Query 044831
Match_columns 77
No_of_seqs 109 out of 209
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 12:23:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044831.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044831hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qjl_A Metallothionein; metal- 95.3 0.0096 3.3E-07 31.2 2.0 15 6-20 5-19 (28)
2 1qjl_A Metallothionein; metal- 95.0 0.019 6.3E-07 30.1 2.5 19 4-24 9-27 (28)
3 1m0j_A Metallothionein MT_NC; 77.9 1.3 4.4E-05 23.0 1.8 13 5-17 8-20 (28)
4 1t2y_A Metallothionein, MT; pr 77.4 1.2 4.1E-05 22.8 1.6 11 6-16 9-19 (26)
5 4mt2_A Metallothionein isoform 38.9 14 0.00047 22.2 1.5 13 5-17 11-23 (62)
6 2kak_A EC protein I/II; metall 36.3 15 0.00052 21.4 1.3 7 14-20 35-41 (53)
7 1mrb_A CD7 metallothionein-2A; 27.9 50 0.0017 17.3 2.4 14 10-24 7-21 (31)
8 1ji9_A Metallothionein-III; 3- 23.0 66 0.0023 17.4 2.3 14 10-24 7-21 (37)
9 2k84_A P9; HOST-virus interact 20.1 32 0.0011 17.9 0.7 6 25-30 1-6 (30)
10 1rgx_A Resistin, adipose TISS; 19.6 19 0.00065 23.9 -0.4 9 13-21 75-83 (114)
No 1
>1qjl_A Metallothionein; metal-binding, detoxification, radical scavenger; NMR {Strongylocentrotus purpuratus} SCOP: g.46.1.1
Probab=95.30 E-value=0.0096 Score=31.24 Aligned_cols=15 Identities=47% Similarity=1.283 Sum_probs=10.9
Q ss_pred CCCCCCCCCCCCCCC
Q 044831 6 QNCGYGSSCKCGSDC 20 (77)
Q Consensus 6 gnCgCGs~C~CGsgC 20 (77)
.+|.||.+||||++|
T Consensus 5 ~~c~cg~~CkCgs~C 19 (28)
T 1qjl_A 5 AACKCANGCKCGSGC 19 (28)
T ss_dssp TTCCCCTTCCTTSCC
T ss_pred cccccCCCCccCCCc
Confidence 557777777777776
No 2
>1qjl_A Metallothionein; metal-binding, detoxification, radical scavenger; NMR {Strongylocentrotus purpuratus} SCOP: g.46.1.1
Probab=95.00 E-value=0.019 Score=30.12 Aligned_cols=19 Identities=32% Similarity=0.950 Sum_probs=15.2
Q ss_pred cCCCCCCCCCCCCCCCCCCCc
Q 044831 4 YGQNCGYGSSCKCGSDCNVCR 24 (77)
Q Consensus 4 cggnCgCGs~C~CGsgCggCk 24 (77)
||.+|.||++|+| ++| .|+
T Consensus 9 cg~~CkCgs~C~C-~~C-~C~ 27 (28)
T 1qjl_A 9 CANGCKCGSGCSC-TEG-NCA 27 (28)
T ss_dssp CCTTCCTTSCCCC-BTT-BCC
T ss_pred cCCCCccCCCccc-CCc-ccc
Confidence 6788999999999 666 443
No 3
>1m0j_A Metallothionein MT_NC; cadmium thiolate-cluster, metal binding protein; NMR {Notothenia coriiceps} SCOP: g.46.1.1
Probab=77.89 E-value=1.3 Score=23.04 Aligned_cols=13 Identities=38% Similarity=1.089 Sum_probs=10.3
Q ss_pred CCCCCCCCCCCCC
Q 044831 5 GQNCGYGSSCKCG 17 (77)
Q Consensus 5 ggnCgCGs~C~CG 17 (77)
+|.|.|+++|+|-
T Consensus 8 ~gsC~C~~sCkC~ 20 (28)
T 1m0j_A 8 SGTCNCGGSCTCT 20 (28)
T ss_dssp HSSCCCSSSCCSS
T ss_pred CCcccCCCccccC
Confidence 4778888888885
No 4
>1t2y_A Metallothionein, MT; protein fold, no secondary structural elements, metal binding protein; NMR {Synthetic} SCOP: g.46.1.1
Probab=77.42 E-value=1.2 Score=22.84 Aligned_cols=11 Identities=45% Similarity=1.355 Sum_probs=5.1
Q ss_pred CCCCCCCCCCC
Q 044831 6 QNCGYGSSCKC 16 (77)
Q Consensus 6 gnCgCGs~C~C 16 (77)
+.|.||++|+|
T Consensus 9 gtC~Cg~~CsC 19 (26)
T 1t2y_A 9 SSCNCGSGCSC 19 (26)
T ss_dssp TTCCCSSSCCS
T ss_pred ccccCCCCccc
Confidence 34444444444
No 5
>4mt2_A Metallothionein isoform II; 2.00A {Rattus rattus} SCOP: g.46.1.1 PDB: 2mrt_A 1mrt_A 1mhu_A 1dfs_A 2mhu_A 1dft_A 2mrb_A
Probab=38.87 E-value=14 Score=22.24 Aligned_cols=13 Identities=38% Similarity=1.014 Sum_probs=9.7
Q ss_pred CCCCCCCCCCCCC
Q 044831 5 GQNCGYGSSCKCG 17 (77)
Q Consensus 5 ggnCgCGs~C~CG 17 (77)
||.|.|+++|+|-
T Consensus 11 ggsC~C~~sCkCk 23 (62)
T 4mt2_A 11 DGSCSCAGSCKCK 23 (62)
T ss_dssp SSCCCCTTCSCCS
T ss_pred CCcccCCCccccC
Confidence 5778888887774
No 6
>2kak_A EC protein I/II; metallothionein, solution structure, wheat EC-1, Zn binding, metal-binding, metal-thiolate cluster, zinc; NMR {Triticum aestivum}
Probab=36.29 E-value=15 Score=21.45 Aligned_cols=7 Identities=57% Similarity=1.996 Sum_probs=4.9
Q ss_pred CCCCCCC
Q 044831 14 CKCGSDC 20 (77)
Q Consensus 14 C~CGsgC 20 (77)
|+||.+|
T Consensus 35 C~CG~~C 41 (53)
T 2kak_A 35 CSCGAAC 41 (53)
T ss_dssp CCCCSSC
T ss_pred cccCCCc
Confidence 7777666
No 7
>1mrb_A CD7 metallothionein-2A; NMR {Oryctolagus cuniculus} SCOP: g.46.1.1
Probab=27.91 E-value=50 Score=17.30 Aligned_cols=14 Identities=36% Similarity=1.296 Sum_probs=8.1
Q ss_pred CCCCC-CCCCCCCCCc
Q 044831 10 YGSSC-KCGSDCNVCR 24 (77)
Q Consensus 10 CGs~C-~CGsgCggCk 24 (77)
|.++| ||..+| -||
T Consensus 7 CP~gC~kCa~gC-vCK 21 (31)
T 1mrb_A 7 CPPGCAKCAQGC-ICK 21 (31)
T ss_dssp SCTTCSSCSSSC-CCC
T ss_pred Cccchhhhcccc-eEc
Confidence 44555 666766 554
No 8
>1ji9_A Metallothionein-III; 3-10 helix, CD-S cluster, half turn, type II turn, metal binding protein; NMR {Mus musculus} SCOP: g.46.1.1 PDB: 2f5h_A 2fj4_A 2fj5_A
Probab=22.96 E-value=66 Score=17.40 Aligned_cols=14 Identities=50% Similarity=1.426 Sum_probs=8.0
Q ss_pred CCCCC-CCCCCCCCCc
Q 044831 10 YGSSC-KCGSDCNVCR 24 (77)
Q Consensus 10 CGs~C-~CGsgCggCk 24 (77)
|.++| ||..+| -||
T Consensus 7 CP~gC~kCa~gC-vCK 21 (37)
T 1ji9_A 7 CPAGCEKCAKDC-VCK 21 (37)
T ss_dssp SCTTCTTTTTTC-TTC
T ss_pred CccchhHhcccc-eEc
Confidence 44455 666666 554
No 9
>2k84_A P9; HOST-virus interaction, metal-binding, virion, zinc, zinc-finger; NMR {Synthetic}
Probab=20.10 E-value=32 Score=17.86 Aligned_cols=6 Identities=83% Similarity=1.614 Sum_probs=4.8
Q ss_pred cCCCCC
Q 044831 25 MYPDLS 30 (77)
Q Consensus 25 myPDl~ 30 (77)
.||||+
T Consensus 1 LYPDLs 6 (30)
T 2k84_A 1 LYPDLS 6 (30)
T ss_dssp CCCCSC
T ss_pred CCccHH
Confidence 499996
No 10
>1rgx_A Resistin, adipose TISS; hormone, glucose uptake, resistin/FIZZ family, structural GE PSI, protein structure initiative; 1.79A {Mus musculus} SCOP: g.77.1.1 PDB: 1rfx_A*
Probab=19.58 E-value=19 Score=23.90 Aligned_cols=9 Identities=67% Similarity=1.689 Sum_probs=6.6
Q ss_pred CCCCCCCCC
Q 044831 13 SCKCGSDCN 21 (77)
Q Consensus 13 ~C~CGsgCg 21 (77)
+|.||++||
T Consensus 75 gCaCG~aCG 83 (114)
T 1rgx_A 75 SCSCGSACG 83 (114)
T ss_dssp EEEESTTCC
T ss_pred ccccccccc
Confidence 577788775
Done!