTTTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHH-ccCCcEEE
Confidence 47888887 445455443 3456 6632 233 5899999999999995 555566666 36667888
Q ss_pred eccccccccccccccccccCHHHHHHHHHHHh----cCChhhHHHHHHHHHHH
Q 044823 409 VGVEVPMKFGEEEKIGVLVKKEDVETAINILM----DDGEERDGRRRRAKEFG 457 (497)
Q Consensus 409 l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl----~~~~~~~~~~~~a~~~~ 457 (497)
++.. +.+++.++|.+++ +|++..+.+.+++++..
T Consensus 712 v~p~---------------D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a 749 (816)
T 3s28_A 712 IDPY---------------HGDQAADTLADFFTKCKEDPSHWDEISKGGLQRI 749 (816)
T ss_dssp ECTT---------------SHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHH
T ss_pred eCCC---------------CHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 8655 7888888887666 88866666666666544
No 41
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.64 E-value=1.8e-06 Score=87.99 Aligned_cols=142 Identities=8% Similarity=-0.024 Sum_probs=82.3
Q ss_pred EEEeeCCccc-CCHhhHHHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCee-eecccchH--hhhccC
Q 044823 284 VYVCLGSICN-LTSSQLIELGLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLL-IRGWAPQV--MILSHP 359 (497)
Q Consensus 284 v~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~-v~~~~pq~--~lL~~~ 359 (497)
+++..|.... ...+.+...+..+.+.+.+++++-.+.... ... + ..+..+. .+++. +.++-.+. .+++.+
T Consensus 293 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~--~~~--l-~~~~~~~-~~~v~~~~g~~~~~~~~~~~~a 366 (485)
T 1rzu_A 293 LFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVAL--EGA--L-LAAASRH-HGRVGVAIGYNEPLSHLMQAGC 366 (485)
T ss_dssp EEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHH--HHH--H-HHHHHHT-TTTEEEEESCCHHHHHHHHHHC
T ss_pred EEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHH--HHH--H-HHHHHhC-CCcEEEecCCCHHHHHHHHhcC
Confidence 6677788764 223333333333333456655554332110 001 1 1122222 36786 67884332 578888
Q ss_pred Ccccccc----ccCchhHHHHHHhCCcEeccCCcccchhhHHHHHHHH---------cceeEeccccccccccccccccc
Q 044823 360 AVGGFLT----HCGWNSSLEGISAGVQMLTWPLFTDQFCNEKLIVEVL---------RIGVSVGVEVPMKFGEEEKIGVL 426 (497)
Q Consensus 360 ~~~~~It----HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~---------G~G~~l~~~~~~~~~~~~~~~~~ 426 (497)
++ ||. -|.-.+++||+++|+|+|+... ......+ +.- +.|...+..
T Consensus 367 dv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~~~-------------- 425 (485)
T 1rzu_A 367 DA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAATGVQFSPV-------------- 425 (485)
T ss_dssp SE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEESSC--------------
T ss_pred CE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCcceEeCCC--------------
Confidence 88 663 2334589999999999999654 3445455 243 577777544
Q ss_pred cCHHHHHHHHHHHh---cCChhhHHHHHHH
Q 044823 427 VKKEDVETAINILM---DDGEERDGRRRRA 453 (497)
Q Consensus 427 ~~~~~l~~ai~~vl---~~~~~~~~~~~~a 453 (497)
+.+++.++|.+++ +|++..+.+.+++
T Consensus 426 -d~~~la~~i~~ll~~~~~~~~~~~~~~~~ 454 (485)
T 1rzu_A 426 -TLDGLKQAIRRTVRYYHDPKLWTQMQKLG 454 (485)
T ss_dssp -SHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 7899999999999 6764444444444
No 42
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.58 E-value=2.3e-06 Score=87.18 Aligned_cols=141 Identities=12% Similarity=-0.012 Sum_probs=81.6
Q ss_pred EEEEeeCCcccCCHhhHHHHHHHHH---hCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCee-eecccch--Hhhh
Q 044823 283 VVYVCLGSICNLTSSQLIELGLGLE---ASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLL-IRGWAPQ--VMIL 356 (497)
Q Consensus 283 vv~vs~GS~~~~~~~~~~~~~~al~---~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~-v~~~~pq--~~lL 356 (497)
.+++..|.... ..-+..++++++ +.+.+++++-.+.... ... + ..+..+. .+++. +.++..+ ..++
T Consensus 293 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~--~~~--l-~~~~~~~-~~~v~~~~g~~~~~~~~~~ 364 (485)
T 2qzs_A 293 PLFAVVSRLTS--QKGLDLVLEALPGLLEQGGQLALLGAGDPVL--QEG--F-LAAAAEY-PGQVGVQIGYHEAFSHRIM 364 (485)
T ss_dssp CEEEEEEEESG--GGCHHHHHHHHHHHHHTTCEEEEEEEECHHH--HHH--H-HHHHHHS-TTTEEEEESCCHHHHHHHH
T ss_pred eEEEEeccCcc--ccCHHHHHHHHHHHhhCCcEEEEEeCCchHH--HHH--H-HHHHHhC-CCcEEEeCCCCHHHHHHHH
Confidence 35556676543 223334444444 3366666554432110 000 1 1122222 36785 7788433 3578
Q ss_pred ccCCccccccc---cC-chhHHHHHHhCCcEeccCCcccchhhHHHHHHHH---------cceeEecccccccccccccc
Q 044823 357 SHPAVGGFLTH---CG-WNSSLEGISAGVQMLTWPLFTDQFCNEKLIVEVL---------RIGVSVGVEVPMKFGEEEKI 423 (497)
Q Consensus 357 ~~~~~~~~ItH---gG-~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~---------G~G~~l~~~~~~~~~~~~~~ 423 (497)
+.+++ +|.- -| -.+++||+++|+|+|+... ..+...+ +.- +.|...+..
T Consensus 365 ~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~~~----------- 426 (485)
T 2qzs_A 365 GGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVASGFVFEDS----------- 426 (485)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEECSS-----------
T ss_pred HhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccceEEECCC-----------
Confidence 88888 6622 23 3578899999999999754 3445455 243 578777654
Q ss_pred ccccCHHHHHHHHHHHh---cCChhhHHHHHHH
Q 044823 424 GVLVKKEDVETAINILM---DDGEERDGRRRRA 453 (497)
Q Consensus 424 ~~~~~~~~l~~ai~~vl---~~~~~~~~~~~~a 453 (497)
+.+++.++|.+++ +|++..+.+.+++
T Consensus 427 ----d~~~la~~i~~ll~~~~~~~~~~~~~~~~ 455 (485)
T 2qzs_A 427 ----NAWSLLRAIRRAFVLWSRPSLWRFVQRQA 455 (485)
T ss_dssp ----SHHHHHHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 7899999999999 6764444444444
No 43
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.56 E-value=4.4e-07 Score=79.12 Aligned_cols=140 Identities=12% Similarity=0.124 Sum_probs=91.8
Q ss_pred EEEeeCCcccCCHhhHHHHHHHHHhC-CCCeEEEEeCCCchhhhhhhhchhhHH--HHhcCCCeeeecccch---Hhhhc
Q 044823 284 VYVCLGSICNLTSSQLIELGLGLEAS-KKPFIWVSRVGNKLEELEKWLVEENFE--ERIKGRGLLIRGWAPQ---VMILS 357 (497)
Q Consensus 284 v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~--~~~~~~nv~v~~~~pq---~~lL~ 357 (497)
+++..|+... ...+..++++++.. +.++++.- .........+ -.. .....+|+.+.+|+++ ..++.
T Consensus 25 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G-~~~~~~~l~~-----~~~~~~~~l~~~v~~~g~~~~~e~~~~~~ 96 (177)
T 2f9f_A 25 FWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVG-WFSKGDHAER-----YARKIMKIAPDNVKFLGSVSEEELIDLYS 96 (177)
T ss_dssp CEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEB-CCCTTSTHHH-----HHHHHHHHSCTTEEEEESCCHHHHHHHHH
T ss_pred EEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEe-cCccHHHHHH-----HHHhhhcccCCcEEEeCCCCHHHHHHHHH
Confidence 4556777653 34566777888776 55655554 3322111111 111 1113569999999997 56888
Q ss_pred cCCcccccc---ccCch-hHHHHHHhCCcEeccCCcccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHH
Q 044823 358 HPAVGGFLT---HCGWN-SSLEGISAGVQMLTWPLFTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVE 433 (497)
Q Consensus 358 ~~~~~~~It---HgG~g-s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~ 433 (497)
.+++ +|. +.|+| ++.||+++|+|+|+.. ...+...+ +..+.|..+ .. +.+++.
T Consensus 97 ~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i-~~~~~g~~~-~~---------------d~~~l~ 153 (177)
T 2f9f_A 97 RCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETV-INEKTGYLV-NA---------------DVNEII 153 (177)
T ss_dssp HCSE--EEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHC-CBTTTEEEE-CS---------------CHHHHH
T ss_pred hCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHh-cCCCccEEe-CC---------------CHHHHH
Confidence 8998 665 34554 8999999999999864 35556666 466678877 44 789999
Q ss_pred HHHHHHhcCChh-hHHHHHHHH
Q 044823 434 TAINILMDDGEE-RDGRRRRAK 454 (497)
Q Consensus 434 ~ai~~vl~~~~~-~~~~~~~a~ 454 (497)
++|.++++|++. ++.++++|+
T Consensus 154 ~~i~~l~~~~~~~~~~~~~~a~ 175 (177)
T 2f9f_A 154 DAMKKVSKNPDKFKKDCFRRAK 175 (177)
T ss_dssp HHHHHHHHCTTTTHHHHHHHHH
T ss_pred HHHHHHHhCHHHHHHHHHHHHh
Confidence 999999988854 444444443
No 44
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.56 E-value=1.2e-05 Score=79.88 Aligned_cols=146 Identities=13% Similarity=0.140 Sum_probs=82.6
Q ss_pred EEEEeeCCcccCCHhhHHHHHHHHHh-----CCCCeEEEEeCCCchh-hhhhhhchhhHHHHhc-CCC-------eeeec
Q 044823 283 VVYVCLGSICNLTSSQLIELGLGLEA-----SKKPFIWVSRVGNKLE-ELEKWLVEENFEERIK-GRG-------LLIRG 348 (497)
Q Consensus 283 vv~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~-~~~~~~lp~~~~~~~~-~~n-------v~v~~ 348 (497)
.+++..|.... ...+..+++++.. .+.+++++-.+..... .+.+. + ..+..+.. .++ +.+.+
T Consensus 185 ~~il~vGr~~~--~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~-~-~~~~~~~~l~~~v~~l~~vv~~~g 260 (413)
T 3oy2_A 185 VLFLNMNRNTA--RKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSI-A-LRELVASGVDNVFTHLNKIMINRT 260 (413)
T ss_dssp EEEECCSCSSG--GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHH-H-HHHHHHHTCSCHHHHHTTEEEECS
T ss_pred eEEEEcCCCch--hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHH-H-HHHHHHcCcccccccccceeeccC
Confidence 57777888543 2333444444443 3567666655442210 00010 1 11112222 233 77779
Q ss_pred ccch---HhhhccCCcccccc----ccCchhHHHHHHhCCcEeccCCcccchhhHHHHHHHHcc----------------
Q 044823 349 WAPQ---VMILSHPAVGGFLT----HCGWNSSLEGISAGVQMLTWPLFTDQFCNEKLIVEVLRI---------------- 405 (497)
Q Consensus 349 ~~pq---~~lL~~~~~~~~It----HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~---------------- 405 (497)
|+|+ ..++..+++ +|. -|.-.++.||+++|+|+|+... ......+ .-|.
T Consensus 261 ~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v--~~~~~~~i~~~~~~~~~~~~ 332 (413)
T 3oy2_A 261 VLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYF--SGDCVYKIKPSAWISVDDRD 332 (413)
T ss_dssp CCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHS--CTTTSEEECCCEEEECTTTC
T ss_pred cCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHH--ccCccccccccccccccccc
Confidence 9985 347888888 663 2233589999999999998543 3444444 2222
Q ss_pred ee--EeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHH
Q 044823 406 GV--SVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEF 456 (497)
Q Consensus 406 G~--~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~ 456 (497)
|. .+.. -+.+++.++| ++++|++..+.+.+++++.
T Consensus 333 G~~gl~~~---------------~d~~~la~~i-~l~~~~~~~~~~~~~a~~~ 369 (413)
T 3oy2_A 333 GIGGIEGI---------------IDVDDLVEAF-TFFKDEKNRKEYGKRVQDF 369 (413)
T ss_dssp SSCCEEEE---------------CCHHHHHHHH-HHTTSHHHHHHHHHHHHHH
T ss_pred CcceeeCC---------------CCHHHHHHHH-HHhcCHHHHHHHHHHHHHH
Confidence 44 4433 3899999999 9999875444555554444
No 45
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.40 E-value=7e-05 Score=73.48 Aligned_cols=98 Identities=10% Similarity=0.089 Sum_probs=73.0
Q ss_pred Ceeeecccch-HhhhccCCcccccc---c--cCchhHHHHHHhCCcEeccCCcccchhhHHHHHHHHcceeEeccccccc
Q 044823 343 GLLIRGWAPQ-VMILSHPAVGGFLT---H--CGWNSSLEGISAGVQMLTWPLFTDQFCNEKLIVEVLRIGVSVGVEVPMK 416 (497)
Q Consensus 343 nv~v~~~~pq-~~lL~~~~~~~~It---H--gG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~G~~l~~~~~~~ 416 (497)
++++.++..+ ..+++.+++ ++. . +|..+++||+++|+|+|+-|..++.++....+. +.|.++.. .
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~-~~G~l~~~--~---- 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLE-KEGAGFEV--K---- 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHH-HTTCEEEC--C----
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHH-HCCCEEEe--C----
Confidence 5666665544 558888887 554 1 234789999999999998777777777666653 56766554 3
Q ss_pred cccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHH
Q 044823 417 FGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFGELAK 461 (497)
Q Consensus 417 ~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~ 461 (497)
+.+++.++|.++++| +..+.+.+++++..+.-.
T Consensus 332 -----------d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 332 -----------NETELVTKLTELLSV-KKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp -----------SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHH
T ss_pred -----------CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhcc
Confidence 678999999999998 888889999988776644
No 46
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.36 E-value=0.00036 Score=72.35 Aligned_cols=97 Identities=15% Similarity=0.096 Sum_probs=67.1
Q ss_pred CCeeeecccch---HhhhccCCccccc--c-ccCchhHHHHHHhCCcEeccCCcccchh-hHHHHHHHHcceeEeccccc
Q 044823 342 RGLLIRGWAPQ---VMILSHPAVGGFL--T-HCGWNSSLEGISAGVQMLTWPLFTDQFC-NEKLIVEVLRIGVSVGVEVP 414 (497)
Q Consensus 342 ~nv~v~~~~pq---~~lL~~~~~~~~I--t-HgG~gs~~eal~~GvP~l~~P~~~DQ~~-na~~~~e~~G~G~~l~~~~~ 414 (497)
++|++.+++|+ ..++..+++ || + .|+-+++.||+++|+|+|++|-..=... -+..+ +..|+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhhc----
Confidence 78999999984 356888888 65 2 3555788999999999999875321111 23455 3666654432
Q ss_pred cccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHH
Q 044823 415 MKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFG 457 (497)
Q Consensus 415 ~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~ 457 (497)
-+.+++.+++.++++|++..+.+++++++..
T Consensus 507 ------------~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 537 (568)
T 2vsy_A 507 ------------ADDAAFVAKAVALASDPAALTALHARVDVLR 537 (568)
T ss_dssp ------------SSHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred ------------CCHHHHHHHHHHHhcCHHHHHHHHHHHHHhh
Confidence 2788999999999998855555555555443
No 47
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.13 E-value=0.00035 Score=69.23 Aligned_cols=75 Identities=9% Similarity=-0.015 Sum_probs=58.3
Q ss_pred CCCeeeecccchH---hhhccCCcccccc---ccCc-hhHHHHH-------HhCCcEeccCCcccchhhHHHHHHHHcce
Q 044823 341 GRGLLIRGWAPQV---MILSHPAVGGFLT---HCGW-NSSLEGI-------SAGVQMLTWPLFTDQFCNEKLIVEVLRIG 406 (497)
Q Consensus 341 ~~nv~v~~~~pq~---~lL~~~~~~~~It---HgG~-gs~~eal-------~~GvP~l~~P~~~DQ~~na~~~~e~~G~G 406 (497)
.+||.+.+++|+. .+++.+++ +|. +-|+ +++.||+ ++|+|+|+... + +.-..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcce
Confidence 5689999999864 47888888 553 3454 5688999 99999999755 5 355567
Q ss_pred eE-eccccccccccccccccccCHHHHHHHHHHHhcCC
Q 044823 407 VS-VGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDG 443 (497)
Q Consensus 407 ~~-l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 443 (497)
.. +... +.+++.++|.++++|+
T Consensus 331 ~l~v~~~---------------d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 331 RFGYTPG---------------NADSVIAAITQALEAP 353 (406)
T ss_dssp EEEECTT---------------CHHHHHHHHHHHHHCC
T ss_pred EEEeCCC---------------CHHHHHHHHHHHHhCc
Confidence 76 6554 7899999999999987
No 48
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.94 E-value=6.8e-05 Score=64.03 Aligned_cols=145 Identities=14% Similarity=0.164 Sum_probs=86.8
Q ss_pred eEEEEeeCCcccCCHhhHHHHHHHHHhCCC--Ce-EEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchH---hh
Q 044823 282 SVVYVCLGSICNLTSSQLIELGLGLEASKK--PF-IWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQV---MI 355 (497)
Q Consensus 282 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~--~~-i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~---~l 355 (497)
+++++..|+... ...+..+++++..... .+ ++..|.+..... +. ....+. ..++.+ +|+|+. .+
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~-----~~-~~~~~~-~~~v~~-g~~~~~~~~~~ 71 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGPDEKK-----IK-LLAQKL-GVKAEF-GFVNSNELLEI 71 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCSTTHHH-----HH-HHHHHH-TCEEEC-CCCCHHHHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCccHHH-----HH-HHHHHc-CCeEEE-eecCHHHHHHH
Confidence 357777888753 3445667777776531 23 223333322111 11 111222 237888 999864 47
Q ss_pred hccCCcccccc---c-cCchhHHHHHHhCC-cEeccCCcccchhhHHHHHHHHcceeEeccccccccccccccccccCHH
Q 044823 356 LSHPAVGGFLT---H-CGWNSSLEGISAGV-QMLTWPLFTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKE 430 (497)
Q Consensus 356 L~~~~~~~~It---H-gG~gs~~eal~~Gv-P~l~~P~~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~ 430 (497)
+..+++ +|. + |.-.++.||+++|+ |+|+....+. ....+ +..+. .+.. -+.+
T Consensus 72 ~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~---~~~~~-~~~~~--~~~~---------------~~~~ 128 (166)
T 3qhp_A 72 LKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSA---TRQFA-LDERS--LFEP---------------NNAK 128 (166)
T ss_dssp HTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCG---GGGGC-SSGGG--EECT---------------TCHH
T ss_pred HHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCc---hhhhc-cCCce--EEcC---------------CCHH
Confidence 888888 664 2 33358999999996 9999432221 12222 12222 3322 4889
Q ss_pred HHHHHHHHHhcCChhhHHHHHHHHHHHHH
Q 044823 431 DVETAINILMDDGEERDGRRRRAKEFGEL 459 (497)
Q Consensus 431 ~l~~ai~~vl~~~~~~~~~~~~a~~~~~~ 459 (497)
++.++|.++++|++..+.+.+++++..+.
T Consensus 129 ~l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 157 (166)
T 3qhp_A 129 DLSAKIDWWLENKLERERMQNEYAKSALN 157 (166)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 99999999999987777788887776544
No 49
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.79 E-value=0.00024 Score=72.75 Aligned_cols=153 Identities=15% Similarity=0.049 Sum_probs=95.6
Q ss_pred eEEEEeeCCcccCCHhhHHHHHHHHHhCCCCeEEEE--eCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHh---hh
Q 044823 282 SVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVS--RVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVM---IL 356 (497)
Q Consensus 282 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~--~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~---lL 356 (497)
.++|.+|+......++.+....+-+++.+..++|.. +..... ... +-..+...--.+.+.+.+.+|+.+ .+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~--~~~--~~~~~~~~GI~~Rv~F~g~~p~~e~la~y 516 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGI--THP--YVERFIKSYLGDSATAHPHSPYHQYLRIL 516 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGG--GHH--HHHHHHHHHHGGGEEEECCCCHHHHHHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchh--hHH--HHHHHHHcCCCccEEEcCCCCHHHHHHHH
Confidence 589999999888889999988888888888888753 322111 001 111122111135788889988755 44
Q ss_pred ccCCccccc---cccCchhHHHHHHhCCcEeccCCcccc-hhhHHHHHHHHcceeEeccccccccccccccccccCHHHH
Q 044823 357 SHPAVGGFL---THCGWNSSLEGISAGVQMLTWPLFTDQ-FCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDV 432 (497)
Q Consensus 357 ~~~~~~~~I---tHgG~gs~~eal~~GvP~l~~P~~~DQ-~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l 432 (497)
..+++ |+ ..+|..|++|||++|||+|+.+-..=. ..-+..+ +..|+...+-. -+.++.
T Consensus 517 ~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL-~~~GLpE~LIA---------------~d~eeY 578 (631)
T 3q3e_A 517 HNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLF-KRLGLPEWLIA---------------NTVDEY 578 (631)
T ss_dssp HTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHH-HHTTCCGGGEE---------------SSHHHH
T ss_pred hcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHH-HhcCCCcceec---------------CCHHHH
Confidence 67777 43 347789999999999999998743211 1112233 24555432111 367777
Q ss_pred HHHHHHHhcCChhhHHHHHHHHHH
Q 044823 433 ETAINILMDDGEERDGRRRRAKEF 456 (497)
Q Consensus 433 ~~ai~~vl~~~~~~~~~~~~a~~~ 456 (497)
.+...++.+|++....+|+++++-
T Consensus 579 v~~Av~La~D~~~l~~LR~~Lr~~ 602 (631)
T 3q3e_A 579 VERAVRLAENHQERLELRRYIIEN 602 (631)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHS
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHH
Confidence 777778888885555555554433
No 50
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.64 E-value=0.00072 Score=72.02 Aligned_cols=191 Identities=15% Similarity=0.139 Sum_probs=113.1
Q ss_pred CCeEEEEeeCCcccCCHhhHHHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHH-HhcCCCeeeecccchHhh---
Q 044823 280 PSSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEE-RIKGRGLLIRGWAPQVMI--- 355 (497)
Q Consensus 280 ~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~-~~~~~nv~v~~~~pq~~l--- 355 (497)
++.+||+||......+++.+..-.+-|++.+..++|....+.... .. +-..+.. .+..+.+++.+..|..+.
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~--~~--l~~~~~~~gi~~~r~~f~~~~~~~~~l~~ 596 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE--PN--IQQYAQNMGLPQNRIIFSPVAPKEEHVRR 596 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGH--HH--HHHHHHHTTCCGGGEEEEECCCHHHHHHH
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHH--HH--HHHHHHhcCCCcCeEEECCCCCHHHHHHH
Confidence 345999999999999999999999999999999999987654321 11 2222222 134567888888886554
Q ss_pred hccCCcccccc---ccCchhHHHHHHhCCcEeccCCcc-cchhhHHHHHHHHcceeEeccccccccccccccccccCHHH
Q 044823 356 LSHPAVGGFLT---HCGWNSSLEGISAGVQMLTWPLFT-DQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKED 431 (497)
Q Consensus 356 L~~~~~~~~It---HgG~gs~~eal~~GvP~l~~P~~~-DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~ 431 (497)
+...++ ++. .+|.+|++|||++|||+|.++--. =...-+..+ +..|+...+- -+.++
T Consensus 597 ~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l-~~~gl~e~ia----------------~~~~~ 657 (723)
T 4gyw_A 597 GQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQL-TCLGCLELIA----------------KNRQE 657 (723)
T ss_dssp GGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHH-HHHTCGGGBC----------------SSHHH
T ss_pred hCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHH-HHcCCccccc----------------CCHHH
Confidence 445665 654 889999999999999999999321 122234455 4677665442 34555
Q ss_pred HHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHh-hCCChHHHHHHHHHHH--hhccCccCCcccccC
Q 044823 432 VETAINILMDDGEERDGRRRRAKEFGELAKRALE-EGGSSYNNIKFFHPRY--HATADLRSDVNVVPL 496 (497)
Q Consensus 432 l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~~~~-~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 496 (497)
-.+..-++-+|++....+|++.+ +.+..+.- +.-.-.+++++..+.| ..-+.+.+|--+||+
T Consensus 658 Y~~~a~~la~d~~~l~~lr~~l~---~~~~~s~l~d~~~~~~~le~a~~~~w~r~~~G~~p~~~~~~~ 722 (723)
T 4gyw_A 658 YEDIAVKLGTDLEYLKKVRGKVW---KQRISSPLFNTKQYTMELERLYLQMWEHYAAGNKPDHMIKPV 722 (723)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHH---HHHHHSSTTCHHHHHHHHHHHHHHHHHHHHTTCCCCCBCC--
T ss_pred HHHHHHHHhcCHHHHHHHHHHHH---HHHHhCcCcCHHHHHHHHHHHHHHHHHHHHcCCCCCcccccC
Confidence 43333356667644444443332 22222100 1111223444444444 334555666555553
No 51
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.62 E-value=0.0012 Score=58.05 Aligned_cols=93 Identities=11% Similarity=0.066 Sum_probs=67.5
Q ss_pred Ceee-ecccch---HhhhccCCccccccc---cC-chhHHHHHHhCCcEeccCCcccchhhHHHHHHHHcceeEeccccc
Q 044823 343 GLLI-RGWAPQ---VMILSHPAVGGFLTH---CG-WNSSLEGISAGVQMLTWPLFTDQFCNEKLIVEVLRIGVSVGVEVP 414 (497)
Q Consensus 343 nv~v-~~~~pq---~~lL~~~~~~~~ItH---gG-~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~G~~l~~~~~ 414 (497)
++.+ .+++++ ..++..+++ +|.- .| -.++.||+++|+|+|+... ..+...+ ..+.|...+..
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~--~~~~g~~~~~~-- 165 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII--TNETGILVKAG-- 165 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC--CTTTCEEECTT--
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc--CCCceEEecCC--
Confidence 8999 999984 457888888 6632 23 3588999999999998754 2333322 34567776544
Q ss_pred cccccccccccccCHHHHHHHHHHHhc-CChhhHHHHHHHHHHHH
Q 044823 415 MKFGEEEKIGVLVKKEDVETAINILMD-DGEERDGRRRRAKEFGE 458 (497)
Q Consensus 415 ~~~~~~~~~~~~~~~~~l~~ai~~vl~-~~~~~~~~~~~a~~~~~ 458 (497)
+.+++.++|.++++ |++..+.+.+++++...
T Consensus 166 -------------~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~ 197 (200)
T 2bfw_A 166 -------------DPGELANAILKALELSRSDLSKFRENCKKRAM 197 (200)
T ss_dssp -------------CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred -------------CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 78999999999999 98766677777766544
No 52
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.02 E-value=0.02 Score=55.20 Aligned_cols=106 Identities=13% Similarity=0.032 Sum_probs=70.2
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHHHHHhhhcCCCeE-EEEecCCccccCCCCC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQH--GATATIVTTPVNAARFKTVLARALQCRLQIR-LIEIQFPWQEAGLPEG 81 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~i~~~~~~~~~~~~ 81 (497)
...+||+++-....|++.=.+++.++|+++ +.+|++++.+.+.+.++.. +.++ ++.++. .
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~--------p~vd~vi~~~~---------~ 68 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN--------PNIDELIVVDK---------K 68 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC--------TTCSEEEEECC---------S
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CCccEEEEeCc---------c
Confidence 567899999999999999999999999998 9999999998555444322 3443 444321 0
Q ss_pred CCCCCCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCC-eEEEECCCCcchHHHHHHcCCCeEE
Q 044823 82 CENFDMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQP-CCIISDMCIPWTVDTAAKFNVPRII 144 (497)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-D~vI~D~~~~~a~~~A~~lgIP~i~ 144 (497)
. . ...+ .... .+...++. .++ |++|.=....-...++...|+|...
T Consensus 69 --------~-~-~~~~----~~~~-~l~~~Lr~--~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 --------G-R-HNSI----SGLN-EVAREINA--KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp --------S-H-HHHH----HHHH-HHHHHHHH--HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred --------c-c-cccH----HHHH-HHHHHHhh--CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 0 0 0011 1111 22333444 589 9999655555566788888999765
No 53
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.85 E-value=0.0026 Score=61.06 Aligned_cols=110 Identities=14% Similarity=0.111 Sum_probs=78.8
Q ss_pred CeeeecccchHhh---hccCCccccccccCch---------hHHHHHHhCCcEeccCCcccchhhHHHHHHHHcceeEec
Q 044823 343 GLLIRGWAPQVMI---LSHPAVGGFLTHCGWN---------SSLEGISAGVQMLTWPLFTDQFCNEKLIVEVLRIGVSVG 410 (497)
Q Consensus 343 nv~v~~~~pq~~l---L~~~~~~~~ItHgG~g---------s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~G~~l~ 410 (497)
||.+.+|+|+..+ |+.++..++.+-+.+| -+.|++++|+|+|+.+ ...++..+ ++.|+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEEEeC
Confidence 9999999998664 5455665555333333 4789999999999754 56788888 5999999884
Q ss_pred cccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHH
Q 044823 411 VEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFGELAKRALEEGGSSYNNIKFFHPR 480 (497)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~ 480 (497)
+.+++.+++.++. +++.+.|++||++.++.++. |.-..+.+.+.+.+
T Consensus 290 -----------------~~~e~~~~i~~l~--~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 290 -----------------DVEEAIMKVKNVN--EDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQ 336 (339)
T ss_dssp -----------------SHHHHHHHHHHCC--HHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHH
T ss_pred -----------------CHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHH
Confidence 3467888888764 46788999999999888662 44444444444443
No 54
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.21 E-value=0.081 Score=50.67 Aligned_cols=103 Identities=10% Similarity=-0.005 Sum_probs=64.7
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHHHHHhhhcCCCe-EEEEecCCccccCCCCCCCC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQH--GATATIVTTPVNAARFKTVLARALQCRLQI-RLIEIQFPWQEAGLPEGCEN 84 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~i~~~~~~~~~~~~~~~ 84 (497)
|||+++.....|++.=...+.++|+++ +.+|++++.+.+.+ .++ ..+.+ .++.++. ...
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~----l~~----~~p~i~~v~~~~~-------~~~--- 62 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRP----LLS----RMPEVNEAIPMPL-------GHG--- 62 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHH----HHT----TCTTEEEEEEC---------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhH----HHh----cCCccCEEEEecC-------Ccc---
Confidence 589999999999999999999999997 99999999984443 222 12344 3443221 000
Q ss_pred CCCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCCcchHHHHHHcCCCeEE
Q 044823 85 FDMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCIPWTVDTAAKFNVPRII 144 (497)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~i~ 144 (497)
. .... ....+.+.++. .+||++|.=........++...|+|...
T Consensus 63 ---~---~~~~--------~~~~l~~~l~~--~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 63 ---A---LEIG--------ERRKLGHSLRE--KRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp --------CHH--------HHHHHHHHTTT--TTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred ---c---cchH--------HHHHHHHHHHh--cCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 0 0010 11233445555 6999998322334556778888999744
No 55
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=94.44 E-value=0.081 Score=52.19 Aligned_cols=81 Identities=17% Similarity=0.070 Sum_probs=57.8
Q ss_pred CCCeeeecccchH---hhhccCCcccccc--c-cCc-hhHHHHHHhCCcEeccCCcccchhhHHHHHHHHcceeEecccc
Q 044823 341 GRGLLIRGWAPQV---MILSHPAVGGFLT--H-CGW-NSSLEGISAGVQMLTWPLFTDQFCNEKLIVEVLRIGVSVGVEV 413 (497)
Q Consensus 341 ~~nv~v~~~~pq~---~lL~~~~~~~~It--H-gG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~G~~l~~~~ 413 (497)
.+++.+.+++|+. .+++.+++ ||. . =|. ..++||+++|+|+|+ -..+ ....+ +.-..|+.++..
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv~~~- 364 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSLEQL- 364 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEESSC-
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEeCCC-
Confidence 4588899999864 47888888 664 2 244 467999999999998 3222 12334 344467777654
Q ss_pred ccccccccccccccCHHHHHHHHHHHhcCCh
Q 044823 414 PMKFGEEEKIGVLVKKEDVETAINILMDDGE 444 (497)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 444 (497)
+++++.++|.++++|++
T Consensus 365 --------------d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 365 --------------NPENIAETLVELCMSFN 381 (413)
T ss_dssp --------------SHHHHHHHHHHHHHHTC
T ss_pred --------------CHHHHHHHHHHHHcCHH
Confidence 88999999999998873
No 56
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=94.15 E-value=1.7 Score=40.89 Aligned_cols=42 Identities=12% Similarity=0.069 Sum_probs=37.4
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhC--CCeEEEEeCCcchhh
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQH--GATATIVTTPVNAAR 49 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~r--Gh~Vt~~~~~~~~~~ 49 (497)
|||+++-....|++.=..++.++|+++ +.+|++++.+.+.+.
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l 44 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQI 44 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHH
Confidence 589999999999999999999999998 999999999855443
No 57
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=93.69 E-value=0.61 Score=47.58 Aligned_cols=138 Identities=9% Similarity=0.032 Sum_probs=73.4
Q ss_pred EEEeeCCcccCCHhhHHHHHHHHH---hCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchH---hhhc
Q 044823 284 VYVCLGSICNLTSSQLIELGLGLE---ASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQV---MILS 357 (497)
Q Consensus 284 v~vs~GS~~~~~~~~~~~~~~al~---~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~---~lL~ 357 (497)
+++..|.... ..-+..+++|+. +.+.++++...++.... .. + ... ....+.++.+..+.++. .+++
T Consensus 329 ~i~~vgRl~~--~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~--~~--~-~~~-~~~~~~~v~~~~~~~~~~~~~~~~ 400 (536)
T 3vue_A 329 LIAFIGRLEE--QKGPDVMAAAIPELMQEDVQIVLLGTGKKKFE--KL--L-KSM-EEKYPGKVRAVVKFNAPLAHLIMA 400 (536)
T ss_dssp EEEEECCBSG--GGCHHHHHHHHHHHTTSSCEEEEECCBCHHHH--HH--H-HHH-HHHSTTTEEEECSCCHHHHHHHHH
T ss_pred EEEEEeeccc--cCChHHHHHHHHHhHhhCCeEEEEeccCchHH--HH--H-HHH-HhhcCCceEEEEeccHHHHHHHHH
Confidence 4455676653 233444555554 44666665544332110 00 1 011 11235678777777653 3677
Q ss_pred cCCcccccc---ccCc-hhHHHHHHhCCcEeccCCcccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHH
Q 044823 358 HPAVGGFLT---HCGW-NSSLEGISAGVQMLTWPLFTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVE 433 (497)
Q Consensus 358 ~~~~~~~It---HgG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~ 433 (497)
.+++ ||. +=|+ .+++||+++|+|+|+... ......+ +.-.-|........ .+--....+.++|.
T Consensus 401 ~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V-~dg~~G~~~~~~~~-----~g~l~~~~d~~~la 468 (536)
T 3vue_A 401 GADV--LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTV-IEGKTGFHMGRLSV-----DCKVVEPSDVKKVA 468 (536)
T ss_dssp HCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHC-CBTTTEEECCCCCS-----CTTCCCHHHHHHHH
T ss_pred hhhe--eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchhee-eCCCCccccccCCC-----ceeEECCCCHHHHH
Confidence 8887 664 2244 488999999999998654 3444455 24444543322100 00000123678899
Q ss_pred HHHHHHhc
Q 044823 434 TAINILMD 441 (497)
Q Consensus 434 ~ai~~vl~ 441 (497)
++|+++++
T Consensus 469 ~ai~ral~ 476 (536)
T 3vue_A 469 ATLKRAIK 476 (536)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988774
No 58
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=88.11 E-value=0.24 Score=50.61 Aligned_cols=38 Identities=8% Similarity=0.237 Sum_probs=29.1
Q ss_pred CCCcEEEEecC--------CCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 5 TSNFHFILLPF--------LAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 5 ~~~~~vl~~~~--------p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
...|||+++++ ++.|++ .-.|+++|+++||+|++++|.
T Consensus 7 ~~~MkIl~vs~E~~P~~K~GGLadv--v~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 7 HHHMNVVFVGAEMAPWSKTGGLGDV--LGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp -CCCEEEEECSCBTTTBCSSHHHHH--HHHHHHHHHTTTCEEEEEEEC
T ss_pred CCCcEEEEEEEeccchhccCcHHHH--HHHHHHHHHHcCCeEEEEecC
Confidence 35699999974 333444 557899999999999999864
No 59
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=86.99 E-value=1.6 Score=39.32 Aligned_cols=114 Identities=15% Similarity=0.188 Sum_probs=63.2
Q ss_pred CcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCCCCCC
Q 044823 7 NFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGCENFD 86 (497)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~ 86 (497)
|+|||+..=-+. |---+..|+++|.+.| +|+++.|....+-.-..+. ....+++..+.... .....
T Consensus 1 Mp~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~siT----~~~pl~~~~~~~~~--------~~~v~ 66 (251)
T 2wqk_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLT----FTEPLKMRKIDTDF--------YTVID 66 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCC----CSSCEEEEEEETTE--------EEETT
T ss_pred CCEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCcC----CCCCceeEEeeccc--------eeecC
Confidence 357777766554 4455788999999998 5999988755542211110 11234444432110 00000
Q ss_pred CCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEEC----------CC---CcchHHHHHHcCCCeEEEec
Q 044823 87 MLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISD----------MC---IPWTVDTAAKFNVPRIIFHG 147 (497)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D----------~~---~~~a~~~A~~lgIP~i~~~~ 147 (497)
....+. ..-.+..++.+ .+||+||+- .+ +.+|+.-|..+|||.|.+|.
T Consensus 67 -GTPaDC----------V~lal~~~l~~--~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 67 -GTPADC----------VHLGYRVILEE--KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp -CCHHHH----------HHHHHHTTTTT--CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred -CChHHH----------HhhhhhhhcCC--CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 111011 11133344555 789999983 22 23567778889999999874
No 60
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=85.37 E-value=0.43 Score=46.92 Aligned_cols=41 Identities=12% Similarity=0.090 Sum_probs=32.9
Q ss_pred CCCcEEEEecCCCc-----CCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 044823 5 TSNFHFILLPFLAQ-----GHLIPMFDIARLLAQHGATATIVTTPV 45 (497)
Q Consensus 5 ~~~~~vl~~~~p~~-----GHv~P~l~LA~~L~~rGh~Vt~~~~~~ 45 (497)
.++|||++++.... |=.+....||++|+++||+|++++...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 46799999886532 334568999999999999999999763
No 61
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=84.58 E-value=14 Score=32.31 Aligned_cols=106 Identities=9% Similarity=-0.009 Sum_probs=59.7
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCC--eEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCCCCC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGA--TATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGCENF 85 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh--~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~ 85 (497)
+||+|+.+++.. -+..+.++|.+.+| +|..+.+........+..... ++.+..++ +....
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~-----gIp~~~~~--------~~~~~-- 63 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKH-----NVECKVIQ--------RKEFP-- 63 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHH-----TCCEEECC--------GGGSS--
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHc-----CCCEEEeC--------ccccc--
Confidence 689998777642 46677788888888 766554332222233333222 56666532 11110
Q ss_pred CCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCC-cchHHHHHHcCCCeEEEec
Q 044823 86 DMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCI-PWTVDTAAKFNVPRIIFHG 147 (497)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~a~~~A~~lgIP~i~~~~ 147 (497)
. ...+.+++.+.+++ .++|++|+=.+. .-...+-......++.+++
T Consensus 64 ----~----------r~~~~~~~~~~l~~--~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 110 (216)
T 2ywr_A 64 ----S----------KKEFEERMALELKK--KGVELVVLAGFMRILSHNFLKYFPNKVINIHP 110 (216)
T ss_dssp ----S----------HHHHHHHHHHHHHH--TTCCEEEESSCCSCCCHHHHTTSTTCEEEEES
T ss_pred ----c----------hhhhhHHHHHHHHh--cCCCEEEEeCchhhCCHHHHhhccCCeEEEcC
Confidence 0 11223456677777 899999876653 3444455555566777643
No 62
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=84.45 E-value=1.3 Score=45.92 Aligned_cols=44 Identities=11% Similarity=0.041 Sum_probs=31.2
Q ss_pred eeeecccch---------HhhhccCCcccccc---ccCc-hhHHHHHHhCCcEeccCCc
Q 044823 344 LLIRGWAPQ---------VMILSHPAVGGFLT---HCGW-NSSLEGISAGVQMLTWPLF 389 (497)
Q Consensus 344 v~v~~~~pq---------~~lL~~~~~~~~It---HgG~-gs~~eal~~GvP~l~~P~~ 389 (497)
+.+-.|++. ..+++.+++ ||. +=|+ .+.+||+++|+|+|+.-..
T Consensus 495 If~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 495 IFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp EECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred EEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 334467765 357888888 553 3455 4889999999999986554
No 63
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=83.93 E-value=1.8 Score=34.94 Aligned_cols=50 Identities=8% Similarity=-0.011 Sum_probs=40.6
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHH
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLA 55 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~ 55 (497)
++.+|++.+.+..+|-....-++..|..+|++|.........+.+.+.+.
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~~a~ 51 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKAAI 51 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHHHH
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH
Confidence 46799999999999999999999999999999998866544444544443
No 64
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=83.66 E-value=16 Score=32.34 Aligned_cols=109 Identities=7% Similarity=-0.080 Sum_probs=62.5
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQH--GATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGC 82 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~ 82 (497)
.+++||+|+.+++.. .+..+.++|.+. +++|..+.+........+.... .++.+..++. ...
T Consensus 20 ~~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~-----~gIp~~~~~~--------~~~ 83 (229)
T 3auf_A 20 GHMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARR-----AGVDALHMDP--------AAY 83 (229)
T ss_dssp TTCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHH-----TTCEEEECCG--------GGS
T ss_pred CCCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHH-----cCCCEEEECc--------ccc
Confidence 346799999877742 366777788876 6887665543222223232222 3677765421 111
Q ss_pred CCCCCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCC-cchHHHHHHcCCCeEEEec
Q 044823 83 ENFDMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCI-PWTVDTAAKFNVPRIIFHG 147 (497)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~a~~~A~~lgIP~i~~~~ 147 (497)
. . .+.+.+++.+.+++ .++|+||+=.|. .-...+-......++.+++
T Consensus 84 ~------~----------r~~~~~~~~~~l~~--~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHp 131 (229)
T 3auf_A 84 P------S----------RTAFDAALAERLQA--YGVDLVCLAGYMRLVRGPMLTAFPNRILNIHP 131 (229)
T ss_dssp S------S----------HHHHHHHHHHHHHH--TTCSEEEESSCCSCCCHHHHHHSTTCEEEEES
T ss_pred c------c----------hhhccHHHHHHHHh--cCCCEEEEcChhHhCCHHHHhhccCCEEEEcc
Confidence 0 0 01233456677777 899999877654 4444555666666777543
No 65
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=82.35 E-value=7.8 Score=38.68 Aligned_cols=109 Identities=15% Similarity=0.113 Sum_probs=65.7
Q ss_pred ee-eecccchHh---hhccCCcccccc---ccCch-hHHHHHHhCC-----cEeccCCcccchhhHHHHHHHHcceeEec
Q 044823 344 LL-IRGWAPQVM---ILSHPAVGGFLT---HCGWN-SSLEGISAGV-----QMLTWPLFTDQFCNEKLIVEVLRIGVSVG 410 (497)
Q Consensus 344 v~-v~~~~pq~~---lL~~~~~~~~It---HgG~g-s~~eal~~Gv-----P~l~~P~~~DQ~~na~~~~e~~G~G~~l~ 410 (497)
++ +.+++++.+ ++..+++ ||. .=|+| ++.||+++|+ |+|+--..+ .+. ...-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~----~l~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AAN----ELTSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGG----TCTTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHH----HhCCeEEEC
Confidence 44 457787654 6777887 664 44665 7889999998 666544332 111 112366665
Q ss_pred cccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhhc
Q 044823 411 VEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFGELAKRALEEGGSSYNNIKFFHPRYHAT 484 (497)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 484 (497)
.. +.++++++|.++|+++++ .-+++.++.++.. .+ -+...-++.|+..+...
T Consensus 403 p~---------------d~~~lA~ai~~lL~~~~~--~r~~~~~~~~~~v----~~-~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 PY---------------DRDEVAAALDRALTMSLA--ERISRHAEMLDVI----VK-NDINHWQECFISDLKQI 454 (482)
T ss_dssp TT---------------CHHHHHHHHHHHHTCCHH--HHHHHHHHHHHHH----HH-TCHHHHHHHHHHHHHHS
T ss_pred CC---------------CHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHH----Hh-CCHHHHHHHHHHHHHhc
Confidence 44 789999999999986521 1112222222222 22 35667777888777654
No 66
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=81.97 E-value=3.2 Score=33.52 Aligned_cols=45 Identities=16% Similarity=0.234 Sum_probs=29.9
Q ss_pred CCCCCCCcEEEEecCC-CcCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 044823 1 MASETSNFHFILLPFL-AQGHLIPMFDIARLLAQHGATATIVTTPV 45 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p-~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~ 45 (497)
|.++..++-++++-.| ..-.+.-.+-|+..|.++||+|++++++.
T Consensus 1 ~~~~~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npA 46 (157)
T 1kjn_A 1 MKTESTGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPA 46 (157)
T ss_dssp -----CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHH
T ss_pred CccccceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHH
Confidence 4454333334444555 45666677899999999999999999993
No 67
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=80.01 E-value=19 Score=30.94 Aligned_cols=101 Identities=11% Similarity=0.035 Sum_probs=60.9
Q ss_pred CcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcch--hhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCCCC
Q 044823 7 NFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNA--ARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGCEN 84 (497)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~ 84 (497)
+-.|++++..+-|-..-.+.+|-..+.+|+.|.|+..-... .--...+.. -++.++.... ++..
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~-----L~v~~~~~g~---------gf~~ 93 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEP-----HGVEFQVMAT---------GFTW 93 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGG-----GTCEEEECCT---------TCCC
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHh-----CCcEEEEccc---------cccc
Confidence 45788999999999999999999999999999999654321 000111211 1477776531 2221
Q ss_pred CCCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCC
Q 044823 85 FDMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCI 128 (497)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~ 128 (497)
. . .....-............+.+.+ .++|+||.|-+.
T Consensus 94 ~----~-~~~~~~~~~a~~~l~~a~~~l~~--~~yDlvILDEi~ 130 (196)
T 1g5t_A 94 E----T-QNREADTAACMAVWQHGKRMLAD--PLLDMVVLDELT 130 (196)
T ss_dssp C----G-GGHHHHHHHHHHHHHHHHHHTTC--TTCSEEEEETHH
T ss_pred C----C-CCcHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeCCC
Confidence 1 1 11111112223344455555665 799999999653
No 68
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=78.89 E-value=2.8 Score=34.89 Aligned_cols=51 Identities=12% Similarity=0.099 Sum_probs=41.7
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHH
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLA 55 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~ 55 (497)
..+.+|++.+.++..|-....-++..|..+|++|.........+.+.+.+.
T Consensus 16 ~~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~ 66 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAV 66 (161)
T ss_dssp CCSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHH
T ss_pred CCCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH
Confidence 357899999999999999999999999999999998866544444544443
No 69
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=78.43 E-value=53 Score=32.70 Aligned_cols=109 Identities=15% Similarity=0.049 Sum_probs=67.8
Q ss_pred Ceeeecccch---HhhhccCCcccccc---ccCch-hHHHHHHhC---CcEeccCCcccchhhHHHHHHHHc-ceeEecc
Q 044823 343 GLLIRGWAPQ---VMILSHPAVGGFLT---HCGWN-SSLEGISAG---VQMLTWPLFTDQFCNEKLIVEVLR-IGVSVGV 411 (497)
Q Consensus 343 nv~v~~~~pq---~~lL~~~~~~~~It---HgG~g-s~~eal~~G---vP~l~~P~~~DQ~~na~~~~e~~G-~G~~l~~ 411 (497)
.|++.+.+|+ ..++..+++ ||. .=|+| ...|++++| .|+|+--+.+ .+. .+| -|+.++.
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~----~l~~~allVnP 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAE----VLGEYCRSVNP 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THH----HHGGGSEEECT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHH----HhCCCEEEECC
Confidence 5777777776 346667777 553 46887 458999996 5555433222 222 333 4677765
Q ss_pred ccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhh
Q 044823 412 EVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFGELAKRALEEGGSSYNNIKFFHPRYHA 483 (497)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 483 (497)
. +.++++++|.++|+++++ .-+++.+++.+..+ .-+...=++.|+..|..
T Consensus 423 ~---------------D~~~lA~AI~~aL~m~~~--er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 423 F---------------DLVEQAEAISAALAAGPR--QRAEAAARRRDAAR-----PWTLEAWVQAQLDGLAA 472 (496)
T ss_dssp T---------------BHHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHHH
T ss_pred C---------------CHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHhh
Confidence 4 889999999999987621 11223333333322 34666777788888753
No 70
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=77.28 E-value=3 Score=36.36 Aligned_cols=41 Identities=12% Similarity=0.024 Sum_probs=35.8
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNA 47 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~ 47 (497)
+++||++-.+++.|-+. ...|.+.|.++|++|.++.++...
T Consensus 3 ~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~ 43 (209)
T 3zqu_A 3 GPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQ 43 (209)
T ss_dssp SCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHH
Confidence 45799999999988887 899999999999999999988443
No 71
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=77.25 E-value=34 Score=30.61 Aligned_cols=123 Identities=9% Similarity=0.019 Sum_probs=67.6
Q ss_pred CCcEEEEecCC--CcCCHHHHHHHHHHHHhCCCeEEEEeCC------c--chhhhHHHHHHhhhcCCCeEEEEecCCccc
Q 044823 6 SNFHFILLPFL--AQGHLIPMFDIARLLAQHGATATIVTTP------V--NAARFKTVLARALQCRLQIRLIEIQFPWQE 75 (497)
Q Consensus 6 ~~~~vl~~~~p--~~GHv~P~l~LA~~L~~rGh~Vt~~~~~------~--~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~ 75 (497)
+.|+.+|++.. .-|-..-.+.|++.|+++|++|.++-+- . +...+++. .+.......+.
T Consensus 24 ~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~~~~~~------~g~~~~~~~~~----- 92 (251)
T 3fgn_A 24 SHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRL------AGVTQLAGLAR----- 92 (251)
T ss_dssp SSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHHHHHHH------HCCCEEEEEEE-----
T ss_pred cCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHHHHHHH------cCCCCCCCCee-----
Confidence 34455554443 5889999999999999999999999631 1 11111111 11111111111
Q ss_pred cCCCCCCCCCCCCCchhHHHHHHHHH-HhchHHHHHHHhhcCCCCeEEEECCCC----------cchHHHHHHcCCCeEE
Q 044823 76 AGLPEGCENFDMLPSIDLAYNFLTSL-QKLQLPFENLFREQTPQPCCIISDMCI----------PWTVDTAAKFNVPRII 144 (497)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~D~vI~D~~~----------~~a~~~A~~lgIP~i~ 144 (497)
+... .. .... ...... ....+.+.+.+++...++|++|.|... .....+|+.++.|.+.
T Consensus 93 --~~~p------~s-P~~a-a~~~~~~~~~~~~i~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVIL 162 (251)
T 3fgn_A 93 --YPQP------MA-PAAA-AEHAGMALPARDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALV 162 (251)
T ss_dssp --CSSS------SC-HHHH-HHHTTCCCCCHHHHHHHHHTTCCTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEE
T ss_pred --ECCC------CC-hHHH-HHHcCCCCCCHHHHHHHHHHHHhcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEE
Confidence 1110 00 0111 111111 112345666666655789999998731 2346799999999998
Q ss_pred Eechh
Q 044823 145 FHGFS 149 (497)
Q Consensus 145 ~~~~~ 149 (497)
+....
T Consensus 163 V~~~~ 167 (251)
T 3fgn_A 163 VVTAD 167 (251)
T ss_dssp EECSS
T ss_pred EEcCC
Confidence 76543
No 72
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=76.25 E-value=2.8 Score=36.58 Aligned_cols=43 Identities=7% Similarity=0.029 Sum_probs=35.2
Q ss_pred CCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 044823 4 ETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAA 48 (497)
Q Consensus 4 ~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~ 48 (497)
..+++||++...++.+-+. ...|.+.|.++| +|.++.++....
T Consensus 16 ~l~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~ 58 (209)
T 1mvl_A 16 TPRKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLH 58 (209)
T ss_dssp ---CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGG
T ss_pred ccCCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHH
Confidence 3557899999999988777 899999999999 999999885443
No 73
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=75.30 E-value=37 Score=31.57 Aligned_cols=36 Identities=8% Similarity=-0.059 Sum_probs=24.9
Q ss_pred CCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 4 ETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 4 ~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
+|++|||+|+-.|.+ .+..-++|.++||+|..+.+.
T Consensus 4 m~~~mrivf~Gt~~f-----a~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 4 MSQSLRIVFAGTPDF-----AARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp ---CCEEEEECCSHH-----HHHHHHHHHTSSSEEEEEECC
T ss_pred cccCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEcC
Confidence 356899999987743 345567888899998877654
No 74
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=74.25 E-value=6.2 Score=34.34 Aligned_cols=51 Identities=18% Similarity=0.124 Sum_probs=42.6
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHH
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLAR 56 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~ 56 (497)
.+.+|++.+.++..|-....-++..|..+|++|.++......+.+.+.+..
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~ 137 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKK 137 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHH
Confidence 456899999999999999999999999999999998876555555555443
No 75
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=73.83 E-value=25 Score=29.57 Aligned_cols=103 Identities=10% Similarity=-0.080 Sum_probs=55.8
Q ss_pred hhhhhhhhccCCCCeEEEEeeCCcccCCHhhHHHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeee
Q 044823 268 IPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIR 347 (497)
Q Consensus 268 ~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~ 347 (497)
..++-.+|..+. ...||-|... .......++..+.+-+++-++.... .. .+... -...+++
T Consensus 34 A~~lg~~La~~g---~~lVsGGg~~----Gim~aa~~gAl~~gG~tigVlP~~~-~~------~~~~~-----~~~~i~~ 94 (176)
T 2iz6_A 34 ANELGKQIATHG---WILLTGGRSL----GVMHEAMKGAKEAGGTTIGVLPGPD-TS------EISDA-----VDIPIVT 94 (176)
T ss_dssp HHHHHHHHHHTT---CEEEEECSSS----SHHHHHHHHHHHTTCCEEEEECC------------CCTT-----CSEEEEC
T ss_pred HHHHHHHHHHCC---CEEEECCCcc----CHhHHHHHHHHHcCCEEEEEeCchh-hh------hhccC-----CceeEEc
Confidence 355666776653 4566666522 2334455555556666666654321 10 11100 1123455
Q ss_pred cccch-HhhhccCCccccccccCchhHH---HHHHhCCcEeccCCc
Q 044823 348 GWAPQ-VMILSHPAVGGFLTHCGWNSSL---EGISAGVQMLTWPLF 389 (497)
Q Consensus 348 ~~~pq-~~lL~~~~~~~~ItHgG~gs~~---eal~~GvP~l~~P~~ 389 (497)
++.++ +.++..-+-..++-=||.||+. |++.+++|++++|.+
T Consensus 95 ~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 95 GLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp CCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred CCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 66665 3344333334566678888766 557799999999983
No 76
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=73.32 E-value=45 Score=28.88 Aligned_cols=107 Identities=9% Similarity=-0.002 Sum_probs=60.6
Q ss_pred CcEEEEecCCCcCCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCCCC
Q 044823 7 NFHFILLPFLAQGHLIPMFDIARLLAQH--GATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGCEN 84 (497)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~LA~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~ 84 (497)
++||+++-+++.+ -+..+.++|.+. +|+|..+.+......+.+.... .++.+..++ +..+.
T Consensus 3 m~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~-----~gIp~~~~~--------~~~~~- 65 (212)
T 3av3_A 3 MKRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAAR-----ENVPAFVFS--------PKDYP- 65 (212)
T ss_dssp CEEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHH-----TTCCEEECC--------GGGSS-
T ss_pred CcEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHH-----cCCCEEEeC--------ccccc-
Confidence 3688888777643 356677788877 7898766544222223333222 266666532 11110
Q ss_pred CCCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCC-cchHHHHHHcCCCeEEEec
Q 044823 85 FDMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCI-PWTVDTAAKFNVPRIIFHG 147 (497)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~a~~~A~~lgIP~i~~~~ 147 (497)
. -..+..++.+.+++ .++|++|+=.|. .-...+-......++.+++
T Consensus 66 -----~----------~~~~~~~~~~~l~~--~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 112 (212)
T 3av3_A 66 -----S----------KAAFESEILRELKG--RQIDWIALAGYMRLIGPTLLSAYEGKIVNIHP 112 (212)
T ss_dssp -----S----------HHHHHHHHHHHHHH--TTCCEEEESSCCSCCCHHHHHHTTTCEEEEES
T ss_pred -----c----------hhhhHHHHHHHHHh--cCCCEEEEchhhhhCCHHHHhhhcCCEEEEec
Confidence 0 11223456667777 899999877654 4444555666666777643
No 77
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=72.77 E-value=8.1 Score=34.90 Aligned_cols=51 Identities=14% Similarity=0.016 Sum_probs=41.5
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHH
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLA 55 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~ 55 (497)
..+.+|++.+.++..|-....-++..|..+|++|..+......+.+.+.+.
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~~ 171 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLAAVQ 171 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHHHHH
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH
Confidence 356799999999999999999999999999999998866544444544443
No 78
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=72.41 E-value=22 Score=30.22 Aligned_cols=36 Identities=22% Similarity=0.280 Sum_probs=29.5
Q ss_pred EEEEec--CCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 9 HFILLP--FLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 9 ~vl~~~--~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
|++.+. -++-|-..-...||..|+++|++|.++-..
T Consensus 2 ~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D 39 (206)
T 4dzz_A 2 KVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTD 39 (206)
T ss_dssp EEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 444443 458999999999999999999999999654
No 79
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=70.81 E-value=7 Score=31.28 Aligned_cols=41 Identities=5% Similarity=-0.001 Sum_probs=29.9
Q ss_pred cEEEEe-cCC--CcCCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 044823 8 FHFILL-PFL--AQGHLIPMFDIARLLAQHGATATIVTTPVNAA 48 (497)
Q Consensus 8 ~~vl~~-~~p--~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~ 48 (497)
+|++|+ +.+ ........+.+|...++.||+|+++..-....
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~ 59 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPX 59 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGG
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHH
Confidence 444444 334 46678889999999999999999887765443
No 80
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=70.72 E-value=2.5 Score=36.46 Aligned_cols=45 Identities=7% Similarity=-0.085 Sum_probs=37.1
Q ss_pred CCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 044823 3 SETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAA 48 (497)
Q Consensus 3 ~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~ 48 (497)
++.+++||++...++.|=+. ...|.+.|.++|++|.++.++....
T Consensus 4 ~~l~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~ 48 (194)
T 1p3y_1 4 SILKDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAED 48 (194)
T ss_dssp TTGGGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHH
T ss_pred cccCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHH
Confidence 33556799999999987776 7899999999999999999885443
No 81
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=69.84 E-value=5.3 Score=32.47 Aligned_cols=50 Identities=18% Similarity=0.055 Sum_probs=34.1
Q ss_pred CCCCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 044823 1 MASETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARF 50 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~ 50 (497)
|..++.+.-++++..+..-.+.+.+.+|...++.|++|+++.+-.....+
T Consensus 2 ~~~~m~~kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l 51 (144)
T 2qs7_A 2 MAEEKKKKLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAI 51 (144)
T ss_dssp -----CCEEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHT
T ss_pred ccccccCCEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHH
Confidence 44444444455555567888999999999999999999999876444333
No 82
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=67.11 E-value=5.3 Score=35.23 Aligned_cols=171 Identities=11% Similarity=0.018 Sum_probs=85.5
Q ss_pred hhccCCCCeEEEEeeCCcccCCHhhHHHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchH
Q 044823 274 WLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQV 353 (497)
Q Consensus 274 ~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~ 353 (497)
|++-.. ++++.|+.|.+. ...++.|.+.|..+.+...... +.+.......++......-+.
T Consensus 26 fl~L~g-k~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~~~-----------~~l~~l~~~~~i~~i~~~~~~ 86 (223)
T 3dfz_A 26 MLDLKG-RSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPTVS-----------AEINEWEAKGQLRVKRKKVGE 86 (223)
T ss_dssp EECCTT-CCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSSCC-----------HHHHHHHHTTSCEEECSCCCG
T ss_pred EEEcCC-CEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCCCC-----------HHHHHHHHcCCcEEEECCCCH
Confidence 554443 458888777443 4456677778888877754321 112221123344433222233
Q ss_pred hhhccCCccccccccCchhHHHHHHhCCcEeccCC-cccchhhH-----HHHHHHHcceeEecccccccccccccccccc
Q 044823 354 MILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPL-FTDQFCNE-----KLIVEVLRIGVSVGVEVPMKFGEEEKIGVLV 427 (497)
Q Consensus 354 ~lL~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~-~~DQ~~na-----~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~ 427 (497)
..|..+++ +|.--|--.+.+.++.-.- ..+|+ ..|.|..+ ..+ ++-++-+.+... +..-.
T Consensus 87 ~dL~~adL--VIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv-~rg~l~iaIST~----------G~sP~ 152 (223)
T 3dfz_A 87 EDLLNVFF--IVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQF-SRGRLSLAISTD----------GASPL 152 (223)
T ss_dssp GGSSSCSE--EEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEE-EETTEEEEEECT----------TSCHH
T ss_pred hHhCCCCE--EEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEE-EeCCEEEEEECC----------CCCcH
Confidence 44566666 7777776555555443222 23332 23444332 223 233344444433 01123
Q ss_pred CHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhh
Q 044823 428 KKEDVETAINILMDDGEERDGRRRRAKEFGELAKRALEEGGSSYNNIKFFHPRYHA 483 (497)
Q Consensus 428 ~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 483 (497)
-+..|++.|.+.+ |+....+-+.+.++++.+++. ......=..|.+++..
T Consensus 153 la~~iR~~ie~~l--p~~~~~~~~~~~~~R~~vk~~----~~~~~~Rr~~~~~~~~ 202 (223)
T 3dfz_A 153 LTKRIKEDLSSNY--DESYTQYTQFLYECRVLIHRL----NVSKSRKHELLTEIID 202 (223)
T ss_dssp HHHHHHHHHHHHS--CTHHHHHHHHHHHHHHHHHHC----CSCHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHc--cHHHHHHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHhc
Confidence 4466888888888 445557778888888887754 2222334455555543
No 83
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=66.77 E-value=6 Score=34.10 Aligned_cols=42 Identities=12% Similarity=0.102 Sum_probs=35.1
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhC-CCeEEEEeCCcchhhh
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQH-GATATIVTTPVNAARF 50 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~r-Gh~Vt~~~~~~~~~~~ 50 (497)
|||++-.+++.|-+. ...|.+.|.++ |++|.++.++.....+
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi 43 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTI 43 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHh
Confidence 589999999987766 89999999999 9999999988544433
No 84
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=66.19 E-value=65 Score=27.87 Aligned_cols=106 Identities=8% Similarity=-0.031 Sum_probs=60.4
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCCCCC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQH--GATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGCENF 85 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~ 85 (497)
+||+++.++..+ -+-+|.+++.+. +|+|..+.+........+.... .++.+..++. ....
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~-----~gIp~~~~~~--------~~~~-- 62 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQ-----AGIATHTLIA--------SAFD-- 62 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHH-----TTCEEEECCG--------GGCS--
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHH-----cCCcEEEeCc--------cccc--
Confidence 478888877653 366677777766 6888766544322223333222 3677765420 1110
Q ss_pred CCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCC-cchHHHHHHcCCCeEEEec
Q 044823 86 DMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCI-PWTVDTAAKFNVPRIIFHG 147 (497)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~a~~~A~~lgIP~i~~~~ 147 (497)
. ...+.+++.+.+++ .++|+||+=.|. .-...+-......++.+++
T Consensus 63 ----~----------r~~~~~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 109 (212)
T 1jkx_A 63 ----S----------REAYDRELIHEIDM--YAPDVVVLAGFMRILSPAFVSHYAGRLLNIHP 109 (212)
T ss_dssp ----S----------HHHHHHHHHHHHGG--GCCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred ----c----------hhhccHHHHHHHHh--cCCCEEEEeChhhhCCHHHHhhccCCEEEEcc
Confidence 0 01233456677777 899999977654 3444455566667777643
No 85
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=65.71 E-value=7.8 Score=32.68 Aligned_cols=42 Identities=2% Similarity=-0.077 Sum_probs=35.5
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARF 50 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~ 50 (497)
+||++...++.|=+. ...|.+.|.++|++|.++.++.....+
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi 47 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFI 47 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGS
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHh
Confidence 689999999877665 889999999999999999988655444
No 86
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=65.61 E-value=14 Score=32.35 Aligned_cols=52 Identities=13% Similarity=-0.041 Sum_probs=42.0
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHH
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLAR 56 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~ 56 (497)
.++.+|++.+.++..|-....-++..|..+|++|.......-.+.+.+.+..
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~ 141 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAAK 141 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHHHH
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHH
Confidence 3468999999999999999999999999999999999776555555444433
No 87
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=64.64 E-value=7.7 Score=33.56 Aligned_cols=41 Identities=15% Similarity=-0.025 Sum_probs=34.0
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPV 45 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~ 45 (497)
.+++||++-.+++.|=+.=.+.|.+.|.++|++|+++.++.
T Consensus 5 l~~k~I~lgiTGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~ 45 (201)
T 3lqk_A 5 FAGKHVGFGLTGSHCTYHEVLPQMERLVELGAKVTPFVTHT 45 (201)
T ss_dssp CTTCEEEEECCSCGGGGGGTHHHHHHHHHTTCEEEEECSSC
T ss_pred cCCCEEEEEEEChHHHHHHHHHHHHHHhhCCCEEEEEEChh
Confidence 45679999999984433278999999999999999998873
No 88
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=64.49 E-value=66 Score=30.03 Aligned_cols=106 Identities=9% Similarity=0.050 Sum_probs=57.4
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC-Ccc---hhhhHHHHHHhhhcCCCeEEEEecCCccccCCCC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT-PVN---AARFKTVLARALQCRLQIRLIEIQFPWQEAGLPE 80 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~-~~~---~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~ 80 (497)
+.+|||+|+. --+-...+.++|.++||+|..+.+ +.. ...+....... ++.+....
T Consensus 20 ~~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~-----gIpv~~~~---------- 79 (329)
T 2bw0_A 20 FQSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKD-----GVPVFKYS---------- 79 (329)
T ss_dssp -CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHH-----TCCEEECS----------
T ss_pred CCCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHc-----CCCEEecC----------
Confidence 3458999993 223344567899999999876654 321 12233332222 56655431
Q ss_pred CCCCCCCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCC-cchHHHHHHcCCCeEEEech
Q 044823 81 GCENFDMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCI-PWTVDTAAKFNVPRIIFHGF 148 (497)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~a~~~A~~lgIP~i~~~~~ 148 (497)
..... .....++.+.+++ .++|++|+=.|. .-...+-......++.++++
T Consensus 80 ~~~~~----------------~~~~~~~~~~l~~--~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpS 130 (329)
T 2bw0_A 80 RWRAK----------------GQALPDVVAKYQA--LGAELNVLPFCSQFIPMEIISAPRHGSIIYHPS 130 (329)
T ss_dssp CCEET----------------TEECHHHHHHHHT--TCCSEEEESSCSSCCCHHHHTCSTTCEEEEESS
T ss_pred ccccc----------------ccccHHHHHHHHh--cCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCC
Confidence 11000 0112344555676 799999877654 33344445555567776654
No 89
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=64.03 E-value=49 Score=30.67 Aligned_cols=100 Identities=13% Similarity=0.030 Sum_probs=56.3
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcch----------hhhHHHHHHhhhcCCCeEEEEecCCccc
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNA----------ARFKTVLARALQCRLQIRLIEIQFPWQE 75 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~----------~~~~~~~~~~~~~~~~i~~~~i~~~~~~ 75 (497)
++|||+|+-.+.++ ....++|.+.||+|..+.+.... ..+++.... .++.++.
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~~~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~-----~gIpv~~------- 64 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEE-----KGLPVFQ------- 64 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHH-----TTCCEEC-------
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEeCCCCccccccccCcCHHHHHHHH-----cCCcEEe-------
Confidence 46899999886533 44557777789999866554222 123333222 2444432
Q ss_pred cCCCCCCCCCCCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCC-cchHHHHHHcCCCeEEEech
Q 044823 76 AGLPEGCENFDMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCI-PWTVDTAAKFNVPRIIFHGF 148 (497)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~a~~~A~~lgIP~i~~~~~ 148 (497)
+... . ..++.+.+++ .++|++|+=.|. .-...+-......++.++++
T Consensus 65 ---~~~~------~---------------~~~~~~~l~~--~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 112 (314)
T 1fmt_A 65 ---PVSL------R---------------PQENQQLVAE--LQADVMVVVAYGLILPKAVLEMPRLGCINVHGS 112 (314)
T ss_dssp ---CSCS------C---------------SHHHHHHHHH--TTCSEEEEESCCSCCCHHHHHSSTTCEEEEESS
T ss_pred ---cCCC------C---------------CHHHHHHHHh--cCCCEEEEeeccccCCHHHHhhccCCEEEEcCC
Confidence 1110 0 1244456677 799999876553 33444445556667777655
No 90
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=62.30 E-value=45 Score=29.00 Aligned_cols=105 Identities=10% Similarity=0.003 Sum_probs=57.9
Q ss_pred CCCCCcEEEEecCCCcCCHHHHHHHHHHHHhC--CCeEEEEeCC-cchhhhHHHHHHhhhcCCCeEEEEecCCccccCCC
Q 044823 3 SETSNFHFILLPFLAQGHLIPMFDIARLLAQH--GATATIVTTP-VNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLP 79 (497)
Q Consensus 3 ~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r--Gh~Vt~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~ 79 (497)
++.+++||+++.+++-+- +.+|.+++.+. +++|..+.+. .... ..+.... .++.+..++.
T Consensus 4 ~~~~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~-~l~~A~~-----~gIp~~~~~~-------- 66 (215)
T 3kcq_A 4 SMKKELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEAR-GLLIAQS-----YGIPTFVVKR-------- 66 (215)
T ss_dssp ---CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCT-HHHHHHH-----TTCCEEECCB--------
T ss_pred CCCCCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchH-HHHHHHH-----cCCCEEEeCc--------
Confidence 345678999988877433 44555666554 3687766553 2222 1122221 2677665421
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCC-cchHHHHHHcCCCeEEEec
Q 044823 80 EGCENFDMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCI-PWTVDTAAKFNVPRIIFHG 147 (497)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~a~~~A~~lgIP~i~~~~ 147 (497)
... . + +++.+.+++ .++|+||+-.|. .-...+-....-.++-+++
T Consensus 67 ~~~------~--~-------------~~~~~~L~~--~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHp 112 (215)
T 3kcq_A 67 KPL------D--I-------------EHISTVLRE--HDVDLVCLAGFMSILPEKFVTDWHHKIINIHP 112 (215)
T ss_dssp TTB------C--H-------------HHHHHHHHH--TTCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred ccC------C--h-------------HHHHHHHHH--hCCCEEEEeCCceEeCHHHHhhccCCeEEECc
Confidence 110 0 1 456677777 899999977654 4444555556666777543
No 91
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=61.28 E-value=12 Score=32.02 Aligned_cols=40 Identities=13% Similarity=0.068 Sum_probs=34.0
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAA 48 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~ 48 (497)
+||++..+++.|-+ =...|.+.|.++|++|.++.++....
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~ 41 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKV 41 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHH
Confidence 58999999998855 57899999999999999999884443
No 92
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=60.70 E-value=9 Score=33.25 Aligned_cols=40 Identities=10% Similarity=-0.123 Sum_probs=32.9
Q ss_pred CCCcEEEEecCCCcCCHHH-HHHHHHHHHhCCCeEEEEeCCc
Q 044823 5 TSNFHFILLPFLAQGHLIP-MFDIARLLAQHGATATIVTTPV 45 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P-~l~LA~~L~~rGh~Vt~~~~~~ 45 (497)
.+++||++-.+++ +...- .+.|.+.|.++|++|.++.++.
T Consensus 3 l~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~ 43 (207)
T 3mcu_A 3 LKGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYT 43 (207)
T ss_dssp CTTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC-
T ss_pred CCCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehH
Confidence 4567999988887 44554 7899999999999999999884
No 93
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=59.23 E-value=33 Score=32.87 Aligned_cols=35 Identities=14% Similarity=0.132 Sum_probs=28.1
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
++++||+++..+.. .+.+++++++.|++|.++..+
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECS
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCC
Confidence 57789999987764 366899999999999999764
No 94
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=57.79 E-value=9 Score=33.25 Aligned_cols=42 Identities=19% Similarity=0.154 Sum_probs=33.6
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHh-CCCeEEEEeCCcch
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQ-HGATATIVTTPVNA 47 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~-rGh~Vt~~~~~~~~ 47 (497)
.+++||++...++.+=+. ...|.+.|.+ +|++|.++.++...
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~ 59 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAK 59 (206)
T ss_dssp CSSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGG
T ss_pred cCCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHH
Confidence 456899999999987555 5999999999 89999999988544
No 95
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=57.72 E-value=71 Score=27.73 Aligned_cols=108 Identities=13% Similarity=0.068 Sum_probs=59.2
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHh-CCCeEEEEeCC-cchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQ-HGATATIVTTP-VNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGC 82 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~-rGh~Vt~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~ 82 (497)
.+++||+++.++.-+.+.. |.++..+ .+++|..+.+. .... ..+..+. .++.+..++. ..+
T Consensus 3 ~~~~riavl~SG~Gsnl~a---ll~~~~~~~~~eI~~Vis~~~~a~-~~~~A~~-----~gIp~~~~~~--------~~~ 65 (215)
T 3tqr_A 3 REPLPIVVLISGNGTNLQA---IIGAIQKGLAIEIRAVISNRADAY-GLKRAQQ-----ADIPTHIIPH--------EEF 65 (215)
T ss_dssp -CCEEEEEEESSCCHHHHH---HHHHHHTTCSEEEEEEEESCTTCH-HHHHHHH-----TTCCEEECCG--------GGS
T ss_pred CCCcEEEEEEeCCcHHHHH---HHHHHHcCCCCEEEEEEeCCcchH-HHHHHHH-----cCCCEEEeCc--------ccc
Confidence 3578999998887544444 4444443 36888876553 2222 1222222 3677765431 110
Q ss_pred CCCCCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCC-cchHHHHHHcCCCeEEEec
Q 044823 83 ENFDMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCI-PWTVDTAAKFNVPRIIFHG 147 (497)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~a~~~A~~lgIP~i~~~~ 147 (497)
+. -.....++.+.+++ .++|+||+-.|. .-...+-....-.++-+++
T Consensus 66 ------~~----------r~~~d~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 113 (215)
T 3tqr_A 66 ------PS----------RTDFESTLQKTIDH--YDPKLIVLAGFMRKLGKAFVSHYSGRMINIHP 113 (215)
T ss_dssp ------SS----------HHHHHHHHHHHHHT--TCCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred ------Cc----------hhHhHHHHHHHHHh--cCCCEEEEccchhhCCHHHHhhccCCeEEeCc
Confidence 00 01123466777888 899999977654 4444555566666777643
No 96
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=56.67 E-value=7.4 Score=31.67 Aligned_cols=34 Identities=24% Similarity=0.330 Sum_probs=26.7
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
.+.||+++-. |++- ..+++.|.++||+|+++...
T Consensus 2 ~~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 4568888843 5554 68899999999999999763
No 97
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=56.61 E-value=12 Score=33.68 Aligned_cols=42 Identities=17% Similarity=0.089 Sum_probs=32.9
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAA 48 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~ 48 (497)
+++||||+..=-+. |---+..|+++|.+ +|+|+++.|....+
T Consensus 9 ~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~S 50 (261)
T 3ty2_A 9 TPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRS 50 (261)
T ss_dssp --CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCT
T ss_pred CCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCc
Confidence 46699999887776 55668889999987 89999999986554
No 98
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=56.14 E-value=41 Score=29.26 Aligned_cols=107 Identities=10% Similarity=0.090 Sum_probs=57.0
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHh-CCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCCC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQ-HGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGCE 83 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~-rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~ 83 (497)
..++||+++.+++-+.+.. |.+++.+ .+++|..+.+..... ..+..+. .++.+..++. ..+
T Consensus 10 ~~~~ri~vl~SG~gsnl~a---ll~~~~~~~~~eI~~Vis~~~a~-~~~~A~~-----~gIp~~~~~~--------~~~- 71 (215)
T 3da8_A 10 SAPARLVVLASGTGSLLRS---LLDAAVGDYPARVVAVGVDRECR-AAEIAAE-----ASVPVFTVRL--------ADH- 71 (215)
T ss_dssp CSSEEEEEEESSCCHHHHH---HHHHSSTTCSEEEEEEEESSCCH-HHHHHHH-----TTCCEEECCG--------GGS-
T ss_pred CCCcEEEEEEeCChHHHHH---HHHHHhccCCCeEEEEEeCCchH-HHHHHHH-----cCCCEEEeCc--------ccc-
Confidence 4578999998887544444 3444433 345877665543322 2222222 2677665321 000
Q ss_pred CCCCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCC-cchHHHHHHcCCCeEEEe
Q 044823 84 NFDMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCI-PWTVDTAAKFNVPRIIFH 146 (497)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~a~~~A~~lgIP~i~~~ 146 (497)
.. -..+..++.+.+++ .++|++|+=.|. .-...+-....-.++.++
T Consensus 72 -----~~----------r~~~d~~~~~~l~~--~~~Dlivlagy~~iL~~~~l~~~~~~~iNiH 118 (215)
T 3da8_A 72 -----PS----------RDAWDVAITAATAA--HEPDLVVSAGFMRILGPQFLSRFYGRTLNTH 118 (215)
T ss_dssp -----SS----------HHHHHHHHHHHHHT--TCCSEEEEEECCSCCCHHHHHHHTTTEEEEE
T ss_pred -----cc----------hhhhhHHHHHHHHh--hCCCEEEEcCchhhCCHHHHhhccCCeEEeC
Confidence 00 01124466777887 899998865543 334444455555566654
No 99
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=55.87 E-value=84 Score=31.12 Aligned_cols=34 Identities=24% Similarity=0.080 Sum_probs=27.0
Q ss_pred HHHHHHhhcCCCCeEEEECCCCcchHHHHHHcCCCeEEE
Q 044823 107 PFENLFREQTPQPCCIISDMCIPWTVDTAAKFNVPRIIF 145 (497)
Q Consensus 107 ~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~i~~ 145 (497)
++.+.+++ .+||++|... ....+|+++|||++.+
T Consensus 392 el~~~i~~--~~pDL~ig~~---~~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 392 VLLKTVDE--YQADILIAGG---RNMYTALKGRVPFLDI 425 (483)
T ss_dssp HHHHHHHH--TTCSEEECCG---GGHHHHHHTTCCBCCC
T ss_pred HHHHHHHh--cCCCEEEECC---chhHHHHHcCCCEEEe
Confidence 55666777 7999999863 4677899999999864
No 100
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=54.27 E-value=1.3e+02 Score=30.01 Aligned_cols=34 Identities=18% Similarity=0.164 Sum_probs=25.7
Q ss_pred HHHHHHhhcCCCCeEEEECCCCcchHHHHHHc-------CCCeEEE
Q 044823 107 PFENLFREQTPQPCCIISDMCIPWTVDTAAKF-------NVPRIIF 145 (497)
Q Consensus 107 ~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~l-------gIP~i~~ 145 (497)
++++.+++ .+||++|.... +..+|+++ |||++.+
T Consensus 429 ~l~~~i~~--~~pDLlig~s~---~k~~a~~~~~~~~~~giP~iri 469 (523)
T 3u7q_B 429 HLRSLVFT--DKPDFMIGNSY---GKFIQRDTLHKGKEFEVPLIRI 469 (523)
T ss_dssp HHHHHHHH--TCCSEEEECTT---HHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHHh--cCCCEEEECcc---HHHHHHHhhcccccCCCceEEe
Confidence 45566667 79999999854 45577777 9999974
No 101
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=54.20 E-value=21 Score=34.72 Aligned_cols=35 Identities=20% Similarity=0.301 Sum_probs=24.1
Q ss_pred HHHHHHHhhcCCCCeEEEE--CCCCcchHHHHHHcCCCe
Q 044823 106 LPFENLFREQTPQPCCIIS--DMCIPWTVDTAAKFNVPR 142 (497)
Q Consensus 106 ~~l~~~l~~~~~~~D~vI~--D~~~~~a~~~A~~lgIP~ 142 (497)
+.+.++.++ .++|.|++ |.....+..+++.+|+|.
T Consensus 65 ~~~~~~~~~--~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 65 DVVRQTFVE--FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HHHHHHHHH--SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HHHHHhhhh--cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 345566667 79999985 333345567889999994
No 102
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=54.04 E-value=14 Score=29.60 Aligned_cols=44 Identities=11% Similarity=0.140 Sum_probs=26.6
Q ss_pred CCCCCCCcEEEEecCCCcCCHHH--HHHHHHHHHhCCCeEEEEeCCc
Q 044823 1 MASETSNFHFILLPFLAQGHLIP--MFDIARLLAQHGATATIVTTPV 45 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P--~l~LA~~L~~rGh~Vt~~~~~~ 45 (497)
|..+|++. +++++.+-+|+... .+.+|.++++.||+|.++-...
T Consensus 1 ~~~~Mkk~-~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~D 46 (136)
T 2hy5_B 1 MSEVVKKF-MYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDD 46 (136)
T ss_dssp ----CCEE-EEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGG
T ss_pred CccchhEE-EEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhH
Confidence 54444332 33334445665444 5778999999999999987663
No 103
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=53.95 E-value=16 Score=32.17 Aligned_cols=40 Identities=13% Similarity=0.116 Sum_probs=36.0
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPV 45 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~ 45 (497)
.+++|++..-|+.|-..-++.+|..|+++|++|.++....
T Consensus 5 g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 5 GRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred ceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4688999999999999999999999999999998886643
No 104
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=53.41 E-value=87 Score=29.24 Aligned_cols=41 Identities=15% Similarity=0.162 Sum_probs=33.4
Q ss_pred CCcEEEEec-CCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 044823 6 SNFHFILLP-FLAQGHLIPMFDIARLLAQHGATATIVTTPVN 46 (497)
Q Consensus 6 ~~~~vl~~~-~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~ 46 (497)
++++|+|++ -++.|-..-..+||..|+++|++|.++.....
T Consensus 14 ~~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~ 55 (334)
T 3iqw_A 14 RSLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPA 55 (334)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSS
T ss_pred CCeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 345566554 45899999999999999999999999987643
No 105
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=53.32 E-value=6.9 Score=36.27 Aligned_cols=38 Identities=18% Similarity=0.186 Sum_probs=27.1
Q ss_pred CCCCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 1 MASETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
|+.+..++||.|+-.+..|. .+|+.|+++||+|+++..
T Consensus 1 M~~~~~~~~I~iIG~G~mG~-----~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGLGSMGM-----GAARSCLRAGLSTWGADL 38 (303)
T ss_dssp ------CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCCCCCCeEEEECCCHHHH-----HHHHHHHHCCCeEEEEEC
Confidence 66666678999998777774 689999999999998843
No 106
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=52.74 E-value=64 Score=28.54 Aligned_cols=20 Identities=10% Similarity=0.150 Sum_probs=15.4
Q ss_pred chHHHHHHHhhcCCCCeEEEEC
Q 044823 104 LQLPFENLFREQTPQPCCIISD 125 (497)
Q Consensus 104 ~~~~l~~~l~~~~~~~D~vI~D 125 (497)
....+.+++++ .+||+|++-
T Consensus 85 ~~~~l~~~ir~--~~PdvV~t~ 104 (242)
T 2ixd_A 85 YIREIVKVIRT--YKPKLVFAP 104 (242)
T ss_dssp HHHHHHHHHHH--HCCSEEEEE
T ss_pred HHHHHHHHHHH--cCCCEEEEC
Confidence 34677778888 799999974
No 107
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=52.67 E-value=1.3e+02 Score=30.10 Aligned_cols=34 Identities=24% Similarity=0.292 Sum_probs=25.9
Q ss_pred HHHHHHhhcCCCCeEEEECCCCcchHHHHHHc-------CCCeEEE
Q 044823 107 PFENLFREQTPQPCCIISDMCIPWTVDTAAKF-------NVPRIIF 145 (497)
Q Consensus 107 ~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~l-------gIP~i~~ 145 (497)
++++++++ .+||++|.+. .+..+|+++ |||++.+
T Consensus 425 ~l~~~i~~--~~pDLiig~~---~~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 425 HFRSLMFT--RQPDFMIGNS---YGKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HHHHHHHH--HCCSEEEECG---GGHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHhh--cCCCEEEECc---chHHHHHHhhcccccCCCCeEEe
Confidence 44555666 5899999885 357788888 9999874
No 108
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=51.76 E-value=79 Score=27.28 Aligned_cols=108 Identities=10% Similarity=-0.045 Sum_probs=58.7
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhC--CCeEEEEeCC-cchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQH--GATATIVTTP-VNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEG 81 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r--Gh~Vt~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~ 81 (497)
|.++||+++.++.-+. +.+|.+++.+. .++|..+.+. .... ..+..+. .++.+..++. ..
T Consensus 5 m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~-~l~~A~~-----~gIp~~~~~~--------~~ 67 (209)
T 4ds3_A 5 MKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAG-GLAKAEA-----AGIATQVFKR--------KD 67 (209)
T ss_dssp -CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCT-HHHHHHH-----TTCCEEECCG--------GG
T ss_pred CCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccH-HHHHHHH-----cCCCEEEeCc--------cc
Confidence 5678999988877443 45556666554 3687766553 2222 1122221 3677665421 11
Q ss_pred CCCCCCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCC-cchHHHHHHcCCCeEEEec
Q 044823 82 CENFDMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCI-PWTVDTAAKFNVPRIIFHG 147 (497)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~a~~~A~~lgIP~i~~~~ 147 (497)
+ .. -..+.+++.+.+++ .++|++|+=.|. .-...+-....-.++-+++
T Consensus 68 ~------~~----------r~~~d~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 116 (209)
T 4ds3_A 68 F------AS----------KEAHEDAILAALDV--LKPDIICLAGYMRLLSGRFIAPYEGRILNIHP 116 (209)
T ss_dssp S------SS----------HHHHHHHHHHHHHH--HCCSEEEESSCCSCCCHHHHGGGTTCEEEEES
T ss_pred c------CC----------HHHHHHHHHHHHHh--cCCCEEEEeccccCcCHHHHhhccCCeEEECC
Confidence 0 00 01123466677777 799999877654 4444555556556676543
No 109
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=50.99 E-value=13 Score=30.30 Aligned_cols=39 Identities=18% Similarity=0.221 Sum_probs=27.0
Q ss_pred CCCCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 1 MASETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
|....+.++|+++-.+..| ..+|+.|.++|++|+++...
T Consensus 13 ~~~~~~~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp ----CCCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred hhcccCCCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEECC
Confidence 3334567899998654444 55789999999999998654
No 110
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=50.57 E-value=92 Score=28.66 Aligned_cols=98 Identities=10% Similarity=0.021 Sum_probs=53.5
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchh-------hhHHHHHHhhhcCCCeEEEEecCCccccCCCC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAA-------RFKTVLARALQCRLQIRLIEIQFPWQEAGLPE 80 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~ 80 (497)
|||+|+..|.+ .....++|.++||+|..+.+..... .+++..... ++.+... .
T Consensus 1 mrivf~gt~~f-----a~~~L~~L~~~~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~-----gIpv~~~----------~ 60 (305)
T 2bln_A 1 MKTVVFAYHDM-----GCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAER-----GIPVYAP----------D 60 (305)
T ss_dssp CEEEEEECHHH-----HHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHH-----TCCEECC----------S
T ss_pred CEEEEEEcCHH-----HHHHHHHHHHCCCcEEEEEcCCCCCCCCcCccHHHHHHHHc-----CCCEECC----------C
Confidence 57888865432 2445677788899998776543322 133333222 4544421 1
Q ss_pred CCCCCCCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCC-cchHHHHHHcCCCeEEEech
Q 044823 81 GCENFDMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCI-PWTVDTAAKFNVPRIIFHGF 148 (497)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~a~~~A~~lgIP~i~~~~~ 148 (497)
.. . .+++.+.+++ .++|++|+=.+. .-...+-......++.++++
T Consensus 61 ~~------~---------------~~~~~~~l~~--~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 106 (305)
T 2bln_A 61 NV------N---------------HPLWVERIAQ--LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (305)
T ss_dssp CC------C---------------SHHHHHHHHH--TCCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred cC------C---------------cHHHHHHHHh--cCCCEEEEeccccccCHHHHhcCcCCEEEecCC
Confidence 10 0 0134456677 799999876553 33444445555667777665
No 111
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=50.25 E-value=1e+02 Score=28.44 Aligned_cols=33 Identities=12% Similarity=0.044 Sum_probs=25.2
Q ss_pred CcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 7 NFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
+|||+|+-.|.++- ..-++|.++||+|..+.+.
T Consensus 2 ~mrivf~Gtp~fa~-----~~L~~L~~~~~~v~~Vvt~ 34 (314)
T 3tqq_A 2 SLKIVFAGTPQFAV-----PTLRALIDSSHRVLAVYTQ 34 (314)
T ss_dssp CCEEEEEECSGGGH-----HHHHHHHHSSSEEEEEECC
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEeC
Confidence 57999998886653 4457888899998877664
No 112
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=49.77 E-value=37 Score=33.32 Aligned_cols=45 Identities=4% Similarity=0.024 Sum_probs=38.1
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHH
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKT 52 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~ 52 (497)
--+++...|+.|-..-.+.+|...+.+|..|.+++.+.....+..
T Consensus 198 ~liiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms~~ql~~ 242 (444)
T 3bgw_A 198 NFVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKKENIK 242 (444)
T ss_dssp CEEEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSCTTHHHH
T ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCCHHHHHH
Confidence 347788888999999999999999999999999999876655543
No 113
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=49.49 E-value=21 Score=25.06 Aligned_cols=51 Identities=20% Similarity=0.154 Sum_probs=35.8
Q ss_pred HhCCcEeccCCcccchh-hHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhc
Q 044823 378 SAGVQMLTWPLFTDQFC-NEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMD 441 (497)
Q Consensus 378 ~~GvP~l~~P~~~DQ~~-na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~ 441 (497)
-.|+|++++--.+.|.+ |--.- |..+-|+..+... ..+++++.+.+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqn-eakkegvsydvlk------------stdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQN-EAKKEGVSYDVLK------------STDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHH-HHHHHTCEEEEEE------------CCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHH-HHHhcCcchhhhc------------cCCHHHHHHHHHHHHH
Confidence 37889998888887765 33333 4556666666441 5789999999998873
No 114
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=47.53 E-value=13 Score=31.40 Aligned_cols=40 Identities=13% Similarity=0.090 Sum_probs=33.1
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAA 48 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~ 48 (497)
+||++..+++.|=+ =...|.+.|.++|++|.++.++....
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~ 42 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKN 42 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHH
Confidence 47888888887666 57899999999999999999885443
No 115
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=46.65 E-value=11 Score=34.96 Aligned_cols=37 Identities=22% Similarity=0.363 Sum_probs=29.6
Q ss_pred CCCCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEe
Q 044823 1 MASETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVT 42 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~ 42 (497)
|..+...++|.|+-.+..|. .+|+.|+++||+|+++.
T Consensus 3 m~~~~~~~~IgiIG~G~mG~-----~~A~~l~~~G~~V~~~d 39 (306)
T 3l6d_A 3 LSDESFEFDVSVIGLGAMGT-----IMAQVLLKQGKRVAIWN 39 (306)
T ss_dssp CCCCCCSCSEEEECCSHHHH-----HHHHHHHHTTCCEEEEC
T ss_pred CCcccCCCeEEEECCCHHHH-----HHHHHHHHCCCEEEEEe
Confidence 44555678999998777774 68999999999999874
No 116
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=46.63 E-value=28 Score=30.95 Aligned_cols=38 Identities=11% Similarity=0.161 Sum_probs=29.1
Q ss_pred CcEEEEecCCCcCC-----------HHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 7 NFHFILLPFLAQGH-----------LIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 7 ~~~vl~~~~p~~GH-----------v~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
++||+++.....+. ..=++.-...|.++|++|+++++.
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 56899888864332 256777788899999999999975
No 117
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=46.30 E-value=39 Score=34.31 Aligned_cols=51 Identities=12% Similarity=0.017 Sum_probs=43.1
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHH
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLAR 56 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~ 56 (497)
.+.+|++.+.++..|-....-++..|..+|++|..+....-.+.+.+.+..
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~iv~aa~~ 147 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTAKE 147 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHH
Confidence 467999999999999999999999999999999999776655555555443
No 118
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=44.67 E-value=14 Score=34.87 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=26.2
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
|++|||+++-.+..|. .+|..|+++||+|+++..
T Consensus 2 m~~mki~iiG~G~~G~-----~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGH-----AFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp --CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCcCeEEEECCCHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 4468999998777664 478889999999998854
No 119
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=44.40 E-value=1.5e+02 Score=25.41 Aligned_cols=106 Identities=12% Similarity=-0.023 Sum_probs=56.8
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCCCCC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQH--GATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGCENF 85 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~ 85 (497)
+||+++.++.-+.+. +|.+++.+. +++|..+.+........+.... .++.+..++. ...
T Consensus 1 ~riaVl~SG~Gs~L~---aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~-----~gIp~~~~~~--------~~~--- 61 (209)
T 1meo_A 1 ARVAVLISGTGSNLQ---ALIDSTREPNSSAQIDIVISNKAAVAGLDKAER-----AGIPTRVINH--------KLY--- 61 (209)
T ss_dssp CEEEEEESSSCTTHH---HHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHH-----TTCCEEECCG--------GGS---
T ss_pred CeEEEEEECCchHHH---HHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHH-----cCCCEEEECc--------ccc---
Confidence 478888888765444 344555554 7998777554333223222222 2666654321 110
Q ss_pred CCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCC-cchHHHHHHcCCCeEEEec
Q 044823 86 DMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCI-PWTVDTAAKFNVPRIIFHG 147 (497)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~a~~~A~~lgIP~i~~~~ 147 (497)
.. ...+.+.+.+.+++ .++|+||+=.|. .-...+-......++.+++
T Consensus 62 ---~~----------r~~~~~~~~~~l~~--~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 109 (209)
T 1meo_A 62 ---KN----------RVEFDSAIDLVLEE--FSIDIVCLAGFMRILSGPFVQKWNGKMLNIHP 109 (209)
T ss_dssp ---SS----------HHHHHHHHHHHHHH--TTCCEEEEESCCSCCCHHHHHHTTTSEEEEES
T ss_pred ---Cc----------hhhhhHHHHHHHHh--cCCCEEEEcchhhhCCHHHHhhhcCCEEEEcc
Confidence 00 01123456667777 899999866553 3344445555566777643
No 120
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=43.99 E-value=15 Score=32.37 Aligned_cols=36 Identities=8% Similarity=0.023 Sum_probs=32.4
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
|||+|..-++-|=..=...||..|+++|++|.++=.
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~ 36 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDG 36 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEE
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 578898888999999999999999999999999844
No 121
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=43.96 E-value=15 Score=33.51 Aligned_cols=33 Identities=18% Similarity=0.295 Sum_probs=24.2
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
|||++. |+.|-+= -.|++.|.++||+|+.++-.
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 676654 4556554 35789999999999998743
No 122
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=43.88 E-value=12 Score=35.10 Aligned_cols=33 Identities=15% Similarity=0.065 Sum_probs=27.9
Q ss_pred CcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 7 NFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
.|||+++-.++.| ..+|..|+++||+|+++...
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEECh
Confidence 5789999888877 45789999999999999753
No 123
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=43.78 E-value=39 Score=30.10 Aligned_cols=38 Identities=11% Similarity=0.015 Sum_probs=29.7
Q ss_pred CcEEEEecCCCcC-----------CHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 7 NFHFILLPFLAQG-----------HLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 7 ~~~vl~~~~p~~G-----------Hv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
++||+++.....+ ...=++.--..|.++|++|+++++.
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689988877432 2566777888999999999999975
No 124
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=41.26 E-value=17 Score=34.81 Aligned_cols=30 Identities=27% Similarity=0.274 Sum_probs=26.0
Q ss_pred CcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEE
Q 044823 7 NFHFILLPFLAQGHLIPMFDIARLLAQHGATATIV 41 (497)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~ 41 (497)
.|||+|+-.+--| +.+|..|+++|++|+++
T Consensus 1 sm~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 1 SMHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 3789999777666 88999999999999998
No 125
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=41.12 E-value=2e+02 Score=27.83 Aligned_cols=45 Identities=22% Similarity=0.124 Sum_probs=36.6
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHh-CCCeEEEEeCCcchhhhHH
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQ-HGATATIVTTPVNAARFKT 52 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~-rGh~Vt~~~~~~~~~~~~~ 52 (497)
-=+++...|+.|-..-.+.+|...+. .|..|.+++.+.....+..
T Consensus 201 ~l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~~l~~ 246 (444)
T 2q6t_A 201 SLNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAAQLTL 246 (444)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHHHHHH
Confidence 34677788899999999999999987 4999999999876655443
No 126
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=40.81 E-value=82 Score=27.33 Aligned_cols=102 Identities=6% Similarity=-0.112 Sum_probs=56.6
Q ss_pred hhhhhhhccCCCCeEEEEeeCCcccCCHhhHHHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeec
Q 044823 269 PECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRG 348 (497)
Q Consensus 269 ~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~ 348 (497)
.++-.+|..+. ..+|+-|... .......++....+-+++=+..... +|.... ...-.++.+..
T Consensus 31 ~~lg~~LA~~g---~~lV~GGg~~----GlM~aa~~gA~~~GG~~iGv~p~~l---------~~~e~~-~~~~~~~~~~~ 93 (216)
T 1ydh_A 31 IELGNELVKRK---IDLVYGGGSV----GLMGLISRRVYEGGLHVLGIIPKAL---------MPIEIS-GETVGDVRVVA 93 (216)
T ss_dssp HHHHHHHHHTT---CEEEECCCSS----HHHHHHHHHHHHTTCCEEEEEEGGG---------HHHHCC-SSCCSEEEEES
T ss_pred HHHHHHHHHCC---CEEEECCCcc----cHhHHHHHHHHHcCCcEEEEechhc---------Cccccc-cCCCCcccccC
Confidence 45556776553 3555555432 3455566666666767766654321 111000 00012345556
Q ss_pred ccch-Hhhh-ccCCccccccccCchhHHHHH---------HhCCcEeccCC
Q 044823 349 WAPQ-VMIL-SHPAVGGFLTHCGWNSSLEGI---------SAGVQMLTWPL 388 (497)
Q Consensus 349 ~~pq-~~lL-~~~~~~~~ItHgG~gs~~eal---------~~GvP~l~~P~ 388 (497)
.++. ..++ .+++ .+++--||.||+-|.. .+++|++++-.
T Consensus 94 ~~~~Rk~~~~~~sd-a~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 94 DMHERKAAMAQEAE-AFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp SHHHHHHHHHHHCS-EEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred CHHHHHHHHHHhCC-EEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 6654 3333 3444 3577889999988776 57999999874
No 127
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=40.26 E-value=1.5e+02 Score=24.21 Aligned_cols=138 Identities=12% Similarity=0.062 Sum_probs=73.2
Q ss_pred EEEEeeCCcccCCHhhHHHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCCcc
Q 044823 283 VVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPAVG 362 (497)
Q Consensus 283 vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~ 362 (497)
.|-|-+||.. +-...++....|+..+.++-..+-+-+. .|+.+.+ |+.+.. ..-..+
T Consensus 4 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~saHR--------~p~~~~~-----------~~~~a~--~~~~~~ 60 (159)
T 3rg8_A 4 LVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSAHK--------TAEHVVS-----------MLKEYE--ALDRPK 60 (159)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT--------CHHHHHH-----------HHHHHH--TSCSCE
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcccC--------CHHHHHH-----------HHHHhh--hcCCCc
Confidence 3556677665 4566778888888889887666655443 3432211 111111 000123
Q ss_pred ccccccCch----hHHHHHHhCCcEeccCCcccc-hhhH-HHHHHHH--cceeEeccccccccccccccccccCHHHHHH
Q 044823 363 GFLTHCGWN----SSLEGISAGVQMLTWPLFTDQ-FCNE-KLIVEVL--RIGVSVGVEVPMKFGEEEKIGVLVKKEDVET 434 (497)
Q Consensus 363 ~~ItHgG~g----s~~eal~~GvP~l~~P~~~DQ-~~na-~~~~e~~--G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 434 (497)
+||.=.|.. ++.-++ .-+|+|.+|...-. .... .-+. +. |+.+.-- + +-.++.-+..
T Consensus 61 ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dLlS~v-qmp~GvpVatv-~------------~~~nAa~lA~ 125 (159)
T 3rg8_A 61 LYITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGADIYSSL-RMPSGISPALV-L------------EPKNAALLAA 125 (159)
T ss_dssp EEEEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTHHHHHH-CCCTTCCCEEC-C------------SHHHHHHHHH
T ss_pred EEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCccHHHHH-hCCCCCceEEe-c------------CchHHHHHHH
Confidence 377766643 444443 66899999965321 1111 1111 22 4433221 2 1356665655
Q ss_pred HHHHHhcCChhhHHHHHHHHHHHHHHHHH
Q 044823 435 AINILMDDGEERDGRRRRAKEFGELAKRA 463 (497)
Q Consensus 435 ai~~vl~~~~~~~~~~~~a~~~~~~~~~~ 463 (497)
.|.. +.|+ .++++.+.+++.++..
T Consensus 126 ~Il~-~~d~----~l~~kl~~~r~~~~~~ 149 (159)
T 3rg8_A 126 RIFS-LYDK----EIADSVKSYMESNAQK 149 (159)
T ss_dssp HHHT-TTCH----HHHHHHHHHHHHHHHH
T ss_pred HHHh-CCCH----HHHHHHHHHHHHHHHH
Confidence 5544 3556 7778877777776654
No 128
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=40.17 E-value=17 Score=33.95 Aligned_cols=38 Identities=21% Similarity=0.175 Sum_probs=27.1
Q ss_pred CCCCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 1 MASETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
|++ ++.+||.|+-.+..|. .+|..|+++||+|+++-..
T Consensus 1 m~~-~~~~kI~vIGaG~MG~-----~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 1 MAS-PAAGDVLIVGSGLVGR-----SWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp -------CEEEEECCSHHHH-----HHHHHHHHTTCCEEEECSC
T ss_pred CCC-CCCceEEEEeeCHHHH-----HHHHHHHHCCCEEEEEeCC
Confidence 644 5678999998888774 6789999999999998543
No 129
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=40.01 E-value=77 Score=31.11 Aligned_cols=148 Identities=12% Similarity=-0.015 Sum_probs=73.7
Q ss_pred CeEEEEeeCCcccCCHhhHHHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCC
Q 044823 281 SSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPA 360 (497)
Q Consensus 281 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~ 360 (497)
++++.|..|... ...++.|.+.|..+.+.-.... +.+.......++.+..---+...|..++
T Consensus 13 ~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~~~-----------~~~~~l~~~~~i~~~~~~~~~~~l~~~~ 74 (457)
T 1pjq_A 13 RDCLIVGGGDVA-------ERKARLLLEAGARLTVNALTFI-----------PQFTVWANEGMLTLVEGPFDETLLDSCW 74 (457)
T ss_dssp CEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESSCC-----------HHHHHHHTTTSCEEEESSCCGGGGTTCS
T ss_pred CEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCCCC-----------HHHHHHHhcCCEEEEECCCCccccCCcc
Confidence 458888777544 3445666677888776654321 1222211223443321111223344555
Q ss_pred ccccccccCchh-----HHHHHHhCCcE--eccCCcccchhhHHHHH-HHHcceeEeccccccccccccccccccCHHHH
Q 044823 361 VGGFLTHCGWNS-----SLEGISAGVQM--LTWPLFTDQFCNEKLIV-EVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDV 432 (497)
Q Consensus 361 ~~~~ItHgG~gs-----~~eal~~GvP~--l~~P~~~DQ~~na~~~~-e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l 432 (497)
+ +|.--|.-. ..+|-..|+|+ +--|-..|...-| .+. ...-+|+. .+- ....-+..|
T Consensus 75 l--Vi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa-~~~~~~l~iaIs--T~G----------ksp~la~~i 139 (457)
T 1pjq_A 75 L--AIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPS-IIDRSPLMVAVS--SGG----------TSPVLARLL 139 (457)
T ss_dssp E--EEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCE-EEEETTEEEEEE--CTT----------SCHHHHHHH
T ss_pred E--EEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeee-EEEeCCeEEEEE--CCC----------CChHHHHHH
Confidence 5 777666543 34556678886 4444444433211 110 01223444 220 012225678
Q ss_pred HHHHHHHhcCChhhHHHHHHHHHHHHHHHHH
Q 044823 433 ETAINILMDDGEERDGRRRRAKEFGELAKRA 463 (497)
Q Consensus 433 ~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~~ 463 (497)
++.|.+.+. +....+-+.+.++++..++.
T Consensus 140 r~~ie~~l~--~~~~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 140 REKLESLLP--QHLGQVARYAGQLRARVKKQ 168 (457)
T ss_dssp HHHHHHHSC--TTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcc--hhHHHHHHHHHHHHHHHHhh
Confidence 888888884 33346666666666666644
No 130
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=39.67 E-value=31 Score=31.06 Aligned_cols=40 Identities=18% Similarity=0.192 Sum_probs=33.9
Q ss_pred CCCcEEEEecCC---CcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 5 TSNFHFILLPFL---AQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 5 ~~~~~vl~~~~p---~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
+..||.+|++.+ +.|-=.-.-.|+..|.+||+.|+..--.
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~D 62 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKID 62 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecc
Confidence 567899999988 5777788899999999999999998544
No 131
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=39.47 E-value=2.1e+02 Score=27.99 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=27.8
Q ss_pred HHHHHHhhcCCCCeEEEECCCCcchHHHHHHcCCCeEEE
Q 044823 107 PFENLFREQTPQPCCIISDMCIPWTVDTAAKFNVPRIIF 145 (497)
Q Consensus 107 ~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~i~~ 145 (497)
++++++++ .+||++|.+. ....+|+++|||++.+
T Consensus 376 ~l~~~i~~--~~pDl~ig~~---~~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 376 DVHQWIKN--EGVDLLISNT---YGKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHH--SCCSEEEESG---GGHHHHHHHTCCEEEC
T ss_pred HHHHHHHh--cCCCEEEeCc---chHHHHHHcCCCEEEe
Confidence 45677777 7999999885 4677899999999984
No 132
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=38.50 E-value=1.5e+02 Score=25.75 Aligned_cols=20 Identities=15% Similarity=0.351 Sum_probs=15.6
Q ss_pred chHHHHHHHhhcCCCCeEEEEC
Q 044823 104 LQLPFENLFREQTPQPCCIISD 125 (497)
Q Consensus 104 ~~~~l~~~l~~~~~~~D~vI~D 125 (497)
....+.+++++ .+||+|++.
T Consensus 83 ~~~~l~~~ir~--~~P~~V~t~ 102 (227)
T 1uan_A 83 QRLKLAQALRR--LRPRVVFAP 102 (227)
T ss_dssp HHHHHHHHHHH--HCEEEEEEE
T ss_pred HHHHHHHHHHH--hCCCEEEeC
Confidence 35667778888 899999974
No 133
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=38.07 E-value=30 Score=32.30 Aligned_cols=34 Identities=12% Similarity=0.043 Sum_probs=29.0
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
.++||.|+-.+..| |-.+|+.|+++||+|+..=.
T Consensus 3 ~~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 3 AMKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 46799999999877 55799999999999999844
No 134
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=37.93 E-value=46 Score=30.64 Aligned_cols=32 Identities=16% Similarity=0.178 Sum_probs=27.0
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
|||+++-.++.|- .+|..|+++||+|+++...
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcC
Confidence 6899999998884 5689999999999999865
No 135
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=37.75 E-value=46 Score=30.81 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=27.9
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPV 45 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~ 45 (497)
|||+++-.++.|- .+|..|++.||+|+++....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCCh
Confidence 6899998888884 57889999999999998653
No 136
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=37.46 E-value=24 Score=27.55 Aligned_cols=33 Identities=15% Similarity=0.304 Sum_probs=24.5
Q ss_pred CcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 7 NFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
.|||+++-. |.+-- .+|+.|.++||+|+++...
T Consensus 4 ~m~i~IiG~---G~iG~--~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGI---GRVGY--TLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECC---SHHHH--HHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC---CHHHH--HHHHHHHhCCCeEEEEECC
Confidence 478888833 55543 5789999999999998653
No 137
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=37.22 E-value=78 Score=31.32 Aligned_cols=110 Identities=15% Similarity=0.140 Sum_probs=57.9
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCCCCC
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGCENF 85 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~ 85 (497)
.++|-+|++. .+=.-++.+|+.|.+.|.++. ++..+...+++. ++....+. .-.++|+-....
T Consensus 8 ~~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~---------GI~v~~V~---~vTgfPEil~GR 70 (523)
T 3zzm_A 8 RPIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADT---------GIPVTPVE---QLTGFPEVLDGR 70 (523)
T ss_dssp CCCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTT---------TCCCEEHH---HHHSCCCCTTTT
T ss_pred ccccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHc---------CCceeecc---ccCCCchhhCCc
Confidence 3445455555 456678999999999998875 555444444443 56555441 012566655432
Q ss_pred C-CCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCCcchHHHH
Q 044823 86 D-MLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCIPWTVDTA 135 (497)
Q Consensus 86 ~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A 135 (497)
. .+.. .....++.. ......+.++-+.--..+|+||++ ++++-..++
T Consensus 71 VKTLHP-~ihgGiLa~-r~~~~h~~~l~~~~i~~iDlVvvN-LYPF~~tv~ 118 (523)
T 3zzm_A 71 VKTLHP-RVHAGLLAD-LRKSEHAAALEQLGIEAFELVVVN-LYPFSQTVE 118 (523)
T ss_dssp SSSCSH-HHHHHHHCC-TTSHHHHHHHHHHTCCCCSEEEEE-CCCHHHHHH
T ss_pred cccCCc-hhhhhhccC-CCCHHHHHHHHHCCCCceeEEEEe-CCChHHHHh
Confidence 2 2222 222222211 122334444333323689999999 444444443
No 138
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=36.55 E-value=36 Score=30.92 Aligned_cols=38 Identities=13% Similarity=0.135 Sum_probs=30.5
Q ss_pred CcEEEEecC--CCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 7 NFHFILLPF--LAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 7 ~~~vl~~~~--p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
++|++.+.. ++.|-..-...||..|+++|+.|.++=..
T Consensus 3 M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D 42 (286)
T 2xj4_A 3 ETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLD 42 (286)
T ss_dssp -CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECC
Confidence 455655544 58999999999999999999999998544
No 139
>2kw0_A CCMH protein; oxidoreductase, cytochrome C maturation; NMR {Escherichia coli}
Probab=36.29 E-value=73 Score=23.29 Aligned_cols=43 Identities=14% Similarity=0.231 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhhccCccCCcc
Q 044823 450 RRRAKEFGELAKRALEEGGSSYNNIKFFHPRYHATADLRSDVN 492 (497)
Q Consensus 450 ~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 492 (497)
..-|+.|+...++.+.+|.+-...++.|+.++-..=-++++++
T Consensus 39 A~iA~dlR~~Vre~l~~G~Sd~eI~~~mv~RYGdfVly~Pp~~ 81 (90)
T 2kw0_A 39 SMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLT 81 (90)
T ss_dssp CHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHTTTCBCSCCSC
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhcCCeEEeeCCCC
Confidence 3678888888888888898888888899999887777776665
No 140
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=36.09 E-value=26 Score=31.01 Aligned_cols=35 Identities=14% Similarity=0.188 Sum_probs=29.6
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
.++|||.|+-.+..|- .||+.|+++||+|+.+..+
T Consensus 4 ~~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CCCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 3578999999998885 5899999999999987653
No 141
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=35.91 E-value=41 Score=30.27 Aligned_cols=33 Identities=21% Similarity=0.296 Sum_probs=24.8
Q ss_pred CcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 7 NFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
+|+|+++- + |-+- ..|++.|.++||+|+.+.-.
T Consensus 3 ~~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 3 LSKILIAG--C-GDLG--LELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCEEEEC--C-SHHH--HHHHHHHHHTTCCEEEEECT
T ss_pred CCcEEEEC--C-CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 56787773 5 7443 46889999999999998754
No 142
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=35.61 E-value=22 Score=34.69 Aligned_cols=37 Identities=14% Similarity=0.062 Sum_probs=25.8
Q ss_pred CCCCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 1 MASETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
|..+.+.|||.++-.+..|. .+|..|++ ||+|+++-.
T Consensus 30 ~~r~~~~mkIaVIGlG~mG~-----~lA~~La~-G~~V~~~D~ 66 (432)
T 3pid_A 30 MGRGSEFMKITISGTGYVGL-----SNGVLIAQ-NHEVVALDI 66 (432)
T ss_dssp -----CCCEEEEECCSHHHH-----HHHHHHHT-TSEEEEECS
T ss_pred cccccCCCEEEEECcCHHHH-----HHHHHHHc-CCeEEEEec
Confidence 44556778999998877774 56778887 999998854
No 143
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=35.50 E-value=74 Score=24.03 Aligned_cols=38 Identities=11% Similarity=0.149 Sum_probs=28.8
Q ss_pred CCCCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEe
Q 044823 1 MASETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVT 42 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~ 42 (497)
|...++++||+++- .|-.-...|.+.|.+.|++|..+.
T Consensus 1 M~~~~~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~ 38 (130)
T 3eod_A 1 MTQPLVGKQILIVE----DEQVFRSLLDSWFSSLGATTVLAA 38 (130)
T ss_dssp --CTTTTCEEEEEC----SCHHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCCCCCCeEEEEe----CCHHHHHHHHHHHHhCCceEEEeC
Confidence 77778889999985 455667778888999999988754
No 144
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=35.46 E-value=37 Score=32.11 Aligned_cols=96 Identities=14% Similarity=0.171 Sum_probs=49.1
Q ss_pred eEEEEeeCCcccCCHhhHHHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchh-----------hHHHHhcCCCeeee-cc
Q 044823 282 SVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVSRVGNKLEELEKWLVEE-----------NFEERIKGRGLLIR-GW 349 (497)
Q Consensus 282 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~-----------~~~~~~~~~nv~v~-~~ 349 (497)
.+|+.+.||.....+ ..+++++|.+.|.+++|.......+... +|. ++......+++... .+
T Consensus 4 ~i~i~~GGTgGHi~p--alala~~L~~~g~~V~~vg~~~g~e~~~----v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~ 77 (365)
T 3s2u_A 4 NVLIMAGGTGGHVFP--ALACAREFQARGYAVHWLGTPRGIENDL----VPKAGLPLHLIQVSGLRGKGLKSLVKAPLEL 77 (365)
T ss_dssp EEEEECCSSHHHHHH--HHHHHHHHHHTTCEEEEEECSSSTHHHH----TGGGTCCEEECC--------------CHHHH
T ss_pred cEEEEcCCCHHHHHH--HHHHHHHHHhCCCEEEEEECCchHhhch----hhhcCCcEEEEECCCcCCCCHHHHHHHHHHH
Confidence 366666666442211 2467888999999999987654322111 111 11000000011100 00
Q ss_pred ---cch-Hhhhc--cCCccccccccCchhH---HHHHHhCCcEec
Q 044823 350 ---APQ-VMILS--HPAVGGFLTHCGWNSS---LEGISAGVQMLT 385 (497)
Q Consensus 350 ---~pq-~~lL~--~~~~~~~ItHgG~gs~---~eal~~GvP~l~ 385 (497)
+.| ..++. +|++ +|++||.-+. ..|-..|+|.++
T Consensus 78 ~~~~~~~~~~l~~~~PDv--Vi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 78 LKSLFQALRVIRQLRPVC--VLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp HHHHHHHHHHHHHHCCSE--EEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHhcCCCE--EEEcCCcchHHHHHHHHHcCCCEEE
Confidence 011 12333 6777 9999998664 557778999986
No 145
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=35.45 E-value=23 Score=32.92 Aligned_cols=31 Identities=16% Similarity=0.250 Sum_probs=26.0
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEE
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIV 41 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~ 41 (497)
.++||+++-.++.| ..+|..|++.||+|+++
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILI 48 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEE
Confidence 46899999888888 46789999999999999
No 146
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=35.27 E-value=22 Score=28.09 Aligned_cols=34 Identities=15% Similarity=0.257 Sum_probs=25.1
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
+++||+++-. |.+ -..+|+.|.++||+|+++...
T Consensus 5 ~~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 3567888865 443 357899999999999998653
No 147
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=35.07 E-value=40 Score=30.08 Aligned_cols=113 Identities=15% Similarity=0.155 Sum_probs=64.5
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCCCCCCC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGCENFDM 87 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~ 87 (497)
||||+..=-+. |---+..|+++|.+.| +|+++.|....+-.-..+. ....+++..+... .. + ...
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~sit----~~~pl~~~~~~~~-----~~--~-~v~- 66 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLT----FTEPLKMRKIDTD-----FY--T-VID- 66 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCC----CSSCEEEEEEETT-----EE--E-ETT-
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCcccee----cCCCeEEEEecCC-----Ce--E-EEC-
Confidence 78888877665 5566889999999998 9999998865543222110 1123444443211 00 0 000
Q ss_pred CCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECC----------CC---cchHHHHHHcCCCeEEEec
Q 044823 88 LPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDM----------CI---PWTVDTAAKFNVPRIIFHG 147 (497)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~----------~~---~~a~~~A~~lgIP~i~~~~ 147 (497)
... ..... -.+..++.+ .+||+||+-. ++ .+|+.-|..+|||.|.+|.
T Consensus 67 GTP---aDCV~-------lal~~l~~~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 67 GTP---ADCVH-------LGYRVILEE--KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp CCH---HHHHH-------HHHHTTTTT--CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCH---HHHHH-------HHHHHhcCC--CCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 111 11111 123333443 5899999742 21 2456677888999999875
No 148
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=35.02 E-value=77 Score=23.86 Aligned_cols=39 Identities=10% Similarity=0.075 Sum_probs=30.9
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
+++||+++|..+.|--.=.-.+=+.+.++|.++.+-...
T Consensus 2 ~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~ 40 (106)
T 1e2b_A 2 EKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP 40 (106)
T ss_dssp CCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 467899999998776666668888899999998876544
No 149
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=34.93 E-value=38 Score=25.68 Aligned_cols=28 Identities=11% Similarity=0.106 Sum_probs=22.9
Q ss_pred cCCHHHHHHHHHHHHhC-CC-eEEEEeCCc
Q 044823 18 QGHLIPMFDIARLLAQH-GA-TATIVTTPV 45 (497)
Q Consensus 18 ~GHv~P~l~LA~~L~~r-Gh-~Vt~~~~~~ 45 (497)
.......+.+|..+++. || +|+++....
T Consensus 15 ~~~~~~al~~a~~~~~~~g~~~v~vff~~d 44 (117)
T 1jx7_A 15 SESLFNSLRLAIALREQESNLDLRLFLMSD 44 (117)
T ss_dssp CSHHHHHHHHHHHHHHHCTTCEEEEEECGG
T ss_pred cHHHHHHHHHHHHHHhcCCCccEEEEEEch
Confidence 45567789999999999 99 999887663
No 150
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=34.84 E-value=40 Score=31.24 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=27.8
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
+.|+|.|+-.+..| ..+|+.|+++||+|+++..
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 45799999888888 5689999999999998843
No 151
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=34.79 E-value=39 Score=29.54 Aligned_cols=46 Identities=13% Similarity=0.070 Sum_probs=35.5
Q ss_pred EEEEecCCCcCCHHHHHHHHHH-HHhCCCeEEEEeCCcchhhhHHHH
Q 044823 9 HFILLPFLAQGHLIPMFDIARL-LAQHGATATIVTTPVNAARFKTVL 54 (497)
Q Consensus 9 ~vl~~~~p~~GHv~P~l~LA~~-L~~rGh~Vt~~~~~~~~~~~~~~~ 54 (497)
-+++...|+.|-..-.+++|.. +.+.|..|.+++.+.....+...+
T Consensus 32 l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~~~~~ 78 (251)
T 2zts_A 32 TVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDLRREM 78 (251)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHHHHHH
Confidence 4677788899999999998866 455688999999887766554443
No 152
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=34.48 E-value=25 Score=32.27 Aligned_cols=32 Identities=19% Similarity=0.271 Sum_probs=25.9
Q ss_pred CcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 7 NFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
+|||+++-.+..|. .+|..|+++||+|+++..
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMGS-----RLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHhCCCcEEEEEC
Confidence 47899998777774 578999999999999864
No 153
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=33.81 E-value=75 Score=27.32 Aligned_cols=48 Identities=13% Similarity=-0.009 Sum_probs=33.8
Q ss_pred hhhhhhhccCCCCeEEEEeeCCcccCCHhhHHHHHHHHHhCCCCeEEE
Q 044823 269 PECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWV 316 (497)
Q Consensus 269 ~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 316 (497)
+-+.+|+.....+.++||..+|......+.+....++|++.|..+.+.
T Consensus 16 ~~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 16 PLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 334556644444569999988775444567788899999999986654
No 154
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=33.27 E-value=84 Score=29.04 Aligned_cols=72 Identities=13% Similarity=0.079 Sum_probs=39.8
Q ss_pred HHhhcCCceEEeCcCcCCCccchhhhhcCCCCCCChhhhhhhhccCCCCeEEEEeeCCcc---cCCHhhHHHHHHHHHhC
Q 044823 233 YKNAKQGKVWCIGPVSLCNKESLDKVERGNKAAIDIPECLTWLDSQQPSSVVYVCLGSIC---NLTSSQLIELGLGLEAS 309 (497)
Q Consensus 233 ~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~---~~~~~~~~~~~~al~~~ 309 (497)
.....|.++..+|-+.+..+.. ..+++..+++..+-+. |-+|+.. ..+...+..+.+.+++.
T Consensus 103 ~~~~~p~r~~~~~~l~~~~~~~------------a~~el~~~~~~~g~~G---v~l~~~~~~~~l~d~~~~~~~~~~~e~ 167 (336)
T 2wm1_A 103 TVVSYPRRFVGLGTLPMQAPEL------------AVKEMERCVKELGFPG---VQIGTHVNEWDLNAQELFPVYAAAERL 167 (336)
T ss_dssp HHHHSTTTEEEEECCCTTSHHH------------HHHHHHHHHHTSCCSE---EEEESEETTEETTCGGGHHHHHHHHHH
T ss_pred HHHhccCceeEEEeCCCcCHHH------------HHHHHHHHHHccCCeE---EEECCcCCCCCCCCccHHHHHHHHHHc
Confidence 3344556677666553321100 1355666664332222 3334332 24556788888999998
Q ss_pred CCCeEEEEeC
Q 044823 310 KKPFIWVSRV 319 (497)
Q Consensus 310 ~~~~i~~~~~ 319 (497)
+..+++-.+.
T Consensus 168 ~lpv~iH~~~ 177 (336)
T 2wm1_A 168 KCSLFVHPWD 177 (336)
T ss_dssp TCEEEEECCS
T ss_pred CCEEEECCCC
Confidence 9888776654
No 155
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=32.52 E-value=79 Score=27.85 Aligned_cols=38 Identities=8% Similarity=0.070 Sum_probs=28.9
Q ss_pred CcEEEEecCCCcC-----------CHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 7 NFHFILLPFLAQG-----------HLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 7 ~~~vl~~~~p~~G-----------Hv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
++||+++.....+ ...=+......|.++|++|+++++.
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~ 51 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSET 51 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCC
Confidence 3588888875322 4467777888899999999999875
No 156
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=32.34 E-value=1.3e+02 Score=25.47 Aligned_cols=103 Identities=16% Similarity=0.004 Sum_probs=58.6
Q ss_pred hhhhhhhccCCCCeEEEEeeCCcccCCHhhHHHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeec
Q 044823 269 PECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRG 348 (497)
Q Consensus 269 ~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~ 348 (497)
.++-.+|..+. ...||-|... .......++..+.+-+++-++........ .+. ..-.+.++.+
T Consensus 23 ~~lg~~La~~g---~~lV~GGg~~----GiM~aa~~gA~~~gG~~iGv~p~~l~~~e-----~~~-----~~~~~~~~~~ 85 (191)
T 1t35_A 23 AELGVYMAEQG---IGLVYGGSRV----GLMGTIADAIMENGGTAIGVMPSGLFSGE-----VVH-----QNLTELIEVN 85 (191)
T ss_dssp HHHHHHHHHTT---CEEEECCCCS----HHHHHHHHHHHTTTCCEEEEEETTCCHHH-----HTT-----CCCSEEEEES
T ss_pred HHHHHHHHHCC---CEEEECCCcc----cHHHHHHHHHHHcCCeEEEEeCchhcccc-----ccc-----CCCCccccCC
Confidence 45666776654 4556665332 34556666666677777777654321100 110 0012344556
Q ss_pred ccch-HhhhccCCccccccccCchhHHHH---H------HhCCcEeccCC
Q 044823 349 WAPQ-VMILSHPAVGGFLTHCGWNSSLEG---I------SAGVQMLTWPL 388 (497)
Q Consensus 349 ~~pq-~~lL~~~~~~~~ItHgG~gs~~ea---l------~~GvP~l~~P~ 388 (497)
..+. +.++..-+-.+++--||.||+.|. + .+++|++++-.
T Consensus 86 ~~~~Rk~~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 86 GMHERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp HHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred CHHHHHHHHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 6665 334443333567888999988765 4 37899999864
No 157
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=32.33 E-value=65 Score=25.19 Aligned_cols=35 Identities=6% Similarity=-0.035 Sum_probs=26.0
Q ss_pred EEecCCCcC--CHHHHHHHHHHHHhCCCeE-EEEeCCc
Q 044823 11 ILLPFLAQG--HLIPMFDIARLLAQHGATA-TIVTTPV 45 (497)
Q Consensus 11 l~~~~p~~G--Hv~P~l~LA~~L~~rGh~V-t~~~~~~ 45 (497)
++++.+.+| .....+.+|.++.+.||+| .++....
T Consensus 5 iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~d 42 (130)
T 2hy5_A 5 LQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHD 42 (130)
T ss_dssp EEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGG
T ss_pred EEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEech
Confidence 344444454 4667799999999999999 8887663
No 158
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=32.17 E-value=23 Score=32.44 Aligned_cols=32 Identities=9% Similarity=0.127 Sum_probs=27.0
Q ss_pred CcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 7 NFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
++||.|+-.+..|. .+|+.|+++||+|+++..
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 46899998888874 689999999999998854
No 159
>4gh9_A Polymerase cofactor VP35; viral polymerase, interferon inhibition, double stranded VIR viral protein,RNA binding protein; 1.65A {Marburg virus}
Probab=32.12 E-value=1.4e+02 Score=23.01 Aligned_cols=68 Identities=12% Similarity=0.084 Sum_probs=42.9
Q ss_pred cccCHHHHHHHHHHHhcCChhhHHHHHHHHHHH-------------HHHHHHHhhCCChHHHHHHHHHHHhhccCccCCc
Q 044823 425 VLVKKEDVETAINILMDDGEERDGRRRRAKEFG-------------ELAKRALEEGGSSYNNIKFFHPRYHATADLRSDV 491 (497)
Q Consensus 425 ~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~-------------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 491 (497)
+.+++.+|+..+-.-| |..|..+-+-++-+. +.+.+++++|.+..+++-.+-.++...-+..++|
T Consensus 23 P~iSAKDL~~imydHL--PGfgTaFHqLvQVicKigkd~~~~~~i~~~f~asLaeGdspQcALiqitkrip~Fqda~Ppv 100 (146)
T 4gh9_A 23 PNLSAKDLALLLFTHL--PGNNTPFHILAQVLSKIAYKSGKSGAFLDAFHQILSEGENAQAALTRLSRTFDAFLGVVPPV 100 (146)
T ss_dssp --CCHHHHHHHHHTTC--SSSSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHSGGGTTCCCCE
T ss_pred CCcCHHHHHHHHHHhC--CCCChHHHHHHHHHHHHhcccCchhHHHHHHHHHHhcCCCcchhhHhhhhccchhhcCCCCe
Confidence 3577887776665544 444445555555444 3466667777777777777777777777777777
Q ss_pred ccc
Q 044823 492 NVV 494 (497)
Q Consensus 492 ~~~ 494 (497)
.|+
T Consensus 101 ihi 103 (146)
T 4gh9_A 101 IRV 103 (146)
T ss_dssp EEC
T ss_pred EEe
Confidence 665
No 160
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=31.91 E-value=54 Score=26.74 Aligned_cols=37 Identities=19% Similarity=0.012 Sum_probs=25.6
Q ss_pred CeEEEEeeCCcccCCHhhHHHHHHHHHhC-C-CCeEEEE
Q 044823 281 SSVVYVCLGSICNLTSSQLIELGLGLEAS-K-KPFIWVS 317 (497)
Q Consensus 281 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~-~-~~~i~~~ 317 (497)
..+|+|+-||........+..+.+.+++. + ..|.+.+
T Consensus 25 ~avlLv~HGS~~p~~~~~~~~la~~l~~~~~~~~V~~af 63 (156)
T 1tjn_A 25 RGLVIVGHGSQLNHYREVMELHRKRIEESGAFDEVKIAF 63 (156)
T ss_dssp EEEEEEECCTTSTTHHHHHHHHHHHHHHHTSSSEEEEEE
T ss_pred cCEEEEECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEEE
Confidence 45999999997544466677888888753 3 4555553
No 161
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=31.63 E-value=38 Score=33.36 Aligned_cols=34 Identities=21% Similarity=0.288 Sum_probs=27.3
Q ss_pred HHHHHHhhcCCCCeEEEECCCCcchHHHHHHcCCCeEEE
Q 044823 107 PFENLFREQTPQPCCIISDMCIPWTVDTAAKFNVPRIIF 145 (497)
Q Consensus 107 ~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~i~~ 145 (497)
.+++++++ .+||++|.... ...+|+++|||++.+
T Consensus 366 ~le~~i~~--~~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 DLEHAARA--GQAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHH--HTCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHHh--cCCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 45666777 79999998844 677999999999974
No 162
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=31.55 E-value=1.6e+02 Score=27.82 Aligned_cols=40 Identities=10% Similarity=0.035 Sum_probs=34.2
Q ss_pred EEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 044823 9 HFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAA 48 (497)
Q Consensus 9 ~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~ 48 (497)
-+++...|+.|-..-.+.+|..++.+|..|.|++.+....
T Consensus 76 li~I~G~pGsGKTtlal~la~~~~~~g~~vlyi~~E~s~~ 115 (366)
T 1xp8_A 76 ITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALD 115 (366)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred EEEEEcCCCCChHHHHHHHHHHHHHCCCeEEEEECCCChh
Confidence 4667777899999999999999999999999999886443
No 163
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=31.51 E-value=1.8e+02 Score=22.34 Aligned_cols=37 Identities=11% Similarity=-0.035 Sum_probs=24.8
Q ss_pred CeEEEEeeCCcccCCHhhHHHHHHHHHhCCCCeEEEE
Q 044823 281 SSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVS 317 (497)
Q Consensus 281 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~ 317 (497)
..+|+|+.||........+..+.+.++.....+.+.+
T Consensus 6 ~alllv~HGS~~~~~~~~~~~l~~~l~~~~~~V~~a~ 42 (126)
T 3lyh_A 6 HQIILLAHGSSDARWCETFEKLAEPTVESIENAAIAY 42 (126)
T ss_dssp EEEEEEECCCSCHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHHhhcCCEEEEE
Confidence 3599999999754344567777777765445555554
No 164
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=30.94 E-value=22 Score=33.74 Aligned_cols=32 Identities=13% Similarity=0.077 Sum_probs=26.5
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
+||.|+-.+..|. .+|..|+++||+|+++...
T Consensus 16 ~kI~iIG~G~mG~-----~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 16 NKAVVFGSGAFGT-----ALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEEECCSHHHH-----HHHHHHTTTEEEEEEECSC
T ss_pred CeEEEECCCHHHH-----HHHHHHHhCCCEEEEEECC
Confidence 3899998887774 5789999999999998643
No 165
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=30.83 E-value=42 Score=30.21 Aligned_cols=50 Identities=12% Similarity=0.047 Sum_probs=41.7
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHH--------HHhC-CCeEEEEeCCcchhhhHHHHH
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARL--------LAQH-GATATIVTTPVNAARFKTVLA 55 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~--------L~~r-Gh~Vt~~~~~~~~~~~~~~~~ 55 (497)
.+.+|++.+.++..|-....-++.. |..+ |++|.........+.+.+.+.
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~aa~ 177 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKKAV 177 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHHHHH
Confidence 4679999999999999999999988 9999 999999887655555555443
No 166
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=30.42 E-value=39 Score=31.15 Aligned_cols=34 Identities=15% Similarity=0.121 Sum_probs=27.8
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
..+|||.|+-.+..| ..+|+.|+++||+|+++..
T Consensus 19 ~~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 19 SHMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred ccCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 456899999877766 5689999999999998854
No 167
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=30.41 E-value=54 Score=27.00 Aligned_cols=38 Identities=16% Similarity=0.276 Sum_probs=29.7
Q ss_pred CcEEEEecCCCc---CCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 7 NFHFILLPFLAQ---GHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 7 ~~~vl~~~~p~~---GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
..+|+++|.-+. --..+.-.|++.|.++|.+|.|..+|
T Consensus 23 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 23 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 346777765431 23568899999999999999999999
No 168
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=30.13 E-value=31 Score=31.66 Aligned_cols=34 Identities=24% Similarity=0.202 Sum_probs=27.8
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
+.++|.++-.+..|+ .+|..|+++||+|+++...
T Consensus 14 ~~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 456899998888886 5788999999999988543
No 169
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=30.08 E-value=68 Score=29.95 Aligned_cols=73 Identities=16% Similarity=0.143 Sum_probs=50.2
Q ss_pred CHhhHHHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCCccccccccCchhHH
Q 044823 295 TSSQLIELGLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPAVGGFLTHCGWNSSL 374 (497)
Q Consensus 295 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~ItHgG~gs~~ 374 (497)
+.+..+.+.+++.+...+.||...++... .++.++++...+-++|.. ||=+.-...++
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~--------------------~rlL~~lD~~~i~~~PK~--~~GySDiTaL~ 120 (331)
T 4e5s_A 63 ISSRVQDLHEAFRDPNVKAILTTLGGYNS--------------------NGLLKYLDYDLIRENPKF--FCGYSDITALN 120 (331)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSCG--------------------GGGGGGCCHHHHHTSCCE--EEECGGGHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccccH--------------------HHHHhhcChhHHHhCCeE--EEEecchHHHH
Confidence 45677889999999999999998887532 133355655555556655 77777777777
Q ss_pred HHHH--hCCcEeccCCc
Q 044823 375 EGIS--AGVQMLTWPLF 389 (497)
Q Consensus 375 eal~--~GvP~l~~P~~ 389 (497)
-+++ .|+..+-=|+.
T Consensus 121 ~al~~~~G~~t~hGp~~ 137 (331)
T 4e5s_A 121 NAIYTKTGLVTYSGPHF 137 (331)
T ss_dssp HHHHHHHCBCEEECCCG
T ss_pred HHHHHhhCCcEEEccch
Confidence 7766 47776665553
No 170
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=30.03 E-value=61 Score=27.24 Aligned_cols=39 Identities=31% Similarity=0.339 Sum_probs=26.9
Q ss_pred CCcEEEEecCCCcCCHHHHHH-HHHHHHhCCCeEEEEeCC
Q 044823 6 SNFHFILLPFLAQGHLIPMFD-IARLLAQHGATATIVTTP 44 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~-LA~~L~~rGh~Vt~~~~~ 44 (497)
.+|||+++.....|+..-+.. +++.|.+.|++|.++...
T Consensus 4 ~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 43 (200)
T 2a5l_A 4 SSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVP 43 (200)
T ss_dssp -CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred CcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 356888777666787665544 556677789999888654
No 171
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=29.94 E-value=57 Score=29.81 Aligned_cols=38 Identities=8% Similarity=0.007 Sum_probs=31.5
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
+++.|+|..-++.|=..-...||..|+++|+.|.++=.
T Consensus 40 ~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~ 77 (307)
T 3end_A 40 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGC 77 (307)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 34556666666899999999999999999999999943
No 172
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=29.93 E-value=56 Score=27.04 Aligned_cols=37 Identities=19% Similarity=0.372 Sum_probs=29.4
Q ss_pred cEEEEecCCC---cCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 8 FHFILLPFLA---QGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 8 ~~vl~~~~p~---~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
.+|+++|.-+ .--..+.-.|++.|.++|.+|.|..+|
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 4677776542 123568899999999999999999998
No 173
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=29.47 E-value=29 Score=32.54 Aligned_cols=38 Identities=11% Similarity=-0.030 Sum_probs=27.6
Q ss_pred CCCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCC-eEEEEeCC
Q 044823 2 ASETSNFHFILLPFLAQGHLIPMFDIARLLAQHGA-TATIVTTP 44 (497)
Q Consensus 2 ~~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh-~Vt~~~~~ 44 (497)
+..++++||.++-.+..|.. ||..|+..|| +|+++-..
T Consensus 4 ~~~~~~~kI~VIGaG~vG~~-----lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 4 ALVQRRKKVAMIGSGMIGGT-----MGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CCCSCCCEEEEECCSHHHHH-----HHHHHHHHTCCEEEEECSS
T ss_pred CcCCCCCEEEEECCCHHHHH-----HHHHHHhCCCCeEEEEECC
Confidence 33445689999876555543 8899999999 98887543
No 174
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=29.36 E-value=2.9e+02 Score=24.22 Aligned_cols=40 Identities=5% Similarity=-0.266 Sum_probs=24.8
Q ss_pred hchHHHHHHHhhcCCCCeEEEECCCCcch-HHHHHHcCCCeEEE
Q 044823 103 KLQLPFENLFREQTPQPCCIISDMCIPWT-VDTAAKFNVPRIIF 145 (497)
Q Consensus 103 ~~~~~l~~~l~~~~~~~D~vI~D~~~~~a-~~~A~~lgIP~i~~ 145 (497)
.+.+.+.++.+ .++|+||.-.++..+ ..+.+.+++|++.+
T Consensus 57 ~l~~~~~~l~~---~g~d~iviaCnt~~~l~~lr~~~~iPvigi 97 (245)
T 3qvl_A 57 GVLEQIRAGRE---QGVDGHVIASFGDPGLLAARELAQGPVIGI 97 (245)
T ss_dssp HHHHHHHHHHH---HTCSEEEEC-CCCTTHHHHHHHCSSCEEEH
T ss_pred HHHHHHHHHHH---CCCCEEEEeCCChhHHHHHHHHcCCCEECc
Confidence 34444444444 489999877766433 45667789998763
No 175
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=29.30 E-value=69 Score=28.46 Aligned_cols=40 Identities=18% Similarity=0.133 Sum_probs=26.3
Q ss_pred CCCCcEEEEecCCCc--CCHHHHHH-HHHHHHhCCCeEEEEeC
Q 044823 4 ETSNFHFILLPFLAQ--GHLIPMFD-IARLLAQHGATATIVTT 43 (497)
Q Consensus 4 ~~~~~~vl~~~~p~~--GHv~P~l~-LA~~L~~rGh~Vt~~~~ 43 (497)
.+.+|||+++..... |...-++. +++.|.+.|++|.++--
T Consensus 31 ~~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 31 STHRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp CCSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred cCCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 356688888776654 55444444 55666667999888753
No 176
>2hl7_A Cytochrome C-type biogenesis protein CCMH; three-helices bundle, oxidoreductase; HET: PG4; 1.70A {Pseudomonas aeruginosa}
Probab=29.20 E-value=88 Score=22.54 Aligned_cols=42 Identities=17% Similarity=0.238 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhhccCccCCc
Q 044823 450 RRRAKEFGELAKRALEEGGSSYNNIKFFHPRYHATADLRSDV 491 (497)
Q Consensus 450 ~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 491 (497)
..-|+.|+...+..+.+|-+-...++.|+.++-..=-+++++
T Consensus 42 a~iA~dlR~~V~~~l~~G~sd~eI~~~~v~RYG~fVly~Pp~ 83 (84)
T 2hl7_A 42 APIAADLRKQIYGQLQQGKSDGEIVDYMVARYGDFVRYKPPV 83 (84)
T ss_dssp SHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHTTTCEECCC-
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhcCCeeeeeCCC
Confidence 367888888888888889887777888888876655444443
No 177
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=28.93 E-value=51 Score=30.38 Aligned_cols=33 Identities=6% Similarity=0.023 Sum_probs=27.3
Q ss_pred CcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 044823 7 NFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPV 45 (497)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~ 45 (497)
+|+|+++..+ ....+++++.++||+|.++.+..
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCC
Confidence 4689998876 46789999999999999987653
No 178
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=28.89 E-value=44 Score=24.98 Aligned_cols=34 Identities=18% Similarity=0.152 Sum_probs=24.2
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhCC-CeEEEEeCC
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQHG-ATATIVTTP 44 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~rG-h~Vt~~~~~ 44 (497)
.+++|+++-.+..| ..+++.|.++| ++|+++...
T Consensus 4 ~~~~v~I~G~G~iG-----~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 4 MRWNICVVGAGKIG-----QMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp TCEEEEEECCSHHH-----HHHHHHHHHCSSEEEEEEESC
T ss_pred CcCeEEEECCCHHH-----HHHHHHHHhCCCceEEEEeCC
Confidence 35688887443333 46789999999 999887653
No 179
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=28.61 E-value=53 Score=27.69 Aligned_cols=37 Identities=16% Similarity=0.257 Sum_probs=26.2
Q ss_pred CcEEEEecCCCcCCHHHHHH-HHHHHHhCCCeEEEEeCC
Q 044823 7 NFHFILLPFLAQGHLIPMFD-IARLLAQHGATATIVTTP 44 (497)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~-LA~~L~~rGh~Vt~~~~~ 44 (497)
+|||+++... .|+..-+.. +++.|.+.|++|.++-..
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~ 41 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehh
Confidence 4688888777 887665554 455566679999888554
No 180
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=28.47 E-value=2.8e+02 Score=25.96 Aligned_cols=39 Identities=8% Similarity=0.033 Sum_probs=32.4
Q ss_pred EEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 044823 9 HFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNA 47 (497)
Q Consensus 9 ~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~ 47 (497)
-++++-.++.|=..=++.++..+...|..|.|+..+...
T Consensus 63 i~~I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~s~ 101 (356)
T 3hr8_A 63 IVEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHAL 101 (356)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 356666778999999999999999999999999887543
No 181
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=28.45 E-value=27 Score=31.96 Aligned_cols=40 Identities=20% Similarity=0.267 Sum_probs=24.4
Q ss_pred CCCCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 1 MASETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
|.+...+++|+++ ++.|.+- ..|+++|.++||+|+.+.-.
T Consensus 1 M~~~~~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 1 MQRNTLKHRILIT--GGAGFIG--GHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp ------CCEEEEE--TTTSHHH--HHHHHHHHHTTCCEEEECCC
T ss_pred CCcccCCCeEEEE--CCCChHH--HHHHHHHHHCCCEEEEEecC
Confidence 5544446677665 3445443 36889999999999998653
No 182
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=28.39 E-value=79 Score=27.63 Aligned_cols=40 Identities=13% Similarity=0.080 Sum_probs=27.5
Q ss_pred HHHHHHhhcCCCCeEEEECCCCcc-------hHHHHHHcCCCeEEEe
Q 044823 107 PFENLFREQTPQPCCIISDMCIPW-------TVDTAAKFNVPRIIFH 146 (497)
Q Consensus 107 ~l~~~l~~~~~~~D~vI~D~~~~~-------a~~~A~~lgIP~i~~~ 146 (497)
.+.++++.+..+||++++|..... |..+...+|+|+|.+.
T Consensus 92 ~~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 92 LFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVA 138 (225)
T ss_dssp HHHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEE
Confidence 444555555568999999986544 3345666689999863
No 183
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=28.33 E-value=27 Score=27.68 Aligned_cols=33 Identities=15% Similarity=0.158 Sum_probs=26.5
Q ss_pred CcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 7 NFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
+.||+++-.+..| ..+|+.|.++||+|+++...
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 4688888766555 47899999999999999764
No 184
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=28.32 E-value=64 Score=28.06 Aligned_cols=43 Identities=16% Similarity=0.189 Sum_probs=23.7
Q ss_pred CCCCCCCcEEEEec-CCCc----CCHHHHH--HHHHHHHhCCCeEEEEeC
Q 044823 1 MASETSNFHFILLP-FLAQ----GHLIPMF--DIARLLAQHGATATIVTT 43 (497)
Q Consensus 1 m~~~~~~~~vl~~~-~p~~----GHv~P~l--~LA~~L~~rGh~Vt~~~~ 43 (497)
|-+..++|||+++. +|-. +-++-.+ .+++.|.+.||+|.++-.
T Consensus 19 ~~~~~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL 68 (218)
T 3rpe_A 19 YFQSNAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTV 68 (218)
T ss_dssp C----CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEG
T ss_pred ccccccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEEC
Confidence 33446677887776 4432 2344332 355566678999998754
No 185
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=28.31 E-value=48 Score=25.77 Aligned_cols=34 Identities=26% Similarity=0.179 Sum_probs=23.7
Q ss_pred HHhhcCCCCeEEEECCCCc--chHHHHHHc---CCCeEEEe
Q 044823 111 LFREQTPQPCCIISDMCIP--WTVDTAAKF---NVPRIIFH 146 (497)
Q Consensus 111 ~l~~~~~~~D~vI~D~~~~--~a~~~A~~l---gIP~i~~~ 146 (497)
.+++ .+||+||.|...+ -|..+++.+ ++|.|.++
T Consensus 48 ~~~~--~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 48 IARK--GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHH--CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHh--CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 4455 7999999998664 455565554 78877653
No 186
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=28.23 E-value=53 Score=25.66 Aligned_cols=36 Identities=19% Similarity=0.015 Sum_probs=24.1
Q ss_pred eEEEEeeCCcccCCHhhHHHHHHHHHhC-C-CCeEEEE
Q 044823 282 SVVYVCLGSICNLTSSQLIELGLGLEAS-K-KPFIWVS 317 (497)
Q Consensus 282 ~vv~vs~GS~~~~~~~~~~~~~~al~~~-~-~~~i~~~ 317 (497)
.+|+|+.||........+..+.+.+++. + ..+.+.+
T Consensus 5 alllv~HGS~~~~~~~~~~~la~~l~~~~~~~~V~~a~ 42 (133)
T 2xws_A 5 GLVIVGHGSQLNHYREVMELHRKRIEESGAFDEVKIAF 42 (133)
T ss_dssp EEEEEECSCCCHHHHHHHHHHHHHHHHHTSSSEEEEEE
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHHhhCCCCcEEeee
Confidence 5899999996533445677777777753 3 4555554
No 187
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=28.19 E-value=56 Score=29.71 Aligned_cols=33 Identities=18% Similarity=0.178 Sum_probs=25.7
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
++|||.|+-.+..|. .+|+.|.+.||+|+++..
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 467999998777775 468889999999987643
No 188
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=28.14 E-value=43 Score=30.60 Aligned_cols=33 Identities=12% Similarity=0.096 Sum_probs=26.9
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
+++||.|+-.+..|. .+|+.|+++||+|+++..
T Consensus 2 ~m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~ 34 (302)
T 2h78_A 2 HMKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (302)
T ss_dssp -CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 357999998888774 678999999999998843
No 189
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=28.01 E-value=62 Score=30.05 Aligned_cols=36 Identities=14% Similarity=0.121 Sum_probs=27.2
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPV 45 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~ 45 (497)
+++|||+|+-.|.++ +..-++|.++||+|..+.+..
T Consensus 2 ~~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 37 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQP 37 (317)
T ss_dssp CTTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCC
T ss_pred CCceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCC
Confidence 578999999888654 344577888899998776643
No 190
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=27.95 E-value=58 Score=28.68 Aligned_cols=36 Identities=22% Similarity=0.233 Sum_probs=29.1
Q ss_pred EEEEec--CCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 9 HFILLP--FLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 9 ~vl~~~--~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
+++.+. -++.|-..-...||..|+++|++|.++=..
T Consensus 3 ~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (260)
T 3q9l_A 3 RIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFA 40 (260)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 444443 457899999999999999999999998544
No 191
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=27.91 E-value=19 Score=33.21 Aligned_cols=33 Identities=12% Similarity=0.187 Sum_probs=27.0
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhC-----C-CeEEEEeC
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQH-----G-ATATIVTT 43 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~r-----G-h~Vt~~~~ 43 (497)
.+|||.|+-.+..|. .+|..|+++ | |+|+++..
T Consensus 7 ~~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CCEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEc
Confidence 457999998888774 568888888 9 99999864
No 192
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=27.80 E-value=39 Score=31.52 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=27.9
Q ss_pred CcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 7 NFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
.+||.|+-.+..| ..+|..|+++||+|+++...
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 5789999888888 47899999999999998643
No 193
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=27.71 E-value=1.3e+02 Score=30.97 Aligned_cols=98 Identities=11% Similarity=0.051 Sum_probs=54.5
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchh-------hhHHHHHHhhhcCCCeEEEEecCCccccCCCC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAA-------RFKTVLARALQCRLQIRLIEIQFPWQEAGLPE 80 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~ 80 (497)
|||+|+..|..| ..--++|.++||+|..+.+..... .+++..... ++.+... .
T Consensus 1 ~ri~~~~s~~~~-----~~~l~~l~~~~~~i~~v~t~~~~~~~~~~~~~~~~~a~~~-----~ip~~~~----------~ 60 (660)
T 1z7e_A 1 MKTVVFAYHDMG-----CLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAER-----GIPVYAP----------D 60 (660)
T ss_dssp CEEEEEECHHHH-----HHHHHHHHHTTCEEEEEECCCC--------CCHHHHHHHH-----TCCEECC----------S
T ss_pred CEEEEEEeCHHH-----HHHHHHHHhCCCCEEEEEeCCCCCccCcCccHHHHHHHHc-----CCCEecc----------C
Confidence 578888766433 223566777899998776643322 133333222 4554431 1
Q ss_pred CCCCCCCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCC-cchHHHHHHcCCCeEEEech
Q 044823 81 GCENFDMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCI-PWTVDTAAKFNVPRIIFHGF 148 (497)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~a~~~A~~lgIP~i~~~~~ 148 (497)
.. .. +++.+.+++ .++|+||+=.|. .-...+-......++.++++
T Consensus 61 ~~------~~---------------~~~~~~l~~--~~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~s 106 (660)
T 1z7e_A 61 NV------NH---------------PLWVERIAQ--LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (660)
T ss_dssp CT------TS---------------HHHHHHHHH--HCCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred CC------Cc---------------HHHHHHHHh--cCCCEEEEcCcccccCHHHHhcCCCCeEEecCC
Confidence 10 00 133455666 699999876553 44455556666677888776
No 194
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=27.69 E-value=78 Score=26.89 Aligned_cols=38 Identities=21% Similarity=0.126 Sum_probs=30.8
Q ss_pred CcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 7 NFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
+..++++.++..|+-.-+..+++.|+++|+.|..+-..
T Consensus 31 ~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~~ 68 (241)
T 3f67_A 31 PLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELY 68 (241)
T ss_dssp CEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEeccc
Confidence 34577777788888888999999999999998877543
No 195
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=27.65 E-value=35 Score=32.37 Aligned_cols=34 Identities=18% Similarity=0.187 Sum_probs=29.0
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
.+|||.++-.+..|. .+|..|+++||+|++....
T Consensus 28 ~~mkI~VIGaG~mG~-----alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 28 FKHPIAILGAGSWGT-----ALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCSCEEEECCSHHHH-----HHHHHHHTTTCCEEEECSC
T ss_pred cCCeEEEECccHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 468999999988884 6899999999999998764
No 196
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=27.58 E-value=2.8e+02 Score=23.37 Aligned_cols=41 Identities=10% Similarity=-0.105 Sum_probs=30.1
Q ss_pred HHHHHHHhhcCCCCeEEEECCCCcchHHHHHHcCCCeEEEechhHHH
Q 044823 106 LPFENLFREQTPQPCCIISDMCIPWTVDTAAKFNVPRIIFHGFSCFC 152 (497)
Q Consensus 106 ~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~i~~~~~~~~~ 152 (497)
..+.++.+ .++|+||.| .....+|+++|+|.+.+.++.-..
T Consensus 133 ~~i~~l~~---~G~~vvVG~---~~~~~~A~~~Gl~~vli~sg~eSI 173 (196)
T 2q5c_A 133 TLISKVKT---ENIKIVVSG---KTVTDEAIKQGLYGETINSGEESL 173 (196)
T ss_dssp HHHHHHHH---TTCCEEEEC---HHHHHHHHHTTCEEEECCCCHHHH
T ss_pred HHHHHHHH---CCCeEEECC---HHHHHHHHHcCCcEEEEecCHHHH
Confidence 34444444 599999998 346889999999999987754443
No 197
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=27.53 E-value=63 Score=27.27 Aligned_cols=37 Identities=16% Similarity=0.293 Sum_probs=29.0
Q ss_pred cEEEEecCCC---cCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 8 FHFILLPFLA---QGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 8 ~~vl~~~~p~---~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
.+|+++|.-+ .--.++.-.|++.|.++|.+|.|..+|
T Consensus 47 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 86 (203)
T 2fsv_C 47 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 86 (203)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 4677776542 123568899999999999999999998
No 198
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=27.52 E-value=47 Score=30.12 Aligned_cols=33 Identities=24% Similarity=0.083 Sum_probs=26.5
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
+.+||.++-.+..| ..+|..|+++||+|+++-.
T Consensus 3 ~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 3 GITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp SCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 45689999777766 4688999999999999854
No 199
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=27.51 E-value=72 Score=28.97 Aligned_cols=39 Identities=15% Similarity=0.276 Sum_probs=30.5
Q ss_pred CCCcEEEEecCCCcCCHHHH--HHHHHHHHhCC-CeEEEEeCC
Q 044823 5 TSNFHFILLPFLAQGHLIPM--FDIARLLAQHG-ATATIVTTP 44 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~--l~LA~~L~~rG-h~Vt~~~~~ 44 (497)
.++.|||+++. ..+|-.+. -.|++.|.+.| .+|++...+
T Consensus 2 ~~~~kvLiv~G-~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLITG-QNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEES-CCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEEcC-CCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 36899999944 44886554 57888888898 999999765
No 200
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=27.37 E-value=46 Score=30.61 Aligned_cols=31 Identities=13% Similarity=0.118 Sum_probs=27.0
Q ss_pred CcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEe
Q 044823 7 NFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVT 42 (497)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~ 42 (497)
+.||.|+-.+..|. ++|+.|.++||+|+++-
T Consensus 3 M~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~d 33 (300)
T 3obb_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFD 33 (300)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEEC
T ss_pred cCEEEEeeehHHHH-----HHHHHHHhCCCeEEEEc
Confidence 35899999999995 68999999999999883
No 201
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=27.19 E-value=1.3e+02 Score=22.80 Aligned_cols=39 Identities=15% Similarity=0.077 Sum_probs=31.6
Q ss_pred CCCCcEEEEecCCCcCCHH-HHHHHHHHHHhCCCeEEEEe
Q 044823 4 ETSNFHFILLPFLAQGHLI-PMFDIARLLAQHGATATIVT 42 (497)
Q Consensus 4 ~~~~~~vl~~~~p~~GHv~-P~l~LA~~L~~rGh~Vt~~~ 42 (497)
..+++||+++|..+.|.-. =.-.|-+.+.+.|.++.+-.
T Consensus 18 ~~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 18 QGSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp SCSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 3567899999999999977 46788888989999875554
No 202
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=27.14 E-value=53 Score=28.14 Aligned_cols=34 Identities=18% Similarity=0.110 Sum_probs=24.3
Q ss_pred CcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 7 NFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
+++|+++ ++.|.+- ..|++.|.++||+|+.+.-.
T Consensus 4 m~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CCEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSC
T ss_pred CCEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcC
Confidence 4576655 4445444 47889999999999998654
No 203
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=27.08 E-value=82 Score=23.74 Aligned_cols=38 Identities=13% Similarity=0.121 Sum_probs=29.7
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
+.|||+++|..+.|+-.=.-.+-+.+.++|.++.+-+.
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~ 40 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAI 40 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 34889999999988886666777888888988765443
No 204
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=27.05 E-value=85 Score=24.06 Aligned_cols=36 Identities=6% Similarity=-0.048 Sum_probs=27.0
Q ss_pred EEEecCCCcCCH--HHHHHHHHHHHhCCCeEEEEeCCc
Q 044823 10 FILLPFLAQGHL--IPMFDIARLLAQHGATATIVTTPV 45 (497)
Q Consensus 10 vl~~~~p~~GHv--~P~l~LA~~L~~rGh~Vt~~~~~~ 45 (497)
+.+++.+-+|+- .-.+.+|.++.+.||+|.++-...
T Consensus 5 ~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~D 42 (119)
T 2d1p_B 5 AFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIAD 42 (119)
T ss_dssp EEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGG
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehH
Confidence 344455556766 667889999999999999987663
No 205
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=27.02 E-value=1e+02 Score=23.56 Aligned_cols=39 Identities=8% Similarity=0.111 Sum_probs=25.7
Q ss_pred CCCCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 1 MASETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
|...+++++|+++- .+-.-.-.|.+.|.+.|++|..+..
T Consensus 1 M~~~~~~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (142)
T 3cg4_A 1 MSLAEHKGDVMIVD----DDAHVRIAVKTILSDAGFHIISADS 39 (142)
T ss_dssp -----CCCEEEEEC----SCHHHHHHHHHHHHHTTCEEEEESS
T ss_pred CCCCCCCCeEEEEc----CCHHHHHHHHHHHHHCCeEEEEeCC
Confidence 66667788888885 4566667788888888998876543
No 206
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=27.02 E-value=40 Score=30.38 Aligned_cols=32 Identities=16% Similarity=0.048 Sum_probs=25.7
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
|||.|+-.+..|. .+|..|+++||+|+++...
T Consensus 1 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALGQ-----LWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHHH-----HHHHHHHhCCCCEEEEEcC
Confidence 4788887776663 6899999999999998643
No 207
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=26.98 E-value=65 Score=27.28 Aligned_cols=37 Identities=19% Similarity=0.368 Sum_probs=29.1
Q ss_pred cEEEEecCCC---cCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 8 FHFILLPFLA---QGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 8 ~~vl~~~~p~---~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
.+|+++|.-+ .--..+.-.|++.|.++|.+|.|..+|
T Consensus 46 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 85 (207)
T 1djl_A 46 NSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHP 85 (207)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCc
Confidence 4677776542 123578899999999999999999998
No 208
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=26.90 E-value=2.1e+02 Score=23.96 Aligned_cols=59 Identities=10% Similarity=0.120 Sum_probs=37.8
Q ss_pred EEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc---chhhhHHHHHHhhhcCCCeEEEEec
Q 044823 10 FILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPV---NAARFKTVLARALQCRLQIRLIEIQ 70 (497)
Q Consensus 10 vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~i~ 70 (497)
|+|+..+...+-.....+++.|++.|++|.++.... +.+ ++....... .+.+-+++.+|
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~~~~~-l~~la~~~n-~~~~s~~~~~~ 171 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQNESA-LQHFIDAAN-SSDSCHLVSIP 171 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEESCC---CH-HHHHHHHHC-STTCCEEEEEC
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeCCCCccHH-HHHHHHhcc-CCCceEEEEec
Confidence 455556555677888999999999999999875432 223 444443322 23356677665
No 209
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=26.89 E-value=2.9e+02 Score=23.39 Aligned_cols=95 Identities=8% Similarity=-0.077 Sum_probs=0.0
Q ss_pred hhhhhhccCCCCeEEEEeeCCcccCCHhhHHHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeee--
Q 044823 270 ECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIR-- 347 (497)
Q Consensus 270 ~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~-- 347 (497)
++-.+|.++. ...||-|... ......++..+.+-++|-++..... ..+ ...+.+.
T Consensus 49 ~lg~~LA~~G---~~vVsGg~~G-----iM~aa~~gAl~~GG~~iGVlP~e~~--------~~~-------~~~~~~~~~ 105 (195)
T 1rcu_A 49 ELGRTLAKKG---YLVFNGGRDG-----VMELVSQGVREAGGTVVGILPDEEA--------GNP-------YLSVAVKTG 105 (195)
T ss_dssp HHHHHHHHTT---CEEEECCSSH-----HHHHHHHHHHHTTCCEEEEESTTCC--------CCT-------TCSEEEECC
T ss_pred HHHHHHHHCC---CEEEeCCHHH-----HHHHHHHHHHHcCCcEEEEeCCccc--------CCC-------CcceeeecC
Q ss_pred cccch-HhhhccCCccccccccCchhHHHH---HHhCCcEeccC
Q 044823 348 GWAPQ-VMILSHPAVGGFLTHCGWNSSLEG---ISAGVQMLTWP 387 (497)
Q Consensus 348 ~~~pq-~~lL~~~~~~~~ItHgG~gs~~ea---l~~GvP~l~~P 387 (497)
...++ +.++..-+-.+++-=||.||+.|+ +.+++|+++++
T Consensus 106 ~~f~~Rk~~m~~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln 149 (195)
T 1rcu_A 106 LDFQMRSFVLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLR 149 (195)
T ss_dssp CCHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEET
T ss_pred CCHHHHHHHHHHhCCEEEEecCCCcHHHHHHHHHhcCCCEEEEC
No 210
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=26.85 E-value=46 Score=29.32 Aligned_cols=26 Identities=31% Similarity=0.298 Sum_probs=20.7
Q ss_pred cCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 044823 18 QGHLIPMFDIARLLAQHGATATIVTTPV 45 (497)
Q Consensus 18 ~GHv~P~l~LA~~L~~rGh~Vt~~~~~~ 45 (497)
.|.+- ..+|++|+++|++|+++..+.
T Consensus 28 SG~mG--~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHLG--KIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCHHH--HHHHHHHHHTTCEEEEEECTT
T ss_pred CCHHH--HHHHHHHHHCCCEEEEEeCCc
Confidence 55443 568999999999999998773
No 211
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=26.75 E-value=2.9e+02 Score=25.31 Aligned_cols=111 Identities=7% Similarity=0.024 Sum_probs=58.0
Q ss_pred eEEEEeeCCcccCCHhhHHHHHHHHHhC-CCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCC
Q 044823 282 SVVYVCLGSICNLTSSQLIELGLGLEAS-KKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPA 360 (497)
Q Consensus 282 ~vv~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~ 360 (497)
.+.+|++|.+.. .++.++.+. +.+++.+...+... ...+.++. ++. .-+-...++|..++
T Consensus 7 ~igiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~~~--------~~~~~~~~---~~~-~~~~~~~~ll~~~~ 67 (330)
T 3e9m_A 7 RYGIMSTAQIVP-------RFVAGLRESAQAEVRGIASRRLEN--------AQKMAKEL---AIP-VAYGSYEELCKDET 67 (330)
T ss_dssp EEEECSCCTTHH-------HHHHHHHHSSSEEEEEEBCSSSHH--------HHHHHHHT---TCC-CCBSSHHHHHHCTT
T ss_pred EEEEECchHHHH-------HHHHHHHhCCCcEEEEEEeCCHHH--------HHHHHHHc---CCC-ceeCCHHHHhcCCC
Confidence 377888887762 355666654 45555555443211 11222221 111 12445567777554
Q ss_pred ccccccccC----chhHHHHHHhCCcEec-cCCcc--cchh-hHHHHHHHHcceeEeccc
Q 044823 361 VGGFLTHCG----WNSSLEGISAGVQMLT-WPLFT--DQFC-NEKLIVEVLRIGVSVGVE 412 (497)
Q Consensus 361 ~~~~ItHgG----~gs~~eal~~GvP~l~-~P~~~--DQ~~-na~~~~e~~G~G~~l~~~ 412 (497)
+.+++---- ..-+.+++.+|+++++ =|+.. ++-. ..+.+ ++.|+-+.+...
T Consensus 68 ~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a-~~~g~~~~v~~~ 126 (330)
T 3e9m_A 68 IDIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIA-QEQGVFLMEAQK 126 (330)
T ss_dssp CSEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHH-HHTTCCEEECCS
T ss_pred CCEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHH-HHcCCeEEEEEh
Confidence 443543222 2346788999999886 35544 3322 23333 577776666544
No 212
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=26.74 E-value=42 Score=31.81 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=26.5
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
+++|+|.|+-.+..| ..+|+.|+++||+|+++..
T Consensus 20 m~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr 53 (358)
T 4e21_A 20 FQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDL 53 (358)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred hcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 456899999877666 4678999999999998853
No 213
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=26.58 E-value=2.3e+02 Score=26.31 Aligned_cols=110 Identities=22% Similarity=0.151 Sum_probs=60.5
Q ss_pred eEEEEeeCCcccCCHhhHHHHHHHHHhC--CCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccC
Q 044823 282 SVVYVCLGSICNLTSSQLIELGLGLEAS--KKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHP 359 (497)
Q Consensus 282 ~vv~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~ 359 (497)
.+.+|.+|.+.. ..+.++.+. +.+++.....+... -+.+.++. ++ ..+-...++|..+
T Consensus 15 rvgiiG~G~~g~-------~~~~~l~~~~~~~~lvav~d~~~~~--------~~~~~~~~---~~--~~~~~~~~ll~~~ 74 (354)
T 3q2i_A 15 RFALVGCGRIAN-------NHFGALEKHADRAELIDVCDIDPAA--------LKAAVERT---GA--RGHASLTDMLAQT 74 (354)
T ss_dssp EEEEECCSTTHH-------HHHHHHHHTTTTEEEEEEECSSHHH--------HHHHHHHH---CC--EEESCHHHHHHHC
T ss_pred eEEEEcCcHHHH-------HHHHHHHhCCCCeEEEEEEcCCHHH--------HHHHHHHc---CC--ceeCCHHHHhcCC
Confidence 488899998763 345666655 55666665443211 11222221 23 2345567777754
Q ss_pred CccccccccC----chhHHHHHHhCCcEecc-CCccc--ch-hhHHHHHHHHcceeEeccc
Q 044823 360 AVGGFLTHCG----WNSSLEGISAGVQMLTW-PLFTD--QF-CNEKLIVEVLRIGVSVGVE 412 (497)
Q Consensus 360 ~~~~~ItHgG----~gs~~eal~~GvP~l~~-P~~~D--Q~-~na~~~~e~~G~G~~l~~~ 412 (497)
++.+++---- ..-+.+++.+|+++++= |+..+ +- ...+.+ ++.|+-+.+...
T Consensus 75 ~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a-~~~g~~~~v~~~ 134 (354)
T 3q2i_A 75 DADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAA-DKAKKHLFVVKQ 134 (354)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHH-HHHTCCEEECCG
T ss_pred CCCEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHH-HHhCCeEEEEEc
Confidence 4433442111 23567899999998873 66543 32 233344 577777766544
No 214
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=26.55 E-value=60 Score=28.81 Aligned_cols=34 Identities=15% Similarity=0.074 Sum_probs=29.7
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEE
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIV 41 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~ 41 (497)
+.|+|..-++-|-..=...||..|+++|++|.++
T Consensus 2 ~vI~vs~KGGvGKTT~a~nLA~~la~~G~~Vlli 35 (269)
T 1cp2_A 2 RQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVV 35 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEE
T ss_pred cEEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEE
Confidence 3566666778999999999999999999999998
No 215
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=26.31 E-value=61 Score=26.34 Aligned_cols=37 Identities=14% Similarity=0.216 Sum_probs=30.1
Q ss_pred CcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 044823 7 NFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVN 46 (497)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~ 46 (497)
..+++++..+. | +.|++.+++.|.++|.+|+++ ...+
T Consensus 23 ~~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 23 FGKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp CSEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CCeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 35788887776 3 999999999999999999998 5433
No 216
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=26.24 E-value=69 Score=27.70 Aligned_cols=30 Identities=13% Similarity=0.091 Sum_probs=26.6
Q ss_pred CCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 15 FLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 15 ~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
-++.|-..=...||..|+++|++|.++-..
T Consensus 11 kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (237)
T 1g3q_A 11 KGGTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 457899999999999999999999999654
No 217
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=26.21 E-value=52 Score=29.78 Aligned_cols=31 Identities=13% Similarity=0.079 Sum_probs=25.0
Q ss_pred cEEEEecC-CCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 8 FHFILLPF-LAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 8 ~~vl~~~~-p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
|+|.|+-. +..| ..+|+.|+++||+|+++..
T Consensus 12 m~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r 43 (286)
T 3c24_A 12 KTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEI 43 (286)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECC
T ss_pred CEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 68999977 7666 4578899999999997753
No 218
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=26.20 E-value=1.6e+02 Score=28.74 Aligned_cols=44 Identities=11% Similarity=0.189 Sum_probs=36.6
Q ss_pred CcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 044823 7 NFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARF 50 (497)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~ 50 (497)
+..|+++..++.|-..-...||..|+++|+.|.++.........
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~aa 143 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGA 143 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSSTHH
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcchhH
Confidence 45677777779999999999999999999999999877554433
No 219
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=26.16 E-value=57 Score=27.61 Aligned_cols=73 Identities=10% Similarity=0.038 Sum_probs=42.8
Q ss_pred hhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChh---hHHHHHHHHHHHHHHHH----HHh
Q 044823 393 FCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEE---RDGRRRRAKEFGELAKR----ALE 465 (497)
Q Consensus 393 ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~---~~~~~~~a~~~~~~~~~----~~~ 465 (497)
.+.+.-- +..|+|+.+ |+++|.++|.+.++..++ .++|+ |.-.+-..+|+ -++
T Consensus 102 id~~~Fe-~~cGVGV~V------------------T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWA 161 (187)
T 3tl4_X 102 STKMGMN-ENSGVGIEI------------------TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWA 161 (187)
T ss_dssp CCHHHHH-HTTTTTCCC------------------CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTS
T ss_pred CCHHHHH-HHCCCCeEe------------------CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCC
Confidence 3334444 688998865 778899999998853211 23455 55544444443 244
Q ss_pred hCCChHHHHHHHHHHHhhcc
Q 044823 466 EGGSSYNNIKFFHPRYHATA 485 (497)
Q Consensus 466 ~~g~~~~~~~~~~~~~~~~~ 485 (497)
++...-..++.-+-.+.+-.
T Consensus 162 d~~~vK~~vD~~~l~lLGPK 181 (187)
T 3tl4_X 162 DPRSFKPIIDQEVLKLLGPK 181 (187)
T ss_dssp CTTSHHHHHHHHHHHHHCSC
T ss_pred CHHHHHHHHHHHHHHHcCCc
Confidence 56666666665555555443
No 220
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=26.14 E-value=91 Score=27.39 Aligned_cols=40 Identities=18% Similarity=0.076 Sum_probs=26.4
Q ss_pred CCCCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 1 MASETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
|...++.++ ++++..+ |-+- ..+|+.|+++|++|.++.-.
T Consensus 1 m~~~~~~k~-vlITGas-ggiG--~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 1 MQNRLRSAL-ALVTGAG-SGIG--RAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp CCCCCTTCE-EEEETTT-SHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CccccCCCE-EEEECCC-ChHH--HHHHHHHHHCCCEEEEEeCC
Confidence 666655544 4455443 3232 57899999999999988643
No 221
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=25.98 E-value=69 Score=28.92 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=29.8
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEE
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIV 41 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~ 41 (497)
+.|+|..-++-|-..=...||..|+++|++|.++
T Consensus 3 kvIavs~KGGvGKTT~a~nLA~~La~~G~rVlli 36 (289)
T 2afh_E 3 RQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIV 36 (289)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred eEEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEE
Confidence 3566666678999999999999999999999998
No 222
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=25.88 E-value=98 Score=27.22 Aligned_cols=40 Identities=13% Similarity=-0.024 Sum_probs=27.5
Q ss_pred HHHHHHHhhcCCCCeEEEECCCCcc-------hHHHHHHcCCCeEEE
Q 044823 106 LPFENLFREQTPQPCCIISDMCIPW-------TVDTAAKFNVPRIIF 145 (497)
Q Consensus 106 ~~l~~~l~~~~~~~D~vI~D~~~~~-------a~~~A~~lgIP~i~~ 145 (497)
+.+.++++.+..+||++++|..-.. |.-+.-.+|+|+|.+
T Consensus 95 P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 141 (237)
T 3goc_A 95 PTVLAALDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGV 141 (237)
T ss_dssp HHHHHHHHTSSSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEeCceeecCCCcchhheeeeecCCCEEee
Confidence 3444455554568999999985432 445677778999986
No 223
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=25.85 E-value=47 Score=28.54 Aligned_cols=34 Identities=12% Similarity=0.087 Sum_probs=26.0
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
..++|.++-.+..| ..+|..|+++||+|+++...
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcCC
Confidence 46789998777666 56789999999999988543
No 224
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=25.76 E-value=1.3e+02 Score=24.92 Aligned_cols=39 Identities=10% Similarity=0.100 Sum_probs=31.0
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
++++||+++..+... ..-+....+.|...|++|+++++.
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 45 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLE 45 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecC
Confidence 456899999887654 456677788899999999999875
No 225
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=25.63 E-value=63 Score=30.73 Aligned_cols=38 Identities=8% Similarity=-0.054 Sum_probs=29.0
Q ss_pred CCcEEEEecCCCcC-C---HHHHHHHHHHH-HhCCCeEEEEeC
Q 044823 6 SNFHFILLPFLAQG-H---LIPMFDIARLL-AQHGATATIVTT 43 (497)
Q Consensus 6 ~~~~vl~~~~p~~G-H---v~P~l~LA~~L-~~rGh~Vt~~~~ 43 (497)
+++||+++..+..+ | +.....++++| .++||+|..+-.
T Consensus 2 ~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 2 TKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp -CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 36899999876444 3 34578899999 999999998853
No 226
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=25.54 E-value=29 Score=30.11 Aligned_cols=34 Identities=18% Similarity=0.142 Sum_probs=26.8
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
|++|||.|+-.+..| ..+|+.|+++||+|+++..
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANS 54 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECT
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 446799999877666 4688999999999998543
No 227
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=25.35 E-value=2.1e+02 Score=25.16 Aligned_cols=36 Identities=19% Similarity=0.219 Sum_probs=25.5
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
|.+.++++++..+.| + =..+|++|+++|++|.+...
T Consensus 23 m~~~k~vlITGas~g-I--G~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRG-I--GAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp -CCSCEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEcC
Confidence 344567777776532 2 36889999999999987743
No 228
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=25.35 E-value=71 Score=28.34 Aligned_cols=39 Identities=8% Similarity=0.084 Sum_probs=29.4
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAA 48 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~ 48 (497)
||||+..=-+. |---+..|+++|++.| +|+++.|....+
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~S 39 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQS 39 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCc
Confidence 46777766554 4455889999999988 899999886544
No 229
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=25.34 E-value=3.3e+02 Score=26.24 Aligned_cols=140 Identities=11% Similarity=0.029 Sum_probs=73.3
Q ss_pred eEEEEeeCCcccCCHhhHHHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCCc
Q 044823 282 SVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPAV 361 (497)
Q Consensus 282 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~ 361 (497)
+.|-|=+||.. +-...++....|+..|.++-..+.+-+. .|+.+.+ ++.+..--....+
T Consensus 266 ~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~saHR--------~p~~~~~-----------~~~~~~~~g~~~v 324 (425)
T 2h31_A 266 CRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTSAHK--------GPDETLR-----------IKAEYEGDGIPTV 324 (425)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--------CHHHHHH-----------HHHHHHTTCCCEE
T ss_pred CeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeeeccC--------CHHHHHH-----------HHHHHHHCCCCeE
Confidence 45667777766 5567778888889999987666655443 3432211 1111110000123
Q ss_pred cccccccCc----hhHHHHHHhCCcEeccCCcccchhhHHHHH-HH--HcceeEeccccccccccccccccccCHHHHHH
Q 044823 362 GGFLTHCGW----NSSLEGISAGVQMLTWPLFTDQFCNEKLIV-EV--LRIGVSVGVEVPMKFGEEEKIGVLVKKEDVET 434 (497)
Q Consensus 362 ~~~ItHgG~----gs~~eal~~GvP~l~~P~~~DQ~~na~~~~-e~--~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 434 (497)
+|.=+|. .++..++ .-+|+|.+|....-......+. =+ .|+.+..-.. ...+.-++.
T Consensus 325 --iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~vqmp~g~pvatv~~-------------~~nAa~~A~ 388 (425)
T 2h31_A 325 --FVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSSLRLPSGLGCSTVLS-------------PEGSAQFAA 388 (425)
T ss_dssp --EEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGTSSCCSSCCCEECCC-------------HHHHHHHHH
T ss_pred --EEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHHhcCCCCCceEEecC-------------chHHHHHHH
Confidence 6666554 3555444 5799999998532111122221 02 3333222111 245555665
Q ss_pred HHHHHhcCChhhHHHHHHHHHHHHHHHHH
Q 044823 435 AINILMDDGEERDGRRRRAKEFGELAKRA 463 (497)
Q Consensus 435 ai~~vl~~~~~~~~~~~~a~~~~~~~~~~ 463 (497)
.|.. +.|+ .++++.+..+..+...
T Consensus 389 ~Il~-~~~~----~l~~kl~~~~~~~~~~ 412 (425)
T 2h31_A 389 QIFG-LSNH----LVWSKLRASILNTWIS 412 (425)
T ss_dssp HHHH-TTCH----HHHHHHHHHHHHHHHH
T ss_pred HHHc-cCCH----HHHHHHHHHHHHHHHH
Confidence 5553 4566 6666666666665544
No 230
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=25.32 E-value=60 Score=29.52 Aligned_cols=37 Identities=5% Similarity=-0.088 Sum_probs=27.8
Q ss_pred cEEEEecCCCcCC---HHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 8 FHFILLPFLAQGH---LIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 8 ~~vl~~~~p~~GH---v~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
|||+++..+.... ......++++|.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 5899999874221 234467999999999999998654
No 231
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=25.15 E-value=4.3e+02 Score=28.10 Aligned_cols=81 Identities=12% Similarity=0.076 Sum_probs=46.9
Q ss_pred cccccCchhHHHHHHhC-Cc----EeccCCcccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHH
Q 044823 364 FLTHCGWNSSLEGISAG-VQ----MLTWPLFTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINI 438 (497)
Q Consensus 364 ~ItHgG~gs~~eal~~G-vP----~l~~P~~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~ 438 (497)
|+.||--+.+.|.++-. .| ++.+|-++.-..-...+. .. .++.+.|.+++.+
T Consensus 727 ~~~gGlgsaV~ell~~r~~~~~l~v~G~~d~G~tgtp~eLl~----------~~-------------gld~~~Iv~~a~~ 783 (845)
T 3ahc_A 727 FAYHSYAQDVRGLIYDRPNHDNFHVVGYKEQGSTTTPFDMVR----------VN-------------DMDRYALQAAALK 783 (845)
T ss_dssp EEESSCHHHHHHHTTTSTTGGGEEEECCCSCCCSCCHHHHHH----------TT-------------TCSHHHHHHHHHH
T ss_pred eeecCcHHHHHHHHHhCCCCceEEEEeccCCCCCCCHHHHHH----------Hh-------------CcCHHHHHHHHHH
Confidence 55676666777777665 33 445555443222333332 22 5899999999999
Q ss_pred HhcCChhhHHHHHHHHHHHHHHHHHHhhCC
Q 044823 439 LMDDGEERDGRRRRAKEFGELAKRALEEGG 468 (497)
Q Consensus 439 vl~~~~~~~~~~~~a~~~~~~~~~~~~~~g 468 (497)
++. ...+..+++..+......++...+-|
T Consensus 784 ~l~-~~~~~~~~~~~~~~~~~~~~~~~~~g 812 (845)
T 3ahc_A 784 LID-ADKYADKIDELNAFRKKAFQFAVDNG 812 (845)
T ss_dssp HHH-TTTTHHHHHHHHHHHHHHHHHHHHHS
T ss_pred Hcc-hhhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 886 44444555555555555555444433
No 232
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=25.13 E-value=28 Score=31.14 Aligned_cols=37 Identities=14% Similarity=0.216 Sum_probs=25.3
Q ss_pred CCCCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCe-EEEEe
Q 044823 1 MASETSNFHFILLPFLAQGHLIPMFDIARLLAQHGAT-ATIVT 42 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~-Vt~~~ 42 (497)
|....++|+|.++-.+..|. .+|+.|+++||+ |+++.
T Consensus 4 m~~~~~~m~i~iiG~G~mG~-----~~a~~l~~~g~~~v~~~~ 41 (266)
T 3d1l_A 4 MKRSIEDTPIVLIGAGNLAT-----NLAKALYRKGFRIVQVYS 41 (266)
T ss_dssp ---CGGGCCEEEECCSHHHH-----HHHHHHHHHTCCEEEEEC
T ss_pred hhcCCCCCeEEEEcCCHHHH-----HHHHHHHHCCCeEEEEEe
Confidence 45444568999997766663 468888889999 66664
No 233
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=25.13 E-value=2.3e+02 Score=24.40 Aligned_cols=103 Identities=8% Similarity=-0.093 Sum_probs=55.5
Q ss_pred hhhhhhhccCCCCeEEEEeeCCcccCCHhhHHHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeec
Q 044823 269 PECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRG 348 (497)
Q Consensus 269 ~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~ 348 (497)
.++-.+|..+. ...||-|... .......++....+-++|-++...... ++ ++. . ......+..
T Consensus 35 ~~lg~~LA~~G---~~vVsGGg~~----GiM~aa~~gAl~~GG~tiGVlP~~~~~---~e--~~~----~-~~~~~~~~~ 97 (215)
T 2a33_A 35 VDLGNELVSRN---IDLVYGGGSI----GLMGLVSQAVHDGGRHVIGIIPKTLMP---RE--LTG----E-TVGEVRAVA 97 (215)
T ss_dssp HHHHHHHHHTT---CEEEECCCSS----HHHHHHHHHHHHTTCCEEEEEESSCC------------------CCEEEEES
T ss_pred HHHHHHHHHCC---CEEEECCChh----hHhHHHHHHHHHcCCcEEEEcchHhcc---hh--hcc----C-CCCceeecC
Confidence 45556666553 4556655432 234455555555666666666433211 01 110 0 012234556
Q ss_pred ccch-HhhhccCCccccccccCchhHHHHHH---------hCCcEeccCC
Q 044823 349 WAPQ-VMILSHPAVGGFLTHCGWNSSLEGIS---------AGVQMLTWPL 388 (497)
Q Consensus 349 ~~pq-~~lL~~~~~~~~ItHgG~gs~~eal~---------~GvP~l~~P~ 388 (497)
..++ +.++..-+-.+++--||.||+-|... +++|++++-.
T Consensus 98 ~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 98 DMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp SHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred CHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 6665 33444333346778899999988762 4899998875
No 234
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=25.06 E-value=61 Score=24.98 Aligned_cols=37 Identities=11% Similarity=-0.104 Sum_probs=26.6
Q ss_pred cEEEEecCCCcCCH--HHHHHHHHHHHhCC--CeEEEEeCC
Q 044823 8 FHFILLPFLAQGHL--IPMFDIARLLAQHG--ATATIVTTP 44 (497)
Q Consensus 8 ~~vl~~~~p~~GHv--~P~l~LA~~L~~rG--h~Vt~~~~~ 44 (497)
+|++|+-+-..-.. +-.+.+|....++| |+|.++...
T Consensus 8 ~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G 48 (117)
T 2fb6_A 8 DKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWG 48 (117)
T ss_dssp SEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECS
T ss_pred CeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEEC
Confidence 67777666542222 34778899999999 899999765
No 235
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=25.02 E-value=78 Score=29.81 Aligned_cols=31 Identities=16% Similarity=0.236 Sum_probs=22.6
Q ss_pred cCCccccccc-cCchhHHHHHHhCCcEeccCCcc
Q 044823 358 HPAVGGFLTH-CGWNSSLEGISAGVQMLTWPLFT 390 (497)
Q Consensus 358 ~~~~~~~ItH-gG~gs~~eal~~GvP~l~~P~~~ 390 (497)
+|++ +|+| .++.+..-|-..|+|.+.+-...
T Consensus 114 ~PD~--Vv~~~~~~~~~~aa~~~giP~v~~~~~~ 145 (391)
T 3tsa_A 114 RPSV--LLVDVCALIGRVLGGLLDLPVVLHRWGV 145 (391)
T ss_dssp CCSE--EEEETTCHHHHHHHHHTTCCEEEECCSC
T ss_pred CCCE--EEeCcchhHHHHHHHHhCCCEEEEecCC
Confidence 6776 6666 56667777888999998875443
No 236
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=24.96 E-value=76 Score=28.22 Aligned_cols=39 Identities=10% Similarity=0.097 Sum_probs=29.4
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAA 48 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~ 48 (497)
||||+..=-+. |---+..|+++|++.| +|+++.|....+
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~S 39 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERS 39 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCT
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCc
Confidence 46777765554 4455889999999988 899999886554
No 237
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=24.90 E-value=74 Score=25.20 Aligned_cols=37 Identities=14% Similarity=0.233 Sum_probs=25.7
Q ss_pred cEEEEecCCCcCCHHHHHH-HHHHHHhCCCeEEEEeCC
Q 044823 8 FHFILLPFLAQGHLIPMFD-IARLLAQHGATATIVTTP 44 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~-LA~~L~~rGh~Vt~~~~~ 44 (497)
+||+++-....|+..-+.. |++.|.++|++|.++...
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 4666665556788765443 667777789999988654
No 238
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=24.85 E-value=94 Score=24.45 Aligned_cols=40 Identities=13% Similarity=0.301 Sum_probs=0.0
Q ss_pred HHHHHHHhhcCCCCeEEEECCCCc--chHHHHHHc-------CCCeEEEec
Q 044823 106 LPFENLFREQTPQPCCIISDMCIP--WTVDTAAKF-------NVPRIIFHG 147 (497)
Q Consensus 106 ~~l~~~l~~~~~~~D~vI~D~~~~--~a~~~A~~l-------gIP~i~~~~ 147 (497)
.+-.+.++. .+||+||.|...+ -|..+++.+ .+|.|.++.
T Consensus 47 ~~al~~~~~--~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa 95 (134)
T 3to5_A 47 LTALPMLKK--GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITA 95 (134)
T ss_dssp HHHHHHHHH--HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEES
T ss_pred HHHHHHHHh--CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEEC
No 239
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=24.83 E-value=70 Score=31.65 Aligned_cols=35 Identities=14% Similarity=-0.072 Sum_probs=29.8
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhC-CC-eEEEEeCC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQH-GA-TATIVTTP 44 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r-Gh-~Vt~~~~~ 44 (497)
++.|||.++-.+..| +.+|..|+++ || +|+++-..
T Consensus 16 ~~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~ 52 (478)
T 3g79_A 16 GPIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRN 52 (478)
T ss_dssp CSCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCC
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECC
Confidence 456899999999888 5789999999 99 99998544
No 240
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=24.75 E-value=38 Score=33.84 Aligned_cols=35 Identities=6% Similarity=0.086 Sum_probs=28.5
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
.+++||+++-.+.-| +.+|+.|.++|++||++...
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESS
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCC
Confidence 356799999877555 57899999999999999765
No 241
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=24.72 E-value=1e+02 Score=24.07 Aligned_cols=34 Identities=12% Similarity=0.086 Sum_probs=23.4
Q ss_pred CCcEEEEecCCCcCCHH--------HHHHHHHHHHhCCCeEE
Q 044823 6 SNFHFILLPFLAQGHLI--------PMFDIARLLAQHGATAT 39 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~--------P~l~LA~~L~~rGh~Vt 39 (497)
..|+.++++.|-.|... -+-+.|..|.++||-+.
T Consensus 6 ~~M~~IYIagPysg~~~n~~~~n~~~~~r~A~~l~~~G~ip~ 47 (125)
T 1t1j_A 6 GHMRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVF 47 (125)
T ss_dssp -CCCEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhhheeEECCCCCCcchHHHHHHHHHHHHHHHHHHCCCeee
Confidence 45678899999888742 34456666888999554
No 242
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=24.69 E-value=1.4e+02 Score=23.84 Aligned_cols=39 Identities=18% Similarity=0.252 Sum_probs=27.3
Q ss_pred CCcEEEEe-cCCCcCCHH--HHHHHHHHHHhCCCeE-EEEeCC
Q 044823 6 SNFHFILL-PFLAQGHLI--PMFDIARLLAQHGATA-TIVTTP 44 (497)
Q Consensus 6 ~~~~vl~~-~~p~~GHv~--P~l~LA~~L~~rGh~V-t~~~~~ 44 (497)
..||++|+ +.+.+|+-. -.+.+|.++.+.||+| .++-..
T Consensus 11 ~~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~ 53 (140)
T 2d1p_A 11 GSMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYR 53 (140)
T ss_dssp CCCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred CceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEec
Confidence 34555554 444566544 4578899999999999 888665
No 243
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=24.45 E-value=1.3e+02 Score=23.57 Aligned_cols=39 Identities=18% Similarity=0.304 Sum_probs=27.3
Q ss_pred CCCCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 1 MASETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
|+..+++++|+++- .+-.-.-.|.+.|...|++|..+..
T Consensus 1 Ms~~~~~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (154)
T 2rjn_A 1 MSLNYKNYTVMLVD----DEQPILNSLKRLIKRLGCNIITFTS 39 (154)
T ss_dssp ---CCSCCEEEEEC----SCHHHHHHHHHHHHTTTCEEEEESC
T ss_pred CCCCCCCCeEEEEc----CCHHHHHHHHHHHHHcCCeEEEeCC
Confidence 77777888999885 4556667788888888999885543
No 244
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=24.38 E-value=96 Score=28.86 Aligned_cols=72 Identities=10% Similarity=0.051 Sum_probs=44.2
Q ss_pred CHhhHHHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCCccccccccCchhHH
Q 044823 295 TSSQLIELGLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPAVGGFLTHCGWNSSL 374 (497)
Q Consensus 295 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~ItHgG~gs~~ 374 (497)
+.+..+.+.++|.+...+.||...++.... .+.++++...+-.+|.. ||=+.-..+++
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~~--------------------rlL~~LD~~~i~~~PK~--~~GySDiT~L~ 120 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGGFNSN--------------------QLLPYLDYDLISENPKI--LCGFSDITALA 120 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSCGG--------------------GGGGGCCHHHHHHSCCE--EEECTTHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCchhHH--------------------HHhhhcchhhhccCCeE--EEecccccHHH
Confidence 456677889999999999999987775322 33355555555555554 66555555555
Q ss_pred HHHH--hCCcEeccCC
Q 044823 375 EGIS--AGVQMLTWPL 388 (497)
Q Consensus 375 eal~--~GvP~l~~P~ 388 (497)
-+++ .|+..+.=|+
T Consensus 121 ~al~~~~g~~t~hGp~ 136 (327)
T 4h1h_A 121 TAIYTQTELITYSGAH 136 (327)
T ss_dssp HHHHHHHCBCEEECCC
T ss_pred HHHHHhcCeEEEeCcc
Confidence 5553 2444444343
No 245
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=24.36 E-value=80 Score=28.77 Aligned_cols=33 Identities=12% Similarity=0.184 Sum_probs=23.1
Q ss_pred EEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 044823 9 HFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPV 45 (497)
Q Consensus 9 ~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~ 45 (497)
+|+++ ++.|.+- ..|+++|.++||+|+.++-..
T Consensus 13 ~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIF--GGTGYIG--NHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECTT
T ss_pred eEEEE--CCCchHH--HHHHHHHHHCCCcEEEEECCC
Confidence 55554 4445553 467899999999999887543
No 246
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=24.31 E-value=1.1e+02 Score=28.70 Aligned_cols=53 Identities=8% Similarity=-0.123 Sum_probs=31.6
Q ss_pred hhhhhhhhccCCCCeEEEEeeCCcccCCHhhHHHHHHHHHhCCCCeEEEEeCC
Q 044823 268 IPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVSRVG 320 (497)
Q Consensus 268 ~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 320 (497)
.+++...++..+-+.+.+-+.-.....+...+..+.+++++.+..+..-.+..
T Consensus 144 ~~El~r~~~~~G~~Gv~l~~~~~~~~~~d~~~~p~~~~~~e~g~pV~iH~g~~ 196 (357)
T 3nur_A 144 AREFERCINDLGFKGALIMGRAQDGFLDQDKYDIIFKTAENLDVPIYLHPAPV 196 (357)
T ss_dssp HHHHHHHHHTTCCCCEEEESCBTTBCTTSGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred HHHHHHHHhhcCceEEEeCCCCCCCCCCCccHHHHHHHHHhcCCeEEEecCCC
Confidence 35666666544333343332111122455678889999999999987766553
No 247
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=24.03 E-value=26 Score=30.28 Aligned_cols=32 Identities=13% Similarity=0.183 Sum_probs=23.6
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
|||+++-.+.. -..+|+.|.++||+|+++...
T Consensus 1 M~iiIiG~G~~-----G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGGETT-----AYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECCHHH-----HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCCHH-----HHHHHHHHHhCCCeEEEEECC
Confidence 46777754333 347899999999999999753
No 248
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=23.99 E-value=3.2e+02 Score=22.84 Aligned_cols=144 Identities=11% Similarity=0.093 Sum_probs=79.0
Q ss_pred EEEEeeCCcccCCHhhHHHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCCcc
Q 044823 283 VVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPAVG 362 (497)
Q Consensus 283 vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~ 362 (497)
.|-|=+||.. +-...++....|+.++.++-..+-+-+. .|+.+.+ |+.+.. .-.++
T Consensus 23 ~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR--------~p~~l~~-----------~~~~a~---~~g~~ 78 (182)
T 1u11_A 23 VVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSAHR--------TPDRLAD-----------YARTAA---ERGLN 78 (182)
T ss_dssp SEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--------CHHHHHH-----------HHHHTT---TTTCC
T ss_pred EEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEcccC--------CHHHHHH-----------HHHHHH---hCCCc
Confidence 3666677766 5567778888899999987666655543 3432211 111100 00122
Q ss_pred ccccccCc----hhHHHHHHhCCcEeccCCccc--chhhHH-HHHHH--HcceeEe-ccccccccccccccccccCHHHH
Q 044823 363 GFLTHCGW----NSSLEGISAGVQMLTWPLFTD--QFCNEK-LIVEV--LRIGVSV-GVEVPMKFGEEEKIGVLVKKEDV 432 (497)
Q Consensus 363 ~~ItHgG~----gs~~eal~~GvP~l~~P~~~D--Q~~na~-~~~e~--~G~G~~l-~~~~~~~~~~~~~~~~~~~~~~l 432 (497)
+||.=.|. .++.-++ .-+|+|.+|.... ....+. -+. + .|+.+.. ..+ +.+..++.-+
T Consensus 79 ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSiv-qmP~GvpVatV~I~----------~a~~~nAall 146 (182)
T 1u11_A 79 VIIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIV-QMPGGVPVGTLAIG----------ASGAKNAALL 146 (182)
T ss_dssp EEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHH-CCCTTSCCEECCSS----------HHHHHHHHHH
T ss_pred EEEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCceEEEecC----------CccchHHHHH
Confidence 26666654 3444444 5799999998653 111211 122 4 4555221 111 0012455556
Q ss_pred HHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhC
Q 044823 433 ETAINILMDDGEERDGRRRRAKEFGELAKRALEEG 467 (497)
Q Consensus 433 ~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~ 467 (497)
...|.. +.|+ .++++.+.+++.+++.+.+.
T Consensus 147 AaqIla-~~d~----~l~~kL~~~r~~~~~~v~~~ 176 (182)
T 1u11_A 147 AASILA-LYNP----ALAARLETWRALQTASVPNS 176 (182)
T ss_dssp HHHHHG-GGCH----HHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHc-cCCH----HHHHHHHHHHHHHHHHHHHh
Confidence 655553 4566 88999999998888764443
No 249
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=23.92 E-value=1.1e+02 Score=24.40 Aligned_cols=96 Identities=14% Similarity=0.104 Sum_probs=55.8
Q ss_pred EEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCCCCCCCCCc
Q 044823 11 ILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGCENFDMLPS 90 (497)
Q Consensus 11 l~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~ 90 (497)
+|++.. ..+=.-++.+|+.|.+.|+++ +++..+...+++. ++....+.. ..++- .
T Consensus 27 vliSv~-d~dK~~l~~~a~~l~~lGf~i--~AT~GTa~~L~~~---------Gi~v~~v~k------~~egg--~----- 81 (143)
T 2yvq_A 27 ILIGIQ-QSFRPRFLGVAEQLHNEGFKL--FATEATSDWLNAN---------NVPATPVAW------PSQEG--Q----- 81 (143)
T ss_dssp EEEECC-GGGHHHHHHHHHHHHTTTCEE--EEEHHHHHHHHHT---------TCCCEEECC------GGGC---------
T ss_pred EEEEec-ccchHHHHHHHHHHHHCCCEE--EECchHHHHHHHc---------CCeEEEEEe------ccCCC--c-----
Confidence 444443 245677899999999999974 4444444434332 555555421 11110 0
Q ss_pred hhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCC--------cchHHHHHHcCCCeEE
Q 044823 91 IDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCI--------PWTVDTAAKFNVPRII 144 (497)
Q Consensus 91 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~--------~~a~~~A~~lgIP~i~ 144 (497)
....+.+.+.+++ .+.|+||.-+-- +.....|-.+|||+++
T Consensus 82 -----------~~~~~~i~d~i~~--g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 82 -----------NPSLSSIRKLIRD--GSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp --------------CBCHHHHHHT--TSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred -----------ccccccHHHHHHC--CCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEc
Confidence 0001346677777 899999975432 1234568889999886
No 250
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=23.85 E-value=24 Score=32.40 Aligned_cols=35 Identities=14% Similarity=0.071 Sum_probs=27.9
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
+.+.+|+++-.+..| +..|..|+++|++|+++-..
T Consensus 5 ~~~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~ 39 (332)
T 3lzw_A 5 TKVYDITIIGGGPVG-----LFTAFYGGMRQASVKIIESL 39 (332)
T ss_dssp EEEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CccceEEEECCCHHH-----HHHHHHHHHCCCCEEEEEcC
Confidence 345688888877655 68888999999999999664
No 251
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=23.77 E-value=81 Score=26.96 Aligned_cols=33 Identities=6% Similarity=0.063 Sum_probs=27.8
Q ss_pred EEEecC-CCcCCHHHHHHHHHHHHhCCCeEEEEe
Q 044823 10 FILLPF-LAQGHLIPMFDIARLLAQHGATATIVT 42 (497)
Q Consensus 10 vl~~~~-p~~GHv~P~l~LA~~L~~rGh~Vt~~~ 42 (497)
|++... ++-|-..-.+.||..|+++|++|.++=
T Consensus 4 I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~d 37 (224)
T 1byi_A 4 YFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEc
Confidence 444443 689999999999999999999999973
No 252
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=23.74 E-value=2.4e+02 Score=23.62 Aligned_cols=123 Identities=12% Similarity=0.106 Sum_probs=0.0
Q ss_pred CcccCCHhhHHHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCCccccccccC
Q 044823 290 SICNLTSSQLIELGLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPAVGGFLTHCG 369 (497)
Q Consensus 290 S~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~ItHgG 369 (497)
......++.+.++++..+..+.+++++..+.... ||. .+....+.--+=--...+ +-+|
T Consensus 48 ~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~-------Lpg-----------vvA~~t~~PVIgVP~~~~---~l~G 106 (183)
T 1o4v_A 48 VSAHRTPDRMFEYAKNAEERGIEVIIAGAGGAAH-------LPG-----------MVASITHLPVIGVPVKTS---TLNG 106 (183)
T ss_dssp CCTTTCHHHHHHHHHHTTTTTCCEEEEEEESSCC-------HHH-----------HHHHHCSSCEEEEEECCT---TTTT
T ss_pred EcccCCHHHHHHHHHHHHhCCCcEEEEecCcccc-------cHH-----------HHHhccCCCEEEeeCCCC---CCCc
Q ss_pred chhHHHHHHh--CCcEeccCCcccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhH
Q 044823 370 WNSSLEGISA--GVQMLTWPLFTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERD 447 (497)
Q Consensus 370 ~gs~~eal~~--GvP~l~~P~~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~ 447 (497)
+.+++..+.. |+| +--+.-|-..||..++ .... .....+|.+.+++--.
T Consensus 107 ~dsLlSivqmP~Gvp--VatV~Id~~~nAa~lA--------aqIl-------------a~~d~~l~~kL~~~r~------ 157 (183)
T 1o4v_A 107 LDSLFSIVQMPGGVP--VATVAINNAKNAGILA--------ASIL-------------GIKYPEIARKVKEYKE------ 157 (183)
T ss_dssp HHHHHHHHTCCTTCC--CEECCTTCHHHHHHHH--------HHHH-------------HTTCHHHHHHHHHHHH------
T ss_pred HHHHHHHhcCCCCCe--eEEEecCCchHHHHHH--------HHHH-------------hcCCHHHHHHHHHHHH------
Q ss_pred HHHHHHHHHHHHHHH
Q 044823 448 GRRRRAKEFGELAKR 462 (497)
Q Consensus 448 ~~~~~a~~~~~~~~~ 462 (497)
..++...+-.+.++.
T Consensus 158 ~~~~~v~~~~~~l~~ 172 (183)
T 1o4v_A 158 RMKREVLEKAQRLEQ 172 (183)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
No 253
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=23.69 E-value=64 Score=26.68 Aligned_cols=38 Identities=21% Similarity=0.301 Sum_probs=30.0
Q ss_pred cEEEEecCCC---cCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 044823 8 FHFILLPFLA---QGHLIPMFDIARLLAQHGATATIVTTPV 45 (497)
Q Consensus 8 ~~vl~~~~p~---~GHv~P~l~LA~~L~~rGh~Vt~~~~~~ 45 (497)
.+|+++|.-+ .-=..+.-.|++.|.++|.+|.|..+|.
T Consensus 31 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 31 HSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp SEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 4677776553 1235688999999999999999999983
No 254
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=23.68 E-value=1.2e+02 Score=25.71 Aligned_cols=102 Identities=8% Similarity=-0.091 Sum_probs=55.4
Q ss_pred hhhhhhhccCCCCeEEEEeeCCcccCCHhhHHHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeec
Q 044823 269 PECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRG 348 (497)
Q Consensus 269 ~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~ 348 (497)
.++-++|..+. ..+|+-|... .......++....+-+++=......... + .+.. .-+..++++
T Consensus 34 ~~lg~~la~~g---~~lv~GGG~~----GlM~a~~~ga~~~GG~viGv~p~~l~~~---e--~~~~-----~~~~~i~~~ 96 (189)
T 3sbx_A 34 GAVGAAIAARG---WTLVWGGGHV----SAMGAVSSAARAHGGWTVGVIPKMLVHR---E--LADH-----DADELVVTE 96 (189)
T ss_dssp HHHHHHHHHTT---CEEEECCBCS----HHHHHHHHHHHTTTCCEEEEEETTTTTT---T--TBCT-----TCSEEEEES
T ss_pred HHHHHHHHHCC---CEEEECCCcc----CHHHHHHHHHHHcCCcEEEEcCchhhhc---c--cCCC-----CCCeeEEcC
Confidence 45556776554 3445554322 3556666666677777776654421100 0 1100 012334445
Q ss_pred ccch-Hh-hhccCCccccccccCchhHHHHH---------HhCCcEeccCC
Q 044823 349 WAPQ-VM-ILSHPAVGGFLTHCGWNSSLEGI---------SAGVQMLTWPL 388 (497)
Q Consensus 349 ~~pq-~~-lL~~~~~~~~ItHgG~gs~~eal---------~~GvP~l~~P~ 388 (497)
+... .. ...+++ ..++--||+||+-|.. .+++|++++-.
T Consensus 97 ~~~~Rk~~m~~~sd-a~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~ 146 (189)
T 3sbx_A 97 TMWERKQVMEDRAN-AFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDP 146 (189)
T ss_dssp SHHHHHHHHHHHCS-EEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred CHHHHHHHHHHHCC-EEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecC
Confidence 5554 33 334455 3567778899998875 36899998853
No 255
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=23.67 E-value=99 Score=26.73 Aligned_cols=40 Identities=23% Similarity=0.165 Sum_probs=24.9
Q ss_pred CCCCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 1 MASETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
|...++.+++++ +. +.|.+- ..++++|+++|++|.++.-.
T Consensus 1 m~~~~~~~~vlV-TG-asggiG--~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 1 MKLNFSGLRALV-TG-AGKGIG--RDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp --CCCTTCEEEE-ES-TTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CccCCCCCEEEE-eC-CCchHH--HHHHHHHHHCCCEEEEEeCC
Confidence 444455555544 33 334333 47899999999999887643
No 256
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=23.67 E-value=53 Score=30.77 Aligned_cols=37 Identities=14% Similarity=0.119 Sum_probs=25.1
Q ss_pred CCCCcEEEEecCCCcCCHHHHHHHHHHHHh--CCCeEEEEeCC
Q 044823 4 ETSNFHFILLPFLAQGHLIPMFDIARLLAQ--HGATATIVTTP 44 (497)
Q Consensus 4 ~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~--rGh~Vt~~~~~ 44 (497)
.+++++|++. ++.|-+- ..|+++|.+ +||+|+.+.-.
T Consensus 7 ~~~~~~vlVT--GatG~IG--~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 7 ELENQTILIT--GGAGFVG--SNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp CCTTCEEEEE--TTTSHHH--HHHHHHHHHHCTTSEEEEEECC
T ss_pred hcCCCEEEEE--CCCCHHH--HHHHHHHHhhCCCCeEEEEECC
Confidence 3456677665 2334333 468899999 99999998653
No 257
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=23.59 E-value=67 Score=25.58 Aligned_cols=114 Identities=11% Similarity=0.125 Sum_probs=62.3
Q ss_pred CcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhh--hHHHHHHhhhcCCCeEEEEecCCccccCCCCCCCC
Q 044823 7 NFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAAR--FKTVLARALQCRLQIRLIEIQFPWQEAGLPEGCEN 84 (497)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~ 84 (497)
..+++++..++ =+.|++.+++.|.++|.+|+++ ...+.+. +.+.++.. ...+.+..+.. .+.. .
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R~~~~~~~~~el~~l---~~~~~~~~~~~------~~~~--~ 83 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVTFEPMVILKEELEKA---VTRHIVEPVPL------NPNQ--D 83 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEEEGGGCCSHHHHHTT---SSEEEEEEECC------CTTS--C
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeCCHHHhhHHHHHHHH---HhheEEEEeec------cccc--C
Confidence 35788887775 4899999999999999999998 5433322 34444432 11233322210 0000 0
Q ss_pred CCCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCe-EEEECC--CCcchHHHHHHcCCCeEE
Q 044823 85 FDMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPC-CIISDM--CIPWTVDTAAKFNVPRII 144 (497)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D-~vI~D~--~~~~a~~~A~~lgIP~i~ 144 (497)
..+. .........+.+.+.+.. .+.| +.+|-+ +.-.....++.+|||..-
T Consensus 84 -----~~d~---~~g~~G~v~~~l~~~~~~--~~~~~vy~CGP~~Mm~av~~~l~~~~~~~~~ 136 (142)
T 3lyu_A 84 -----FLAN---MKNVSQRLKEKVRELLES--EDWDLVFMVGPVGDQKQVFEVVKEYGVPMLE 136 (142)
T ss_dssp -----HHHH---HHHHHHHHHHHHHHHHHS--SCCSEEEEESCHHHHHHHHHHHHHHTCCBC-
T ss_pred -----CCCC---CCCCccchhHHHHHhccc--CCCCEEEEECCHHHHHHHHHHHHHcCCchhh
Confidence 0010 000111122345555555 4555 567877 334667788899999653
No 258
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=23.56 E-value=99 Score=26.05 Aligned_cols=38 Identities=16% Similarity=0.006 Sum_probs=29.5
Q ss_pred CcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 7 NFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
+..++++.++..|+-.-+..+++.|+++|+.|..+-.+
T Consensus 27 ~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 64 (236)
T 1zi8_A 27 PAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLY 64 (236)
T ss_dssp SEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGG
T ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEecccc
Confidence 34566666777788888999999999999998777543
No 259
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=23.53 E-value=2.2e+02 Score=26.13 Aligned_cols=26 Identities=12% Similarity=0.019 Sum_probs=20.7
Q ss_pred CCHhhHHHHHHHHHhCCCCeEEEEeC
Q 044823 294 LTSSQLIELGLGLEASKKPFIWVSRV 319 (497)
Q Consensus 294 ~~~~~~~~~~~al~~~~~~~i~~~~~ 319 (497)
.+...+..+.+.+++.+..+++-.+.
T Consensus 155 l~d~~~~p~~~~~~e~~lpv~iH~~~ 180 (334)
T 2hbv_A 155 LDDATLEAFLTHCANEDIPILVHPWD 180 (334)
T ss_dssp TTSHHHHHHHHHHHHTTCCEEEECCS
T ss_pred CCcHHHHHHHHHHHHCCCEEEECCCC
Confidence 45577888999999999998877654
No 260
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=23.52 E-value=51 Score=31.15 Aligned_cols=34 Identities=15% Similarity=-0.031 Sum_probs=26.5
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
|+.++|+++-.+.-| +.+|..|+++|++|+++-.
T Consensus 9 m~~~dVvIVGaG~aG-----l~~A~~L~~~G~~v~viE~ 42 (379)
T 3alj_A 9 GKTRRAEVAGGGFAG-----LTAAIALKQNGWDVRLHEK 42 (379)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCCeEEEECCCHHH-----HHHHHHHHHCCCCEEEEec
Confidence 445789988877655 7889999999999999943
No 261
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=23.22 E-value=39 Score=26.39 Aligned_cols=34 Identities=21% Similarity=0.201 Sum_probs=24.1
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
++.+|+++-.+..| ..+++.|.++|++|+++...
T Consensus 5 ~~~~v~I~G~G~iG-----~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 5 KNKQFAVIGLGRFG-----GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp -CCSEEEECCSHHH-----HHHHHHHHHTTCCCEEEESC
T ss_pred cCCcEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 34578877654333 46789999999999988653
No 262
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=23.14 E-value=3.4e+02 Score=24.07 Aligned_cols=33 Identities=24% Similarity=0.217 Sum_probs=24.5
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
.|+++++.++.| + =..+|+.|+++|++|.++..
T Consensus 29 ~k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 29 RPVAIVTGGRRG-I--GLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEecCCCH-H--HHHHHHHHHHCCCeEEEEeC
Confidence 367777776543 2 25789999999999998863
No 263
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=23.08 E-value=1.2e+02 Score=22.96 Aligned_cols=39 Identities=10% Similarity=0.060 Sum_probs=25.6
Q ss_pred CCCCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 1 MASETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
|+.+.++++|+++- .+-.-.-.|.+.|.+.|++|..+..
T Consensus 1 Ms~~~~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (136)
T 3hdv_A 1 MSLVAARPLVLVVD----DNAVNREALILYLKSRGIDAVGADG 39 (136)
T ss_dssp ------CCEEEEEC----SCHHHHHHHHHHHHHTTCCEEEESS
T ss_pred CCCCCCCCeEEEEC----CCHHHHHHHHHHHHHcCceEEEeCC
Confidence 67666778898886 4556667788888889999887644
No 264
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=23.03 E-value=1.1e+02 Score=25.87 Aligned_cols=38 Identities=11% Similarity=-0.092 Sum_probs=27.3
Q ss_pred CCcEEEEecCCCcCCH----HHHHHHHHHHHhCCCeEEEEeCC
Q 044823 6 SNFHFILLPFLAQGHL----IPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv----~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
.+++|.+++... +.- .-...|++.|+++|+.|..-..+
T Consensus 12 ~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG~ 53 (189)
T 3sbx_A 12 GRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGGH 53 (189)
T ss_dssp -CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBC
T ss_pred CCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 458999998766 543 44577888889999987776544
No 265
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=23.02 E-value=90 Score=27.86 Aligned_cols=39 Identities=15% Similarity=0.165 Sum_probs=30.4
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAA 48 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~ 48 (497)
||||+..=-+. |---+..|+++|++.| +|+++.|....+
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~S 40 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRS 40 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCT
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCc
Confidence 67888776665 5556888999998876 999999886554
No 266
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=23.01 E-value=1.9e+02 Score=25.29 Aligned_cols=39 Identities=15% Similarity=0.008 Sum_probs=24.6
Q ss_pred CCCCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 1 MASETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
|....+ .|+++++..+.| + =..+|+.|+++|++|.++.-
T Consensus 1 M~~~~~-~k~vlVTGas~G-I--G~aia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 1 MSLTPR-NATVAVIGAGDY-I--GAEIAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp ----CC-SCEEEEECCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCcCCC-CCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEeC
Confidence 544333 356666666532 2 35889999999999998864
No 267
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=23.01 E-value=1.2e+02 Score=27.18 Aligned_cols=39 Identities=23% Similarity=0.182 Sum_probs=31.4
Q ss_pred CCcEEEEecC--CCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 6 SNFHFILLPF--LAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 6 ~~~~vl~~~~--p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
+++++++++. |+.|-..-...||..|+++|..|.++-..
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3456665554 58899999999999999999999998544
No 268
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=23.00 E-value=89 Score=28.37 Aligned_cols=39 Identities=8% Similarity=0.033 Sum_probs=29.6
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAA 48 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~ 48 (497)
||||+..=-+. +---+..|+++|++.| +|+++.|....+
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qS 39 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKS 39 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTT
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCc
Confidence 46777766554 4455889999999988 999999886554
No 269
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=23.00 E-value=2.7e+02 Score=25.59 Aligned_cols=110 Identities=12% Similarity=0.120 Sum_probs=58.8
Q ss_pred eEEEEeeCCcccCCHhhHHHHHHHHHhC-CCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCC
Q 044823 282 SVVYVCLGSICNLTSSQLIELGLGLEAS-KKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPA 360 (497)
Q Consensus 282 ~vv~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~ 360 (497)
.+.+|.+|.+.. ..+.++.+. +.+++.+...+... -..+.++ -++ .-+-...+++..++
T Consensus 6 rvgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~~~--------~~~~a~~---~g~--~~~~~~~~~l~~~~ 65 (344)
T 3euw_A 6 RIALFGAGRIGH-------VHAANIAANPDLELVVIADPFIEG--------AQRLAEA---NGA--EAVASPDEVFARDD 65 (344)
T ss_dssp EEEEECCSHHHH-------HHHHHHHHCTTEEEEEEECSSHHH--------HHHHHHT---TTC--EEESSHHHHTTCSC
T ss_pred EEEEECCcHHHH-------HHHHHHHhCCCcEEEEEECCCHHH--------HHHHHHH---cCC--ceeCCHHHHhcCCC
Confidence 377888887652 345566654 55666555443211 1112221 122 22445667787554
Q ss_pred ccccccccC----chhHHHHHHhCCcEecc-CCcc--cchh-hHHHHHHHHcceeEeccc
Q 044823 361 VGGFLTHCG----WNSSLEGISAGVQMLTW-PLFT--DQFC-NEKLIVEVLRIGVSVGVE 412 (497)
Q Consensus 361 ~~~~ItHgG----~gs~~eal~~GvP~l~~-P~~~--DQ~~-na~~~~e~~G~G~~l~~~ 412 (497)
+.+++---- .--+.+++.+|+++++= |+.. ++-. ....+ ++.|+-+.+...
T Consensus 66 ~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a-~~~g~~~~v~~~ 124 (344)
T 3euw_A 66 IDGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKI-GDGASKVMLGFN 124 (344)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHH-GGGGGGEEECCG
T ss_pred CCEEEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHH-HhcCCeEEecch
Confidence 444553322 23467899999998873 6554 3322 33334 577776666544
No 270
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=22.59 E-value=59 Score=28.66 Aligned_cols=35 Identities=26% Similarity=0.189 Sum_probs=26.8
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
...++|.|+-.+..| ..||+.|+++||+|+++...
T Consensus 17 ~~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred cCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 456899999777666 35789999999999988644
No 271
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=22.57 E-value=1.3e+02 Score=22.34 Aligned_cols=33 Identities=18% Similarity=0.295 Sum_probs=23.0
Q ss_pred CCCeEEEECCCCc--chHHHHHHc-------CCCeEEEechh
Q 044823 117 PQPCCIISDMCIP--WTVDTAAKF-------NVPRIIFHGFS 149 (497)
Q Consensus 117 ~~~D~vI~D~~~~--~a~~~A~~l-------gIP~i~~~~~~ 149 (497)
.+||+||.|...+ .+..+.+.+ ++|.+.++...
T Consensus 45 ~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 45 FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 6899999997553 455555543 58888876543
No 272
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=22.55 E-value=1.4e+02 Score=26.24 Aligned_cols=40 Identities=23% Similarity=0.111 Sum_probs=25.5
Q ss_pred CCCCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 1 MASETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
|+.+++.+ +++++..+ |-+ =..+|+.|+++|++|.++.-.
T Consensus 1 M~~m~~~k-~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 1 MAHMVNGK-VALVTGAA-QGI--GRAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp -CCCCTTC-EEEEETTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCcccCCC-EEEEECCC-CcH--HHHHHHHHHHCCCEEEEEECC
Confidence 66655444 45555544 322 257899999999999987643
No 273
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=22.53 E-value=72 Score=26.60 Aligned_cols=33 Identities=15% Similarity=0.123 Sum_probs=23.6
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
|+|+++ ++.|-+- ..|+++|.++||+|+.+.-.
T Consensus 4 ~~ilVt--GatG~iG--~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIF--GATGQTG--LTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEE--STTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE--cCCcHHH--HHHHHHHHHCCCeEEEEEeC
Confidence 566655 4445443 57889999999999998754
No 274
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=22.41 E-value=1e+02 Score=28.22 Aligned_cols=34 Identities=3% Similarity=0.092 Sum_probs=25.6
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhC-C-CeEEEEeCC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQH-G-ATATIVTTP 44 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~r-G-h~Vt~~~~~ 44 (497)
|.+|+|+++..+.. ++|++.|++. | ++|..+...
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 35689999866654 4799999886 7 888887554
No 275
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=22.40 E-value=31 Score=31.26 Aligned_cols=28 Identities=11% Similarity=0.215 Sum_probs=23.8
Q ss_pred CCccccccccCchhHHHHHHh------CCcEeccCC
Q 044823 359 PAVGGFLTHCGWNSSLEGISA------GVQMLTWPL 388 (497)
Q Consensus 359 ~~~~~~ItHgG~gs~~eal~~------GvP~l~~P~ 388 (497)
+++ +|.=||=||+.+++.. ++|++.+|.
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 455 9999999999999765 889999876
No 276
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=22.37 E-value=82 Score=25.83 Aligned_cols=27 Identities=22% Similarity=0.170 Sum_probs=20.8
Q ss_pred EEEEeeCCcccCCHhhHHHHHHHHHhC
Q 044823 283 VVYVCLGSICNLTSSQLIELGLGLEAS 309 (497)
Q Consensus 283 vv~vs~GS~~~~~~~~~~~~~~al~~~ 309 (497)
+.|+|+||....+...+...++.|.+.
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~ 28 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDI 28 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTS
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcC
Confidence 679999999865666677777777764
No 277
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=22.31 E-value=1.2e+02 Score=23.71 Aligned_cols=39 Identities=10% Similarity=0.146 Sum_probs=25.3
Q ss_pred CCCCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 1 MASETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
|....++++|+++- .+-.-.-.|.+.|.+.|++|..+..
T Consensus 1 M~~~~~~~~ILivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (154)
T 3gt7_A 1 MSLSNRAGEILIVE----DSPTQAEHLKHILEETGYQTEHVRN 39 (154)
T ss_dssp ------CCEEEEEC----SCHHHHHHHHHHHHTTTCEEEEESS
T ss_pred CCcccCCCcEEEEe----CCHHHHHHHHHHHHHCCCEEEEeCC
Confidence 66666788999874 4666677788888888999876643
No 278
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=22.17 E-value=76 Score=28.38 Aligned_cols=38 Identities=18% Similarity=0.227 Sum_probs=31.9
Q ss_pred CCcEEEEecCC---CcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 6 SNFHFILLPFL---AQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 6 ~~~~vl~~~~p---~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
.+||.+|++.+ +.|-=.-.-.|+..|.+||+.|+..--
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~Ki 61 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKI 61 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEE
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEec
Confidence 45799999987 566677889999999999999998754
No 279
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=22.15 E-value=1.1e+02 Score=25.98 Aligned_cols=39 Identities=13% Similarity=0.163 Sum_probs=27.2
Q ss_pred CCcEEEEecCCCcCCHHHHHH-HHHHHHhCCCeEEEEeCC
Q 044823 6 SNFHFILLPFLAQGHLIPMFD-IARLLAQHGATATIVTTP 44 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~-LA~~L~~rGh~Vt~~~~~ 44 (497)
++|||+++.....|+..-+.. +++.|.+.|++|.++-..
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 44 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVR 44 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 567888877766787665554 456666679998887654
No 280
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=22.14 E-value=1.1e+02 Score=26.69 Aligned_cols=37 Identities=5% Similarity=0.066 Sum_probs=29.3
Q ss_pred CcEEEEecC-CCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 7 NFHFILLPF-LAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 7 ~~~vl~~~~-p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
+..|++... ..-|-..-.+.|++.|+++|++|.++-+
T Consensus 4 mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~KP 41 (228)
T 3of5_A 4 MKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLKP 41 (228)
T ss_dssp CEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEecc
Confidence 334444444 3689999999999999999999999853
No 281
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=22.03 E-value=68 Score=27.87 Aligned_cols=38 Identities=13% Similarity=-0.053 Sum_probs=30.3
Q ss_pred CcEEEEec--CCCcCCHHHHHHHHHHHHhC-CCeEEEEeCC
Q 044823 7 NFHFILLP--FLAQGHLIPMFDIARLLAQH-GATATIVTTP 44 (497)
Q Consensus 7 ~~~vl~~~--~p~~GHv~P~l~LA~~L~~r-Gh~Vt~~~~~ 44 (497)
++|++.+. -++-|-..-...||..|+++ |++|.++=..
T Consensus 3 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D 43 (245)
T 3ea0_A 3 AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDIS 43 (245)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECC
T ss_pred CCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECC
Confidence 34555443 35899999999999999999 9999999554
No 282
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=21.84 E-value=85 Score=28.78 Aligned_cols=38 Identities=13% Similarity=-0.114 Sum_probs=29.2
Q ss_pred CcEEEEecCCCcC-C---HHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 7 NFHFILLPFLAQG-H---LIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 7 ~~~vl~~~~p~~G-H---v~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
++||+++..+..+ | +..-..++++|.+.||+|..+-+.
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4688888876433 2 456789999999999999999754
No 283
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=21.83 E-value=46 Score=30.68 Aligned_cols=37 Identities=16% Similarity=0.122 Sum_probs=25.5
Q ss_pred CCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCC--eEEEEeCC
Q 044823 3 SETSNFHFILLPFLAQGHLIPMFDIARLLAQHGA--TATIVTTP 44 (497)
Q Consensus 3 ~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh--~Vt~~~~~ 44 (497)
++.++|||+++-.++.|-. +|..|+.+|| +|+++...
T Consensus 3 ~~~~~mkI~IiGaG~vG~~-----~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 3 TTVKPTKLAVIGAGAVGST-----LAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp ----CCEEEEECCSHHHHH-----HHHHHHHTTCCSEEEEECSS
T ss_pred cCCCCCEEEEECCCHHHHH-----HHHHHHhCCCCCEEEEEeCC
Confidence 3445689999876555543 7778999999 99998654
No 284
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=21.79 E-value=1.8e+02 Score=25.59 Aligned_cols=32 Identities=13% Similarity=0.003 Sum_probs=24.7
Q ss_pred EEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 9 HFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 9 ~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
|+++++.++.| + =..+|+.|+++|++|.++..
T Consensus 12 k~vlVTGas~G-I--G~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 12 KVIVIAGGIKN-L--GALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp CEEEEETCSSH-H--HHHHHHHHTTSSCEEEEEES
T ss_pred CEEEEECCCch-H--HHHHHHHHHHCCCEEEEEec
Confidence 67777777654 2 36789999999999998754
No 285
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=21.73 E-value=3.3e+02 Score=22.15 Aligned_cols=91 Identities=14% Similarity=0.113 Sum_probs=49.5
Q ss_pred HHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCCCCCCCCCchhHHHHHHHHHHh
Q 044823 24 MFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGCENFDMLPSIDLAYNFLTSLQK 103 (497)
Q Consensus 24 ~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (497)
...+.+.|+++|+.+.++|.......+...+...+.. .-+..+.+ ... + + .
T Consensus 73 ~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~-~~f~~~~~--------~~~--------~--k-~--------- 123 (187)
T 2wm8_A 73 VPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF-RYFVHREI--------YPG--------S--K-I--------- 123 (187)
T ss_dssp HHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT-TTEEEEEE--------SSS--------C--H-H---------
T ss_pred HHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH-hhcceeEE--------EeC--------c--h-H---------
Confidence 5678888999999999999764323344444332111 11222211 000 0 1 0
Q ss_pred chHHHHHHHhhcCCCCe--EEEECCCCcchHHHHHHcCCCeEEEec
Q 044823 104 LQLPFENLFREQTPQPC--CIISDMCIPWTVDTAAKFNVPRIIFHG 147 (497)
Q Consensus 104 ~~~~l~~~l~~~~~~~D--~vI~D~~~~~a~~~A~~lgIP~i~~~~ 147 (497)
..+..+++..+.+++ ++|.|. ..-...|+..|++++.+..
T Consensus 124 --~~~~~~~~~~~~~~~~~~~igD~--~~Di~~a~~aG~~~i~v~~ 165 (187)
T 2wm8_A 124 --THFERLQQKTGIPFSQMIFFDDE--RRNIVDVSKLGVTCIHIQN 165 (187)
T ss_dssp --HHHHHHHHHHCCCGGGEEEEESC--HHHHHHHHTTTCEEEECSS
T ss_pred --HHHHHHHHHcCCChHHEEEEeCC--ccChHHHHHcCCEEEEECC
Confidence 013333443333332 566775 4566789999999988654
No 286
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=21.64 E-value=46 Score=30.71 Aligned_cols=34 Identities=21% Similarity=0.193 Sum_probs=26.4
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCC-eEEEEeC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGA-TATIVTT 43 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh-~Vt~~~~ 43 (497)
+.+|+|.|+-.+..| ..+|+.|+++|| +|+++..
T Consensus 22 ~~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECS
T ss_pred CCCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcC
Confidence 346899999887777 478999999999 9998854
No 287
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=21.52 E-value=1e+02 Score=27.67 Aligned_cols=40 Identities=10% Similarity=0.164 Sum_probs=30.0
Q ss_pred HHHHHHHhhcCCCCeEEEECCCCc------chHHHHHHcCCCeEEEec
Q 044823 106 LPFENLFREQTPQPCCIISDMCIP------WTVDTAAKFNVPRIIFHG 147 (497)
Q Consensus 106 ~~l~~~l~~~~~~~D~vI~D~~~~------~a~~~A~~lgIP~i~~~~ 147 (497)
..+.++++. .+||+||+-.... -+..+|..||+|++...+
T Consensus 102 ~~La~~i~~--~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 102 RILTEVIKK--EAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp HHHHHHHHH--HCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHh--cCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 355556666 5899999776442 678899999999998643
No 288
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=21.51 E-value=87 Score=23.66 Aligned_cols=39 Identities=13% Similarity=0.066 Sum_probs=29.9
Q ss_pred CCcEEEEecCCCcCCHHHHH-HHHHHHHhCCCe-EEEEeCC
Q 044823 6 SNFHFILLPFLAQGHLIPMF-DIARLLAQHGAT-ATIVTTP 44 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l-~LA~~L~~rGh~-Vt~~~~~ 44 (497)
+++||+++|..+.|+-.=+- .|-+.+.++|.+ +.+-...
T Consensus 17 ~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~~~ 57 (110)
T 3czc_A 17 SMVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASCS 57 (110)
T ss_dssp -CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEee
Confidence 45789999999999887666 777888889988 6655433
No 289
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=21.47 E-value=43 Score=33.45 Aligned_cols=38 Identities=18% Similarity=0.307 Sum_probs=27.6
Q ss_pred CCCCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 1 MASETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
|.+.+...+|+++-.+.-| +.+|..|+++|++|+++-.
T Consensus 1 M~~~~~~~dVvIVGgG~aG-----l~aA~~La~~G~~V~liE~ 38 (512)
T 3e1t_A 1 MSTRPEVFDLIVIGGGPGG-----STLASFVAMRGHRVLLLER 38 (512)
T ss_dssp ----CEEEEEEEECCSHHH-----HHHHHHHHTTTCCEEEECS
T ss_pred CCCCCccCCEEEECcCHHH-----HHHHHHHHhCCCCEEEEcc
Confidence 5544455789998887666 7788899999999999944
No 290
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=21.39 E-value=59 Score=30.35 Aligned_cols=38 Identities=8% Similarity=-0.009 Sum_probs=27.5
Q ss_pred CCcEEEEecCCCcCCH----HHHHHHHHHHHhCCCeEEEEeC
Q 044823 6 SNFHFILLPFLAQGHL----IPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv----~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
+++||+++..+..+-. ..-..++++|.+.||+|..+..
T Consensus 2 ~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (343)
T 1e4e_A 2 NRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGI 43 (343)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEE
Confidence 4688998876533222 2566789999999999998754
No 291
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=21.37 E-value=1.3e+02 Score=26.14 Aligned_cols=40 Identities=13% Similarity=-0.017 Sum_probs=23.5
Q ss_pred CCCCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 1 MASETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
|+.+.+. |+++++..+ |-+ =..+|+.|+++|++|.++.-.
T Consensus 1 M~~~~~~-k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 1 MAASGEA-RRVLVYGGR-GAL--GSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp -----CC-CEEEEETTT-SHH--HHHHHHHHHTTTCEEEEEESS
T ss_pred CCccCCC-CEEEEECCC-cHH--HHHHHHHHHhCCCEEEEEeCC
Confidence 6654444 455555544 323 357899999999999987643
No 292
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=21.34 E-value=66 Score=31.96 Aligned_cols=34 Identities=21% Similarity=0.134 Sum_probs=27.0
Q ss_pred HHHHHHhhcCCCCeEEEECCCCcchHHHHHHcCCCeEEE
Q 044823 107 PFENLFREQTPQPCCIISDMCIPWTVDTAAKFNVPRIIF 145 (497)
Q Consensus 107 ~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~i~~ 145 (497)
++.+.+++ .+||++|.. .....+|+++|||++.+
T Consensus 408 el~~~i~~--~~pDL~ig~---~~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 408 EFEEFVKR--IKPDLIGSG---IKEKFIFQKMGIPFREM 441 (492)
T ss_dssp HHHHHHHH--HCCSEEEEC---HHHHHHHHHTTCCEEES
T ss_pred HHHHHHHh--cCCcEEEeC---cchhHHHHHcCCCEEec
Confidence 45666666 699999987 45678999999999964
No 293
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=21.33 E-value=81 Score=28.91 Aligned_cols=38 Identities=13% Similarity=0.113 Sum_probs=25.7
Q ss_pred CCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 3 SETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 3 ~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
...+.++|+++ ++.|.+- ..|++.|.++||+|+.+.-.
T Consensus 7 ~~~~~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 7 VLPEGSLVLVT--GANGFVA--SHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp SSCTTCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred cCCCCCEEEEE--CCccHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 33455676654 4445443 46789999999999988653
No 294
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=21.17 E-value=76 Score=31.23 Aligned_cols=33 Identities=12% Similarity=-0.013 Sum_probs=26.3
Q ss_pred CCcEEEEecCCCcCCHHHHHHHHHHHHhC--CCeEEEEeC
Q 044823 6 SNFHFILLPFLAQGHLIPMFDIARLLAQH--GATATIVTT 43 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~LA~~L~~r--Gh~Vt~~~~ 43 (497)
++|||.++-.+..| ..+|..|+++ ||+|+++-.
T Consensus 4 ~~mkI~VIG~G~mG-----~~lA~~La~~g~G~~V~~~d~ 38 (467)
T 2q3e_A 4 EIKKICCIGAGYVG-----GPTCSVIAHMCPEIRVTVVDV 38 (467)
T ss_dssp CCCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEECS
T ss_pred CccEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEEEC
Confidence 45799999877777 4678888888 899998843
No 295
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=21.15 E-value=1.4e+02 Score=27.48 Aligned_cols=74 Identities=12% Similarity=0.132 Sum_probs=53.3
Q ss_pred CCHhhHHHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhc-cCCccccccccCchh
Q 044823 294 LTSSQLIELGLGLEASKKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILS-HPAVGGFLTHCGWNS 372 (497)
Q Consensus 294 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~-~~~~~~~ItHgG~gs 372 (497)
.+.+..+.+.+++.+...+.||...++... ..+.++++...+-. +|.. ||=+.-...
T Consensus 64 td~~Ra~dL~~a~~Dp~i~aI~~~rGGyga--------------------~rlLp~LD~~~i~~a~PK~--~iGySDiTa 121 (311)
T 1zl0_A 64 TVEQRLEDLHNAFDMPDITAVWCLRGGYGC--------------------GQLLPGLDWGRLQAASPRP--LIGFSDISV 121 (311)
T ss_dssp CHHHHHHHHHHHHHSTTEEEEEESCCSSCG--------------------GGGTTTCCHHHHHHSCCCC--EEECGGGHH
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEccCCcCH--------------------HHHhhccchhhhhccCCCE--EEEEchhHH
Confidence 446677889999999999999998887532 23345666665555 6766 888888888
Q ss_pred HHHHHH-hCCcEeccCCc
Q 044823 373 SLEGIS-AGVQMLTWPLF 389 (497)
Q Consensus 373 ~~eal~-~GvP~l~~P~~ 389 (497)
++-+++ .|++.+-=|+.
T Consensus 122 L~~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 122 LLSAFHRHGLPAIHGPVA 139 (311)
T ss_dssp HHHHHHHTTCCEEECCCG
T ss_pred HHHHHHHcCCcEEECHhh
Confidence 888876 37777776654
No 296
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=21.07 E-value=3.6e+02 Score=22.44 Aligned_cols=145 Identities=16% Similarity=0.120 Sum_probs=78.2
Q ss_pred eEEEEeeCCcccCCHhhHHHHHHHHHhCCCCeEEEEeCCCchhhhhhhhchhhH---HHHhcCCCeeeecccchHhhhcc
Q 044823 282 SVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVSRVGNKLEELEKWLVEENF---EERIKGRGLLIRGWAPQVMILSH 358 (497)
Q Consensus 282 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~---~~~~~~~nv~v~~~~pq~~lL~~ 358 (497)
|.|-|=+||.. +-...++..+.|+.++..+-..+-+.+. .|+.+ .+.....++
T Consensus 23 p~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SAHR--------tp~~l~~~~~~a~~~g~-------------- 78 (181)
T 4b4k_A 23 SLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAHR--------TPDYMFEYAETARERGL-------------- 78 (181)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--------SHHHHHHHHHHTTTTTC--------------
T ss_pred ccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcccc--------ChHHHHHHHHHHHhcCc--------------
Confidence 46777788877 5567888899999999988777666554 33322 222112222
Q ss_pred CCccccccccCch----hHHHHHHhCCcEeccCCcccc---hhhHHHHHHHHcceeEeccccccccccccccccccCHHH
Q 044823 359 PAVGGFLTHCGWN----SSLEGISAGVQMLTWPLFTDQ---FCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKED 431 (497)
Q Consensus 359 ~~~~~~ItHgG~g----s~~eal~~GvP~l~~P~~~DQ---~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~ 431 (497)
+++|.=.|.- ++.-+ ..-+|+|.+|..... .+.-.-+. +.=-|+-+-.-. .+ +++..++.-
T Consensus 79 ---~ViIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSiv-QMP~GvpVaTva---ig----~~ga~NAal 146 (181)
T 4b4k_A 79 ---KVIIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIV-QMPGGVPVATVA---IG----KAGSTNAGL 146 (181)
T ss_dssp ---CEEEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHH-TCCTTCCCEECC---SS----HHHHHHHHH
T ss_pred ---eEEEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHH-hCCCCCceEEEe---cC----CccHHHHHH
Confidence 2266555532 34433 467899999996543 22222222 333343332210 00 000122333
Q ss_pred HHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhC
Q 044823 432 VETAINILMDDGEERDGRRRRAKEFGELAKRALEEG 467 (497)
Q Consensus 432 l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~ 467 (497)
+...|-. +.|+ .++++.+.+++.+++.+.+.
T Consensus 147 lA~qILa-~~d~----~l~~kl~~~r~~~~~~v~~~ 177 (181)
T 4b4k_A 147 LAAQILG-SFHD----DIHDALELRREAIEKDVREG 177 (181)
T ss_dssp HHHHHHT-TTCH----HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHc-cCCH----HHHHHHHHHHHHHHHHHHHh
Confidence 4443332 3455 78888888888877665443
No 297
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=21.07 E-value=1e+02 Score=30.01 Aligned_cols=34 Identities=32% Similarity=0.355 Sum_probs=27.3
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
.+.+||+|+-.+..| +.+|+.|+++||+|+..=.
T Consensus 7 ~~~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 7 FENKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TTTCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred cCCCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 356799999887655 3569999999999999854
No 298
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=21.05 E-value=52 Score=28.60 Aligned_cols=28 Identities=14% Similarity=0.236 Sum_probs=22.2
Q ss_pred EEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEe
Q 044823 10 FILLPFLAQGHLIPMFDIARLLAQHGATATIVT 42 (497)
Q Consensus 10 vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~ 42 (497)
|+++-.+--| +.+|..|+++|++|+++=
T Consensus 5 V~IIGaGpaG-----L~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 5 IAIIGTGIAG-----LSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp EEEECCSHHH-----HHHHHHHHHTTCCEEEEC
T ss_pred EEEECcCHHH-----HHHHHHHHHCCCCEEEEE
Confidence 6666555444 789999999999999994
No 299
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=21.04 E-value=64 Score=29.15 Aligned_cols=31 Identities=23% Similarity=0.274 Sum_probs=24.9
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
|||.|+-.+..| ..+|+.|+++||+|+++..
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNR 32 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcC
Confidence 688888777666 4578999999999998754
No 300
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=21.04 E-value=1.3e+02 Score=25.35 Aligned_cols=40 Identities=5% Similarity=-0.099 Sum_probs=34.6
Q ss_pred CCCcEEEEecCC-CcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 5 TSNFHFILLPFL-AQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 5 ~~~~~vl~~~~p-~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
..+-+|.+++.+ +.|-..-++.+++.+..+|..|.++.+.
T Consensus 5 ~~~g~i~v~~G~mgsGKTT~ll~~a~r~~~~g~kV~v~k~~ 45 (191)
T 1xx6_A 5 KDHGWVEVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKPE 45 (191)
T ss_dssp TTCCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCEEEEEECCCCCcHHHHHHHHHHHHHHCCCEEEEEEec
Confidence 344578888888 8999999999999999999999999865
No 301
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=20.97 E-value=1.1e+02 Score=27.38 Aligned_cols=39 Identities=13% Similarity=-0.014 Sum_probs=29.2
Q ss_pred HHHHHHHhhcCCCCeEEEECCCCc------chHHHHHHcCCCeEEEe
Q 044823 106 LPFENLFREQTPQPCCIISDMCIP------WTVDTAAKFNVPRIIFH 146 (497)
Q Consensus 106 ~~l~~~l~~~~~~~D~vI~D~~~~------~a~~~A~~lgIP~i~~~ 146 (497)
..+.++++. .+||+||+-.... -+..+|..||+|++...
T Consensus 106 ~~La~~i~~--~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v 150 (255)
T 1efv_B 106 RVLAKLAEK--EKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFA 150 (255)
T ss_dssp HHHHHHHHH--HTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHh--cCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccce
Confidence 345555666 5799999776442 57889999999999854
No 302
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=20.82 E-value=61 Score=29.29 Aligned_cols=31 Identities=19% Similarity=0.180 Sum_probs=25.4
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
+||.|+-.+..|. .+|+.|+++||+|+++..
T Consensus 2 ~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~dr 32 (287)
T 3pdu_A 2 TTYGFLGLGIMGG-----PMAANLVRAGFDVTVWNR 32 (287)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHHTCCEEEECS
T ss_pred CeEEEEccCHHHH-----HHHHHHHHCCCeEEEEcC
Confidence 5799998887774 578999999999998854
No 303
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=20.76 E-value=2.9e+02 Score=25.13 Aligned_cols=109 Identities=12% Similarity=0.102 Sum_probs=0.0
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHHHHHhhhcCCCeEEEEecCCccccCCCCCCCC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTTPVNAARFKTVLARALQCRLQIRLIEIQFPWQEAGLPEGCEN 84 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~ 84 (497)
.+++||+++.++. || -+-.|..+-.+-...+.+..--+|++......+.. ++.++.+|
T Consensus 93 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~-----gIp~~~~~-------------- 150 (292)
T 3lou_A 93 AARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQH-----GLPFRHFP-------------- 150 (292)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHHT-----TCCEEECC--------------
T ss_pred CCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHHc-----CCCEEEeC--------------
Q ss_pred CCCCCchhHHHHHHHHHHhchHHHHHHHhhcCCCCeEEEECCCC-cchHHHHHHcCCCeEEEech
Q 044823 85 FDMLPSIDLAYNFLTSLQKLQLPFENLFREQTPQPCCIISDMCI-PWTVDTAAKFNVPRIIFHGF 148 (497)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~a~~~A~~lgIP~i~~~~~ 148 (497)
... ..-......+.+.+++ .++|+||.=.|. .-...+-..+.-.++-++++
T Consensus 151 -------~~~----~~r~~~~~~~~~~l~~--~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 202 (292)
T 3lou_A 151 -------ITA----DTKAQQEAQWLDVFET--SGAELVILARYMQVLSPEASARLANRAINIHHS 202 (292)
T ss_dssp -------CCS----SCHHHHHHHHHHHHHH--HTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred -------CCc----CCHHHHHHHHHHHHHH--hCCCEEEecCchhhCCHHHHhhhcCCeEEeCCC
No 304
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=20.71 E-value=1.8e+02 Score=22.55 Aligned_cols=47 Identities=4% Similarity=-0.119 Sum_probs=31.3
Q ss_pred hCCcEeccCCcccchhhHHHHHHHHcceeEeccccccccccccccccccCHHHHHHHHHHHhc
Q 044823 379 AGVQMLTWPLFTDQFCNEKLIVEVLRIGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMD 441 (497)
Q Consensus 379 ~GvP~l~~P~~~DQ~~na~~~~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~ 441 (497)
..+|+|++--..| ........ +.|+--.+.+- ++.++|..+|++++.
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~-~~g~~~~l~kP--------------~~~~~L~~~i~~~~~ 120 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAI-QDGAYDFIAKP--------------FAADRLVQSARRAEE 120 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHH-HTTCCEEEESS--------------CCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHH-hcCCCeEEeCC--------------CCHHHHHHHHHHHHH
Confidence 4788887755444 33444453 66765555433 789999999999985
No 305
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=20.53 E-value=2.1e+02 Score=25.34 Aligned_cols=35 Identities=20% Similarity=0.269 Sum_probs=24.8
Q ss_pred EEEEecCCCc-CCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 044823 9 HFILLPFLAQ-GHLIPMFDIARLLAQHGATATIVTTPV 45 (497)
Q Consensus 9 ~vl~~~~p~~-GHv~P~l~LA~~L~~rGh~Vt~~~~~~ 45 (497)
|+++++..+- +-+ =..+|+.|+++|++|.++.-..
T Consensus 27 k~vlVTGasg~~GI--G~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 27 KKILITGLLSNKSI--AYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp CEEEECCCCSTTCH--HHHHHHHHHHTTCEEEEEECTT
T ss_pred CEEEEECCCCCCCH--HHHHHHHHHHcCCEEEEeeCch
Confidence 5677777541 112 2578999999999999887654
No 306
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=20.53 E-value=94 Score=25.44 Aligned_cols=27 Identities=22% Similarity=0.170 Sum_probs=21.6
Q ss_pred EEEEeeCCcccCCHhhHHHHHHHHHhC
Q 044823 283 VVYVCLGSICNLTSSQLIELGLGLEAS 309 (497)
Q Consensus 283 vv~vs~GS~~~~~~~~~~~~~~al~~~ 309 (497)
.+|+++||....+...+...+++|...
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~ 28 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDI 28 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTS
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcC
Confidence 589999999876677777778888765
No 307
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=20.48 E-value=1.5e+02 Score=26.74 Aligned_cols=38 Identities=16% Similarity=0.134 Sum_probs=23.7
Q ss_pred CCCcEEEEec-CCCcCCHHHHH--HHHHHHHhCCCeEEEEe
Q 044823 5 TSNFHFILLP-FLAQGHLIPMF--DIARLLAQHGATATIVT 42 (497)
Q Consensus 5 ~~~~~vl~~~-~p~~GHv~P~l--~LA~~L~~rGh~Vt~~~ 42 (497)
|++||||++. +|-...++-.+ ...+.|.++||+|+++-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 5567777663 44444444433 46678888999999884
No 308
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=20.40 E-value=61 Score=31.69 Aligned_cols=38 Identities=13% Similarity=0.173 Sum_probs=27.2
Q ss_pred CCCCCCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 1 MASETSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
|.+++...+|+++-.+.-| +..|..|+++|++|+++=.
T Consensus 5 ~~~~~~~~dvvVIGaG~~G-----L~aA~~La~~G~~V~vlE~ 42 (453)
T 2bcg_G 5 QETIDTDYDVIVLGTGITE-----CILSGLLSVDGKKVLHIDK 42 (453)
T ss_dssp --CCCCBCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred hhhccccCCEEEECcCHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 3344455678888776443 7888999999999999943
No 309
>1r8j_A KAIA; circadian clock protein; 2.03A {Synechococcus elongatus pcc 7942} SCOP: a.186.1.1 c.23.1.5 PDB: 1m2e_A 1m2f_A
Probab=20.39 E-value=3.7e+02 Score=24.03 Aligned_cols=70 Identities=13% Similarity=0.030 Sum_probs=49.4
Q ss_pred chhhHHHHHHHHc-ceeEeccccccccccccccccccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCCh
Q 044823 392 QFCNEKLIVEVLR-IGVSVGVEVPMKFGEEEKIGVLVKKEDVETAINILMDDGEERDGRRRRAKEFGELAKRALEEGGSS 470 (497)
Q Consensus 392 Q~~na~~~~e~~G-~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~g~~ 470 (497)
|..-+.++.|++| +|+..+.+.+..+ .++++++=.+-++.+.. .|| +..-+++....+.
T Consensus 158 Q~rL~~KLkERLGYLGVYYKR~p~~F~-------rnl~~~ErqeLl~~Lk~------~YR-------~IlL~YF~~d~~~ 217 (289)
T 1r8j_A 158 QRDLAQRLQERLGYLGVYYKRDPDRFL-------RNLPAYESQKLHQAMQT------SYR-------EIVLSYFSPNSNL 217 (289)
T ss_dssp HHHHHHHHHHHHEEEEEEECCCGGGST-------TTSCHHHHHHHHHHHHH------HHH-------HHHHHHTSTTCCH
T ss_pred HhhHHHHHHHHhcccceeeeeCHHHHH-------HhCCHHHHHHHHHHHHH------HHH-------HHHHHHhCCchHH
Confidence 4557788888888 5788766543333 36777776666665543 444 5667778889999
Q ss_pred HHHHHHHHHHH
Q 044823 471 YNNIKFFHPRY 481 (497)
Q Consensus 471 ~~~~~~~~~~~ 481 (497)
+.++++||+..
T Consensus 218 Nq~ID~FVN~a 228 (289)
T 1r8j_A 218 NQSIDNFVNMA 228 (289)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999865
No 310
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=20.37 E-value=87 Score=30.45 Aligned_cols=31 Identities=16% Similarity=0.091 Sum_probs=24.9
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
|||.++-.+..| ..+|..|+++||+|+++..
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~d~ 31 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGVDV 31 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 478888776666 4688899999999998853
No 311
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=20.36 E-value=3.1e+02 Score=23.87 Aligned_cols=33 Identities=18% Similarity=0.102 Sum_probs=24.3
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
-|+++++..+.| + =..+|++|+++|++|.++..
T Consensus 8 ~k~vlVTGas~G-I--G~aia~~la~~G~~V~~~~~ 40 (259)
T 3edm_A 8 NRTIVVAGAGRD-I--GRACAIRFAQEGANVVLTYN 40 (259)
T ss_dssp TCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEcC
Confidence 356777766643 2 25899999999999988744
No 312
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=20.34 E-value=67 Score=31.78 Aligned_cols=34 Identities=12% Similarity=0.145 Sum_probs=28.0
Q ss_pred CCCcEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 5 TSNFHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
...|||.++-.+..| +.+|..|+++||+|+++-.
T Consensus 6 ~~~~~I~VIG~G~vG-----~~lA~~la~~G~~V~~~d~ 39 (478)
T 2y0c_A 6 HGSMNLTIIGSGSVG-----LVTGACLADIGHDVFCLDV 39 (478)
T ss_dssp -CCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCceEEEECcCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 457899999888777 5679999999999999854
No 313
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=20.29 E-value=3.7e+02 Score=23.64 Aligned_cols=32 Identities=28% Similarity=0.199 Sum_probs=24.3
Q ss_pred EEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 9 HFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 9 ~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
|+++++..+.| + =..+|+.|+++|++|.++.-
T Consensus 11 k~~lVTGas~g-I--G~a~a~~l~~~G~~V~~~~r 42 (281)
T 3s55_A 11 KTALITGGARG-M--GRSHAVALAEAGADIAICDR 42 (281)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCch-H--HHHHHHHHHHCCCeEEEEeC
Confidence 57777776643 2 35789999999999998865
No 314
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=20.17 E-value=53 Score=30.39 Aligned_cols=31 Identities=23% Similarity=0.200 Sum_probs=25.0
Q ss_pred cEEEEecCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Q 044823 8 FHFILLPFLAQGHLIPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
|||.|+-.+..|. .+|..|+++||+|+++..
T Consensus 1 m~I~iiG~G~mG~-----~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGS-----ALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEEc
Confidence 4788887776663 568899999999999865
No 315
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=20.15 E-value=53 Score=31.01 Aligned_cols=38 Identities=3% Similarity=-0.017 Sum_probs=27.3
Q ss_pred CCcEEEEecCCCcCCH----HHHHHHHHHHHhCCCeEEEEeC
Q 044823 6 SNFHFILLPFLAQGHL----IPMFDIARLLAQHGATATIVTT 43 (497)
Q Consensus 6 ~~~~vl~~~~p~~GHv----~P~l~LA~~L~~rGh~Vt~~~~ 43 (497)
.++||+++..+..+-. .....++++|.++||+|..+..
T Consensus 2 ~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (364)
T 2i87_A 2 TKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYI 43 (364)
T ss_dssp -CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEE
T ss_pred CCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEE
Confidence 4688999886543322 3447789999999999998853
No 316
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=20.14 E-value=98 Score=29.27 Aligned_cols=39 Identities=10% Similarity=0.011 Sum_probs=31.4
Q ss_pred CCcEEEEec--CCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 6 SNFHFILLP--FLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 6 ~~~~vl~~~--~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
+++|++.+. -++-|-..-...||..|+++|++|.++-..
T Consensus 141 ~~~kvIav~s~KGGvGKTT~a~nLA~~La~~g~rVlliD~D 181 (373)
T 3fkq_A 141 DKSSVVIFTSPCGGVGTSTVAAACAIAHANMGKKVFYLNIE 181 (373)
T ss_dssp TSCEEEEEECSSTTSSHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCceEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 345555554 468999999999999999999999999643
No 317
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=20.14 E-value=1.6e+02 Score=24.43 Aligned_cols=37 Identities=8% Similarity=0.126 Sum_probs=24.6
Q ss_pred CcEEEE-ecCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 044823 7 NFHFIL-LPFLAQGHLIPMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 7 ~~~vl~-~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
..|+++ +....+=. .=++.-.+.|.+.|++|+++++.
T Consensus 7 t~~~v~il~~~gFe~-~E~~~p~~~l~~ag~~V~~~s~~ 44 (177)
T 4hcj_A 7 TNNILYVMSGQNFQD-EEYFESKKIFESAGYKTKVSSTF 44 (177)
T ss_dssp CCEEEEECCSEEECH-HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCCccH-HHHHHHHHHHHHCCCEEEEEECC
Confidence 344444 44444333 34566778899999999999875
No 318
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=20.12 E-value=1.2e+02 Score=27.19 Aligned_cols=38 Identities=13% Similarity=-0.058 Sum_probs=27.5
Q ss_pred CcEEEEecCCCc-CCHH---HHHHHHHHHHhCCCeEEEEeCC
Q 044823 7 NFHFILLPFLAQ-GHLI---PMFDIARLLAQHGATATIVTTP 44 (497)
Q Consensus 7 ~~~vl~~~~p~~-GHv~---P~l~LA~~L~~rGh~Vt~~~~~ 44 (497)
++||+++..+.. -|-. ....++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 368888876532 2222 3467999999999999998765
No 319
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=20.01 E-value=3e+02 Score=25.47 Aligned_cols=110 Identities=15% Similarity=0.130 Sum_probs=59.4
Q ss_pred eEEEEeeCCcccCCHhhHHHHHHHHHhC-CCCeEEEEeCCCchhhhhhhhchhhHHHHhcCCCeeeecccchHhhhccCC
Q 044823 282 SVVYVCLGSICNLTSSQLIELGLGLEAS-KKPFIWVSRVGNKLEELEKWLVEENFEERIKGRGLLIRGWAPQVMILSHPA 360 (497)
Q Consensus 282 ~vv~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~ 360 (497)
.+.+|++|.+. ...+.++.+. +.+++.+...+... -..+.++. ++. .+-...+++..++
T Consensus 7 ~vgiiG~G~~g-------~~~~~~l~~~~~~~lvav~d~~~~~--------~~~~~~~~---g~~--~~~~~~~~l~~~~ 66 (354)
T 3db2_A 7 GVAAIGLGRWA-------YVMADAYTKSEKLKLVTCYSRTEDK--------REKFGKRY---NCA--GDATMEALLARED 66 (354)
T ss_dssp EEEEECCSHHH-------HHHHHHHTTCSSEEEEEEECSSHHH--------HHHHHHHH---TCC--CCSSHHHHHHCSS
T ss_pred eEEEEccCHHH-------HHHHHHHHhCCCcEEEEEECCCHHH--------HHHHHHHc---CCC--CcCCHHHHhcCCC
Confidence 37788888755 2456666665 55666665443211 11222221 222 2455677775544
Q ss_pred cccccccc----CchhHHHHHHhCCcEecc-CCcc--cchh-hHHHHHHHHcceeEeccc
Q 044823 361 VGGFLTHC----GWNSSLEGISAGVQMLTW-PLFT--DQFC-NEKLIVEVLRIGVSVGVE 412 (497)
Q Consensus 361 ~~~~ItHg----G~gs~~eal~~GvP~l~~-P~~~--DQ~~-na~~~~e~~G~G~~l~~~ 412 (497)
+.+++--- -..-+.+++.+|+++++= |+.. ++-. ....+ ++.|+-+.+...
T Consensus 67 ~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a-~~~~~~~~v~~~ 125 (354)
T 3db2_A 67 VEMVIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVI-KETGVKFLCGHS 125 (354)
T ss_dssp CCEEEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHH-HHHCCCEEEECG
T ss_pred CCEEEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHH-HHcCCeEEEeec
Confidence 43344211 134577899999998873 6544 3333 33334 577777666554
Done!