BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>044831
MSCYGQNCGYGSSCKCGSDCNVCRMYPDLSYSESPTTTTDILVLGDVYAKMHYEVSEMGF
GAEGDCKCKFYKNFYLN

High Scoring Gene Products

Symbol, full name Information P value
MT2A
AT3G09390
protein from Arabidopsis thaliana 1.4e-14
MT2B
AT5G02380
protein from Arabidopsis thaliana 2.2e-11
KRTAP21-1
Keratin-associated protein 21-1
protein from Homo sapiens 0.00023

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  044831
        (77 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2083519 - symbol:MT2A "metallothionein 2A" spe...   186  1.4e-14   1
TAIR|locus:2180132 - symbol:MT2B "AT5G02380" species:3702...   156  2.2e-11   1
UNIPROTKB|Q3LI58 - symbol:KRTAP21-1 "Keratin-associated p...    70  0.00023   2


>TAIR|locus:2083519 [details] [associations]
            symbol:MT2A "metallothionein 2A" species:3702
            "Arabidopsis thaliana" [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0006878 "cellular copper ion homeostasis"
            evidence=ISS] [GO:0005507 "copper ion binding" evidence=IDA]
            InterPro:IPR000347 Pfam:PF01439 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006878 GO:GO:0005507 EMBL:AC011436
            EMBL:D11394 EMBL:X62818 EMBL:U15108 EMBL:AY037263 EMBL:AY077669
            EMBL:Z26416 IPI:IPI00529178 PIR:S18069 PIR:S57861
            RefSeq:NP_187550.1 UniGene:At.24444 UniGene:At.42166
            UniGene:At.67557 STRING:P25860 PRIDE:P25860
            EnsemblPlants:AT3G09390.1 GeneID:820098 KEGG:ath:AT3G09390
            TAIR:At3g09390 eggNOG:NOG259977 HOGENOM:HOG000220916
            InParanoid:P25860 OMA:NAENDAC PhylomeDB:P25860
            ProtClustDB:CLSN2685132 Genevestigator:P25860 GermOnline:AT3G09390
            Uniprot:P25860
        Length = 81

 Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 39/70 (55%), Positives = 43/70 (61%)

Query:     1 MSCYGQNCGYGSSCKCGSDCNVCRMYPDLSYSESPTTTTDILVLGDVYA-KMHYEVSEMG 59
             MSC G NCG GS CKCG+ C  C+MYPDL +S   TTTT+  VLG   A K  YE S   
Sbjct:     1 MSCCGGNCGCGSGCKCGNGCGGCKMYPDLGFS-GETTTTETFVLGVAPAMKNQYEASGES 59

Query:    60 FGAEGD-CKC 68
               AE D CKC
Sbjct:    60 NNAENDACKC 69


>TAIR|locus:2180132 [details] [associations]
            symbol:MT2B "AT5G02380" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0006007 "glucose catabolic
            process" evidence=RCA] [GO:0006970 "response to osmotic stress"
            evidence=RCA] [GO:0046686 "response to cadmium ion" evidence=RCA]
            [GO:0005507 "copper ion binding" evidence=IDA] InterPro:IPR000347
            Pfam:PF01439 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005507
            EMBL:AL162874 UniGene:At.48845 eggNOG:NOG259977
            HOGENOM:HOG000220916 ProtClustDB:CLSN2685132 EMBL:U11256
            EMBL:AF324665 EMBL:AF339712 EMBL:BT004570 IPI:IPI00547466
            PIR:S57862 RefSeq:NP_195858.1 UniGene:At.20086 UniGene:At.20468
            UniGene:At.20592 UniGene:At.26254 UniGene:At.48973 UniGene:At.73025
            STRING:Q38805 EnsemblPlants:AT5G02380.1 GeneID:831816
            KEGG:ath:AT5G02380 TAIR:At5g02380 InParanoid:Q38805 OMA:GSENGGC
            PhylomeDB:Q38805 Genevestigator:Q38805 GermOnline:AT5G02380
            Uniprot:Q38805
        Length = 77

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 35/70 (50%), Positives = 40/70 (57%)

Query:     1 MSCYGQNCGYGSSCKCGSDCNVCRMYPDLSYSESPTTTTDILVLGDVYA-KMHYEVSEMG 59
             MSC G +CG GS+CKCG+ C  C+ YPDL       T T+ LVLG   A    YE S   
Sbjct:     1 MSCCGGSCGCGSACKCGNGCGGCKRYPDLE-----NTATETLVLGVAPAMNSQYEASGET 55

Query:    60 FGAEGD-CKC 68
             F AE D CKC
Sbjct:    56 FVAENDACKC 65


>UNIPROTKB|Q3LI58 [details] [associations]
            symbol:KRTAP21-1 "Keratin-associated protein 21-1"
            species:9606 "Homo sapiens" [GO:0005882 "intermediate filament"
            evidence=IEA] GO:GO:0005882 EMBL:AB096960 EMBL:BC105029
            EMBL:BC105031 IPI:IPI00373957 RefSeq:NP_853650.1 UniGene:Hs.539723
            UniGene:Hs.567837 ProteinModelPortal:Q3LI58 DMDM:88909176
            PRIDE:Q3LI58 Ensembl:ENST00000335093 GeneID:337977 KEGG:hsa:337977
            UCSC:uc011adi.2 CTD:337977 GeneCards:GC21M032127 H-InvDB:HIX0037540
            HGNC:HGNC:18945 neXtProt:NX_Q3LI58 PharmGKB:PA134897035
            eggNOG:NOG264603 OMA:CGFGSHY GenomeRNAi:337977 NextBio:96849
            CleanEx:HS_KRTAP21-1 Genevestigator:Q3LI58 Uniprot:Q3LI58
        Length = 79

 Score = 70 (29.7 bits), Expect = 0.00023, Sum P(2) = 0.00023
 Identities = 12/19 (63%), Positives = 13/19 (68%)

Query:     1 MSC--YGQNCGYGSSCKCG 17
             M C  YG +CGYGS C CG
Sbjct:     1 MCCNYYGNSCGYGSGCGCG 19

 Score = 30 (15.6 bits), Expect = 0.00023, Sum P(2) = 0.00023
 Identities = 4/12 (33%), Positives = 7/12 (58%)

Query:    59 GFGAEGDCKCKF 70
             G+G+   C C +
Sbjct:    19 GYGSGSGCGCGY 30


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.137   0.459    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       77        77   0.00091  102 3  11 22  0.39    29
                                                     29  0.50    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  542 (58 KB)
  Total size of DFA:  117 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.87u 0.21s 9.08t   Elapsed:  00:00:00
  Total cpu time:  8.88u 0.21s 9.09t   Elapsed:  00:00:00
  Start:  Fri May 10 12:30:22 2013   End:  Fri May 10 12:30:22 2013

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