Query 044840
Match_columns 128
No_of_seqs 179 out of 1059
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 12:32:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044840.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044840hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aiw_A Golgi-associated plant 100.0 7.8E-43 2.7E-47 238.5 7.0 118 9-128 4-145 (154)
2 1cfe_A Pathogenesis-related pr 100.0 4.2E-42 1.4E-46 230.3 8.9 117 12-128 1-135 (135)
3 1xta_A Natrin 1; crisp, serine 100.0 1.9E-37 6.6E-42 222.8 9.5 122 7-128 7-161 (221)
4 2ddb_A Pseudecin, channel bloc 100.0 1.5E-37 5E-42 221.9 8.4 117 12-128 3-150 (210)
5 1qnx_A VES V 5, antigen 5; all 100.0 8.8E-38 3E-42 222.6 7.1 122 7-128 38-206 (209)
6 1u53_A Secreted protein Asp-2; 100.0 3.1E-37 1.1E-41 217.7 8.7 122 6-128 8-175 (196)
7 2vzn_A Venom allergen 3; major 100.0 5.3E-37 1.8E-41 219.9 7.2 122 7-128 35-208 (218)
8 3q2u_A Glioma pathogenesis-rel 100.0 2.6E-36 8.9E-41 214.3 9.0 119 7-128 11-171 (205)
9 3u3l_C Tablysin 15; CAP domain 100.0 7.8E-36 2.7E-40 215.6 7.1 121 7-128 33-200 (233)
10 3nt8_A Ancylostoma secreted pr 100.0 7.9E-34 2.7E-38 220.0 9.5 119 9-128 232-399 (424)
11 3nt8_A Ancylostoma secreted pr 100.0 1.6E-33 5.6E-38 218.3 10.6 119 9-128 31-189 (424)
12 3s6s_A AC-Asp-7; pathogenesis- 100.0 1.9E-31 6.4E-36 189.4 6.8 103 8-128 12-150 (206)
13 4ifa_A Extracellular protein c 98.9 2.7E-10 9.3E-15 86.0 3.0 90 14-103 220-328 (339)
14 4h0a_A Uncharacterized protein 98.4 1.5E-07 5.3E-12 70.5 3.6 90 14-103 205-312 (323)
15 3plv_C 66 kDa U4/U6.U5 small n 69.9 4.7 0.00016 17.6 2.3 16 19-34 4-19 (21)
16 3ukw_C Bimax1 peptide; arm rep 26.0 22 0.00075 16.0 0.6 14 26-39 4-17 (28)
No 1
>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A*
Probab=100.00 E-value=7.8e-43 Score=238.53 Aligned_cols=118 Identities=27% Similarity=0.589 Sum_probs=102.6
Q ss_pred CCCChhHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHhcccCC--------------CCCC--------Ccccc--cce
Q 044840 9 SRAQDLPQDYVNAHNAARAQVGVNPLKCDESIAAFARSYAKPCG--------------SSGN--------LSGAD--GLW 64 (128)
Q Consensus 9 ~~~~~~~~~iL~~HN~~R~~~~m~~L~Wd~~La~~A~~~a~~C~--------------~~g~--------~~~~~--~~W 64 (128)
+.+++++++||+.||.+|+.|++++|+||.+|++.||.||+.|. ..|+ .++.+ +.|
T Consensus 4 s~~~~f~~~iL~~HN~~R~~~~~~~L~wd~~La~~Aq~~A~~~a~~~~~~hs~~~~~~~~GeNl~~~~~~~~~~~~v~~W 83 (154)
T 4aiw_A 4 SASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWASYDQTGKEVADRW 83 (154)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHTCCCCCHHHHTTSSEEEEEEESSCCCHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHcCCCcccccHHHHHHHHHHHHHhhhcccccccccCCCCCCCeeeEecCCCCCHHHHHHHH
Confidence 45678999999999999999999999999999999999998643 1122 12222 899
Q ss_pred ecccccCCCCCCCCCCCccchhHHHHHHhcCCeEeEEEEEeCCCCEEEEEEccCCCCCCCCCCC
Q 044840 65 VSEKDDYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFIGCNYASPGDVVGQKPY 128 (128)
Q Consensus 65 ~~e~~~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~vC~Y~p~GN~~g~~~Y 128 (128)
|+|..+|+|..+.+.. .+||||||||++|++||||++.|.++..++||+|+|+||+.|+.||
T Consensus 84 ~~E~~~y~~~~~~~~~--~~gHfTQ~VW~~t~~vGCg~a~c~~~~~~vVC~Y~P~GN~~g~~~y 145 (154)
T 4aiw_A 84 YSEIKNYNFQQPGFTS--GTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFF 145 (154)
T ss_dssp HGGGGGCCTTSCSCCT--TTHHHHHHHCTTCCEEEEEEEECTTSCEEEEEEEESCCCCCSTTHH
T ss_pred HHHhhhcccCCCCcCC--CcCCeeeeehhhhceeeeEEEEcCCCCEEEEEEEeCCCccCCccch
Confidence 9999999999988864 4999999999999999999999999889999999999999998776
No 2
>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1
Probab=100.00 E-value=4.2e-42 Score=230.26 Aligned_cols=117 Identities=55% Similarity=1.085 Sum_probs=104.6
Q ss_pred ChhHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHhcc----cCC---CC-CC--------Ccccc--cceecccccCCC
Q 044840 12 QDLPQDYVNAHNAARAQVGVNPLKCDESIAAFARSYAK----PCG---SS-GN--------LSGAD--GLWVSEKDDYDY 73 (128)
Q Consensus 12 ~~~~~~iL~~HN~~R~~~~m~~L~Wd~~La~~A~~~a~----~C~---~~-g~--------~~~~~--~~W~~e~~~y~~ 73 (128)
+++++.||+.||.+|+.|+|++|+||++|+..||.||+ +|. +. |+ .++.+ +.|++|..+|+|
T Consensus 1 ~~~~~~iL~~HN~~R~~~~~~~L~Wd~~La~~Aq~~A~~~a~~c~~~hs~~GENla~~~~~~~~~~~v~~W~~E~~~y~~ 80 (135)
T 1cfe_A 1 QNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGAGENLAKGGGDFTGRAAVQLWVSERPSYNY 80 (135)
T ss_dssp CCSHHHHHHHHHHHHHHTTCCCCEECSHHHHHHHHHHHHHTTTCCSCSCSSSBCCEECSSSCCHHHHHHHHHTTGGGEEG
T ss_pred CcHHHHHHHHHHHHHHHcCCCccCcCHHHHHHHHHHHHHHhcCCCcccCCCCeEEEEecCCCCHHHHHHHHHhHHhhCCC
Confidence 35789999999999999999999999999999999999 786 11 43 12222 899999999999
Q ss_pred CCCCCCCCccchhHHHHHHhcCCeEeEEEEEeCCCCEEEEEEccCCCCCCCCCCC
Q 044840 74 NSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFIGCNYASPGDVVGQKPY 128 (128)
Q Consensus 74 ~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~vC~Y~p~GN~~g~~~Y 128 (128)
..+.+..++.++|||||||++|++||||++.|.++..++||+|+|+||+.|++||
T Consensus 81 ~~~~~~~~~~~gHfTQ~vW~~t~~vGCa~~~c~~~~~~~VC~Y~p~GN~~g~~pY 135 (135)
T 1cfe_A 81 ATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQRPY 135 (135)
T ss_dssp GGTEECSSSCCSSHHHHHCTTCCEEEEEEEECTTSSEEEEEECSSCCSCTTSCCC
T ss_pred CCCCcCCCCcccceeeeEEccCcEEeEEEEEeCCCCEEEEEEEeCCCCCCCCCCC
Confidence 9988877778999999999999999999999988789999999999999999999
No 3
>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A
Probab=100.00 E-value=1.9e-37 Score=222.77 Aligned_cols=122 Identities=30% Similarity=0.634 Sum_probs=105.2
Q ss_pred CCCCCChhHHHHHHHHHHHHhhcC-----CCCCccCHHHHHHHHHhcccCC---C-----------CCC---C-----cc
Q 044840 7 LPSRAQDLPQDYVNAHNAARAQVG-----VNPLKCDESIAAFARSYAKPCG---S-----------SGN---L-----SG 59 (128)
Q Consensus 7 ~~~~~~~~~~~iL~~HN~~R~~~~-----m~~L~Wd~~La~~A~~~a~~C~---~-----------~g~---~-----~~ 59 (128)
....++++++.||+.||.+|+.|+ |++|+||++||+.||.||++|. + .|+ + +.
T Consensus 7 l~~~~~~~~~~iL~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~~C~~~Hs~~~~r~~~~~~~GENl~~~~~~~~~ 86 (221)
T 1xta_A 7 ESTRRKKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWANTCSLNHSPDNLRVLEGIQCGESIYMSSNARTW 86 (221)
T ss_dssp GCTTSHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHTTTCCSCCCGGGCEETTEECEEEEEEESSCCCH
T ss_pred hcCCCHHHHHHHHHHHHHHHHhcCCccccCccCccCHHHHHHHHHHHhcCCCCCcCccccccCCCCCceEEEeecCCCCH
Confidence 445667899999999999999996 7799999999999999999998 1 122 0 11
Q ss_pred cc--cceecccccCCCCCCCCCCCccchhHHHHHHhcCCeEeEEEEEeCCC--CEEEEEEccCCCCCCCC--CCC
Q 044840 60 AD--GLWVSEKDDYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNG--GTFIGCNYASPGDVVGQ--KPY 128 (128)
Q Consensus 60 ~~--~~W~~e~~~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~--~~~~vC~Y~p~GN~~g~--~~Y 128 (128)
.+ +.||+|..+|+|..+.+..+..+||||||||++|++||||++.|..+ .+++||+|+|+||+.|+ +||
T Consensus 87 ~~av~~W~~E~~~y~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~VC~Y~P~GN~~g~~~~pY 161 (221)
T 1xta_A 87 TEIIHLWHDEYKNFVYGVGASPPGSVTGHYTQIVWYQTYRAGCAVSYCPSSAWSYFYVCQYCPSGNFQGKTATPY 161 (221)
T ss_dssp HHHHHHHHGGGGGEETTTEESSTTCCCHHHHHHTCTTCCEEEEEEEECTTSSSSEEEEEEEESCCCCTTTTTCSS
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCchhHHHHHHHHhcCEeeEEEEEcCCCCccEEEEEEEeCCcCCCCCcCCCc
Confidence 12 89999999999998776666789999999999999999999999874 68999999999999999 898
No 4
>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A
Probab=100.00 E-value=1.5e-37 Score=221.88 Aligned_cols=117 Identities=32% Similarity=0.650 Sum_probs=101.7
Q ss_pred ChhHHHHHHHHHHHHhhcC-----CCCCccCHHHHHHHHHhcccCC---C-----------CCC---C-----cccc--c
Q 044840 12 QDLPQDYVNAHNAARAQVG-----VNPLKCDESIAAFARSYAKPCG---S-----------SGN---L-----SGAD--G 62 (128)
Q Consensus 12 ~~~~~~iL~~HN~~R~~~~-----m~~L~Wd~~La~~A~~~a~~C~---~-----------~g~---~-----~~~~--~ 62 (128)
+++++.||+.||.+|+.|+ |++|+||++||..||.||++|. + .|+ + +..+ +
T Consensus 3 ~~~~~~iL~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~~C~~~Hs~~~~r~~~~~~~GENl~~~~~~~~~~~av~ 82 (210)
T 2ddb_A 3 KNYQKEIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWADRCTFAHSPPNTRTVGKLRCGENIFMSSQPFPWSGVVQ 82 (210)
T ss_dssp -CHHHHHHHHHHHHHTTCSSCBSSCBCCEECHHHHHHHHHHHTTTCCSCCCGGGSEETTEECEEEEEEESSCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCccccCcccccCHHHHHHHHHHHhcCCCCCCCccccccCCCCCcceEEEEcCCCCHHHHHH
Confidence 5689999999999999996 7799999999999999999998 1 122 0 1112 8
Q ss_pred ceecccccCCCCCCCCCCCccchhHHHHHHhcCCeEeEEEEEeCCCCEEEEEEccCCCCCCCC--CCC
Q 044840 63 LWVSEKDDYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFIGCNYASPGDVVGQ--KPY 128 (128)
Q Consensus 63 ~W~~e~~~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~vC~Y~p~GN~~g~--~~Y 128 (128)
.||+|..+|+|..+.+..+..++|||||||++|++||||++.|..+.+++||+|+|+||+.|+ +||
T Consensus 83 ~W~~E~~~y~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~VC~Y~P~GN~~g~~~~pY 150 (210)
T 2ddb_A 83 AWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLIGCASAKCSSSKYLYVCQYCPAGNIRGSIATPY 150 (210)
T ss_dssp HHHGGGGGEETTTEESSTTSCCHHHHHHTCTTCCEEEEEEEEEETTEEEEEEEEESCSSSTTCTTCSS
T ss_pred HHHHHhhhCCCCCCCCCCCCcccchhhhhhhhccEeeEEEEEcCCCCEEEEEEeeCCCCCCCCccCCC
Confidence 999999999999876666678999999999999999999999988778999999999999999 898
No 5
>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1
Probab=100.00 E-value=8.8e-38 Score=222.63 Aligned_cols=122 Identities=25% Similarity=0.528 Sum_probs=101.4
Q ss_pred CCCCCChhHHHHHHHHHHHHhhcC-----------------CCCCccCHHHHHHHHHhcccCC---C---------CCC-
Q 044840 7 LPSRAQDLPQDYVNAHNAARAQVG-----------------VNPLKCDESIAAFARSYAKPCG---S---------SGN- 56 (128)
Q Consensus 7 ~~~~~~~~~~~iL~~HN~~R~~~~-----------------m~~L~Wd~~La~~A~~~a~~C~---~---------~g~- 56 (128)
...+++++++.||+.||.+|+.|+ |++|+||++||..||.||++|. + .|+
T Consensus 38 ~~~l~~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~~m~~L~Wd~~La~~Aq~~A~~C~~~h~~~~~~~~~~~GeN 117 (209)
T 1qnx_A 38 SYGLTKQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWANQCQYGHDTCRDVAKYQVGQN 117 (209)
T ss_dssp EESCCHHHHHHHHHHHHHHHHHHHTTCCCCSTTCCCCCBSSCCCCEECHHHHHHHHHHHTTCCCSCCSCCCCSSSCCEEE
T ss_pred ecCCCHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCccccccccccCHHHHHHHHHHHhcCcccCCCccCCCCCCCccE
Confidence 446778899999999999999983 8899999999999999999997 1 122
Q ss_pred --C---------cccc--cceecccccCCCCCCCCC-CCccchhHHHHHHhcCCeEeEEEEEeCCC---CEEEEEEccCC
Q 044840 57 --L---------SGAD--GLWVSEKDDYDYNSNSCN-AGKVCGHYTHVVWRNSVRIGCAKVRCNNG---GTFIGCNYASP 119 (128)
Q Consensus 57 --~---------~~~~--~~W~~e~~~y~~~~~~~~-~~~~~~hftq~vw~~t~~vGCa~~~c~~~---~~~~vC~Y~p~ 119 (128)
+ ++.+ +.||+|..+|+|..+... ....++|||||||++|++||||++.|..+ ..++||+|+|+
T Consensus 118 l~~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~~VC~Y~P~ 197 (209)
T 1qnx_A 118 VALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPS 197 (209)
T ss_dssp EEEEEESSSCCCCHHHHHHHHHGGGGGCCTTSCGGGSCHHHHHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEEESC
T ss_pred EEEecccCCCcccHHHHHHHHHHhhhhcCCccCCCCCCCCcccchhhhhhhcCcEeeeEEEEEeCCCceeEEEEEEeCCC
Confidence 0 1112 889999999999864221 12469999999999999999999999764 36899999999
Q ss_pred CCCCCCCCC
Q 044840 120 GDVVGQKPY 128 (128)
Q Consensus 120 GN~~g~~~Y 128 (128)
||+.|++||
T Consensus 198 GN~~g~~~Y 206 (209)
T 1qnx_A 198 GNFKNEELY 206 (209)
T ss_dssp CCCTTSCSS
T ss_pred CCCCCCCCC
Confidence 999999998
No 6
>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus}
Probab=100.00 E-value=3.1e-37 Score=217.71 Aligned_cols=122 Identities=25% Similarity=0.546 Sum_probs=103.4
Q ss_pred cCCCCCChhHHHHHHHHHHHHhhcC-----------------CCCCccCHHHHHHHHHhcccCC---C-------CCC--
Q 044840 6 ALPSRAQDLPQDYVNAHNAARAQVG-----------------VNPLKCDESIAAFARSYAKPCG---S-------SGN-- 56 (128)
Q Consensus 6 ~~~~~~~~~~~~iL~~HN~~R~~~~-----------------m~~L~Wd~~La~~A~~~a~~C~---~-------~g~-- 56 (128)
....+++++++.||+.||.+|+.|+ |++|+||++||..||.||++|. + .|+
T Consensus 8 ~~~~lt~~~~~~iL~~HN~~R~~~a~G~~~~~~g~~~p~A~nM~~L~Wd~~La~~Aq~~A~~C~~~h~~~~~~~~~GeNl 87 (196)
T 1u53_A 8 PDNGMSEEARQKFLEMHNSLRSSVALGQAKDGAGGNAPKAAKMKTMAYDCEVEKTAMNNAKQCVFKHSQPNQRKGLGENI 87 (196)
T ss_dssp CSSSCCHHHHHHHHHHHHHHHHHHHTTCCBCTTSSBCCCBSSCBCCEECHHHHHHHHHHHTTCCCCCCCGGGSTTCEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhCCCcccCCCCcCCccccchhcccCHHHHHHHHHHHHhCccCCCccccCCCCCeEE
Confidence 3457888899999999999999982 6799999999999999999998 1 122
Q ss_pred -C------c----ccc--cceecccccCCCCC-CCCC---CCccchhHHHHHHhcCCeEeEEEEEeCCCCEEEEEEccCC
Q 044840 57 -L------S----GAD--GLWVSEKDDYDYNS-NSCN---AGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFIGCNYASP 119 (128)
Q Consensus 57 -~------~----~~~--~~W~~e~~~y~~~~-~~~~---~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~vC~Y~p~ 119 (128)
+ + +.+ +.||+|..+|+|.. +.+. .+..++|||||||++|++||||++.|.+ ..++||+|+|+
T Consensus 88 ~~~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~~~~~ghfTQ~VW~~t~~vGCa~~~c~~-~~~~VC~Y~p~ 166 (196)
T 1u53_A 88 FMSSDSGMDKAKAAEQASKAWFGELAEKGVGQNLKLTGGLFSRGVGHYTQMVWQETVKLGCYVEACSN-MCYVVCQYGPA 166 (196)
T ss_dssp EEESCTTCCHHHHHHHHHHHHHTHHHHHCCCSCCBCCHHHHTTTCHHHHHHTCTTCCEEEEEEEECSS-CEEEEEEEESC
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHcCCCcccccCccccCccccchheeeecccCEEeeEEEEeCC-CEEEEEEeCCC
Confidence 0 0 112 88999999999987 5443 2456999999999999999999999987 59999999999
Q ss_pred CCCCCCCCC
Q 044840 120 GDVVGQKPY 128 (128)
Q Consensus 120 GN~~g~~~Y 128 (128)
||+.|++||
T Consensus 167 GN~~g~~~Y 175 (196)
T 1u53_A 167 GNMMGKDIY 175 (196)
T ss_dssp CCCTTSBSS
T ss_pred CCCCCCcCC
Confidence 999999998
No 7
>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta}
Probab=100.00 E-value=5.3e-37 Score=219.88 Aligned_cols=122 Identities=30% Similarity=0.569 Sum_probs=100.3
Q ss_pred CCCCCChhHHHHHHHHHHHHhhcC-----------------CCCCccCHHHHHHHHHhcccCC---C---------CCC-
Q 044840 7 LPSRAQDLPQDYVNAHNAARAQVG-----------------VNPLKCDESIAAFARSYAKPCG---S---------SGN- 56 (128)
Q Consensus 7 ~~~~~~~~~~~iL~~HN~~R~~~~-----------------m~~L~Wd~~La~~A~~~a~~C~---~---------~g~- 56 (128)
...+++++++.||+.||.+|+.|+ |++|+||++||+.||.||++|. + .|+
T Consensus 35 ~~~~t~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~~m~~L~Wd~~La~~Aq~~A~~C~~~Hs~c~~~~~~~~GeN 114 (218)
T 2vzn_A 35 NVGFTDAEKDAIVNKHNELRQRVASGKEMRGTNGPQPPAVKMPNLTWDPELATIAQRWANQCTFEHDACRNVERFAVGQN 114 (218)
T ss_dssp CCSCCHHHHHHHHHHHHHHHHHHHTTCCCCCTTSCCCCBSCCCCCEECHHHHHHHHHHHTTCCSSCCSCCCCSSSCCEEE
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCchhhchhccCCHHHHHHHHHHHHhCCcCCCCCCCCccCCCceE
Confidence 356778899999999999999983 8899999999999999999997 1 122
Q ss_pred --C---c------ccc--cceecccccCCCCCC-C--CC--CCccchhHHHHHHhcCCeEeEEEEEeCC-C---CEEEEE
Q 044840 57 --L---S------GAD--GLWVSEKDDYDYNSN-S--CN--AGKVCGHYTHVVWRNSVRIGCAKVRCNN-G---GTFIGC 114 (128)
Q Consensus 57 --~---~------~~~--~~W~~e~~~y~~~~~-~--~~--~~~~~~hftq~vw~~t~~vGCa~~~c~~-~---~~~~vC 114 (128)
+ + ..+ +.||+|..+|+|... . .. ....++|||||||++|++||||++.|.. + ..++||
T Consensus 115 l~~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~~vVC 194 (218)
T 2vzn_A 115 IAATSSSGKNKSTPNEMILLWYNEVKDFDNRWISSFPSDDNILMKVGHYTQIVWAKTTKIGCGRIMFKEPDNWTKHYLVC 194 (218)
T ss_dssp EEEEEECC-CCCCHHHHHHHHHGGGGGCCGGGSSSCCCCHHHHHHHHHHHHHTCTTCCEEEEEEEEEECTTSCEEEEEEE
T ss_pred EEEEeccCCccchHHHHHHHHHHHHHhcCcccccCCCCCcccCCCcchHHHHHHHhcCEEeEEEEEEeCCCCeEEEEEEE
Confidence 0 0 112 889999999999842 1 11 1246899999999999999999999976 3 469999
Q ss_pred EccCCCCCCCCCCC
Q 044840 115 NYASPGDVVGQKPY 128 (128)
Q Consensus 115 ~Y~p~GN~~g~~~Y 128 (128)
+|+|+||+.|++||
T Consensus 195 ~Y~P~GN~~g~~~y 208 (218)
T 2vzn_A 195 NYGPAGNVLGAPIY 208 (218)
T ss_dssp EEESCCCCTTSCSS
T ss_pred EECCCCCCCCCccc
Confidence 99999999999998
No 8
>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A
Probab=100.00 E-value=2.6e-36 Score=214.32 Aligned_cols=119 Identities=35% Similarity=0.715 Sum_probs=100.6
Q ss_pred CCCCCChhHHHHHHHHHHHHhhcC-----CCCCccCHHHHHHHHHhcccCC---C---------------CCC-------
Q 044840 7 LPSRAQDLPQDYVNAHNAARAQVG-----VNPLKCDESIAAFARSYAKPCG---S---------------SGN------- 56 (128)
Q Consensus 7 ~~~~~~~~~~~iL~~HN~~R~~~~-----m~~L~Wd~~La~~A~~~a~~C~---~---------------~g~------- 56 (128)
+....++++++||+.||.+|+.|. |.+|+||++||..||.||++|. + .|+
T Consensus 11 p~~~~~~f~~~~L~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~~C~~~h~~~~~~~~~~~~~~~~~GeNl~~~~~ 90 (205)
T 3q2u_A 11 PDIENEDFIKDCVRIHNKFRSEVKPTASDMLYMTWDPALAQIAKAWASNCQFSHNTRLKPPHKLHPNFTSLGENIWTGSV 90 (205)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHTTCBSSCCTTSSTTCCSSTTCSSCEEEEEEEET
T ss_pred CCCCCHHHHHHHHHHHHHHHHhcCCCcccCccCccCHHHHHHHHHHHHhCCCCCCccccccccccCCCCCCceEEEEccC
Confidence 444457799999999999999996 7899999999999999999997 1 111
Q ss_pred --Ccccc--cceecccccCCCCCCCCCCCccchhHHHHHHhcCCeEeEEEEEeCC--------CCEEEEEEccCCCCCCC
Q 044840 57 --LSGAD--GLWVSEKDDYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNN--------GGTFIGCNYASPGDVVG 124 (128)
Q Consensus 57 --~~~~~--~~W~~e~~~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~--------~~~~~vC~Y~p~GN~~g 124 (128)
+++.+ +.||+|..+|+|..+.+. ..++|||||||++|++||||++.|.. ...++||+|+|+||+ +
T Consensus 91 ~~~~~~~~v~~W~~E~~~y~~~~~~~~--~~~gHfTQ~VW~~t~~vGCa~~~c~~~~g~~~~~~~~~~VC~Y~P~GN~-~ 167 (205)
T 3q2u_A 91 PIFSVSSAITNWYDEIQDYDFKTRICK--KVCGHYTQVVWADSYKVGCAVQFCPKVSGFDALSNGAHFICNYGPGGNY-P 167 (205)
T ss_dssp TTCCHHHHHHHHHGGGGGEETTTTEES--SCCHHHHHHTCTTCCEEEEEEEEESCCBTCSSCCSEEEEEEEEESCCCC-S
T ss_pred CCCCHHHHHHHHHhHHHhcCCCCCCcc--chhHHHHHHHhhcccEeeeEEEEcCCCcCcccccccEEEEEEEECCCCc-C
Confidence 01112 889999999999987764 56999999999999999999999985 247999999999999 8
Q ss_pred CCCC
Q 044840 125 QKPY 128 (128)
Q Consensus 125 ~~~Y 128 (128)
+.||
T Consensus 168 ~~pY 171 (205)
T 3q2u_A 168 TWPY 171 (205)
T ss_dssp SCSS
T ss_pred CCCC
Confidence 8888
No 9
>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C*
Probab=100.00 E-value=7.8e-36 Score=215.64 Aligned_cols=121 Identities=17% Similarity=0.302 Sum_probs=99.2
Q ss_pred CCCCCChhHHHHHHHHHHHHhhc-----------CCCCCccCHHHHHHHHHhcccCC---C----------CCC----Cc
Q 044840 7 LPSRAQDLPQDYVNAHNAARAQV-----------GVNPLKCDESIAAFARSYAKPCG---S----------SGN----LS 58 (128)
Q Consensus 7 ~~~~~~~~~~~iL~~HN~~R~~~-----------~m~~L~Wd~~La~~A~~~a~~C~---~----------~g~----~~ 58 (128)
...+++++++.||+.||.+|+.| .|++|+||++||..||.||++|. + .|+ ++
T Consensus 33 ~~~~s~~~~~~il~~HN~~R~~va~G~~~~P~A~nM~~L~Wd~~La~~Aq~~a~~C~~~h~~c~~~~~~~~~Gen~~~~~ 112 (233)
T 3u3l_C 33 TRELLKEHRNEILSKINDVRDHVAKGSWGLPVAARMKVVVWDAELAGLAKRHTKGCVGETHACRNTERFWLPGQLNFKYS 112 (233)
T ss_dssp ECCCCHHHHHHHHHHHHHHHHHHHTTCTTCCCBSSCBCCEECHHHHHHHHHHHTTCCSCCCCBCCCSSCSSCEEEEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHHHHHHcCCCCCCccccCCccEECHHHHHHHHHHHHhCCCCCCcccccCcCCcCeEEEEEec
Confidence 34577889999999999999999 49999999999999999999997 1 122 01
Q ss_pred c----------cc--cceecccccCCCCC----CCCCCCccchhHHHHHHhcCCeEeEEEEEeCCC---CEEEEEEccCC
Q 044840 59 G----------AD--GLWVSEKDDYDYNS----NSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNG---GTFIGCNYASP 119 (128)
Q Consensus 59 ~----------~~--~~W~~e~~~y~~~~----~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~---~~~~vC~Y~p~ 119 (128)
+ .+ +.||+|..+|++.. +....++.++|||||||++|++||||++.|..+ .+++||+|+|
T Consensus 113 ~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~~~~gHfTQmVW~~t~~vGCa~~~c~~~~~~~~~~VC~Y~p- 191 (233)
T 3u3l_C 113 GDKLPRIKELIDDAVKKGHLQKHNITREIIENYRENGPNGDVKELALAISDRVTAVGCGLTTWEDGAKARALLTCNFSS- 191 (233)
T ss_dssp ESSCCCHHHHHHHHHHHHHGGGGTCCHHHHHSCCSCC--CCCHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEESC-
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhhhCHHHHhcCCCcccccchhhhHHHhhhcCCeeeeEEEEEEcCCeeEEEEEEECCC-
Confidence 1 11 78999999998652 122234679999999999999999999999764 4799999997
Q ss_pred CCCCCCCCC
Q 044840 120 GDVVGQKPY 128 (128)
Q Consensus 120 GN~~g~~~Y 128 (128)
||+.|++||
T Consensus 192 GN~~g~~~Y 200 (233)
T 3u3l_C 192 QNTRGRPVY 200 (233)
T ss_dssp CCCTTSCSS
T ss_pred CCCCCCcee
Confidence 999999998
No 10
>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}
Probab=100.00 E-value=7.9e-34 Score=220.04 Aligned_cols=119 Identities=27% Similarity=0.540 Sum_probs=100.8
Q ss_pred CCCChhHHHHHHHHHHHHhhcC-----------------CCCCccCHHHHHHHHHhcccCC---C-------CCC-----
Q 044840 9 SRAQDLPQDYVNAHNAARAQVG-----------------VNPLKCDESIAAFARSYAKPCG---S-------SGN----- 56 (128)
Q Consensus 9 ~~~~~~~~~iL~~HN~~R~~~~-----------------m~~L~Wd~~La~~A~~~a~~C~---~-------~g~----- 56 (128)
.+++++++.||+.||.+|+.|+ |.+|+||++||+.||.||++|. + .|+
T Consensus 232 ~~~~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~nM~~L~Wd~~La~~Aq~~a~~C~~~h~~~~~~~~~GeNl~~~ 311 (424)
T 3nt8_A 232 GMTDSVRDTFLSVHNEFRSSVARGLEPDALGGNAPKAAKMLKMVYDCEVEASAIRHGNKCVYQHSHGEDRPGLGENIYKT 311 (424)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHTTCSBCTTSSBCCCBSSCBCCEECHHHHHHHHHHHTTCCSSCCCTTTSTTCEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCCCCchhceEhHHHHHHHHHHHHhCcccCCCccccCccceeEEec
Confidence 6778899999999999999985 5599999999999999999998 1 122
Q ss_pred ----Cc----ccc--cceecccccCCCCCCC-C------CCCccchhHHHHHHhcCCeEeEEEEEeCCCCEEEEEEccCC
Q 044840 57 ----LS----GAD--GLWVSEKDDYDYNSNS-C------NAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFIGCNYASP 119 (128)
Q Consensus 57 ----~~----~~~--~~W~~e~~~y~~~~~~-~------~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~vC~Y~p~ 119 (128)
.+ ..+ +.||+|..+|+|.... + ..+..++|||||||++|++||||++.|.++ .++||+|+|+
T Consensus 312 ~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~-~~~VC~Y~p~ 390 (424)
T 3nt8_A 312 SVLKFDKNKAAKQASQLWWNELKEYGVGPSNVLTTALWNRPNMQIGHYTQMAWDTTYKLGCAVVFCNDF-TFGVCQYGPG 390 (424)
T ss_dssp SSTTCCHHHHHHHHHHHHHTHHHHTCCCTTCBCCHHHHTCTTCCCHHHHHHHCTTCCEEEEEEEECSSS-EEEEEEEESC
T ss_pred ccCCCchHHHHHHHHHHHHHHHHhcCCCCCcccccccccCCCCcccchHHHhhhhcceeeeEEEEeCCC-eEEEEEecCC
Confidence 00 112 8999999999987543 1 134579999999999999999999999876 8999999999
Q ss_pred CCCCCCCCC
Q 044840 120 GDVVGQKPY 128 (128)
Q Consensus 120 GN~~g~~~Y 128 (128)
||+.|++||
T Consensus 391 GN~~g~~~Y 399 (424)
T 3nt8_A 391 GNYMGHVIY 399 (424)
T ss_dssp CCCTTSBSS
T ss_pred CCcCCCCCC
Confidence 999999998
No 11
>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}
Probab=100.00 E-value=1.6e-33 Score=218.28 Aligned_cols=119 Identities=18% Similarity=0.331 Sum_probs=101.7
Q ss_pred CCCChhHHHHHHHHHHHHhhc----------------CCCCCccCHHHHHHHHHhcccCC-------CCCC---------
Q 044840 9 SRAQDLPQDYVNAHNAARAQV----------------GVNPLKCDESIAAFARSYAKPCG-------SSGN--------- 56 (128)
Q Consensus 9 ~~~~~~~~~iL~~HN~~R~~~----------------~m~~L~Wd~~La~~A~~~a~~C~-------~~g~--------- 56 (128)
.+++++|+.||+.||++|+.| .|++|+||++||..||.||++|. ..|+
T Consensus 31 ~~~~~~~~~il~~HN~~R~~~A~G~~~~~~~~~p~A~nM~~L~Wd~eLa~~Aq~~a~~C~~~h~~~~~~GeNl~~~~~~~ 110 (424)
T 3nt8_A 31 GITDSDRQAFLDFHNNARRRVAKGLEDSNSGKLNPAKNMYKLSWDCAMEQQLQDAIQSCPSGFAGIQGVAQNTMSWSSSG 110 (424)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHTTCCBCSSSBCCCEESCBCCEECHHHHHHHHHHCTTCCSSCCCCTTCEEEEEEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHhCCcccCCCCCCcccccCCccccCHHHHHHHHHHHhhCCCcCCCCCCceeeEEeccccC
Confidence 566789999999999999999 28899999999999999999998 1222
Q ss_pred -C-cc----cc--cceecccccCCCCCCCCCCCccchhHHHHHHhcCCeEeEEEEEeCCCCEEEEEEccCCCCCCCCCCC
Q 044840 57 -L-SG----AD--GLWVSEKDDYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFIGCNYASPGDVVGQKPY 128 (128)
Q Consensus 57 -~-~~----~~--~~W~~e~~~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~vC~Y~p~GN~~g~~~Y 128 (128)
. ++ .+ +.||+|.++|++.......+..++|||||||++|++||||++.|.. .+++||+|+|+||+.|++||
T Consensus 111 ~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~ghfTqmvw~~t~~vGCa~~~c~~-~~~~VC~Y~p~GN~~g~~~Y 189 (424)
T 3nt8_A 111 GYPDPSVKIEPTLSGWWSGAKKNGVGPDNKYTGGGLFAFSNMVYSETTKLGCAYKVCGT-KLAVSCIYNGVGYITNQPMW 189 (424)
T ss_dssp CCSCGGGGHHHHHHHHHTHHHHHCCCTTCBCCCTTCHHHHHHHCTTCCEEEEEEEEETT-EEEEEEEESSCCCSTTCBSS
T ss_pred CcCCHHHHHHHHHHHHHHHHHHcCCcccccCCCcchHHHHHHHHHhcCeeceEEEEeCC-cEEEEEEECCCCCccccccc
Confidence 0 11 12 8899999999998644444457999999999999999999999987 69999999999999999998
No 12
>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A
Probab=99.97 E-value=1.9e-31 Score=189.36 Aligned_cols=103 Identities=17% Similarity=0.114 Sum_probs=85.9
Q ss_pred CCCCChhHHHHHHHHHHHHhhcC------------CCCCccCHHHHHHHHHhcccCCCC----CC----Cc-------cc
Q 044840 8 PSRAQDLPQDYVNAHNAARAQVG------------VNPLKCDESIAAFARSYAKPCGSS----GN----LS-------GA 60 (128)
Q Consensus 8 ~~~~~~~~~~iL~~HN~~R~~~~------------m~~L~Wd~~La~~A~~~a~~C~~~----g~----~~-------~~ 60 (128)
..+++++|+.||+.||.+|+.++ |.+|+||++||..||.||+ |... |+ ++ ..
T Consensus 12 ~~lt~~~~~~il~~HN~~R~~va~G~~~~~p~A~nM~~l~Wd~eLa~~Aq~~A~-C~~~~~~~GeNl~~~sg~~~~~~~~ 90 (206)
T 3s6s_A 12 CMVDRPFREAIDTFHNGLRQRIAKGEAEGYGPAREMYGLVYDCGLEEEARKEIK-LPGYADLHHRGVTRFSGDYEGSAIS 90 (206)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHTTCSTTSCSCCCCBCCEEEHHHHHHHHHHHH-STTHHHHTTCEEEEEEEECSSCHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhCCCCCCCcchhhcCcCCchHHHHHHHHHhhc-CCCCCCCCCcEEEEecCCCCccchh
Confidence 46788899999999999999874 7789999999999999999 9811 22 11 01
Q ss_pred --c--cceecccccCCCCCCCCCCCccchhHHHHHHhcCCeEeEEEEEeC----CC-CEEEEEEccCCCCCCCCCCC
Q 044840 61 --D--GLWVSEKDDYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCN----NG-GTFIGCNYASPGDVVGQKPY 128 (128)
Q Consensus 61 --~--~~W~~e~~~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~----~~-~~~~vC~Y~p~GN~~g~~~Y 128 (128)
+ +.||+| .++|||||||++|++||||++.|. .+ .+++||+|+|+| .|++||
T Consensus 91 ~~~av~~W~~E---------------~~gHfTQmVW~~Tt~VGCa~~~C~~~~~~~~~~~vVCnY~p~G--~g~~~Y 150 (206)
T 3s6s_A 91 ALKEILETFSA---------------DKNSMRQVVYPKATRFGCSGRLRRNKKTGMRRMDWVCVYDKKP--KDGESF 150 (206)
T ss_dssp HHHHHHHHHTT---------------CHHHHHHHHCTTCCEEEEEEEECC-------EEEEEEEESCCC--CTTCCC
T ss_pred HHHHHHHHHhh---------------hhhhHHHHHHHhhceeeEEEEEecCcCCCCceEEEEEEeCCCC--CCCCCc
Confidence 2 678877 389999999999999999999996 22 589999999998 899998
No 13
>4ifa_A Extracellular protein containing A SCP domain; vaccine candi virulence, pathogenesis, center for structural genomics of infectious diseases; HET: MSE; 1.50A {Bacillus anthracis}
Probab=98.95 E-value=2.7e-10 Score=85.99 Aligned_cols=90 Identities=14% Similarity=0.061 Sum_probs=62.2
Q ss_pred hHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHhcccCCCCCC--------Ccccc------c--ceecccccCCCCCCC
Q 044840 14 LPQDYVNAHNAARAQVGVNPLKCDESIAAFARSYAKPCGSSGN--------LSGAD------G--LWVSEKDDYDYNSNS 77 (128)
Q Consensus 14 ~~~~iL~~HN~~R~~~~m~~L~Wd~~La~~A~~~a~~C~~~g~--------~~~~~------~--~W~~e~~~y~~~~~~ 77 (128)
+.+++|++||.+|..++++||+||..|++.|+.+|+.....+. -++.+ - .-+.|...+.+.+..
T Consensus 220 ~e~~vl~lvN~~Ra~~Gl~pL~~d~~L~~aAq~hA~dMa~~~~fsH~~~~G~~~~~R~~~~G~~~~~~GENIA~G~~s~~ 299 (339)
T 4ifa_A 220 NMQQIFDLTNIIRSRHNLPLLAWDQQTADVAIGHSKDMKDNNYFSHDSPTLGTLGDRLQRGKVGFQLAGENIAAQHSDGV 299 (339)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHTCCSSSBTTTBCHHHHHHHTTCCCSEEEEEEEESCSSHH
T ss_pred HHHHHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHHHHhhcCCeecCCCCCCCHHHHHHHcCCCcCceeEEEEEeCCCHH
Confidence 4678999999999999999999999999999999986441000 01111 1 123444444433211
Q ss_pred CC--C-CccchhHHHHHHhcCCeEeEEEE
Q 044840 78 CN--A-GKVCGHYTHVVWRNSVRIGCAKV 103 (128)
Q Consensus 78 ~~--~-~~~~~hftq~vw~~t~~vGCa~~ 103 (128)
-. . -...||+.+|+|...+.||+|+.
T Consensus 300 ~av~~WmnSpGHr~NIL~~~~t~iGvGv~ 328 (339)
T 4ifa_A 300 AALQGWLNSEGHRKNLLNEQFTGLGVGVY 328 (339)
T ss_dssp HHHHHHHTSHHHHHHHTCTTCCEEEEEEE
T ss_pred HHHHHHhCCHhHHHHHhCCCCCEEEEEEE
Confidence 00 0 12479999999999999999987
No 14
>4h0a_A Uncharacterized protein; CAP protein family, cysteine-rich secretory proteins, struct genomics, joint center for structural genomics; 1.90A {Staphylococcus aureus subsp}
Probab=98.40 E-value=1.5e-07 Score=70.55 Aligned_cols=90 Identities=16% Similarity=0.142 Sum_probs=61.7
Q ss_pred hHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHhcccCCCCC----CCc---ccc--------cceecccccCCCCCCCC
Q 044840 14 LPQDYVNAHNAARAQVGVNPLKCDESIAAFARSYAKPCGSSG----NLS---GAD--------GLWVSEKDDYDYNSNSC 78 (128)
Q Consensus 14 ~~~~iL~~HN~~R~~~~m~~L~Wd~~La~~A~~~a~~C~~~g----~~~---~~~--------~~W~~e~~~y~~~~~~~ 78 (128)
..+.+|++.|.+|..++++||.||..|+..|+.+|......+ ..+ +.+ ..-..|...+.+.+..-
T Consensus 205 ~e~~il~liN~~R~~~GL~pL~~d~~L~~aA~~ha~dma~~~~~h~~~~g~~~~~R~~~~g~~~~~~gENIA~g~~~~~~ 284 (323)
T 4h0a_A 205 QLISLYEVTNEMRKLKGLKPLKINSDLAHIASNNLYEATSNGSDSVEFTEDALRGQLDKNHVTYKTTAQNVGYAFNDVPT 284 (323)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHTC------CCCHHHHHHHHHHTTCCCSEEEEEEEESCCSHHH
T ss_pred HHHHHHHHHHHHHHHcCCcccCccHhHHHHHHHHHHHHhhCCCCCcCCCCCCHHHHHHHcCCCcCeeeeEEecCCCCHHH
Confidence 456799999999999999999999999999999998776111 011 101 11123444444433110
Q ss_pred C--C-CccchhHHHHHHhcCCeEeEEEE
Q 044840 79 N--A-GKVCGHYTHVVWRNSVRIGCAKV 103 (128)
Q Consensus 79 ~--~-~~~~~hftq~vw~~t~~vGCa~~ 103 (128)
. . -..-||-.+|+..+-++||+|+.
T Consensus 285 vv~~WmnSpgHR~NiL~~~~t~iGvGv~ 312 (323)
T 4h0a_A 285 LIHSWMNSDIHRSRLLNSKYDEMGGDVM 312 (323)
T ss_dssp HHHHHHTSHHHHHHHTCSSCCEEEEEEE
T ss_pred HHHHHHcCHHHHHHHcCCCCCEEEEEEE
Confidence 0 0 12368999999999999999986
No 15
>3plv_C 66 kDa U4/U6.U5 small nuclear ribonucleoprotein C; ubiquitin-like, peptide binding protein; 1.90A {Saccharomyces cerevisiae}
Probab=69.92 E-value=4.7 Score=17.59 Aligned_cols=16 Identities=25% Similarity=0.524 Sum_probs=13.6
Q ss_pred HHHHHHHHhhcCCCCC
Q 044840 19 VNAHNAARAQVGVNPL 34 (128)
Q Consensus 19 L~~HN~~R~~~~m~~L 34 (128)
++.-|+.|...+|.++
T Consensus 4 iEEtnk~r~~lGLkpl 19 (21)
T 3plv_C 4 IEETNELRASLGLKLI 19 (26)
T ss_dssp HHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHcCCCCC
Confidence 5678999999998876
No 16
>3ukw_C Bimax1 peptide; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding, protein transport-IN complex; HET: BTB; 2.10A {Mus musculus}
Probab=26.00 E-value=22 Score=15.96 Aligned_cols=14 Identities=36% Similarity=0.525 Sum_probs=7.7
Q ss_pred HhhcCCCCCccCHH
Q 044840 26 RAQVGVNPLKCDES 39 (128)
Q Consensus 26 R~~~~m~~L~Wd~~ 39 (128)
|+...-.||.||++
T Consensus 4 rrrprkrplewded 17 (28)
T 3ukw_C 4 RRRPRKRPLEWDED 17 (28)
T ss_dssp ---CCCCCCCCCGG
T ss_pred ccccccCCcccccc
Confidence 44445678888864
Done!