BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044846
(290 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 123/225 (54%), Gaps = 22/225 (9%)
Query: 28 LSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEV 87
LS H ++V ++G C E +L+Y+++ NG+L ++++ + ++WE RL I +
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 88 SRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRTHLTTQVKVTF 146
+R L YLH+ A I H D+KS NILL + + KI+DF + K +D+THL VK T
Sbjct: 149 ARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTL 205
Query: 147 GYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTK-------PIHLVDVEE-------NRSL 192
GY+DP+YF + TEKSDVYSF VVL E+ + P +V++ E N L
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 193 AAY----FSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLEL 233
+ + E + F A +CL L+ + +P+M +V +L
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 122/225 (54%), Gaps = 22/225 (9%)
Query: 28 LSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEV 87
LS H ++V ++G C E +L+Y+++ NG+L ++++ + ++WE RL I +
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 88 SRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRTHLTTQVKVTF 146
+R L YLH+ A I H D+KS NILL + + KI+DF + K + +THL VK T
Sbjct: 149 ARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTL 205
Query: 147 GYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTK-------PIHLVDVEE-------NRSL 192
GY+DP+YF + TEKSDVYSF VVL E+ + P +V++ E N L
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 193 AAY----FSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLEL 233
+ + E + F A +CL L+ + +P+M +V +L
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 36/244 (14%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM 79
QF EV ++S HRN++++ G C+ LLVY ++ NGS+ + E+ + Q P+ W
Sbjct: 81 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 140
Query: 80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLT 139
R RI + +R L+YLH I H D+K+ANILL ++++A + DF K H+
Sbjct: 141 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 200
Query: 140 TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE---------------------LNWT 178
V+ T G++ P+Y + + +EK+DV+ + V+L+E L+W
Sbjct: 201 XAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 260
Query: 179 KPI-------HLVDVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTL 231
K + LVDV+ L + K+ E E++I A++ C + ++P M EV
Sbjct: 261 KGLLKEKKLEALVDVD----LQGNY-KDEEVEQLIQVALL---CTQSSPMERPKMSEVVR 312
Query: 232 ELAG 235
L G
Sbjct: 313 MLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 123/244 (50%), Gaps = 36/244 (14%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM 79
QF EV ++S HRN++++ G C+ LLVY ++ NGS+ + E+ + Q P+ W
Sbjct: 73 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 132
Query: 80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLT 139
R RI + +R L+YLH I H D+K+ANILL ++++A + DF K H+
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 192
Query: 140 TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE---------------------LNWT 178
V+ G++ P+Y + + +EK+DV+ + V+L+E L+W
Sbjct: 193 XAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 179 KPI-------HLVDVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTL 231
K + LVDV+ L + K+ E E++I A++ C + ++P M EV
Sbjct: 253 KGLLKEKKLEALVDVD----LQGNY-KDEEVEQLIQVALL---CTQSSPMERPKMSEVVR 304
Query: 232 ELAG 235
L G
Sbjct: 305 MLEG 308
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 124/242 (51%), Gaps = 30/242 (12%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
+QF E+ ++++ H N+V++LG + + LVY ++PNGSL + D P++W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWH 133
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
MR +I + +++LH I H DIKSANILL + + AKISDF + S +T
Sbjct: 134 MRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENR------- 190
+ +++ T Y+ P+ R + T KSD+YSF VVL+E+ P V+E+R
Sbjct: 191 MXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPA----VDEHREPQLLLD 245
Query: 191 ----------SLAAYFSK---EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIR 237
++ Y K +A+ V VA +CL+ K+P +K+V L +
Sbjct: 246 IKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305
Query: 238 AS 239
AS
Sbjct: 306 AS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 122/242 (50%), Gaps = 30/242 (12%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
+QF E+ ++++ H N+V++LG + + LVY ++PNGSL + D P++W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWH 133
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
MR +I + +++LH I H DIKSANILL + + AKISDF + S +T
Sbjct: 134 MRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRS------ 191
+ ++ T Y+ P+ R + T KSD+YSF VVL+E+ P V+E+R
Sbjct: 191 MXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPA----VDEHREPQLLLD 245
Query: 192 -----------LAAYFSK---EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIR 237
+ Y K +A+ V VA +CL+ K+P +K+V L +
Sbjct: 246 IKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305
Query: 238 AS 239
AS
Sbjct: 306 AS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 121/242 (50%), Gaps = 30/242 (12%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
+QF E+ ++++ H N+V++LG + + LVY ++PNGSL + D P++W
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWH 127
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
MR +I + +++LH I H DIKSANILL + + AKISDF + S +
Sbjct: 128 MRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRS------ 191
+ ++ T Y+ P+ R + T KSD+YSF VVL+E+ P V+E+R
Sbjct: 185 MXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPA----VDEHREPQLLLD 239
Query: 192 -----------LAAYFSK---EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIR 237
+ Y K +A+ V VA +CL+ K+P +K+V L +
Sbjct: 240 IKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 299
Query: 238 AS 239
AS
Sbjct: 300 AS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 114/232 (49%), Gaps = 30/232 (12%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
+QF E+ + ++ H N+V++LG + + LVY + PNGSL + D P++W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL-SCLDGTPPLSWH 124
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
R +I + +++LH I H DIKSANILL + + AKISDF + S +
Sbjct: 125 XRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENR------- 190
+++ T Y P+ R + T KSD+YSF VVL+E+ P V+E+R
Sbjct: 182 XXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPA----VDEHREPQLLLD 236
Query: 191 ----------SLAAYFSK---EAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
++ Y K +A+ V VA +CL+ K+P +K+V
Sbjct: 237 IKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKV 288
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 92/168 (54%), Gaps = 15/168 (8%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH-----EQ 68
H V +F+ EV I+ ++ H N+V +G + +V E++ GSLY+ +H EQ
Sbjct: 74 HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ 133
Query: 69 TDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTF 128
D++ RL + +V++ ++YLH+ + PI H ++KS N+L+ KY K+ DF
Sbjct: 134 LDER------RRLSMAYDVAKGMNYLHN-RNPPIVHRNLKSPNLLVDKKYTVKVCDFGL- 185
Query: 129 KSRAIDRTHLTTQVKV-TFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
SR T L+++ T ++ P+ R EKSDVYSF V+L EL
Sbjct: 186 -SRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 90/170 (52%), Gaps = 13/170 (7%)
Query: 11 KSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH---- 66
+ H V +F+ EV I+ ++ H N+V +G + +V E++ GSLY+ +H
Sbjct: 71 QDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA 130
Query: 67 -EQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
EQ D++ RL + +V++ ++YLH+ + PI H D+KS N+L+ KY K+ DF
Sbjct: 131 REQLDER------RRLSMAYDVAKGMNYLHN-RNPPIVHRDLKSPNLLVDKKYTVKVCDF 183
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ +A + T ++ P+ R EKSDVYSF V+L EL
Sbjct: 184 GLSRLKA-SXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 112/222 (50%), Gaps = 16/222 (7%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
ES + FI E+ LS++NH N+VK+ G CL LV E+ GSLY +H + LP
Sbjct: 42 ESERKAFIVELRQLSRVNHPNIVKLYGACLNPVC--LVMEYAEGGSLYNVLH--GAEPLP 97
Query: 75 -ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA-KISDFRTFKSRA 132
T + ++ S+ ++YLHS+ + H D+K N+LLV KI DF T A
Sbjct: 98 YYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGT----A 153
Query: 133 ID-RTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE-LNWTKPIHLVDVEENR 190
D +TH+T K + ++ P+ F S ++EK DV+S+ ++L E + KP + R
Sbjct: 154 CDIQTHMTNN-KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR 212
Query: 191 SLAAYFSKEAE---KEEVITFAMVAKRCLNLNGKKQPTMKEV 229
+ A + K + RC + + ++P+M+E+
Sbjct: 213 IMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEI 254
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 112/222 (50%), Gaps = 16/222 (7%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
ES + FI E+ LS++NH N+VK+ G CL LV E+ GSLY +H + LP
Sbjct: 43 ESERKAFIVELRQLSRVNHPNIVKLYGACLNPVC--LVMEYAEGGSLYNVLH--GAEPLP 98
Query: 75 -ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA-KISDFRTFKSRA 132
T + ++ S+ ++YLHS+ + H D+K N+LLV KI DF T A
Sbjct: 99 YYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGT----A 154
Query: 133 ID-RTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE-LNWTKPIHLVDVEENR 190
D +TH+T K + ++ P+ F S ++EK DV+S+ ++L E + KP + R
Sbjct: 155 CDIQTHMTNN-KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR 213
Query: 191 SLAAYFSKEAE---KEEVITFAMVAKRCLNLNGKKQPTMKEV 229
+ A + K + RC + + ++P+M+E+
Sbjct: 214 IMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEI 255
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 91/161 (56%), Gaps = 17/161 (10%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++F EV I+S +NH N+VK+ G L P +V EF+P G LY H D PI W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLY---HRLLDKAHPIKWS 122
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL--VDKYQ---AKISDFRTFKSRAI 133
++LR+ ++++ + Y+ + + PI H D++S NI L +D+ AK++DF T +
Sbjct: 123 VKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ--- 178
Query: 134 DRTHLTTQVKVTFGYVDPKYFRSSQ--FTEKSDVYSFSVVL 172
H + + F ++ P+ + + +TEK+D YSF+++L
Sbjct: 179 -SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL 218
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 91/161 (56%), Gaps = 17/161 (10%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++F EV I+S +NH N+VK+ G L P +V EF+P G LY H D PI W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLY---HRLLDKAHPIKWS 122
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL--VDKYQ---AKISDFRTFKSRAI 133
++LR+ ++++ + Y+ + + PI H D++S NI L +D+ AK++DF S +
Sbjct: 123 VKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF----SLSQ 177
Query: 134 DRTHLTTQVKVTFGYVDPKYFRSSQ--FTEKSDVYSFSVVL 172
H + + F ++ P+ + + +TEK+D YSF+++L
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL 218
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 90/161 (55%), Gaps = 17/161 (10%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++F EV I+S +NH N+VK+ G L P +V EF+P G LY H D PI W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLY---HRLLDKAHPIKWS 122
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL--VDKYQ---AKISDFRTFKSRAI 133
++LR+ ++++ + Y+ + + PI H D++S NI L +D+ AK++DF +
Sbjct: 123 VKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF----GLSQ 177
Query: 134 DRTHLTTQVKVTFGYVDPKYFRSSQ--FTEKSDVYSFSVVL 172
H + + F ++ P+ + + +TEK+D YSF+++L
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL 218
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 90/164 (54%), Gaps = 10/164 (6%)
Query: 16 SNVEQFINEVVILSQINHRNVVKILGCCLETE-VPLLVYEFIPNGSLYQYIHEQTDDQLP 74
V QF+ E +I+ +H NV+ +LG CL +E PL+V ++ +G L +I +T + P
Sbjct: 74 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--P 131
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSR 131
++ + ++V++ + +L AS H D+ + N +L +K+ K++DF R +
Sbjct: 132 TVKDL-IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 187
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D H T K+ ++ + ++ +FT KSDV+SF V+L EL
Sbjct: 188 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 231
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 90/164 (54%), Gaps = 10/164 (6%)
Query: 16 SNVEQFINEVVILSQINHRNVVKILGCCLETE-VPLLVYEFIPNGSLYQYIHEQTDDQLP 74
V QF+ E +I+ +H NV+ +LG CL +E PL+V ++ +G L +I +T + P
Sbjct: 74 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--P 131
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSR 131
++ + ++V++ + +L AS H D+ + N +L +K+ K++DF R +
Sbjct: 132 TVKDL-IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDK 187
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D H T K+ ++ + ++ +FT KSDV+SF V+L EL
Sbjct: 188 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 231
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 90/164 (54%), Gaps = 10/164 (6%)
Query: 16 SNVEQFINEVVILSQINHRNVVKILGCCLETE-VPLLVYEFIPNGSLYQYIHEQTDDQLP 74
V QF+ E +I+ +H NV+ +LG CL +E PL+V ++ +G L +I +T + P
Sbjct: 71 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--P 128
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSR 131
++ + ++V++ + +L AS H D+ + N +L +K+ K++DF R +
Sbjct: 129 TVKDL-IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 184
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D H T K+ ++ + ++ +FT KSDV+SF V+L EL
Sbjct: 185 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 228
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 90/164 (54%), Gaps = 10/164 (6%)
Query: 16 SNVEQFINEVVILSQINHRNVVKILGCCLETE-VPLLVYEFIPNGSLYQYIHEQTDDQLP 74
V QF+ E +I+ +H NV+ +LG CL +E PL+V ++ +G L +I +T + P
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--P 130
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSR 131
++ + ++V++ + +L AS H D+ + N +L +K+ K++DF R +
Sbjct: 131 TVKDL-IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 186
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D H T K+ ++ + ++ +FT KSDV+SF V+L EL
Sbjct: 187 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 90/164 (54%), Gaps = 10/164 (6%)
Query: 16 SNVEQFINEVVILSQINHRNVVKILGCCLETE-VPLLVYEFIPNGSLYQYIHEQTDDQLP 74
V QF+ E +I+ +H NV+ +LG CL +E PL+V ++ +G L +I +T + P
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--P 130
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSR 131
++ + ++V++ + +L AS H D+ + N +L +K+ K++DF R +
Sbjct: 131 TVKDL-IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 186
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D H T K+ ++ + ++ +FT KSDV+SF V+L EL
Sbjct: 187 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 16 SNVEQFINEVVILSQINHRNVVKILGCCLETE-VPLLVYEFIPNGSLYQYIHEQTDDQLP 74
V QF+ E +I+ +H NV+ +LG CL +E PL+V ++ +G L +I +T +
Sbjct: 132 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-- 189
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSR 131
T + + ++V++ + +L AS H D+ + N +L +K+ K++DF R +
Sbjct: 190 -TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D H T K+ ++ + ++ +FT KSDV+SF V+L EL
Sbjct: 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 289
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 16 SNVEQFINEVVILSQINHRNVVKILGCCLETE-VPLLVYEFIPNGSLYQYIHEQTDDQLP 74
V QF+ E +I+ +H NV+ +LG CL +E PL+V ++ +G L +I +T +
Sbjct: 78 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-- 135
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSR 131
T + + ++V++ + +L AS H D+ + N +L +K+ K++DF R +
Sbjct: 136 -TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 191
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D H T K+ ++ + ++ +FT KSDV+SF V+L EL
Sbjct: 192 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 235
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 16 SNVEQFINEVVILSQINHRNVVKILGCCLETE-VPLLVYEFIPNGSLYQYIHEQTDDQLP 74
V QF+ E +I+ +H NV+ +LG CL +E PL+V ++ +G L +I +T + P
Sbjct: 72 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--P 129
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSR 131
++ + ++V++ + YL AS H D+ + N +L +K+ K++DF R +
Sbjct: 130 TVKDL-IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 185
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
H T K+ ++ + ++ +FT KSDV+SF V+L EL
Sbjct: 186 EXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 229
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 22/169 (13%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI-HEQTDDQLPIT 76
+E E + + + H N++ + G CL+ LV EF G L + + ++ + +
Sbjct: 50 IENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVN 109
Query: 77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ--------AKISDFRTF 128
W V+++R ++YLH A +PI H D+KS+NIL++ K + KI+DF
Sbjct: 110 W------AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163
Query: 129 KSRAIDRTHLTTQVKV--TFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ H TT++ + ++ P+ R+S F++ SDV+S+ V+L EL
Sbjct: 164 R-----EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWEL 207
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 16 SNVEQFINEVVILSQINHRNVVKILGCCLETE-VPLLVYEFIPNGSLYQYIHEQTDDQLP 74
V QF+ E +I+ +H NV+ +LG CL +E PL+V ++ +G L +I +T + P
Sbjct: 71 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--P 128
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSR 131
++ + ++V++ + YL AS H D+ + N +L +K+ K++DF R +
Sbjct: 129 TVKDL-IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 184
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
H T K+ ++ + ++ +FT KSDV+SF V+L EL
Sbjct: 185 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 228
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 16 SNVEQFINEVVILSQINHRNVVKILGCCLETE-VPLLVYEFIPNGSLYQYIHEQTDDQLP 74
V QF+ E +I+ +H NV+ +LG CL +E PL+V ++ +G L +I +T + P
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--P 130
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSR 131
++ + ++V++ + YL AS H D+ + N +L +K+ K++DF R +
Sbjct: 131 TVKDL-IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 186
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
H T K+ ++ + ++ +FT KSDV+SF V+L EL
Sbjct: 187 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 16 SNVEQFINEVVILSQINHRNVVKILGCCLETE-VPLLVYEFIPNGSLYQYIHEQTDDQLP 74
V QF+ E +I+ +H NV+ +LG CL +E PL+V ++ +G L +I +T + P
Sbjct: 65 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--P 122
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSR 131
++ + ++V++ + YL AS H D+ + N +L +K+ K++DF R +
Sbjct: 123 TVKDL-IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 178
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
H T K+ ++ + ++ +FT KSDV+SF V+L EL
Sbjct: 179 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 222
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 16 SNVEQFINEVVILSQINHRNVVKILGCCLETE-VPLLVYEFIPNGSLYQYIHEQTDDQLP 74
V QF+ E +I+ +H NV+ +LG CL +E PL+V ++ +G L +I +T + P
Sbjct: 70 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--P 127
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSR 131
++ + ++V++ + YL AS H D+ + N +L +K+ K++DF R +
Sbjct: 128 TVKDL-IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 183
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
H T K+ ++ + ++ +FT KSDV+SF V+L EL
Sbjct: 184 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 227
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 16 SNVEQFINEVVILSQINHRNVVKILGCCLETE-VPLLVYEFIPNGSLYQYIHEQTDDQLP 74
V QF+ E +I+ +H NV+ +LG CL +E PL+V ++ +G L +I +T + P
Sbjct: 91 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--P 148
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSR 131
++ + ++V++ + YL AS H D+ + N +L +K+ K++DF R +
Sbjct: 149 TVKDL-IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 204
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
H T K+ ++ + ++ +FT KSDV+SF V+L EL
Sbjct: 205 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 248
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 16 SNVEQFINEVVILSQINHRNVVKILGCCLETE-VPLLVYEFIPNGSLYQYIHEQTDDQLP 74
V QF+ E +I+ +H NV+ +LG CL +E PL+V ++ +G L +I +T + P
Sbjct: 68 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--P 125
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSR 131
++ + ++V++ + YL AS H D+ + N +L +K+ K++DF R +
Sbjct: 126 TVKDL-IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
H T K+ ++ + ++ +FT KSDV+SF V+L EL
Sbjct: 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 225
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 16 SNVEQFINEVVILSQINHRNVVKILGCCLETE-VPLLVYEFIPNGSLYQYIHEQTDDQLP 74
V QF+ E +I+ +H NV+ +LG CL +E PL+V ++ +G L +I +T + P
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--P 130
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSR 131
++ + ++V++ + YL AS H D+ + N +L +K+ K++DF R +
Sbjct: 131 TVKDL-IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 186
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
H T K+ ++ + ++ +FT KSDV+SF V+L EL
Sbjct: 187 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 10/164 (6%)
Query: 16 SNVEQFINEVVILSQINHRNVVKILGCCLETE-VPLLVYEFIPNGSLYQYIHEQTDDQLP 74
V QF+ E +I+ +H NV+ +LG CL +E PL+V ++ +G L +I +T +
Sbjct: 92 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-- 149
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSR 131
T + + ++V++ + YL AS H D+ + N +L +K+ K++DF R +
Sbjct: 150 -TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 205
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
H T K+ ++ + ++ +FT KSDV+SF V+L EL
Sbjct: 206 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 249
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 16 SNVEQFINEVVILSQINHRNVVKILGCCLETE-VPLLVYEFIPNGSLYQYIHEQTDDQLP 74
V QF+ E +I+ +H NV+ +LG CL +E PL+V ++ +G L +I +T + P
Sbjct: 72 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--P 129
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSR 131
++ + ++V++ + YL AS H D+ + N +L +K+ K++DF R +
Sbjct: 130 TVKDL-IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 185
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
H T K+ ++ + ++ +FT KSDV+SF V+L EL
Sbjct: 186 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 229
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 11/176 (6%)
Query: 5 WLLKKS---KSVHESNV--EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNG 59
WL K K++ E + E FI E ++ +++H +V++ G CLE LV+EF+ +G
Sbjct: 31 WLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG 90
Query: 60 SLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ 119
L Y+ Q E L + ++V ++YL I H D+ + N L+ +
Sbjct: 91 CLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEACVI---HRDLAARNCLVGENQV 144
Query: 120 AKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K+SDF + D+ +T K + P+ F S+++ KSDV+SF V++ E+
Sbjct: 145 IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 200
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 11/176 (6%)
Query: 5 WLLKKS---KSVHESNV--EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNG 59
WL K K++ E + E FI E ++ +++H +V++ G CLE LV+EF+ +G
Sbjct: 28 WLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG 87
Query: 60 SLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ 119
L Y+ Q E L + ++V ++YL + I H D+ + N L+ +
Sbjct: 88 CLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEASVI---HRDLAARNCLVGENQV 141
Query: 120 AKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K+SDF + D+ +T K + P+ F S+++ KSDV+SF V++ E+
Sbjct: 142 IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 197
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 11/176 (6%)
Query: 5 WLLKKS---KSVHESNV--EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNG 59
WL K K++ E + E FI E ++ +++H +V++ G CLE LV+EF+ +G
Sbjct: 28 WLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG 87
Query: 60 SLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ 119
L Y+ Q E L + ++V ++YL I H D+ + N L+ +
Sbjct: 88 CLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEACVI---HRDLAARNCLVGENQV 141
Query: 120 AKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K+SDF + D+ +T K + P+ F S+++ KSDV+SF V++ E+
Sbjct: 142 IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 197
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 111/224 (49%), Gaps = 12/224 (5%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
++NVE F++E +I++ ++H ++V++LG CL + LV + +P+G L +Y+HE D+
Sbjct: 82 KANVE-FMDEALIMASMDHPHLVRLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDN--- 136
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAID 134
I ++ L V++++ + YL + H D+ + N+L+ KI+DF + D
Sbjct: 137 IGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 193
Query: 135 -RTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRS 191
+ + K+ ++ + +FT +SDV+S+ V + EL KP + E
Sbjct: 194 EKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPD 253
Query: 192 LAAYFSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELA 234
L + + I MV +C ++ +P KE+ E +
Sbjct: 254 LLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFS 297
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 11/176 (6%)
Query: 5 WLLKKS---KSVHESNV--EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNG 59
WL K K++ E + E FI E ++ +++H +V++ G CLE LV+EF+ +G
Sbjct: 26 WLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG 85
Query: 60 SLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ 119
L Y+ Q E L + ++V ++YL I H D+ + N L+ +
Sbjct: 86 CLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEACVI---HRDLAARNCLVGENQV 139
Query: 120 AKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K+SDF + D+ +T K + P+ F S+++ KSDV+SF V++ E+
Sbjct: 140 IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 195
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 111/224 (49%), Gaps = 12/224 (5%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
++NVE F++E +I++ ++H ++V++LG CL + LV + +P+G L +Y+HE D+
Sbjct: 59 KANVE-FMDEALIMASMDHPHLVRLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDN--- 113
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAID 134
I ++ L V++++ + YL + H D+ + N+L+ KI+DF + D
Sbjct: 114 IGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 170
Query: 135 -RTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRS 191
+ + K+ ++ + +FT +SDV+S+ V + EL KP + E
Sbjct: 171 EKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPD 230
Query: 192 LAAYFSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELA 234
L + + I MV +C ++ +P KE+ E +
Sbjct: 231 LLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFS 274
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 11/176 (6%)
Query: 5 WLLKKS---KSVHESNVEQ--FINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNG 59
WL K K++ E ++ + FI E ++ +++H +V++ G CLE LV+EF+ +G
Sbjct: 48 WLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG 107
Query: 60 SLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ 119
L Y+ Q E L + ++V ++YL I H D+ + N L+ +
Sbjct: 108 CLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEACVI---HRDLAARNCLVGENQV 161
Query: 120 AKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K+SDF + D+ +T K + P+ F S+++ KSDV+SF V++ E+
Sbjct: 162 IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 217
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 11/176 (6%)
Query: 5 WLLKKS---KSVHESNV--EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNG 59
WL K K++ E + E FI E ++ +++H +V++ G CLE LV EF+ +G
Sbjct: 29 WLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHG 88
Query: 60 SLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ 119
L Y+ Q E L + ++V ++YL I H D+ + N L+ +
Sbjct: 89 CLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEACVI---HRDLAARNCLVGENQV 142
Query: 120 AKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K+SDF + D+ +T K + P+ F S+++ KSDV+SF V++ E+
Sbjct: 143 IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 198
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C +V E++P G+L Y+ E ++ +T
Sbjct: 72 VEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREE--VTA 129
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H D+ + N L+ + + K++DF + D
Sbjct: 130 VVLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHVVKVADFGLSRLMTGDTYT 186
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ + F+ KSDV++F V+L E+
Sbjct: 187 AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI 224
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 122/272 (44%), Gaps = 48/272 (17%)
Query: 3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVP--LLVYEFIPNGS 60
E+ +KK + E ++ F E+ IL + H N+VK G C L+ EF+P GS
Sbjct: 43 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGS 102
Query: 61 LYQYI--HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY 118
L +Y+ H++ D + + L+ T ++ + + YL + I H D+ + NIL+ ++
Sbjct: 103 LREYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 154
Query: 119 QAKISDFRTFKSRAIDRTHLTTQ---VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ KI DF K D+ + F Y P+ S+F+ SDV+SF VVL EL
Sbjct: 155 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYEL 213
Query: 176 NWTKPIHLVDVEENRSLAAYFSK---EAEKEEVITFA----------------------M 210
+E+++S A F + ++ ++I F M
Sbjct: 214 -------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM 266
Query: 211 VAKRCLNLNGKKQPTMKEVTLELAGIRASIGA 242
+ C N N ++P+ +++ L + IR ++
Sbjct: 267 IMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 298
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 88/163 (53%), Gaps = 10/163 (6%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQ 72
+++ + F+ E +++Q+ H N+V++LG +E + L +V E++ GSL Y+ +
Sbjct: 45 NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV 104
Query: 73 LPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRA 132
L + L+ +++V + YL + H D+ + N+L+ + AK+SDF K +
Sbjct: 105 L--GGDCLLKFSLDVCEAMEYLEGNNFV---HRDLAARNVLVSEDNVAKVSDFGLTKEAS 159
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
T T ++ V + P+ R + F+ KSDV+SF ++L E+
Sbjct: 160 --STQDTGKLPVK--WTAPEALREAAFSTKSDVWSFGILLWEI 198
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 88/163 (53%), Gaps = 10/163 (6%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQ 72
+++ + F+ E +++Q+ H N+V++LG +E + L +V E++ GSL Y+ +
Sbjct: 54 NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV 113
Query: 73 LPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRA 132
L + L+ +++V + YL + H D+ + N+L+ + AK+SDF K +
Sbjct: 114 L--GGDCLLKFSLDVCEAMEYLEGNNFV---HRDLAARNVLVSEDNVAKVSDFGLTKEAS 168
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
T T ++ V + P+ R +F+ KSDV+SF ++L E+
Sbjct: 169 --STQDTGKLPVK--WTAPEALREKKFSTKSDVWSFGILLWEI 207
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 88/163 (53%), Gaps = 10/163 (6%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQ 72
+++ + F+ E +++Q+ H N+V++LG +E + L +V E++ GSL Y+ +
Sbjct: 39 NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV 98
Query: 73 LPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRA 132
L + L+ +++V + YL + H D+ + N+L+ + AK+SDF K +
Sbjct: 99 L--GGDCLLKFSLDVCEAMEYLEGNNFV---HRDLAARNVLVSEDNVAKVSDFGLTKEAS 153
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
T T ++ V + P+ R +F+ KSDV+SF ++L E+
Sbjct: 154 --STQDTGKLPVK--WTAPEALREKKFSTKSDVWSFGILLWEI 192
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 88/163 (53%), Gaps = 10/163 (6%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQ 72
+++ + F+ E +++Q+ H N+V++LG +E + L +V E++ GSL Y+ +
Sbjct: 226 NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV 285
Query: 73 LPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRA 132
L + L+ +++V + YL + H D+ + N+L+ + AK+SDF K +
Sbjct: 286 L--GGDCLLKFSLDVCEAMEYLEGNNFV---HRDLAARNVLVSEDNVAKVSDFGLTKEAS 340
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
T T ++ V + P+ R +F+ KSDV+SF ++L E+
Sbjct: 341 --STQDTGKLPVK--WTAPEALREKKFSTKSDVWSFGILLWEI 379
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C ++ EF+ G+L Y+ E ++
Sbjct: 51 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV- 109
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H D+ + N L+ + + K++DF + D
Sbjct: 110 -VLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT 165
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ ++F+ KSDV++F V+L E+
Sbjct: 166 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 16 SNVEQFINEVVILSQINHRNVVKILGCCLETEVPL--LVYEFIPNGSLYQYIHEQTDDQL 73
+++ E+ IL + H N+VK G C E L+ EF+P+GSL +Y+ + +
Sbjct: 65 NHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-- 122
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI 133
I + +L+ V++ + + YL S + H D+ + N+L+ ++Q KI DF K+
Sbjct: 123 -INLKQQLKYAVQICKGMDYLGSRQYV---HRDLAARNVLVESEHQVKIGDFGLTKAIET 178
Query: 134 DRTHLTTQ---VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D+ T + F Y P+ S+F SDV+SF V L EL
Sbjct: 179 DKEXXTVKDDRDSPVFWYA-PECLMQSKFYIASDVWSFGVTLHEL 222
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C ++ EF+ G+L Y+ E ++
Sbjct: 51 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAV- 109
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H D+ + N L+ + + K++DF + D
Sbjct: 110 -VLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT 165
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ ++F+ KSDV++F V+L E+
Sbjct: 166 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 16 SNVEQFINEVVILSQINHRNVVKILGCCLETEVPL--LVYEFIPNGSLYQYIHEQTDDQL 73
+++ E+ IL + H N+VK G C E L+ EF+P+GSL +Y+ + +
Sbjct: 53 NHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-- 110
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI 133
I + +L+ V++ + + YL S + H D+ + N+L+ ++Q KI DF K+
Sbjct: 111 -INLKQQLKYAVQICKGMDYLGSRQYV---HRDLAARNVLVESEHQVKIGDFGLTKAIET 166
Query: 134 DRTHLTTQ---VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D+ T + F Y P+ S+F SDV+SF V L EL
Sbjct: 167 DKEXXTVKDDRDSPVFWYA-PECLMQSKFYIASDVWSFGVTLHEL 210
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C ++ EF+ G+L Y+ E ++
Sbjct: 54 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV- 112
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H D+ + N L+ + + K++DF + D
Sbjct: 113 -VLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT 168
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ ++F+ KSDV++F V+L E+
Sbjct: 169 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 121/272 (44%), Gaps = 48/272 (17%)
Query: 3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVP--LLVYEFIPNGS 60
E+ +KK + E ++ F E+ IL + H N+VK G C L+ E++P GS
Sbjct: 40 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 99
Query: 61 LYQYI--HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY 118
L Y+ H++ D + + L+ T ++ + + YL + I H D+ + NIL+ ++
Sbjct: 100 LRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 151
Query: 119 QAKISDFRTFKSRAIDRTHLTTQ---VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ KI DF K D+ + F Y P+ S+F+ SDV+SF VVL EL
Sbjct: 152 RVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYEL 210
Query: 176 NWTKPIHLVDVEENRSLAAYFSK---EAEKEEVITFA----------------------M 210
+E+++S A F + ++ ++I F M
Sbjct: 211 -------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM 263
Query: 211 VAKRCLNLNGKKQPTMKEVTLELAGIRASIGA 242
+ C N N ++P+ +++ L + IR ++
Sbjct: 264 IMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 295
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 122/274 (44%), Gaps = 48/274 (17%)
Query: 3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVP--LLVYEFIPNGS 60
E+ +KK + E ++ F E+ IL + H N+VK G C L+ E++P GS
Sbjct: 44 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 103
Query: 61 LYQYI--HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY 118
L Y+ H++ D + + L+ T ++ + + YL + I H D+ + NIL+ ++
Sbjct: 104 LRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 155
Query: 119 QAKISDFRTFKSRAIDRTHLTTQ---VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ KI DF K D+ + F Y P+ S+F+ SDV+SF VVL EL
Sbjct: 156 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYEL 214
Query: 176 NWTKPIHLVDVEENRSLAAYFSK---EAEKEEVITFA----------------------M 210
+E+++S A F + ++ ++I F M
Sbjct: 215 -------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM 267
Query: 211 VAKRCLNLNGKKQPTMKEVTLELAGIRASIGASV 244
+ C N N ++P+ +++ L + IR ++ V
Sbjct: 268 IMTECWNNNVNQRPSFRDLALRVDQIRDNMAGLV 301
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C ++ EF+ G+L Y+ E ++
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV- 116
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H D+ + N L+ + + K++DF + D
Sbjct: 117 -VLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT 172
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ ++F+ KSDV++F V+L E+
Sbjct: 173 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 20/186 (10%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
++ FI EV + ++HRN++++ G L + +V E P GSL + + L T
Sbjct: 65 MDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTL 123
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
R V+V+ + YL S I H D+ + N+LL + KI DF ++ + H
Sbjct: 124 S---RYAVQVAEGMGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
Query: 138 LTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE-----------LNWTKPIHLV 184
Q KV F + P+ ++ F+ SD + F V L E LN ++ +H +
Sbjct: 178 XVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 237
Query: 185 DVEENR 190
D E R
Sbjct: 238 DKEGER 243
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C ++ EF+ G+L Y+ E ++
Sbjct: 55 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV- 113
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H D+ + N L+ + + K++DF + D
Sbjct: 114 -VLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 169
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ ++F+ KSDV++F V+L E+
Sbjct: 170 APAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C ++ EF+ G+L Y+ E ++
Sbjct: 54 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV- 112
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H D+ + N L+ + + K++DF + D
Sbjct: 113 -VLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 168
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ ++F+ KSDV++F V+L E+
Sbjct: 169 APAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 121/272 (44%), Gaps = 48/272 (17%)
Query: 3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVP--LLVYEFIPNGS 60
E+ +KK + E ++ F E+ IL + H N+VK G C L+ E++P GS
Sbjct: 40 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 99
Query: 61 LYQYI--HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY 118
L Y+ H++ D + + L+ T ++ + + YL + I H D+ + NIL+ ++
Sbjct: 100 LRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 151
Query: 119 QAKISDFRTFKSRAIDRTHLTTQ---VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ KI DF K D+ + F Y P+ S+F+ SDV+SF VVL EL
Sbjct: 152 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYEL 210
Query: 176 NWTKPIHLVDVEENRSLAAYFSK---EAEKEEVITFA----------------------M 210
+E+++S A F + ++ ++I F M
Sbjct: 211 -------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM 263
Query: 211 VAKRCLNLNGKKQPTMKEVTLELAGIRASIGA 242
+ C N N ++P+ +++ L + IR ++
Sbjct: 264 IMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 295
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C ++ EF+ G+L Y+ E ++
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV- 116
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H D+ + N L+ + + K++DF + D
Sbjct: 117 -VLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ ++F+ KSDV++F V+L E+
Sbjct: 173 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C ++ EF+ G+L Y+ E ++
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAV- 111
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H D+ + N L+ + + K++DF + D
Sbjct: 112 -VLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ ++F+ KSDV++F V+L E+
Sbjct: 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C ++ EF+ G+L Y+ E ++
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAV- 111
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H D+ + N L+ + + K++DF + D
Sbjct: 112 -VLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ ++F+ KSDV++F V+L E+
Sbjct: 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C ++ EF+ G+L Y+ E ++
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV- 111
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H D+ + N L+ + + K++DF + D
Sbjct: 112 -VLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ ++F+ KSDV++F V+L E+
Sbjct: 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C ++ EF+ G+L Y+ E ++
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV- 111
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H D+ + N L+ + + K++DF + D
Sbjct: 112 -VLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ ++F+ KSDV++F V+L E+
Sbjct: 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C ++ EF+ G+L Y+ E ++
Sbjct: 51 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV- 109
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H D+ + N L+ + + K++DF + D
Sbjct: 110 -VLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFT 165
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ ++F+ KSDV++F V+L E+
Sbjct: 166 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 121/272 (44%), Gaps = 48/272 (17%)
Query: 3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVP--LLVYEFIPNGS 60
E+ +KK + E ++ F E+ IL + H N+VK G C L+ E++P GS
Sbjct: 46 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 105
Query: 61 LYQYI--HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY 118
L Y+ H++ D + + L+ T ++ + + YL + I H D+ + NIL+ ++
Sbjct: 106 LRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 157
Query: 119 QAKISDFRTFKSRAIDRTHLTTQ---VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ KI DF K D+ + F Y P+ S+F+ SDV+SF VVL EL
Sbjct: 158 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYEL 216
Query: 176 NWTKPIHLVDVEENRSLAAYFSK---EAEKEEVITFA----------------------M 210
+E+++S A F + ++ ++I F M
Sbjct: 217 -------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM 269
Query: 211 VAKRCLNLNGKKQPTMKEVTLELAGIRASIGA 242
+ C N N ++P+ +++ L + IR ++
Sbjct: 270 IMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 301
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 121/272 (44%), Gaps = 48/272 (17%)
Query: 3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVP--LLVYEFIPNGS 60
E+ +KK + E ++ F E+ IL + H N+VK G C L+ E++P GS
Sbjct: 47 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 106
Query: 61 LYQYI--HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY 118
L Y+ H++ D + + L+ T ++ + + YL + I H D+ + NIL+ ++
Sbjct: 107 LRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 158
Query: 119 QAKISDFRTFKSRAIDRTHLTTQ---VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ KI DF K D+ + F Y P+ S+F+ SDV+SF VVL EL
Sbjct: 159 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYEL 217
Query: 176 NWTKPIHLVDVEENRSLAAYFSK---EAEKEEVITFA----------------------M 210
+E+++S A F + ++ ++I F M
Sbjct: 218 -------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM 270
Query: 211 VAKRCLNLNGKKQPTMKEVTLELAGIRASIGA 242
+ C N N ++P+ +++ L + IR ++
Sbjct: 271 IMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 302
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 121/272 (44%), Gaps = 48/272 (17%)
Query: 3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVP--LLVYEFIPNGS 60
E+ +KK + E ++ F E+ IL + H N+VK G C L+ E++P GS
Sbjct: 43 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 102
Query: 61 LYQYI--HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY 118
L Y+ H++ D + + L+ T ++ + + YL + I H D+ + NIL+ ++
Sbjct: 103 LRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 154
Query: 119 QAKISDFRTFKSRAIDRTHLTTQ---VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ KI DF K D+ + F Y P+ S+F+ SDV+SF VVL EL
Sbjct: 155 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYEL 213
Query: 176 NWTKPIHLVDVEENRSLAAYFSK---EAEKEEVITFA----------------------M 210
+E+++S A F + ++ ++I F M
Sbjct: 214 -------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM 266
Query: 211 VAKRCLNLNGKKQPTMKEVTLELAGIRASIGA 242
+ C N N ++P+ +++ L + IR ++
Sbjct: 267 IMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 298
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 121/272 (44%), Gaps = 48/272 (17%)
Query: 3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVP--LLVYEFIPNGS 60
E+ +KK + E ++ F E+ IL + H N+VK G C L+ E++P GS
Sbjct: 40 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 99
Query: 61 LYQYI--HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY 118
L Y+ H++ D + + L+ T ++ + + YL + I H D+ + NIL+ ++
Sbjct: 100 LRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 151
Query: 119 QAKISDFRTFKSRAIDRTHLTTQ---VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ KI DF K D+ + F Y P+ S+F+ SDV+SF VVL EL
Sbjct: 152 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYEL 210
Query: 176 NWTKPIHLVDVEENRSLAAYFSK---EAEKEEVITFA----------------------M 210
+E+++S A F + ++ ++I F M
Sbjct: 211 -------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM 263
Query: 211 VAKRCLNLNGKKQPTMKEVTLELAGIRASIGA 242
+ C N N ++P+ +++ L + IR ++
Sbjct: 264 IMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 295
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 121/272 (44%), Gaps = 48/272 (17%)
Query: 3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVP--LLVYEFIPNGS 60
E+ +KK + E ++ F E+ IL + H N+VK G C L+ E++P GS
Sbjct: 45 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 104
Query: 61 LYQYI--HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY 118
L Y+ H++ D + + L+ T ++ + + YL + I H D+ + NIL+ ++
Sbjct: 105 LRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 156
Query: 119 QAKISDFRTFKSRAIDRTHLTTQ---VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ KI DF K D+ + F Y P+ S+F+ SDV+SF VVL EL
Sbjct: 157 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYEL 215
Query: 176 NWTKPIHLVDVEENRSLAAYFSK---EAEKEEVITFA----------------------M 210
+E+++S A F + ++ ++I F M
Sbjct: 216 -------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM 268
Query: 211 VAKRCLNLNGKKQPTMKEVTLELAGIRASIGA 242
+ C N N ++P+ +++ L + IR ++
Sbjct: 269 IMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 300
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 20/186 (10%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
++ FI EV + ++HRN++++ G L + +V E P GSL + + L T
Sbjct: 55 MDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTL 113
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
R V+V+ + YL S I H D+ + N+LL + KI DF ++ + H
Sbjct: 114 S---RYAVQVAEGMGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
Query: 138 LTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE-----------LNWTKPIHLV 184
Q KV F + P+ ++ F+ SD + F V L E LN ++ +H +
Sbjct: 168 XVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 227
Query: 185 DVEENR 190
D E R
Sbjct: 228 DKEGER 233
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 20/186 (10%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
++ FI EV + ++HRN++++ G L + +V E P GSL + + L T
Sbjct: 65 MDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTL 123
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
R V+V+ + YL S I H D+ + N+LL + KI DF ++ + H
Sbjct: 124 S---RYAVQVAEGMGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
Query: 138 LTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE-----------LNWTKPIHLV 184
Q KV F + P+ ++ F+ SD + F V L E LN ++ +H +
Sbjct: 178 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 237
Query: 185 DVEENR 190
D E R
Sbjct: 238 DKEGER 243
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 120/272 (44%), Gaps = 48/272 (17%)
Query: 3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVP--LLVYEFIPNGS 60
E+ +KK + E ++ F E+ IL + H N+VK G C L+ E++P GS
Sbjct: 38 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 97
Query: 61 LYQYI--HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY 118
L Y+ H++ D + + L+ T ++ + + YL + I H D+ + NIL+ ++
Sbjct: 98 LRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 149
Query: 119 QAKISDFRTFKSRAIDRTHLTTQ---VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ KI DF K D+ + F Y P+ S+F+ SDV+SF VVL EL
Sbjct: 150 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYEL 208
Query: 176 NWTKPIHLVDVEENRSLAAYFSK---EAEKEEVITFA----------------------M 210
+E+++S A F + ++ ++I F M
Sbjct: 209 -------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM 261
Query: 211 VAKRCLNLNGKKQPTMKEVTLELAGIRASIGA 242
+ C N N ++P+ +++ L + IR +
Sbjct: 262 IMTECWNNNVNQRPSFRDLALRVDQIRDQMAG 293
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C ++ EF+ G+L Y+ E ++
Sbjct: 55 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV- 113
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H D+ + N L+ + + K++DF + D
Sbjct: 114 -VLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 169
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ ++F+ KSDV++F V+L E+
Sbjct: 170 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 20/186 (10%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
++ FI EV + ++HRN++++ G L + +V E P GSL + + L T
Sbjct: 59 MDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTL 117
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
R V+V+ + YL S I H D+ + N+LL + KI DF ++ + H
Sbjct: 118 S---RYAVQVAEGMGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
Query: 138 LTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE-----------LNWTKPIHLV 184
Q KV F + P+ ++ F+ SD + F V L E LN ++ +H +
Sbjct: 172 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 231
Query: 185 DVEENR 190
D E R
Sbjct: 232 DKEGER 237
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 121/272 (44%), Gaps = 48/272 (17%)
Query: 3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVP--LLVYEFIPNGS 60
E+ +KK + E ++ F E+ IL + H N+VK G C L+ E++P GS
Sbjct: 58 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 117
Query: 61 LYQYI--HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY 118
L Y+ H++ D + + L+ T ++ + + YL + I H D+ + NIL+ ++
Sbjct: 118 LRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 169
Query: 119 QAKISDFRTFKSRAIDRTHLTTQ---VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ KI DF K D+ + F Y P+ S+F+ SDV+SF VVL EL
Sbjct: 170 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYEL 228
Query: 176 NWTKPIHLVDVEENRSLAAYFSK---EAEKEEVITFA----------------------M 210
+E+++S A F + ++ ++I F M
Sbjct: 229 -------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM 281
Query: 211 VAKRCLNLNGKKQPTMKEVTLELAGIRASIGA 242
+ C N N ++P+ +++ L + IR ++
Sbjct: 282 IMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 313
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C ++ EF+ G+L Y+ E ++
Sbjct: 57 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV- 115
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H D+ + N L+ + + K++DF + D
Sbjct: 116 -VLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 171
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ ++F+ KSDV++F V+L E+
Sbjct: 172 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 209
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 20/186 (10%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
++ FI EV + ++HRN++++ G L + +V E P GSL + + L T
Sbjct: 55 MDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTL 113
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
R V+V+ + YL S I H D+ + N+LL + KI DF ++ + H
Sbjct: 114 S---RYAVQVAEGMGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
Query: 138 LTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE-----------LNWTKPIHLV 184
Q KV F + P+ ++ F+ SD + F V L E LN ++ +H +
Sbjct: 168 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 227
Query: 185 DVEENR 190
D E R
Sbjct: 228 DKEGER 233
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 87/173 (50%), Gaps = 23/173 (13%)
Query: 11 KSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
+ +++ E+ + E I+ Q+++ +V+++G C + E +LV E G L++++ + +
Sbjct: 47 QGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKRE 105
Query: 71 DQLPITWEMRLRITVEVSRVLSYLHSVASIPIY-------HLDIKSANILLVDKYQAKIS 123
+ + VS V LH V+ Y H D+ + N+LLV+++ AKIS
Sbjct: 106 E-------------IPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKIS 152
Query: 124 DFRTFKSRAIDRTHLTTQV--KVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE 174
DF K+ D ++ T + K + P+ +F+ +SDV+S+ V + E
Sbjct: 153 DFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWE 205
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C ++ EF+ G+L Y+ E ++
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV- 116
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H D+ + N L+ + + K++DF + D
Sbjct: 117 -VLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ ++F+ KSDV++F V+L E+
Sbjct: 173 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 20/186 (10%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
++ FI EV + ++HRN++++ G L + +V E P GSL + + L T
Sbjct: 55 MDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTL 113
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
R V+V+ + YL S I H D+ + N+LL + KI DF ++ + H
Sbjct: 114 S---RYAVQVAEGMGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
Query: 138 LTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE-----------LNWTKPIHLV 184
Q KV F + P+ ++ F+ SD + F V L E LN ++ +H +
Sbjct: 168 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 227
Query: 185 DVEENR 190
D E R
Sbjct: 228 DKEGER 233
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C ++ EF+ G+L Y+ E ++
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV- 111
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H D+ + N L+ + + K++DF + D
Sbjct: 112 -VLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ ++F+ KSDV++F V+L E+
Sbjct: 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C ++ EF+ G+L Y+ E ++
Sbjct: 55 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV- 113
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H D+ + N L+ + + K++DF + D
Sbjct: 114 -VLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 169
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ ++F+ KSDV++F V+L E+
Sbjct: 170 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C ++ EF+ G+L Y+ E ++
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV- 116
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H D+ + N L+ + + K++DF + D
Sbjct: 117 -VLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ ++F+ KSDV++F V+L E+
Sbjct: 173 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C ++ EF+ G+L Y+ E ++
Sbjct: 66 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV- 124
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H D+ + N L+ + + K++DF + D
Sbjct: 125 -VLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 180
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ ++F+ KSDV++F V+L E+
Sbjct: 181 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 218
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C ++ EF+ G+L Y+ E ++
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV- 111
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H D+ + N L+ + + K++DF + D
Sbjct: 112 -VLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ ++F+ KSDV++F V+L E+
Sbjct: 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 20/186 (10%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
++ FI EV + ++HRN++++ G L + +V E P GSL + + L T
Sbjct: 59 MDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTL 117
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
R V+V+ + YL S I H D+ + N+LL + KI DF ++ + H
Sbjct: 118 S---RYAVQVAEGMGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
Query: 138 LTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE-----------LNWTKPIHLV 184
Q KV F + P+ ++ F+ SD + F V L E LN ++ +H +
Sbjct: 172 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 231
Query: 185 DVEENR 190
D E R
Sbjct: 232 DKEGER 237
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 121/271 (44%), Gaps = 48/271 (17%)
Query: 3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVP--LLVYEFIPNGS 60
E+ +KK + E ++ F E+ IL + H N+VK G C L+ E++P GS
Sbjct: 39 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 98
Query: 61 LYQYI--HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY 118
L Y+ H++ D + + L+ T ++ + + YL + I H D+ + NIL+ ++
Sbjct: 99 LRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 150
Query: 119 QAKISDFRTFKSRAIDRTHLTTQ---VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ KI DF K D+ + F Y P+ S+F+ SDV+SF VVL EL
Sbjct: 151 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYEL 209
Query: 176 NWTKPIHLVDVEENRSLAAYFSK---EAEKEEVITFA----------------------M 210
+E+++S A F + ++ ++I F M
Sbjct: 210 -------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM 262
Query: 211 VAKRCLNLNGKKQPTMKEVTLELAGIRASIG 241
+ C N N ++P+ +++ L + IR ++
Sbjct: 263 IMTECWNNNVNQRPSFRDLALRVDQIRDNMA 293
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 120/272 (44%), Gaps = 48/272 (17%)
Query: 3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVP--LLVYEFIPNGS 60
E+ +KK + E ++ F E+ IL + H N+VK G C L+ E++P GS
Sbjct: 71 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 130
Query: 61 LYQYI--HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY 118
L Y+ H++ D + + L+ T ++ + + YL + I H D+ + NIL+ ++
Sbjct: 131 LRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 182
Query: 119 QAKISDFRTFKSRAIDRTHLTTQ---VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ KI DF K D+ + F Y P+ S+F+ SDV+SF VVL EL
Sbjct: 183 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYEL 241
Query: 176 NWTKPIHLVDVEENRSLAAYFSK---EAEKEEVITFA----------------------M 210
+E+++S A F + ++ ++I F M
Sbjct: 242 -------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM 294
Query: 211 VAKRCLNLNGKKQPTMKEVTLELAGIRASIGA 242
+ C N N ++P+ +++ L + IR +
Sbjct: 295 IMTECWNNNVNQRPSFRDLALRVDQIRDQMAG 326
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C ++ EF+ G+L Y+ E ++
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV- 116
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H D+ + N L+ + + K++DF + D
Sbjct: 117 -VLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ ++F+ KSDV++F V+L E+
Sbjct: 173 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 120/272 (44%), Gaps = 48/272 (17%)
Query: 3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVP--LLVYEFIPNGS 60
E+ +KK + E ++ F E+ IL + H N+VK G C L+ E++P GS
Sbjct: 43 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 102
Query: 61 LYQYI--HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY 118
L Y+ H + D + + L+ T ++ + + YL + I H D+ + NIL+ ++
Sbjct: 103 LRDYLQAHAERIDHIKL-----LQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 154
Query: 119 QAKISDFRTFKSRAIDRTHLTTQ---VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ KI DF K D+ + F Y P+ S+F+ SDV+SF VVL EL
Sbjct: 155 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYEL 213
Query: 176 NWTKPIHLVDVEENRSLAAYFSK---EAEKEEVITFA----------------------M 210
+E+++S A F + ++ ++I F M
Sbjct: 214 -------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM 266
Query: 211 VAKRCLNLNGKKQPTMKEVTLELAGIRASIGA 242
+ C N N ++P+ +++ L + IR ++
Sbjct: 267 IMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 298
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 48/270 (17%)
Query: 3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVP--LLVYEFIPNGS 60
E+ +KK + E ++ F E+ IL + H N+VK G C L+ E++P GS
Sbjct: 58 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 117
Query: 61 LYQYI--HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY 118
L Y+ H++ D + + L+ T ++ + + YL + I H D+ + NIL+ ++
Sbjct: 118 LRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 169
Query: 119 QAKISDFRTFKSRAIDRTHLTTQ---VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ KI DF K D+ + F Y P+ S+F+ SDV+SF VVL EL
Sbjct: 170 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYEL 228
Query: 176 NWTKPIHLVDVEENRSLAAYFSK---EAEKEEVITFA----------------------M 210
+E+++S A F + ++ ++I F M
Sbjct: 229 -------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM 281
Query: 211 VAKRCLNLNGKKQPTMKEVTLELAGIRASI 240
+ C N N ++P+ +++ L + IR ++
Sbjct: 282 IMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 48/272 (17%)
Query: 3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVP--LLVYEFIPNGS 60
E+ +KK + E ++ F E+ IL + H N+VK G C L+ E++P GS
Sbjct: 41 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 100
Query: 61 LYQYI--HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY 118
L Y+ H++ D + + L+ T ++ + + YL + I H ++ + NIL+ ++
Sbjct: 101 LRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTKRYI---HRNLATRNILVENEN 152
Query: 119 QAKISDFRTFKSRAIDRTHLTTQ---VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ KI DF K D+ + + F Y P+ S+F+ SDV+SF VVL EL
Sbjct: 153 RVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYEL 211
Query: 176 NWTKPIHLVDVEENRSLAAYFSK---EAEKEEVITFA----------------------M 210
+E+++S A F + ++ ++I F M
Sbjct: 212 -------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM 264
Query: 211 VAKRCLNLNGKKQPTMKEVTLELAGIRASIGA 242
+ C N N ++P+ +++ L + IR ++
Sbjct: 265 IMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 296
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C ++ EF+ G+L Y+ E ++
Sbjct: 260 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV- 318
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H ++ + N L+ + + K++DF + D
Sbjct: 319 -VLLYMATQISSAMEYLEKKNFI---HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 374
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ ++F+ KSDV++F V+L E+
Sbjct: 375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 15/181 (8%)
Query: 7 LKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH 66
+K K ES + F E +L+ + H+++V+ G C E L+V+E++ +G L +++
Sbjct: 47 VKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLR 106
Query: 67 EQTDDQ-----------LPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLV 115
D P+ L + +V+ + YL A + H D+ + N L+
Sbjct: 107 SHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVG 163
Query: 116 DKYQAKISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE 174
KI DF + + D + + + ++ P+ +FT +SDV+SF VVL E
Sbjct: 164 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWE 223
Query: 175 L 175
+
Sbjct: 224 I 224
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 15/181 (8%)
Query: 7 LKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH 66
+K K ES + F E +L+ + H+++V+ G C E L+V+E++ +G L +++
Sbjct: 76 VKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLR 135
Query: 67 EQTDDQ-----------LPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLV 115
D P+ L + +V+ + YL A + H D+ + N L+
Sbjct: 136 SHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVG 192
Query: 116 DKYQAKISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE 174
KI DF + + D + + + ++ P+ +FT +SDV+SF VVL E
Sbjct: 193 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWE 252
Query: 175 L 175
+
Sbjct: 253 I 253
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 15/181 (8%)
Query: 7 LKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH 66
+K K ES + F E +L+ + H+++V+ G C E L+V+E++ +G L +++
Sbjct: 53 VKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLR 112
Query: 67 EQTDDQ-----------LPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLV 115
D P+ L + +V+ + YL A + H D+ + N L+
Sbjct: 113 SHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVG 169
Query: 116 DKYQAKISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE 174
KI DF + + D + + + ++ P+ +FT +SDV+SF VVL E
Sbjct: 170 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWE 229
Query: 175 L 175
+
Sbjct: 230 I 230
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C ++ EF+ G+L Y+ E ++
Sbjct: 257 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV- 315
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H ++ + N L+ + + K++DF + D
Sbjct: 316 -VLLYMATQISSAMEYLEKKNFI---HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 371
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ ++F+ KSDV++F V+L E+
Sbjct: 372 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 409
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
VE+F+ E ++ +I H N+V++LG C ++ EF+ G+L Y+ E ++
Sbjct: 299 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV- 357
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ L + ++S + YL I H ++ + N L+ + + K++DF + D
Sbjct: 358 -VLLYMATQISSAMEYLEKKNFI---HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 413
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + P+ ++F+ KSDV++F V+L E+
Sbjct: 414 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 451
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 27/216 (12%)
Query: 24 EVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRI 83
E+ +LSQ + V K G L+ ++ E++ GS + D+ I ++
Sbjct: 71 EITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK--- 127
Query: 84 TVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVK 143
E+ + L YLHS I H DIK+AN+LL ++ K++DF + T V
Sbjct: 128 --EILKGLDYLHSEKKI---HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVG 182
Query: 144 VTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP----------IHLVDVEENRSLA 193
F ++ P+ + S + K+D++S + +EL +P + L+ +L
Sbjct: 183 TPF-WMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLV 241
Query: 194 AYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
F+K +F CLN + +PT KE+
Sbjct: 242 GDFTK--------SFKEFIDACLNKDPSFRPTAKEL 269
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 120/272 (44%), Gaps = 31/272 (11%)
Query: 3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLY 62
E+ ++K+ E F+ EV ++ + H NV+K +G + + + E+I G+L
Sbjct: 36 EVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLR 95
Query: 63 QYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKI 122
I + D Q P W R+ +++ ++YLHS+ I H D+ S N L+ + +
Sbjct: 96 GII-KSMDSQYP--WSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVV 149
Query: 123 SDF----------------RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVY 166
+DF R+ K DR T V + ++ P+ + EK DV+
Sbjct: 150 ADFGLARLMVDEKTQPEGLRSLKK--PDRKKRYTVVGNPY-WMAPEMINGRSYDEKVDVF 206
Query: 167 SFSVVLVELNW---TKPIHLVDVEE-NRSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKK 222
SF +VL E+ P +L + ++ + + +F + RC +L+ +K
Sbjct: 207 SFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEK 266
Query: 223 QPTMKEVTLELAGIRASIGASVLL--QCEEIN 252
+P+ ++ L +R + + L Q E+++
Sbjct: 267 RPSFVKLEHWLETLRMHLAGHLPLGPQLEQLD 298
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 86/173 (49%), Gaps = 23/173 (13%)
Query: 11 KSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
+ +++ E+ + E I+ Q+++ +V+++G C + E +LV E G L++++
Sbjct: 373 QGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFL----- 426
Query: 71 DQLPITWEMRLRITVEVSRVLSYLHSVASIPIY-------HLDIKSANILLVDKYQAKIS 123
+ R + VS V LH V+ Y H ++ + N+LLV+++ AKIS
Sbjct: 427 --------VGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKIS 478
Query: 124 DFRTFKSRAIDRTHLTTQV--KVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE 174
DF K+ D ++ T + K + P+ +F+ +SDV+S+ V + E
Sbjct: 479 DFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWE 531
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 27/217 (12%)
Query: 23 NEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLR 82
E+ +LSQ + V K G L+ ++ E++ GS + D+ I +R
Sbjct: 74 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR-- 131
Query: 83 ITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQV 142
E+ + L YLHS I H DIK+AN+LL + + K++DF + T V
Sbjct: 132 ---EILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV 185
Query: 143 KVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIH----------LVDVEENRSL 192
F ++ P+ + S + K+D++S + +EL +P H L+ +L
Sbjct: 186 GTPF-WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTL 244
Query: 193 AAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
+SK ++ + CLN +PT KE+
Sbjct: 245 EGNYSKPLKE--------FVEACLNKEPSFRPTAKEL 273
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 87/165 (52%), Gaps = 17/165 (10%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
++ F NEV +L + H N++ +G + ++ + V ++ SLY ++H +
Sbjct: 52 LQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHASE-----TKF 105
Query: 78 EMR--LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR--TFKSRAI 133
EM+ + I + +R + YLH+ + I H D+KS NI L + KI DF T KSR
Sbjct: 106 EMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSR-W 161
Query: 134 DRTHLTTQVKVTFGYVDPKYFR---SSQFTEKSDVYSFSVVLVEL 175
+H Q+ + ++ P+ R S+ ++ +SDVY+F +VL EL
Sbjct: 162 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYEL 206
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 27/217 (12%)
Query: 23 NEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLR 82
E+ +LSQ + V K G L+ ++ E++ GS + D+ I +R
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR-- 111
Query: 83 ITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQV 142
E+ + L YLHS I H DIK+AN+LL + + K++DF + T V
Sbjct: 112 ---EILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV 165
Query: 143 KVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIH----------LVDVEENRSL 192
F ++ P+ + S + K+D++S + +EL +P H L+ +L
Sbjct: 166 GTPF-WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTL 224
Query: 193 AAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
+SK ++ + CLN +PT KE+
Sbjct: 225 EGNYSKPLKE--------FVEACLNKEPSFRPTAKEL 253
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 87/165 (52%), Gaps = 17/165 (10%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
++ F NEV +L + H N++ +G + ++ + V ++ SLY ++H +
Sbjct: 64 LQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHASE-----TKF 117
Query: 78 EMR--LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR--TFKSRAI 133
EM+ + I + +R + YLH+ + I H D+KS NI L + KI DF T KSR
Sbjct: 118 EMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR-W 173
Query: 134 DRTHLTTQVKVTFGYVDPKYFR---SSQFTEKSDVYSFSVVLVEL 175
+H Q+ + ++ P+ R S+ ++ +SDVY+F +VL EL
Sbjct: 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYEL 218
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E E+ I +NH NVVK G E + L E+ G L+ I + D +P
Sbjct: 50 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 107
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RAIDRTH 137
R + V YLH + I H DIK N+LL ++ KISDF R +R
Sbjct: 108 QRFFHQLMAGVV--YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 138 LTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLV-----ELNWTKP 180
L ++ T YV P+ + +F E DV+S +VL EL W +P
Sbjct: 163 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 76/169 (44%), Gaps = 14/169 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E E+ I + +NH NVVK G E + L E+ G L+ I + D +P
Sbjct: 50 ENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 107
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RAIDRTH 137
R + V YLH + I H DIK N+LL ++ KISDF R +R
Sbjct: 108 QRFFHQLMAGVV--YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 138 LTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLV-----ELNWTKP 180
L ++ T YV P+ + +F E DV+S +VL EL W +P
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E E+ I +NH NVVK G E + L E+ G L+ I + D +P
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RAIDRTH 137
R + V YLH + I H DIK N+LL ++ KISDF R +R
Sbjct: 107 QRFFHQLMAGVV--YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 138 LTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLV-----ELNWTKP 180
L ++ T YV P+ + +F E DV+S +VL EL W +P
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E E+ I +NH NVVK G E + L E+ G L+ I + D +P
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RAIDRTH 137
R + V YLH + I H DIK N+LL ++ KISDF R +R
Sbjct: 107 QRFFHQLMAGVV--YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 138 LTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLV-----ELNWTKP 180
L ++ T YV P+ + +F E DV+S +VL EL W +P
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 84/172 (48%), Gaps = 11/172 (6%)
Query: 12 SVHESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQT- 69
+ H E ++E+ I+S + H N+V +LG C L++ E+ G L ++ +
Sbjct: 79 TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAE 138
Query: 70 -----DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+D P+ L + +V++ +++L S I H D+ + N+LL + + AKI D
Sbjct: 139 ADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGD 195
Query: 125 FRTFKSRAIDRTHLT-TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F + D ++ ++ ++ P+ +T +SDV+S+ ++L E+
Sbjct: 196 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 247
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E E+ I +NH NVVK G E + L E+ G L+ I + D +P
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RAIDRTH 137
R + V YLH + I H DIK N+LL ++ KISDF R +R
Sbjct: 107 QRFFHQLMAGVV--YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 138 LTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLV-----ELNWTKP 180
L ++ T YV P+ + +F E DV+S +VL EL W +P
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 85/159 (53%), Gaps = 12/159 (7%)
Query: 21 FINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
F+ E I+ Q +H N++++ G + + +++ E++ NG+L +++ E+ D + +
Sbjct: 93 FLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREK-DGEFSV----- 146
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI----DRT 136
L++ + + + + +A++ H D+ + NIL+ K+SDF SR + + T
Sbjct: 147 LQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGL--SRVLEDDPEAT 204
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ T+ K+ + P+ +FT SDV+SF +V+ E+
Sbjct: 205 YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEV 243
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 115/236 (48%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L++ + +P G L Y+ E D+ I +
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN---IGSQ 119
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 120 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 236
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ ++C ++ +P +E+ +E + + +++Q +E
Sbjct: 237 GERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 292
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E E+ I +NH NVVK G E + L E+ G L+ I + D +P
Sbjct: 49 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RAIDRTH 137
R + V YLH + I H DIK N+LL ++ KISDF R +R
Sbjct: 107 QRFFHQLMAGVV--YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 138 LTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLV-----ELNWTKP 180
L ++ T YV P+ + +F E DV+S +VL EL W +P
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E F++E I+ Q +H N++++ G + ++V E++ NGSL ++ D Q
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH-DGQFT 149
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI- 133
I +++ + V + + ++ + H D+ + N+L+ K+SDF SR +
Sbjct: 150 I-----MQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGL--SRVLE 202
Query: 134 ---DRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D + TT K+ + P+ F+ SDV+SF VV+ E+
Sbjct: 203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEV 247
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 84/172 (48%), Gaps = 11/172 (6%)
Query: 12 SVHESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQT- 69
+ H E ++E+ I+S + H N+V +LG C L++ E+ G L ++ +
Sbjct: 87 TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAE 146
Query: 70 -----DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+D P+ L + +V++ +++L S I H D+ + N+LL + + AKI D
Sbjct: 147 ADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGD 203
Query: 125 FRTFKSRAIDRTHLT-TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F + D ++ ++ ++ P+ +T +SDV+S+ ++L E+
Sbjct: 204 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 255
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 98/222 (44%), Gaps = 17/222 (7%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH------EQTDDQL 73
+F+NE ++ +VV++LG + + L+V E + +G L Y+ E +
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RA 132
P T + +++ E++ ++YL++ + H D+ + N ++ + KI DF +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENR 190
D + + ++ P+ + FT SD++SF VVL E+ +P + E+
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
Query: 191 SL---AAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
Y + E +T M + C N K +PT E+
Sbjct: 243 KFVMDGGYLDQPDNCPERVTDLM--RMCWQFNPKMRPTFLEI 282
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E E+ I +NH NVVK G E + L E+ G L+ I + D +P
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 107
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RAIDRTH 137
R + V YLH + I H DIK N+LL ++ KISDF R +R
Sbjct: 108 QRFFHQLMAGVV--YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 138 LTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLV-----ELNWTKP 180
L ++ T YV P+ + +F E DV+S +VL EL W +P
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E E+ I +NH NVVK G E + L E+ G L+ I + D +P
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 107
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RAIDRTH 137
R + V YLH + I H DIK N+LL ++ KISDF R +R
Sbjct: 108 QRFFHQLMAGVV--YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 138 LTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLV-----ELNWTKP 180
L ++ T YV P+ + +F E DV+S +VL EL W +P
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E E+ I +NH NVVK G E + L E+ G L+ I + D +P
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 107
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RAIDRTH 137
R + V YLH + I H DIK N+LL ++ KISDF R +R
Sbjct: 108 QRFFHQLMAGVV--YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 138 LTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLV-----ELNWTKP 180
L ++ T YV P+ + +F E DV+S +VL EL W +P
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 86/165 (52%), Gaps = 17/165 (10%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
++ F NEV +L + H N++ +G ++ + V ++ SLY ++H +
Sbjct: 64 LQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAI-VTQWCEGSSLYHHLHASE-----TKF 117
Query: 78 EMR--LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR--TFKSRAI 133
EM+ + I + +R + YLH+ + I H D+KS NI L + KI DF T KSR
Sbjct: 118 EMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR-W 173
Query: 134 DRTHLTTQVKVTFGYVDPKYFR---SSQFTEKSDVYSFSVVLVEL 175
+H Q+ + ++ P+ R S+ ++ +SDVY+F +VL EL
Sbjct: 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYEL 218
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 116/239 (48%), Gaps = 15/239 (6%)
Query: 10 SKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETE-VPLLVYEFIPNGSLYQYIHEQ 68
S+ VE F+ E +++ +NH NV+ ++G L E +P ++ ++ +G L Q+I +
Sbjct: 58 SRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFI--R 115
Query: 69 TDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTF 128
+ + P ++ + ++V+R + YL A H D+ + N +L + + K++DF
Sbjct: 116 SPQRNPTVKDL-ISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLA 171
Query: 129 KSRAIDRTHLTTQ----VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL--NWTKPIH 182
+ +DR + + Q ++ + + ++ +FT KSDV+SF V+L EL P
Sbjct: 172 RD-ILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYR 230
Query: 183 LVDVEENRSLAAYFSKEAEKEEVI-TFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASI 240
+D + A + + E + V ++C + +PT + + E+ I +++
Sbjct: 231 HIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 98/222 (44%), Gaps = 17/222 (7%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH------EQTDDQL 73
+F+NE ++ +VV++LG + + L+V E + +G L Y+ E +
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RA 132
P T + +++ E++ ++YL++ + H D+ + N ++ + KI DF +
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRDIXE 179
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENR 190
D + + ++ P+ + FT SD++SF VVL E+ +P + E+
Sbjct: 180 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 239
Query: 191 SL---AAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
Y + E +T M + C N K +PT E+
Sbjct: 240 KFVMDGGYLDQPDNCPERVTDLM--RMCWQFNPKMRPTFLEI 279
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E E+ I +NH NVVK G E + L E+ G L+ I + D +P
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 107
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RAIDRTH 137
R + V YLH + I H DIK N+LL ++ KISDF R +R
Sbjct: 108 QRFFHQLMAGVV--YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 138 LTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLV-----ELNWTKP 180
L ++ T YV P+ + +F E DV+S +VL EL W +P
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E E+ I +NH NVVK G E + L E+ G L+ I + D +P
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 107
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RAIDRTH 137
R + V YLH + I H DIK N+LL ++ KISDF R +R
Sbjct: 108 QRFFHQLMAGVV--YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 138 LTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLV-----ELNWTKP 180
L ++ T YV P+ + +F E DV+S +VL EL W +P
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E E+ I +NH NVVK G E + L E+ G L+ I + D +P
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RAIDRTH 137
R + V YLH + I H DIK N+LL ++ KISDF R +R
Sbjct: 107 QRFFHQLMAGVV--YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 138 LTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLV-----ELNWTKP 180
L ++ T YV P+ + +F E DV+S +VL EL W +P
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E E+ I +NH NVVK G E + L E+ G L+ I + D +P
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RAIDRTH 137
R + V YLH + I H DIK N+LL ++ KISDF R +R
Sbjct: 107 QRFFHQLMAGVV--YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 138 LTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLV-----ELNWTKP 180
L ++ T YV P+ + +F E DV+S +VL EL W +P
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E E+ I +NH NVVK G E + L E+ G L+ I + D +P
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RAIDRTH 137
R + V YLH + I H DIK N+LL ++ KISDF R +R
Sbjct: 107 QRFFHQLMAGVV--YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 138 LTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLV-----ELNWTKP 180
L ++ T YV P+ + +F E DV+S +VL EL W +P
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 114/236 (48%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L+ + +P G L Y+ E D+ I +
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQ 119
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 120 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 236
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ ++C ++ +P +E+ +E + + +++Q +E
Sbjct: 237 GERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 292
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E E+ I +NH NVVK G E + L E+ G L+ I + D +P
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RAIDRTH 137
R + V YLH + I H DIK N+LL ++ KISDF R +R
Sbjct: 107 QRFFHQLMAGVV--YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 138 LTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLV-----ELNWTKP 180
L ++ T YV P+ + +F E DV+S +VL EL W +P
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E E+ I +NH NVVK G E + L E+ G L+ I + D +P
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RAIDRTH 137
R + V YLH + I H DIK N+LL ++ KISDF R +R
Sbjct: 107 QRFFHQLMAGVV--YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 138 LTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLV-----ELNWTKP 180
L ++ T YV P+ + +F E DV+S +VL EL W +P
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 114/236 (48%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L+ + +P G L Y+ E D+ I +
Sbjct: 72 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQ 127
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 128 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 184
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 185 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 244
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ ++C ++ +P +E+ +E + + +++Q +E
Sbjct: 245 GERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 300
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E E+ I +NH NVVK G E + L E+ G L+ I + D +P
Sbjct: 48 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 105
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RAIDRTH 137
R + V YLH + I H DIK N+LL ++ KISDF R +R
Sbjct: 106 QRFFHQLMAGVV--YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 160
Query: 138 LTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLV-----ELNWTKP 180
L ++ T YV P+ + +F E DV+S +VL EL W +P
Sbjct: 161 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E E+ I +NH NVVK G E + L E+ G L+ I + D +P
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 107
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RAIDRTH 137
R + V YLH + I H DIK N+LL ++ KISDF R +R
Sbjct: 108 QRFFHQLMAGVV--YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 138 LTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLV-----ELNWTKP 180
L ++ T YV P+ + +F E DV+S +VL EL W +P
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E E+ I +NH NVVK G E + L E+ G L+ I + D +P
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RAIDRTH 137
R + V YLH + I H DIK N+LL ++ KISDF R +R
Sbjct: 107 QRFFHQLMAGVV--YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 138 LTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLV-----ELNWTKP 180
L ++ T YV P+ + +F E DV+S +VL EL W +P
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E E+ I +NH NVVK G E + L E+ G L+ I + D +P
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RAIDRTH 137
R + V YLH + I H DIK N+LL ++ KISDF R +R
Sbjct: 107 QRFFHQLMAGVV--YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 138 LTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLV-----ELNWTKP 180
L ++ T YV P+ + +F E DV+S +VL EL W +P
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 114/236 (48%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L+ + +P G L Y+ E D+ I +
Sbjct: 65 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQ 120
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 121 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 178 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 237
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ ++C ++ +P +E+ +E + + +++Q +E
Sbjct: 238 GERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 293
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 12/165 (7%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E F+ E I+ Q +H NVV + G + ++V EF+ NG+L ++ + D Q
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKH-DGQFT 143
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI- 133
+ +++ + + + + +A + H D+ + NIL+ K+SDF SR I
Sbjct: 144 V-----IQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGL--SRVIE 196
Query: 134 ---DRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ + TT K+ + P+ + +FT SDV+S+ +V+ E+
Sbjct: 197 DDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEV 241
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E E+ I +NH NVVK G E + L E+ G L+ I + D +P
Sbjct: 49 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RAIDRTH 137
R + V YLH + I H DIK N+LL ++ KISDF R +R
Sbjct: 107 QRFFHQLMAGVV--YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 138 LTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLV-----ELNWTKP 180
L ++ T YV P+ + +F E DV+S +VL EL W +P
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E F++E I+ Q +H N++++ G + ++V E++ NGSL ++ D Q
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH-DGQFT 149
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI- 133
I +++ + V + + ++ + H D+ + N+L+ K+SDF SR +
Sbjct: 150 I-----MQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGL--SRVLE 202
Query: 134 ---DRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D TT K+ + P+ F+ SDV+SF VV+ E+
Sbjct: 203 DDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEV 247
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 82/165 (49%), Gaps = 10/165 (6%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E F++E I+ Q +H NV+ + G ++ +++ EF+ NGSL ++ Q D Q
Sbjct: 75 EKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR-QNDGQFT 133
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSR 131
+ +++ + + + + +A + H D+ + NIL+ K+SDF R +
Sbjct: 134 V-----IQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 188
Query: 132 AIDRTHLTT-QVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D T+ + K+ + P+ + +FT SDV+S+ +V+ E+
Sbjct: 189 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEV 233
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 27/217 (12%)
Query: 23 NEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLR 82
E+ +LSQ + V K G L+ ++ E++ GS + D+ I +R
Sbjct: 69 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR-- 126
Query: 83 ITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQV 142
E+ + L YLHS I H DIK+AN+LL + + K++DF + V
Sbjct: 127 ---EILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV 180
Query: 143 KVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIH----------LVDVEENRSL 192
F ++ P+ + S + K+D++S + +EL +P H L+ +L
Sbjct: 181 GTPF-WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTL 239
Query: 193 AAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
+SK ++ + CLN +PT KE+
Sbjct: 240 EGNYSKPLKE--------FVEACLNKEPSFRPTAKEL 268
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 81/159 (50%), Gaps = 7/159 (4%)
Query: 17 NVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPIT 76
N E+F++E VI+ ++H ++VK++G +E E ++ E P G L Y+ + +T
Sbjct: 56 NKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLT 114
Query: 77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT 136
+ ++++ + ++YL S+ + H DI NIL+ K+ DF + +
Sbjct: 115 ---LVLYSLQICKAMAYLESINCV---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 168
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ + ++ ++ P+ +FT SDV+ F+V + E+
Sbjct: 169 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEI 207
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 107/220 (48%), Gaps = 11/220 (5%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L+ + +P G L Y+ E D+ I +
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQ 117
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 118 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 234
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELA 234
+ + I M+ ++C ++ +P +E+ +E +
Sbjct: 235 GERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFS 274
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 82/165 (49%), Gaps = 12/165 (7%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E F+ E I+ Q +H N++++ G +++ ++V E++ NGSL ++ + D Q
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFT 145
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI- 133
+ +++ + + S + ++ + H D+ + NIL+ K+SDF SR +
Sbjct: 146 V-----IQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGL--SRVLE 198
Query: 134 ---DRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ + T K+ + P+ +FT SDV+S+ +VL E+
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 90/170 (52%), Gaps = 14/170 (8%)
Query: 11 KSVHESNV--EQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHE 67
KS+ + ++ + F+ E ++ Q+ H+ +V++ T+ P+ ++ E++ NGSL ++
Sbjct: 43 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFL-- 98
Query: 68 QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRT 127
+T + +T L + +++ ++++ I H D+++ANIL+ D KI+DF
Sbjct: 99 KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL 155
Query: 128 FKSRAIDRTHLTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R I+ T + K + P+ FT KSDV+SF ++L E+
Sbjct: 156 --ARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 27/217 (12%)
Query: 23 NEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLR 82
E+ +LSQ + V K G L+ ++ E++ GS + D+ I +R
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR-- 111
Query: 83 ITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQV 142
E+ + L YLHS I H DIK+AN+LL + + K++DF + V
Sbjct: 112 ---EILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV 165
Query: 143 KVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIH----------LVDVEENRSL 192
F ++ P+ + S + K+D++S + +EL +P H L+ +L
Sbjct: 166 GTPF-WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTL 224
Query: 193 AAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
+SK ++ + CLN +PT KE+
Sbjct: 225 EGNYSKPLKE--------FVEACLNKEPSFRPTAKEL 253
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 90/170 (52%), Gaps = 14/170 (8%)
Query: 11 KSVHESNV--EQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHE 67
KS+ + ++ + F+ E ++ Q+ H+ +V++ T+ P+ ++ E++ NGSL ++
Sbjct: 43 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFL-- 98
Query: 68 QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRT 127
+T + +T L + +++ ++++ I H D+++ANIL+ D KI+DF
Sbjct: 99 KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL 155
Query: 128 FKSRAIDRTHLTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R I+ T + K + P+ FT KSDV+SF ++L E+
Sbjct: 156 --ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 90/170 (52%), Gaps = 14/170 (8%)
Query: 11 KSVHESNV--EQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHE 67
KS+ + ++ + F+ E ++ Q+ H+ +V++ T+ P+ ++ E++ NGSL ++
Sbjct: 44 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFL-- 99
Query: 68 QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRT 127
+T + +T L + +++ ++++ I H D+++ANIL+ D KI+DF
Sbjct: 100 KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL 156
Query: 128 FKSRAIDRTHLTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R I+ T + K + P+ FT KSDV+SF ++L E+
Sbjct: 157 --ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 204
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 81/159 (50%), Gaps = 7/159 (4%)
Query: 17 NVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPIT 76
N E+F++E VI+ ++H ++VK++G +E E ++ E P G L Y+ + +T
Sbjct: 52 NKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLT 110
Query: 77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT 136
+ ++++ + ++YL S+ + H DI NIL+ K+ DF + +
Sbjct: 111 ---LVLYSLQICKAMAYLESINCV---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 164
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ + ++ ++ P+ +FT SDV+ F+V + E+
Sbjct: 165 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEI 203
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 90/170 (52%), Gaps = 14/170 (8%)
Query: 11 KSVHESNV--EQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHE 67
KS+ + ++ + F+ E ++ Q+ H+ +V++ T+ P+ ++ E++ NGSL ++
Sbjct: 45 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFL-- 100
Query: 68 QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRT 127
+T + +T L + +++ ++++ I H D+++ANIL+ D KI+DF
Sbjct: 101 KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL 157
Query: 128 FKSRAIDRTHLTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R I+ T + K + P+ FT KSDV+SF ++L E+
Sbjct: 158 --ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 205
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 81/159 (50%), Gaps = 7/159 (4%)
Query: 17 NVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPIT 76
N E+F++E VI+ ++H ++VK++G +E E ++ E P G L Y+ + +T
Sbjct: 68 NKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLT 126
Query: 77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT 136
+ ++++ + ++YL S+ + H DI NIL+ K+ DF + +
Sbjct: 127 LVL---YSLQICKAMAYLESINCV---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 180
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ + ++ ++ P+ +FT SDV+ F+V + E+
Sbjct: 181 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEI 219
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 90/170 (52%), Gaps = 14/170 (8%)
Query: 11 KSVHESNV--EQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHE 67
KS+ + ++ + F+ E ++ Q+ H+ +V++ T+ P+ ++ E++ NGSL ++
Sbjct: 48 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFL-- 103
Query: 68 QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRT 127
+T + +T L + +++ ++++ I H D+++ANIL+ D KI+DF
Sbjct: 104 KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL 160
Query: 128 FKSRAIDRTHLTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R I+ T + K + P+ FT KSDV+SF ++L E+
Sbjct: 161 --ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 208
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 90/170 (52%), Gaps = 14/170 (8%)
Query: 11 KSVHESNV--EQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHE 67
KS+ + ++ + F+ E ++ Q+ H+ +V++ T+ P+ ++ E++ NGSL ++
Sbjct: 43 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFL-- 98
Query: 68 QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRT 127
+T + +T L + +++ ++++ I H D+++ANIL+ D KI+DF
Sbjct: 99 KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL 155
Query: 128 FKSRAIDRTHLTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R I+ T + K + P+ FT KSDV+SF ++L E+
Sbjct: 156 --ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 90/170 (52%), Gaps = 14/170 (8%)
Query: 11 KSVHESNV--EQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHE 67
KS+ + ++ + F+ E ++ Q+ H+ +V++ T+ P+ ++ E++ NGSL ++
Sbjct: 49 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFL-- 104
Query: 68 QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRT 127
+T + +T L + +++ ++++ I H D+++ANIL+ D KI+DF
Sbjct: 105 KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL 161
Query: 128 FKSRAIDRTHLTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R I+ T + K + P+ FT KSDV+SF ++L E+
Sbjct: 162 --ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 209
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 90/170 (52%), Gaps = 14/170 (8%)
Query: 11 KSVHESNV--EQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHE 67
KS+ + ++ + F+ E ++ Q+ H+ +V++ T+ P+ ++ E++ NGSL ++
Sbjct: 51 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFL-- 106
Query: 68 QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRT 127
+T + +T L + +++ ++++ I H D+++ANIL+ D KI+DF
Sbjct: 107 KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL 163
Query: 128 FKSRAIDRTHLTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R I+ T + K + P+ FT KSDV+SF ++L E+
Sbjct: 164 --ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 211
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 90/170 (52%), Gaps = 14/170 (8%)
Query: 11 KSVHESNV--EQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHE 67
KS+ + ++ + F+ E ++ Q+ H+ +V++ T+ P+ ++ E++ NGSL ++
Sbjct: 43 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFL-- 98
Query: 68 QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRT 127
+T + +T L + +++ ++++ I H D+++ANIL+ D KI+DF
Sbjct: 99 KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL 155
Query: 128 FKSRAIDRTHLTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R I+ T + K + P+ FT KSDV+SF ++L E+
Sbjct: 156 --ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 90/170 (52%), Gaps = 14/170 (8%)
Query: 11 KSVHESNV--EQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHE 67
KS+ + ++ + F+ E ++ Q+ H+ +V++ T+ P+ ++ E++ NGSL ++
Sbjct: 49 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFL-- 104
Query: 68 QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRT 127
+T + +T L + +++ ++++ I H D+++ANIL+ D KI+DF
Sbjct: 105 KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL 161
Query: 128 FKSRAIDRTHLTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R I+ T + K + P+ FT KSDV+SF ++L E+
Sbjct: 162 --ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 209
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 80/163 (49%), Gaps = 8/163 (4%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E F+ E I+ Q +H N++++ G +++ ++V E++ NGSL ++ + D Q
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFT 145
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAID 134
+ +++ + + S + ++ + H D+ + NIL+ K+SDF + D
Sbjct: 146 V-----IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200
Query: 135 --RTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ T K+ + P+ +FT SDV+S+ +VL E+
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 90/170 (52%), Gaps = 14/170 (8%)
Query: 11 KSVHESNV--EQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHE 67
KS+ + ++ + F+ E ++ Q+ H+ +V++ T+ P+ ++ E++ NGSL ++
Sbjct: 52 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFL-- 107
Query: 68 QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRT 127
+T + +T L + +++ ++++ I H D+++ANIL+ D KI+DF
Sbjct: 108 KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL 164
Query: 128 FKSRAIDRTHLTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R I+ T + K + P+ FT KSDV+SF ++L E+
Sbjct: 165 --ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 212
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 80/163 (49%), Gaps = 8/163 (4%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E F+ E I+ Q +H N++++ G +++ ++V E++ NGSL ++ + D Q
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFT 145
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAID 134
+ +++ + + S + ++ + H D+ + NIL+ K+SDF + D
Sbjct: 146 V-----IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDD 200
Query: 135 --RTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ T K+ + P+ +FT SDV+S+ +VL E+
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 21/224 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH------EQTDDQL 73
+F+NE ++ +VV++LG + + L+V E + +G L Y+ E +
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKS 130
P T + +++ E++ ++YL++ + H D+ + N ++ + KI DF R
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 131 RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEE 188
A R + V ++ P+ + FT SD++SF VVL E+ +P + E+
Sbjct: 183 TAYYRKGGKGLLPVR--WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
Query: 189 NRSL---AAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
Y + E +T M + C N K +PT E+
Sbjct: 241 VLKFVMDGGYLDQPDNCPERVTDLM--RMCWQFNPKMRPTFLEI 282
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 82/165 (49%), Gaps = 12/165 (7%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E F+ E I+ Q +H N++++ G +++ ++V E++ NGSL ++ + D Q
Sbjct: 58 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFT 116
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI- 133
+ +++ + + S + ++ + H D+ + NIL+ K+SDF SR +
Sbjct: 117 V-----IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL--SRVLE 169
Query: 134 ---DRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ + T K+ + P+ +FT SDV+S+ +VL E+
Sbjct: 170 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 214
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 82/165 (49%), Gaps = 12/165 (7%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E F+ E I+ Q +H N++++ G +++ ++V E++ NGSL ++ + D Q
Sbjct: 75 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFT 133
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI- 133
+ +++ + + S + ++ + H D+ + NIL+ K+SDF SR +
Sbjct: 134 V-----IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL--SRVLE 186
Query: 134 ---DRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ + T K+ + P+ +FT SDV+S+ +VL E+
Sbjct: 187 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 231
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 90/170 (52%), Gaps = 14/170 (8%)
Query: 11 KSVHESNV--EQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHE 67
KS+ + ++ + F+ E ++ Q+ H+ +V++ T+ P+ ++ E++ NGSL ++
Sbjct: 53 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFL-- 108
Query: 68 QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRT 127
+T + +T L + +++ ++++ I H D+++ANIL+ D KI+DF
Sbjct: 109 KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL 165
Query: 128 FKSRAIDRTHLTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R I+ T + K + P+ FT KSDV+SF ++L E+
Sbjct: 166 --ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 213
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 90/170 (52%), Gaps = 14/170 (8%)
Query: 11 KSVHESNV--EQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHE 67
KS+ + ++ + F+ E ++ Q+ H+ +V++ T+ P+ ++ E++ NGSL ++
Sbjct: 38 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFL-- 93
Query: 68 QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRT 127
+T + +T L + +++ ++++ I H D+++ANIL+ D KI+DF
Sbjct: 94 KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL 150
Query: 128 FKSRAIDRTHLTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R I+ T + K + P+ FT KSDV+SF ++L E+
Sbjct: 151 --ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 198
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 82/165 (49%), Gaps = 12/165 (7%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E F+ E I+ Q +H N++++ G +++ ++V E++ NGSL ++ + D Q
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFT 145
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI- 133
+ +++ + + S + ++ + H D+ + NIL+ K+SDF SR +
Sbjct: 146 V-----IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL--SRVLE 198
Query: 134 ---DRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ + T K+ + P+ +FT SDV+S+ +VL E+
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 75/157 (47%), Gaps = 6/157 (3%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++FI E ++ ++H +V++ G C + ++ E++ NG L Y+ E +
Sbjct: 64 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQ 120
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
L + +V + YL S + H D+ + N L+ D+ K+SDF + D
Sbjct: 121 QLLEMCKDVCEAMEYLESKQFL---HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETS 177
Query: 139 TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ K + P+ S+F+ KSD+++F V++ E+
Sbjct: 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 82/165 (49%), Gaps = 12/165 (7%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E F+ E I+ Q +H N++++ G +++ ++V E++ NGSL ++ + D Q
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFT 145
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI- 133
+ +++ + + S + ++ + H D+ + NIL+ K+SDF SR +
Sbjct: 146 V-----IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL--SRVLE 198
Query: 134 ---DRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ + T K+ + P+ +FT SDV+S+ +VL E+
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 82/165 (49%), Gaps = 12/165 (7%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E F+ E I+ Q +H N++++ G +++ ++V E++ NGSL ++ + D Q
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFT 145
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI- 133
+ +++ + + S + ++ + H D+ + NIL+ K+SDF SR +
Sbjct: 146 V-----IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL--SRVLE 198
Query: 134 ---DRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ + T K+ + P+ +FT SDV+S+ +VL E+
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 17/175 (9%)
Query: 15 ESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
E ++ ++E+ ++ I H+N++ +LG C + ++ E+ G+L +Y+ + +
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 74 PITWEMR------------LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
++++ + T +++R + YL S I H D+ + N+L+ + K
Sbjct: 141 EXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMK 197
Query: 122 ISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
I+DF + ID TT ++ ++ P+ +T +SDV+SF V++ E+
Sbjct: 198 IADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 114/236 (48%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L++ + +P G L Y+ E D+ I +
Sbjct: 66 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN---IGSQ 121
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 122 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 178
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 179 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 238
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ +C ++ +P +E+ +E + + +++Q +E
Sbjct: 239 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 294
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 80/163 (49%), Gaps = 8/163 (4%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E F+ E I+ Q +H N++++ G +++ ++V E++ NGSL ++ + D Q
Sbjct: 85 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFT 143
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAID 134
+ +++ + + S + ++ + H D+ + NIL+ K+SDF + D
Sbjct: 144 V-----IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 198
Query: 135 --RTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ T K+ + P+ +FT SDV+S+ +VL E+
Sbjct: 199 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 241
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 80/163 (49%), Gaps = 8/163 (4%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E F+ E I+ Q +H N++++ G +++ ++V E++ NGSL ++ + D Q
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFT 145
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAID 134
+ +++ + + S + ++ + H D+ + NIL+ K+SDF + D
Sbjct: 146 V-----IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 135 --RTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ T K+ + P+ +FT SDV+S+ +VL E+
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 98/222 (44%), Gaps = 17/222 (7%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH------EQTDDQL 73
+F+NE ++ +VV++LG + + L+V E + +G L Y+ E +
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RA 132
P T + +++ E++ ++YL++ + H D+ + N ++ + KI DF +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENR 190
D + + ++ P+ + FT SD++SF VVL E+ +P + E+
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
Query: 191 SL---AAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
Y + E +T M + C N K +PT E+
Sbjct: 243 KFVMDGGYLDQPDNCPERVTDLM--RMCWQFNPKMRPTFLEI 282
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH------EQTDDQL 73
+F+NE ++ +VV++LG + + L+V E + +G L Y+ E +
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RA 132
P T + +++ E++ ++YL++ + H D+ + N ++ + KI DF +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENR 190
D + + ++ P+ + FT SD++SF VVL E+ +P + E+
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
Query: 191 SL---AAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
Y + E +T M + C N +PT E+
Sbjct: 243 KFVMDGGYLDQPDNCPERVTDLM--RMCWQFNPNMRPTFLEI 282
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 107/241 (44%), Gaps = 20/241 (8%)
Query: 15 ESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
E ++ I+E+ ++ I H+N++ +LG C + ++ E+ G+L +Y+ + L
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 133
Query: 74 PITWEMR------------LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
++ + +V+R + YL S I H D+ + N+L+ + K
Sbjct: 134 EFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMK 190
Query: 122 ISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WT 178
I+DF + ID TT ++ ++ P+ +T +SDV+SF V+L E+
Sbjct: 191 IADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
Query: 179 KPIHLVDVEENRSLAAYFSKEAEKEEVIT-FAMVAKRCLNLNGKKQPTMKEVTLELAGIR 237
P V VEE L + + M+ + C + ++PT K++ +L I
Sbjct: 251 SPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
Query: 238 A 238
A
Sbjct: 311 A 311
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 98/222 (44%), Gaps = 17/222 (7%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH------EQTDDQL 73
+F+NE ++ +VV++LG + + L+V E + +G L Y+ E +
Sbjct: 65 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 124
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RA 132
P T + +++ E++ ++YL++ + H D+ + N ++ + KI DF +
Sbjct: 125 PPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRDIYE 181
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENR 190
D + + ++ P+ + FT SD++SF VVL E+ +P + E+
Sbjct: 182 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 241
Query: 191 SL---AAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
Y + E +T M + C N K +PT E+
Sbjct: 242 KFVMDGGYLDQPDNCPERVTDLM--RMCWQFNPKMRPTFLEI 281
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 114/236 (48%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L++ + +P G L Y+ E D+ I +
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN---IGSQ 119
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 120 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 176
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 236
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ +C ++ +P +E+ +E + + +++Q +E
Sbjct: 237 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 292
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++FI E ++ ++H +V++ G C + ++ E++ NG L Y+ E +
Sbjct: 64 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQ 120
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
L + +V + YL S + H D+ + N L+ D+ K+SDF SR +
Sbjct: 121 QLLEMCKDVCEAMEYLESKQFL---HRDLAARNCLVNDQGVVKVSDFGL--SRYVLDDEY 175
Query: 139 TTQVKVTFG--YVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
T+ V F + P+ S+F+ KSD+++F V++ E+
Sbjct: 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 114/236 (48%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L++ + +P G L Y+ E D+ I +
Sbjct: 63 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN---IGSQ 118
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 119 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 175
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 176 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 235
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ +C ++ +P +E+ +E + + +++Q +E
Sbjct: 236 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 291
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 114/236 (48%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L++ + +P G L Y+ E D+ I +
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN---IGSQ 119
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 120 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 236
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ +C ++ +P +E+ +E + + +++Q +E
Sbjct: 237 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 292
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 114/236 (48%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L++ + +P G L Y+ E D+ I +
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN---IGSQ 117
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 118 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 234
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ +C ++ +P +E+ +E + + +++Q +E
Sbjct: 235 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 290
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Query: 7 LKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH 66
+K K ++ + F E +L+ + H ++VK G C+E + ++V+E++ +G L +++
Sbjct: 48 VKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLR 107
Query: 67 EQTDDQL---------PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDK 117
D + +T L I +++ + YL AS H D+ + N L+ +
Sbjct: 108 AHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGEN 164
Query: 118 YQAKISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
KI DF + + D + + ++ P+ +FT +SDV+S VVL E+
Sbjct: 165 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI 223
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 114/236 (48%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L++ + +P G L Y+ E D+ I +
Sbjct: 69 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN---IGSQ 124
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 125 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 181
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 182 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 241
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ +C ++ +P +E+ +E + + +++Q +E
Sbjct: 242 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 297
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 114/236 (48%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L++ + +P G L Y+ E D+ I +
Sbjct: 65 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN---IGSQ 120
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 121 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 178 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 237
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ +C ++ +P +E+ +E + + +++Q +E
Sbjct: 238 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 293
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 17/175 (9%)
Query: 15 ESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
E ++ ++E+ ++ I H+N++ +LG C + ++ E+ G+L +Y+ + +
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 74 PITWEMR------------LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
++++ + T +++R + YL S I H D+ + N+L+ + K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMK 197
Query: 122 ISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
I+DF + ID TT ++ ++ P+ +T +SDV+SF V++ E+
Sbjct: 198 IADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++FI E ++ ++H +V++ G C + ++ E++ NG L Y+ E + +
Sbjct: 55 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQ 111
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
L + +V + YL S + H D+ + N L+ D+ K+SDF SR +
Sbjct: 112 QLLEMCKDVCEAMEYLESKQFL---HRDLAARNCLVNDQGVVKVSDFGL--SRYVLDDEY 166
Query: 139 TTQVKVTFG--YVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
T+ V F + P+ S+F+ KSD+++F V++ E+
Sbjct: 167 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 205
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++FI E ++ ++H +V++ G C + ++ E++ NG L Y+ E +
Sbjct: 49 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQ 105
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
L + +V + YL S + H D+ + N L+ D+ K+SDF SR +
Sbjct: 106 QLLEMCKDVCEAMEYLESKQFL---HRDLAARNCLVNDQGVVKVSDFGL--SRYVLDDEY 160
Query: 139 TTQVKVTFG--YVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
T+ V F + P+ S+F+ KSD+++F V++ E+
Sbjct: 161 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 199
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 114/236 (48%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L++ + +P G L Y+ E D+ I +
Sbjct: 66 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN---IGSQ 121
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 122 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 178
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 179 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 238
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ +C ++ +P +E+ +E + + +++Q +E
Sbjct: 239 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 294
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 114/236 (48%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L++ + +P G L Y+ E D+ I +
Sbjct: 63 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDN---IGSQ 118
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 119 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 175
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 176 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 235
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ +C ++ +P +E+ +E + + +++Q +E
Sbjct: 236 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 291
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++FI E ++ ++H +V++ G C + ++ E++ NG L Y+ E + +
Sbjct: 48 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQ 104
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
L + +V + YL S + H D+ + N L+ D+ K+SDF SR +
Sbjct: 105 QLLEMCKDVCEAMEYLESKQFL---HRDLAARNCLVNDQGVVKVSDFGL--SRYVLDDEY 159
Query: 139 TTQVKVTFG--YVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
T+ V F + P+ S+F+ KSD+++F V++ E+
Sbjct: 160 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 198
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 19/230 (8%)
Query: 12 SVHESNVEQFINEVVILSQINHRNVVKILGCCLE-TEVPL-LVYEFIPNGSLYQYIHEQT 69
S+ E+ + ++EV +L ++ H N+V+ ++ T L +V E+ G L I + T
Sbjct: 43 SMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGT 102
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLH--SVASIPIYHLDIKSANILLVDKYQAKISDFRT 127
++ + E LR+ +++ L H S + H D+K AN+ L K K+ DF
Sbjct: 103 KERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 162
Query: 128 FKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLV--- 184
+ D + T V + Y+ P+ + EKSD++S +L EL P
Sbjct: 163 ARILNHDTSFAKTFVGTPY-YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ 221
Query: 185 -----DVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
+ E + + E E+IT R LNL +P+++E+
Sbjct: 222 KELAGKIREGKFRRIPYRYSDELNEIIT------RMLNLKDYHRPSVEEI 265
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 113/236 (47%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L+ + +P G L Y+ E D+ I +
Sbjct: 69 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQ 124
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 125 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 181
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 182 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 241
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ +C ++ +P +E+ +E + + +++Q +E
Sbjct: 242 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 297
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 113/236 (47%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L+ + +P G L Y+ E D+ I +
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQ 117
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 118 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 234
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ +C ++ +P +E+ +E + + +++Q +E
Sbjct: 235 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 290
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 113/236 (47%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L+ + +P G L Y+ E D+ I +
Sbjct: 69 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQ 124
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 125 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 181
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 182 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 241
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ +C ++ +P +E+ +E + + +++Q +E
Sbjct: 242 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 297
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 113/236 (47%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L+ + +P G L Y+ E D+ I +
Sbjct: 69 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQ 124
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 125 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 181
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 182 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 241
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ +C ++ +P +E+ +E + + +++Q +E
Sbjct: 242 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 297
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 113/236 (47%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L+ + +P G L Y+ E D+ I +
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQ 117
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 118 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 234
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ +C ++ +P +E+ +E + + +++Q +E
Sbjct: 235 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 290
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 15/178 (8%)
Query: 9 KSKSVHESNVEQFINEVVILSQINHR-NVVKILGCCLETEVPLLV-YEFIPNGSLYQYIH 66
K + H S ++E+ IL I H NVV +LG C + PL+V EF G+L Y+
Sbjct: 66 KEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 124
Query: 67 EQTDDQLP--------ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY 118
+ ++ +P +T E + + +V++ + +L S I H D+ + NILL +K
Sbjct: 125 SKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXI---HRDLAARNILLSEKN 181
Query: 119 QAKISDFRTFKSRAIDRTHL-TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
KI DF + D ++ ++ ++ P+ +T +SDV+SF V+L E+
Sbjct: 182 VVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 239
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 113/236 (47%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L+ + +P G L Y+ E D+ I +
Sbjct: 65 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQ 120
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 121 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 178 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 237
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ +C ++ +P +E+ +E + + +++Q +E
Sbjct: 238 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 293
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 113/236 (47%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L+ + +P G L Y+ E D+ I +
Sbjct: 65 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQ 120
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 121 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 178 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 237
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ +C ++ +P +E+ +E + + +++Q +E
Sbjct: 238 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 293
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 113/236 (47%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L+ + +P G L Y+ E D+ I +
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQ 117
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 118 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 174
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 234
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ +C ++ +P +E+ +E + + +++Q +E
Sbjct: 235 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 290
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 113/236 (47%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L+ + +P G L Y+ E D+ I +
Sbjct: 87 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQ 142
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 143 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 199
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 200 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 259
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ +C ++ +P +E+ +E + + +++Q +E
Sbjct: 260 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 315
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 113/236 (47%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L+ + +P G L Y+ E D+ I +
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDN---IGSQ 117
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 118 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 234
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ +C ++ +P +E+ +E + + +++Q +E
Sbjct: 235 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 290
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++FI E ++ ++H +V++ G C + ++ E++ NG L Y+ E + +
Sbjct: 44 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQ 100
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
L + +V + YL S + H D+ + N L+ D+ K+SDF SR +
Sbjct: 101 QLLEMCKDVCEAMEYLESKQFL---HRDLAARNCLVNDQGVVKVSDFGL--SRYVLDDEY 155
Query: 139 TTQVKVTFG--YVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
T+ V F + P+ S+F+ KSD+++F V++ E+
Sbjct: 156 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 194
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 113/236 (47%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L+ + +P G L Y+ E D+ I +
Sbjct: 68 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQ 123
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 124 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 180
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 181 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 240
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ +C ++ +P +E+ +E + + +++Q +E
Sbjct: 241 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 296
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 41/199 (20%)
Query: 17 NVEQFINEVVILSQINHRNVVKILGC-------------CLE----------------TE 47
N E+ EV L++++H N+V GC LE T+
Sbjct: 48 NNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTK 107
Query: 48 VPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDI 107
+ EF G+L Q+I ++ ++L + L + ++++ + Y+HS I H D+
Sbjct: 108 CLFIQMEFCDKGTLEQWIEKRRGEKLDKV--LALELFEQITKGVDYIHSKKLI---HRDL 162
Query: 108 KSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYS 167
K +NI LVD Q KI DF S D T+ K T Y+ P+ S + ++ D+Y+
Sbjct: 163 KPSNIFLVDTKQVKIGDFGLVTSLKNDGKR--TRSKGTLRYMSPEQISSQDYGKEVDLYA 220
Query: 168 FSVVLVELNWTKPIHLVDV 186
++L EL +H+ D
Sbjct: 221 LGLILAEL-----LHVCDT 234
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 113/236 (47%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L+ + +P G L Y+ E D+ I +
Sbjct: 56 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQ 111
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 112 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 168
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 169 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 228
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ +C ++ +P +E+ +E + + +++Q +E
Sbjct: 229 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 284
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 113/236 (47%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L+ + +P G L Y+ E D+ I +
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQ 119
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 120 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 176
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 236
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ +C ++ +P +E+ +E + + +++Q +E
Sbjct: 237 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 292
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 6/157 (3%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++FI E ++ ++H +V++ G C + ++ E++ NG L Y+ E + +
Sbjct: 49 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQ 105
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
L + +V + YL S + H D+ + N L+ D+ K+SDF + D
Sbjct: 106 QLLEMCKDVCEAMEYLESKQFL---HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 162
Query: 139 TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ K + P+ S+F+ KSD+++F V++ E+
Sbjct: 163 SRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 199
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 19/218 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E INE++++ + + N+V L L + +V E++ GSL + E D+ I
Sbjct: 62 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV 121
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
R E + L +LHS I H DIKS NILL K++DF +++
Sbjct: 122 CR-----ECLQALEFLHSNQVI---HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173
Query: 139 TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYF-- 196
+T V + ++ P+ + K D++S ++ +E+ +P +L EN A Y
Sbjct: 174 STMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL---NENPLRALYLIA 229
Query: 197 ---SKEAEKEEVIT--FAMVAKRCLNLNGKKQPTMKEV 229
+ E + E ++ F RCL+++ +K+ + KE+
Sbjct: 230 TNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL 267
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVP--LLVYEFIPNGSLYQYIHEQTDD 71
H S +Q E+ IL + H +++K GCC + LV E++P GSL Y+ +
Sbjct: 76 HRSGWKQ---EIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS-- 130
Query: 72 QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSR 131
I L ++ ++YLH+ I H D+ + N+LL + KI DF ++
Sbjct: 131 ---IGLAQLLLFAQQICEGMAYLHAQHYI---HRDLAARNVLLDNDRLVKIGDFGL--AK 182
Query: 132 AIDRTHLTTQVK-----VTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
A+ H +V+ F Y P+ + +F SDV+SF V L EL
Sbjct: 183 AVPEGHEXYRVREDGDSPVFWYA-PECLKEYKFYYASDVWSFGVTLYEL 230
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 107/241 (44%), Gaps = 20/241 (8%)
Query: 15 ESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
E ++ I+E+ ++ I H+N++ +LG C + ++ E+ G+L +Y+ + L
Sbjct: 63 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 122
Query: 74 PITWEMR------------LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
++ + +V+R + YL S I H D+ + N+L+ + K
Sbjct: 123 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMK 179
Query: 122 ISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WT 178
I+DF + ID TT ++ ++ P+ +T +SDV+SF V+L E+
Sbjct: 180 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 239
Query: 179 KPIHLVDVEENRSLAAYFSKEAEKEEVIT-FAMVAKRCLNLNGKKQPTMKEVTLELAGIR 237
P V VEE L + + M+ + C + ++PT K++ +L I
Sbjct: 240 SPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 299
Query: 238 A 238
A
Sbjct: 300 A 300
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 107/241 (44%), Gaps = 20/241 (8%)
Query: 15 ESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
E ++ I+E+ ++ I H+N++ +LG C + ++ E+ G+L +Y+ + L
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 133
Query: 74 PITWEMR------------LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
++ + +V+R + YL S I H D+ + N+L+ + K
Sbjct: 134 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMK 190
Query: 122 ISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WT 178
I+DF + ID TT ++ ++ P+ +T +SDV+SF V+L E+
Sbjct: 191 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
Query: 179 KPIHLVDVEENRSLAAYFSKEAEKEEVIT-FAMVAKRCLNLNGKKQPTMKEVTLELAGIR 237
P V VEE L + + M+ + C + ++PT K++ +L I
Sbjct: 251 SPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
Query: 238 A 238
A
Sbjct: 311 A 311
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 113/236 (47%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L+ + +P G L Y+ E D+ I +
Sbjct: 96 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQ 151
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V++++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 152 YLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 208
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 209 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 268
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ +C ++ +P +E+ +E + + +++Q +E
Sbjct: 269 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 324
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 107/241 (44%), Gaps = 20/241 (8%)
Query: 15 ESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
E ++ I+E+ ++ I H+N++ +LG C + ++ E+ G+L +Y+ + L
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGL 133
Query: 74 PITWEMR------------LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
++ + +V+R + YL S I H D+ + N+L+ + K
Sbjct: 134 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMK 190
Query: 122 ISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WT 178
I+DF + ID TT ++ ++ P+ +T +SDV+SF V+L E+
Sbjct: 191 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
Query: 179 KPIHLVDVEENRSLAAYFSKEAEKEEVIT-FAMVAKRCLNLNGKKQPTMKEVTLELAGIR 237
P V VEE L + + M+ + C + ++PT K++ +L I
Sbjct: 251 SPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
Query: 238 A 238
A
Sbjct: 311 A 311
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 15/178 (8%)
Query: 9 KSKSVHESNVEQFINEVVILSQINHR-NVVKILGCCLETEVPLLV-YEFIPNGSLYQYIH 66
K + H S ++E+ IL I H NVV +LG C + PL+V EF G+L Y+
Sbjct: 66 KEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 124
Query: 67 EQTDDQLP--------ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY 118
+ ++ +P +T E + + +V++ + +L S I H D+ + NILL +K
Sbjct: 125 SKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXI---HRDLAARNILLSEKN 181
Query: 119 QAKISDFRTFKSRAIDRTHL-TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
KI DF + D ++ ++ ++ P+ +T +SDV+SF V+L E+
Sbjct: 182 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 239
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 107/241 (44%), Gaps = 20/241 (8%)
Query: 15 ESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
E ++ I+E+ ++ I H+N++ +LG C + ++ E+ G+L +Y+ + L
Sbjct: 66 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 125
Query: 74 PITWEMR------------LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
++ + +V+R + YL S I H D+ + N+L+ + K
Sbjct: 126 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMK 182
Query: 122 ISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WT 178
I+DF + ID TT ++ ++ P+ +T +SDV+SF V+L E+
Sbjct: 183 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 242
Query: 179 KPIHLVDVEENRSLAAYFSKEAEKEEVIT-FAMVAKRCLNLNGKKQPTMKEVTLELAGIR 237
P V VEE L + + M+ + C + ++PT K++ +L I
Sbjct: 243 SPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 302
Query: 238 A 238
A
Sbjct: 303 A 303
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 107/241 (44%), Gaps = 20/241 (8%)
Query: 15 ESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
E ++ I+E+ ++ I H+N++ +LG C + ++ E+ G+L +Y+ + L
Sbjct: 67 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 126
Query: 74 PITWEMR------------LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
++ + +V+R + YL S I H D+ + N+L+ + K
Sbjct: 127 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMK 183
Query: 122 ISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WT 178
I+DF + ID TT ++ ++ P+ +T +SDV+SF V+L E+
Sbjct: 184 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 243
Query: 179 KPIHLVDVEENRSLAAYFSKEAEKEEVIT-FAMVAKRCLNLNGKKQPTMKEVTLELAGIR 237
P V VEE L + + M+ + C + ++PT K++ +L I
Sbjct: 244 SPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 303
Query: 238 A 238
A
Sbjct: 304 A 304
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 87/186 (46%), Gaps = 28/186 (15%)
Query: 17 NVEQFINEVVILSQINHRNVVKILGCC----------------LETEVPLLVYEFIPNGS 60
N E+ EV L++++H N+V GC +T+ + EF G+
Sbjct: 47 NNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGT 106
Query: 61 LYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA 120
L Q+I ++ ++L + L + ++++ + Y+HS I + D+K +NI LVD Q
Sbjct: 107 LEQWIEKRRGEKLDKV--LALELFEQITKGVDYIHSKKLI---NRDLKPSNIFLVDTKQV 161
Query: 121 KISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
KI DF S D + K T Y+ P+ S + ++ D+Y+ ++L EL
Sbjct: 162 KIGDFGLVTSLKNDGKRXRS--KGTLRYMSPEQISSQDYGKEVDLYALGLILAEL----- 214
Query: 181 IHLVDV 186
+H+ D
Sbjct: 215 LHVCDT 220
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 81/165 (49%), Gaps = 12/165 (7%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E F+ E I+ Q +H N++++ G +++ ++V E + NGSL ++ + D Q
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFT 145
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI- 133
+ +++ + + S + ++ + H D+ + NIL+ K+SDF SR +
Sbjct: 146 V-----IQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGL--SRVLE 198
Query: 134 ---DRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ + T K+ + P+ +FT SDV+S+ +VL E+
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 17/175 (9%)
Query: 15 ESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
E ++ ++E+ ++ I H+N++ +LG C + ++ E+ G+L +Y+ + +
Sbjct: 70 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 129
Query: 74 PITWEMR------------LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
++++ + T +++R + YL S I H D+ + N+L+ + K
Sbjct: 130 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMK 186
Query: 122 ISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
I+DF + ID TT ++ ++ P+ +T +SDV+SF V++ E+
Sbjct: 187 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 241
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 17/175 (9%)
Query: 15 ESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
E ++ ++E+ ++ I H+N++ +LG C + ++ E+ G+L +Y+ + +
Sbjct: 73 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 132
Query: 74 PITWEMR------------LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
++++ + T +++R + YL S I H D+ + N+L+ + K
Sbjct: 133 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMK 189
Query: 122 ISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
I+DF + ID TT ++ ++ P+ +T +SDV+SF V++ E+
Sbjct: 190 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 244
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 17/175 (9%)
Query: 15 ESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
E ++ ++E+ ++ I H+N++ +LG C + ++ E+ G+L +Y+ + +
Sbjct: 81 EEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 74 PITWEMR------------LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
++++ + T +++R + YL S I H D+ + N+L+ + K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMK 197
Query: 122 ISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
I+DF + ID TT ++ ++ P+ +T +SDV+SF V++ E+
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 107/241 (44%), Gaps = 20/241 (8%)
Query: 15 ESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
E ++ I+E+ ++ I H+N++ +LG C + ++ E+ G+L +Y+ + L
Sbjct: 115 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 174
Query: 74 PITWEMR------------LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
++ + +V+R + YL S I H D+ + N+L+ + K
Sbjct: 175 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMK 231
Query: 122 ISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WT 178
I+DF + ID TT ++ ++ P+ +T +SDV+SF V+L E+
Sbjct: 232 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 291
Query: 179 KPIHLVDVEENRSLAAYFSKEAEKEEVIT-FAMVAKRCLNLNGKKQPTMKEVTLELAGIR 237
P V VEE L + + M+ + C + ++PT K++ +L I
Sbjct: 292 SPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351
Query: 238 A 238
A
Sbjct: 352 A 352
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 16/161 (9%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQ---TDDQLPI 75
++ + E ++ Q+++ +V+++G C E E +LV E G L +Y+ + D +
Sbjct: 51 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-- 107
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDR 135
+ + +VS + YL + H D+ + N+LLV ++ AKISDF K+ D
Sbjct: 108 -----IELVHQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADE 159
Query: 136 THLTTQV--KVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE 174
+ Q K + P+ +F+ KSDV+SF V++ E
Sbjct: 160 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 200
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 17/175 (9%)
Query: 15 ESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
E ++ ++E+ ++ I H+N++ +LG C + ++ E+ G+L +Y+ + +
Sbjct: 68 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 127
Query: 74 PITWEMR------------LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
++++ + T +++R + YL S I H D+ + N+L+ + K
Sbjct: 128 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLTARNVLVTENNVMK 184
Query: 122 ISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
I+DF + ID TT ++ ++ P+ +T +SDV+SF V++ E+
Sbjct: 185 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 239
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 16/161 (9%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQ---TDDQLPI 75
++ + E ++ Q+++ +V+++G C E E +LV E G L +Y+ + D +
Sbjct: 63 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-- 119
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDR 135
+ + +VS + YL + H D+ + N+LLV ++ AKISDF K+ D
Sbjct: 120 -----IELVHQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADE 171
Query: 136 THLTTQV--KVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE 174
+ Q K + P+ +F+ KSDV+SF V++ E
Sbjct: 172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 212
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 81/165 (49%), Gaps = 12/165 (7%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E F+ E I+ Q +H N++++ G +++ ++V E + NGSL ++ + D Q
Sbjct: 58 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFT 116
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI- 133
+ +++ + + S + ++ + H D+ + NIL+ K+SDF SR +
Sbjct: 117 V-----IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL--SRVLE 169
Query: 134 ---DRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ + T K+ + P+ +FT SDV+S+ +VL E+
Sbjct: 170 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 214
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 16/161 (9%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQ---TDDQLPI 75
++ + E ++ Q+++ +V+++G C E E +LV E G L +Y+ + D +
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-- 113
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDR 135
+ + +VS + YL + H D+ + N+LLV ++ AKISDF K+ D
Sbjct: 114 -----IELVHQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADE 165
Query: 136 THLTTQV--KVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE 174
+ Q K + P+ +F+ KSDV+SF V++ E
Sbjct: 166 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 104/233 (44%), Gaps = 25/233 (10%)
Query: 12 SVHESNVEQFINEVVILSQINHRNVVKILGCCLE-TEVPL-LVYEFIPNGSLYQYIHEQT 69
S+ E+ + ++EV +L ++ H N+V+ ++ T L +V E+ G L I + T
Sbjct: 43 SMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGT 102
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLH--SVASIPIYHLDIKSANILLVDKYQAKISDFRT 127
++ + E LR+ +++ L H S + H D+K AN+ L K K+ DF
Sbjct: 103 KERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 162
Query: 128 FKSRAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLV 184
+R ++ H T+ K G Y+ P+ + EKSD++S +L EL P
Sbjct: 163 --ARILN--HDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA 218
Query: 185 --------DVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
+ E + + E E+IT R LNL +P+++E+
Sbjct: 219 FSQKELAGKIREGKFRRIPYRYSDELNEIIT------RMLNLKDYHRPSVEEI 265
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 16/161 (9%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQ---TDDQLPI 75
++ + E ++ Q+++ +V+++G C E E +LV E G L +Y+ + D +
Sbjct: 53 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-- 109
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDR 135
+ + +VS + YL + H D+ + N+LLV ++ AKISDF K+ D
Sbjct: 110 -----IELVHQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADE 161
Query: 136 THLTTQV--KVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE 174
+ Q K + P+ +F+ KSDV+SF V++ E
Sbjct: 162 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 202
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 20/241 (8%)
Query: 15 ESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
E ++ I+E+ ++ I H+N++ +LG C + ++ E+ G+L +Y+ + L
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 133
Query: 74 PITWEMR------------LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
+ + +V+R + YL S I H D+ + N+L+ + K
Sbjct: 134 EYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMK 190
Query: 122 ISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WT 178
I+DF + ID TT ++ ++ P+ +T +SDV+SF V+L E+
Sbjct: 191 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
Query: 179 KPIHLVDVEENRSLAAYFSKEAEKEEVIT-FAMVAKRCLNLNGKKQPTMKEVTLELAGIR 237
P V VEE L + + M+ + C + ++PT K++ +L I
Sbjct: 251 SPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
Query: 238 A 238
A
Sbjct: 311 A 311
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH------EQTDDQL 73
+F+NE ++ + N +VV++LG + + L++ E + G L Y+ E
Sbjct: 59 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 118
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RA 132
P + +++ E++ ++YL++ + H D+ + N ++ + + KI DF +
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIXE 175
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D + + ++ P+ + FT SDV+SF VVL E+
Sbjct: 176 TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 17/175 (9%)
Query: 15 ESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
E ++ ++E+ ++ I H+N++ +LG C + ++ E+ G+L +Y+ + +
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 74 PITWEMR------------LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
++++ + T +++R + YL S I H D+ + N+L+ + K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMK 197
Query: 122 ISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
I+DF + ID TT ++ ++ P+ +T +SDV+SF V++ E+
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 17/175 (9%)
Query: 15 ESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
E ++ ++E+ ++ I H+N++ +LG C + ++ E+ G+L +Y+ + +
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 74 PITWEMR------------LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
++++ + T +++R + YL S I H D+ + N+L+ + K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMK 197
Query: 122 ISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
I+DF + ID TT ++ ++ P+ +T +SDV+SF V++ E+
Sbjct: 198 IADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 90/170 (52%), Gaps = 14/170 (8%)
Query: 11 KSVHESNV--EQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHE 67
KS+ + ++ + F+ E ++ Q+ H+ +V++ T+ P+ ++ E++ NGSL ++
Sbjct: 39 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFL-- 94
Query: 68 QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRT 127
+T + +T L + +++ ++++ I H ++++ANIL+ D KI+DF
Sbjct: 95 KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRNLRAANILVSDTLSCKIADFGL 151
Query: 128 FKSRAIDRTHLTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R I+ T + K + P+ FT KSDV+SF ++L E+
Sbjct: 152 --ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 199
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 16/161 (9%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQ---TDDQLPI 75
++ + E ++ Q+++ +V+++G C E E +LV E G L +Y+ + D +
Sbjct: 71 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-- 127
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDR 135
+ + +VS + YL + H D+ + N+LLV ++ AKISDF K+ D
Sbjct: 128 -----IELVHQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADE 179
Query: 136 THLTTQV--KVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE 174
+ Q K + P+ +F+ KSDV+SF V++ E
Sbjct: 180 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 220
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 17/175 (9%)
Query: 15 ESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
E ++ ++E+ ++ I H+N++ +LG C + ++ E+ G+L +Y+ + +
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 74 PITWEMR------------LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
++++ + T +++R + YL S I H D+ + N+L+ + K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMK 197
Query: 122 ISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
I+DF + ID TT ++ ++ P+ +T +SDV+SF V++ E+
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 20/241 (8%)
Query: 15 ESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
E ++ I+E+ ++ I H+N++ +LG C + ++ E+ G+L +Y+ + L
Sbjct: 59 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 118
Query: 74 PITWEMR------------LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
+ + +V+R + YL S I H D+ + N+L+ + K
Sbjct: 119 EYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMK 175
Query: 122 ISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WT 178
I+DF + ID TT ++ ++ P+ +T +SDV+SF V+L E+
Sbjct: 176 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 235
Query: 179 KPIHLVDVEENRSLAAYFSKEAEKEEVIT-FAMVAKRCLNLNGKKQPTMKEVTLELAGIR 237
P V VEE L + + M+ + C + ++PT K++ +L I
Sbjct: 236 SPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 295
Query: 238 A 238
A
Sbjct: 296 A 296
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 16/161 (9%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQ---TDDQLPI 75
++ + E ++ Q+++ +V+++G C E E +LV E G L +Y+ + D +
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-- 129
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDR 135
+ + +VS + YL + H D+ + N+LLV ++ AKISDF K+ D
Sbjct: 130 -----IELVHQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADE 181
Query: 136 THLTTQV--KVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE 174
+ Q K + P+ +F+ KSDV+SF V++ E
Sbjct: 182 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 16/161 (9%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQ---TDDQLPI 75
++ + E ++ Q+++ +V+++G C E E +LV E G L +Y+ + D +
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-- 129
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDR 135
+ + +VS + YL + H D+ + N+LLV ++ AKISDF K+ D
Sbjct: 130 -----IELVHQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADE 181
Query: 136 THLTTQV--KVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE 174
+ Q K + P+ +F+ KSDV+SF V++ E
Sbjct: 182 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 112/236 (47%), Gaps = 11/236 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ ++E +++ +++ +V ++LG CL + V L+ + +P G L Y+ E D+ I +
Sbjct: 59 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQ 114
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRTH 137
L V+++ ++YL + H D+ + N+L+ KI+DF K A ++ +
Sbjct: 115 YLLNWCVQIAEGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 171
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAY 195
KV ++ + +T +SDV+S+ V + EL +KP + E S+
Sbjct: 172 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 231
Query: 196 FSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEE 250
+ + I M+ +C ++ +P +E+ +E + + +++Q +E
Sbjct: 232 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 287
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH------EQTDDQL 73
+F+NE ++ + N +VV++LG + + L++ E + G L Y+ E
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RA 132
P + +++ E++ ++YL++ + H D+ + N ++ + + KI DF +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIXE 184
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D + + ++ P+ + FT SDV+SF VVL E+
Sbjct: 185 TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 8/163 (4%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E F+ E I+ Q +H N++++ G +++ ++V E + NGSL ++ + D Q
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFT 145
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAID 134
+ +++ + + S + ++ + H D+ + NIL+ K+SDF + D
Sbjct: 146 V-----IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 135 --RTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ T K+ + P+ +FT SDV+S+ +VL E+
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 7/166 (4%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E +++F EV SQ++H+N+V ++ E + LV E+I +L +YI P
Sbjct: 52 EETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG----P 107
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAID 134
++ + + T ++ + + H + I H DIK NIL+ KI DF K+ +
Sbjct: 108 LSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164
Query: 135 RTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
T V T Y P+ + E +D+YS +VL E+ +P
Sbjct: 165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEP 210
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 17/175 (9%)
Query: 15 ESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
E ++ ++E+ ++ I H+N++ +LG C + ++ E+ G+L +Y+ + +
Sbjct: 127 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 186
Query: 74 PITWEMR------------LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
++++ + T +++R + YL S I H D+ + N+L+ + K
Sbjct: 187 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMK 243
Query: 122 ISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
I+DF + ID TT ++ ++ P+ +T +SDV+SF V++ E+
Sbjct: 244 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 9 KSKSVHESNVEQFINEVVILSQINHR-NVVKILGCCLETEVPLLV-YEFIPNGSLYQYIH 66
K + H S ++E+ IL I H NVV +LG C + PL+V EF G+L Y+
Sbjct: 68 KEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 126
Query: 67 EQTDDQLP----------ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD 116
+ ++ +P +T E + + +V++ + +L S I H D+ + NILL +
Sbjct: 127 SKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXI---HRDLAARNILLSE 183
Query: 117 KYQAKISDFRTFKSRAIDRTHL-TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K KI DF + D + ++ ++ P+ +T +SDV+SF V+L E+
Sbjct: 184 KNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 76/156 (48%), Gaps = 7/156 (4%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM 79
+F+ E IL Q +H N+V+++G C + + +V E + G ++ + + +
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR---LRVKT 214
Query: 80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLT 139
L++ + + + YL S I H D+ + N L+ +K KISDF + A +
Sbjct: 215 LLQMVGDAAAGMEYLESKCCI---HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAAS 271
Query: 140 TQVK-VTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE 174
++ V + P+ +++ +SDV+SF ++L E
Sbjct: 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 81/165 (49%), Gaps = 10/165 (6%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E F++E I+ Q +H NV+ + G ++ +++ EF+ NGSL ++ Q D Q
Sbjct: 49 EKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR-QNDGQFT 107
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSR 131
+ +++ + + + + +A + H + + NIL+ K+SDF R +
Sbjct: 108 V-----IQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDD 162
Query: 132 AIDRTHLTT-QVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D T+ + K+ + P+ + +FT SDV+S+ +V+ E+
Sbjct: 163 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEV 207
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G +Y+ + + + D+Q T+
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY 118
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + RT
Sbjct: 119 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 169
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 170 TLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 209
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 86/175 (49%), Gaps = 17/175 (9%)
Query: 15 ESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
E ++ ++E+ ++ I H+N++ +LG C + ++ E+ G+L +Y+ + +
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 74 PITWEMR------------LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
++++ + T +++R + YL S I H D+ + N+L+ + +
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMR 197
Query: 122 ISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
I+DF + ID TT ++ ++ P+ +T +SDV+SF V++ E+
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 81/165 (49%), Gaps = 12/165 (7%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E F+ E I+ Q +H N++ + G +++ ++V E++ NGSL ++ ++ D Q
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL-KKNDGQFT 122
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI- 133
+ + + +S + YL + + H D+ + NIL+ K+SDF SR +
Sbjct: 123 VI--QLVGMLRGISAGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGL--SRVLE 175
Query: 134 ---DRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ + T K+ + P+ +FT SDV+S+ +V+ E+
Sbjct: 176 DDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEV 220
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 12/161 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E F+ E ++ ++ H +V++ E + +V E++ GSL ++ +T L
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYL----- 108
Query: 79 MRLRITVEVS-RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
RL V++S ++ S + V + H D+++ANIL+ + K++DF +R I+
Sbjct: 109 -RLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL--ARLIEDNE 165
Query: 138 LTTQVKVTFG--YVDPKYFRSSQFTEKSDVYSFSVVLVELN 176
T + F + P+ +FT KSDV+SF ++L EL
Sbjct: 166 WTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 206
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 10/158 (6%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ + E ++ Q+++ +V+++G C E E +LV E G L +Y+ + + +
Sbjct: 415 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH----VKDK 469
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
+ + +VS + YL + H D+ + N+LLV ++ AKISDF K+ D +
Sbjct: 470 NIIELVHQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526
Query: 139 TTQV--KVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE 174
Q K + P+ +F+ KSDV+SF V++ E
Sbjct: 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 564
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 10/158 (6%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
++ + E ++ Q+++ +V+++G C E E +LV E G L +Y+ + + +
Sbjct: 416 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH----VKDK 470
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
+ + +VS + YL + H D+ + N+LLV ++ AKISDF K+ D +
Sbjct: 471 NIIELVHQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 527
Query: 139 TTQV--KVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE 174
Q K + P+ +F+ KSDV+SF V++ E
Sbjct: 528 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 565
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 85/176 (48%), Gaps = 15/176 (8%)
Query: 12 SVHESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--- 67
+ H E ++E+ I+S + H N+V +LG C L++ E+ G L ++
Sbjct: 87 TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSR 146
Query: 68 --QTDDQLPI---TWEMR--LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA 120
+TD I T R L + +V++ +++L S I H D+ + N+LL + + A
Sbjct: 147 VLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVA 203
Query: 121 KISDFRTFKSRAIDRTHLT-TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
KI DF + D ++ ++ ++ P+ +T +SDV+S+ ++L E+
Sbjct: 204 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 16/161 (9%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQ---TDDQLPI 75
++ + E ++ Q+++ +V+++G C E E +LV E G L +Y+ + D +
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-- 113
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDR 135
+ + +VS + YL + H D+ + N+LLV ++ AKISDF K+ D
Sbjct: 114 -----IELVHQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADE 165
Query: 136 THLTTQV--KVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE 174
Q K + P+ +F+ KSDV+SF V++ E
Sbjct: 166 NXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 9 KSKSVHESNVEQFINEVVILSQINHR-NVVKILGCCLETEVPLLV-YEFIPNGSLYQYIH 66
K + H S ++E+ IL I H NVV +LG C + PL+V EF G+L Y+
Sbjct: 68 KEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 126
Query: 67 EQTDDQLP------------ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL 114
+ ++ +P +T E + + +V++ + +L S I H D+ + NILL
Sbjct: 127 SKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILL 183
Query: 115 VDKYQAKISDFRTFKSRAIDRTHL-TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLV 173
+K KI DF + D ++ ++ ++ P+ +T +SDV+SF V+L
Sbjct: 184 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 243
Query: 174 EL 175
E+
Sbjct: 244 EI 245
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 76/156 (48%), Gaps = 7/156 (4%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM 79
+F+ E IL Q +H N+V+++G C + + +V E + G ++ + + +
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR---LRVKT 214
Query: 80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLT 139
L++ + + + YL S I H D+ + N L+ +K KISDF + A +
Sbjct: 215 LLQMVGDAAAGMEYLESKCCI---HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS 271
Query: 140 TQVK-VTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE 174
++ V + P+ +++ +SDV+SF ++L E
Sbjct: 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 12/161 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E F+ E ++ ++ H +V++ E + +V E++ GSL ++ +T L
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYL----- 108
Query: 79 MRLRITVEVS-RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
RL V++S ++ S + V + H D+++ANIL+ + K++DF +R I+
Sbjct: 109 -RLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL--ARLIEDNE 165
Query: 138 LTTQVKVTFG--YVDPKYFRSSQFTEKSDVYSFSVVLVELN 176
T + F + P+ +FT KSDV+SF ++L EL
Sbjct: 166 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 206
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 81/161 (50%), Gaps = 12/161 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E F+ E ++ ++ H +V++ E + +V E++ GSL ++ +T L
Sbjct: 48 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-XIVTEYMSKGSLLDFLKGETGKYL----- 101
Query: 79 MRLRITVEVS-RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
RL V+++ ++ S + V + H D+++ANIL+ + K++DF +R I+
Sbjct: 102 -RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL--ARLIEDNE 158
Query: 138 LTTQVKVTFG--YVDPKYFRSSQFTEKSDVYSFSVVLVELN 176
T + F + P+ +FT KSDV+SF ++L EL
Sbjct: 159 XTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 199
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 81/165 (49%), Gaps = 10/165 (6%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E +F++E I+ Q H N++++ G + +++ EF+ NG+L ++ D Q
Sbjct: 56 ERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR-LNDGQFT 114
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSR 131
+ +++ + + S + +A + H D+ + NIL+ K+SDF R +
Sbjct: 115 V-----IQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEEN 169
Query: 132 AIDRTHLTT-QVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ D T+ ++ K+ + P+ +FT SD +S+ +V+ E+
Sbjct: 170 SSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEV 214
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 85/176 (48%), Gaps = 15/176 (8%)
Query: 12 SVHESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--- 67
+ H E ++E+ I+S + H N+V +LG C L++ E+ G L ++
Sbjct: 87 TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSR 146
Query: 68 --QTDDQLPI---TWEMR--LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA 120
+TD I T R L + +V++ +++L S I H D+ + N+LL + + A
Sbjct: 147 VLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVA 203
Query: 121 KISDFRTFKSRAIDRTHLT-TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
KI DF + D ++ ++ ++ P+ +T +SDV+S+ ++L E+
Sbjct: 204 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + RT
Sbjct: 114 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 164
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 165 DLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + RT
Sbjct: 114 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 164
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 165 ELCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 13/210 (6%)
Query: 23 NEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLR 82
E+ +LSQ + + + G L++ ++ E++ GS + ++ I +R
Sbjct: 66 QEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR-- 123
Query: 83 ITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQV 142
E+ + L YLHS I H DIK+AN+LL ++ K++DF + V
Sbjct: 124 ---EILKGLDYLHSERKI---HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV 177
Query: 143 KVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSL---AAYFSKE 199
F ++ P+ + S + K+D++S + +EL +P + D+ R L
Sbjct: 178 GTPF-WMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPN-SDLHPMRVLFLIPKNSPPT 235
Query: 200 AEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
E + F + CLN + + +PT KE+
Sbjct: 236 LEGQHSKPFKEFVEACLNKDPRFRPTAKEL 265
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 9 KSKSVHESNVEQFINEVVILSQINHR-NVVKILGCCLETEVPLLV-YEFIPNGSLYQYIH 66
K + H S ++E+ IL I H NVV +LG C + PL+V EF G+L Y+
Sbjct: 103 KEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 161
Query: 67 EQTDDQLP------------ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL 114
+ ++ +P +T E + + +V++ + +L S I H D+ + NILL
Sbjct: 162 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILL 218
Query: 115 VDKYQAKISDFRTFKSRAIDRTHL-TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLV 173
+K KI DF + D ++ ++ ++ P+ +T +SDV+SF V+L
Sbjct: 219 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 278
Query: 174 EL 175
E+
Sbjct: 279 EI 280
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 9 KSKSVHESNVEQFINEVVILSQINHR-NVVKILGCCLETEVPLLV-YEFIPNGSLYQYIH 66
K + H S ++E+ IL I H NVV +LG C + PL+V EF G+L Y+
Sbjct: 66 KEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 124
Query: 67 EQTDDQLP------------ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL 114
+ ++ +P +T E + + +V++ + +L S I H D+ + NILL
Sbjct: 125 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILL 181
Query: 115 VDKYQAKISDFRTFKSRAIDRTHL-TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLV 173
+K KI DF + D ++ ++ ++ P+ +T +SDV+SF V+L
Sbjct: 182 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 241
Query: 174 EL 175
E+
Sbjct: 242 EI 243
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 18/181 (9%)
Query: 9 KSKSVHESNVEQFINEVVILSQINHR-NVVKILGCCLETEVPLLV-YEFIPNGSLYQYIH 66
K + H S ++E+ IL I H NVV +LG C + PL+V EF G+L Y+
Sbjct: 67 KEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 125
Query: 67 EQTDDQLP-----------ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLV 115
+ ++ +P +T E + + +V++ + +L S I H D+ + NILL
Sbjct: 126 SKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLS 182
Query: 116 DKYQAKISDFRTFKSRAIDRTHL-TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE 174
+K KI DF + D + ++ ++ P+ +T +SDV+SF V+L E
Sbjct: 183 EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 175 L 175
+
Sbjct: 243 I 243
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 84/185 (45%), Gaps = 24/185 (12%)
Query: 12 SVHESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQT- 69
+ H E ++E+ I+S + H N+V +LG C L++ E+ G L ++ +
Sbjct: 72 TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAE 131
Query: 70 ------------------DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSAN 111
+D P+ L + +V++ +++L S I H D+ + N
Sbjct: 132 AMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCI---HRDVAARN 188
Query: 112 ILLVDKYQAKISDFRTFKSRAIDRTHLT-TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSV 170
+LL + + AKI DF + D ++ ++ ++ P+ +T +SDV+S+ +
Sbjct: 189 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 248
Query: 171 VLVEL 175
+L E+
Sbjct: 249 LLWEI 253
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 81/161 (50%), Gaps = 12/161 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E F+ E ++ ++ H +V++ E + +V E++ GSL ++ +T L
Sbjct: 51 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYL----- 104
Query: 79 MRLRITVEVS-RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
RL V+++ ++ S + V + H D+++ANIL+ + K++DF +R I+
Sbjct: 105 -RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL--ARLIEDNE 161
Query: 138 LTTQVKVTFG--YVDPKYFRSSQFTEKSDVYSFSVVLVELN 176
T + F + P+ +FT KSDV+SF ++L EL
Sbjct: 162 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 202
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 30/193 (15%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+LK++ S S + ++E +L Q+NH +V+K+ G C + LL+ E+ GSL ++
Sbjct: 60 MLKENAS--PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
Query: 66 HEQTD--------------------DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHL 105
E D+ +T + ++S+ + YL A + + H
Sbjct: 118 RESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHR 174
Query: 106 DIKSANILLVDKYQAKISDFRTFKSRAI---DRTHLTTQVKVTFGYVDPKYFRSSQFTEK 162
D+ + NIL+ + + KISDF SR + D +Q ++ ++ + +T +
Sbjct: 175 DLAARNILVAEGRKMKISDFGL--SRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 163 SDVYSFSVVLVEL 175
SDV+SF V+L E+
Sbjct: 233 SDVWSFGVLLWEI 245
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 9 KSKSVHESNVEQFINEVVILSQINHR-NVVKILGCCLETEVPLLVY-EFIPNGSLYQYIH 66
K + H S ++E+ IL I H NVV +LG C + PL+V EF G+L Y+
Sbjct: 57 KEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLR 115
Query: 67 EQTDDQLP------------ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL 114
+ ++ +P +T E + + +V++ + +L S I H D+ + NILL
Sbjct: 116 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILL 172
Query: 115 VDKYQAKISDFRTFKSRAIDRTHL-TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLV 173
+K KI DF + D ++ ++ ++ P+ +T +SDV+SF V+L
Sbjct: 173 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 232
Query: 174 EL 175
E+
Sbjct: 233 EI 234
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 9 KSKSVHESNVEQFINEVVILSQINHR-NVVKILGCCLETEVPLLVY-EFIPNGSLYQYIH 66
K + H S ++E+ IL I H NVV +LG C + PL+V EF G+L Y+
Sbjct: 57 KEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLR 115
Query: 67 EQTDDQLP------------ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL 114
+ ++ +P +T E + + +V++ + +L S I H D+ + NILL
Sbjct: 116 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILL 172
Query: 115 VDKYQAKISDFRTFKSRAIDRTHL-TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLV 173
+K KI DF + D ++ ++ ++ P+ +T +SDV+SF V+L
Sbjct: 173 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 232
Query: 174 EL 175
E+
Sbjct: 233 EI 234
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 114
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + RT
Sbjct: 115 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSCHAPSSRRT 165
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L+ T Y+ P+ EK D++S V+ E KP
Sbjct: 166 TLSG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 205
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 110/241 (45%), Gaps = 17/241 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE---QTDDQLPI 75
++ ++E +++ + V ++LG CL + V LV + +P G L ++ E + Q +
Sbjct: 64 KEILDEAYVMAGVGSPYVSRLLGICLTSTV-QLVTQLMPYGCLLDHVRENRGRLGSQDLL 122
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDR 135
W M ++++ +SYL V + H D+ + N+L+ KI+DF + ID
Sbjct: 123 NWCM------QIAKGMSYLEDVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE 173
Query: 136 T-HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSL 192
T + KV ++ + +FT +SDV+S+ V + EL KP + E L
Sbjct: 174 TEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDL 233
Query: 193 AAYFSKEAEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVLLQCEEI 251
+ + I M+ +C ++ + +P +E+ E + + V++Q E++
Sbjct: 234 LEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRMARDPQRFVVIQNEDL 293
Query: 252 N 252
Sbjct: 294 G 294
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 114
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + RT
Sbjct: 115 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 165
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 166 DLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 205
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 118
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + RT
Sbjct: 119 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 169
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 170 DLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 209
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 71 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 130
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + RT
Sbjct: 131 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 181
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 182 TLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 221
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 30/193 (15%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+LK++ S S + ++E +L Q+NH +V+K+ G C + LL+ E+ GSL ++
Sbjct: 60 MLKENAS--PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
Query: 66 HEQTD--------------------DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHL 105
E D+ +T + ++S+ + YL A + + H
Sbjct: 118 RESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHR 174
Query: 106 DIKSANILLVDKYQAKISDFRTFKSRAI---DRTHLTTQVKVTFGYVDPKYFRSSQFTEK 162
D+ + NIL+ + + KISDF SR + D +Q ++ ++ + +T +
Sbjct: 175 DLAARNILVAEGRKMKISDFGL--SRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 163 SDVYSFSVVLVEL 175
SDV+SF V+L E+
Sbjct: 233 SDVWSFGVLLWEI 245
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 19/230 (8%)
Query: 12 SVHESNVEQFINEVVILSQINHRNVVKILGCCLE-TEVPL-LVYEFIPNGSLYQYIHEQT 69
S+ E+ + ++EV +L ++ H N+V+ ++ T L +V E+ G L I + T
Sbjct: 43 SMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGT 102
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLH--SVASIPIYHLDIKSANILLVDKYQAKISDFRT 127
++ + E LR+ +++ L H S + H D+K AN+ L K K+ DF
Sbjct: 103 KERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 162
Query: 128 FKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLV--- 184
+ D V + Y+ P+ + EKSD++S +L EL P
Sbjct: 163 ARILNHDEDFAKEFVGTPY-YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ 221
Query: 185 -----DVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
+ E + + E E+IT R LNL +P+++E+
Sbjct: 222 KELAGKIREGKFRRIPYRYSDELNEIIT------RMLNLKDYHRPSVEEI 265
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 19/182 (10%)
Query: 9 KSKSVHESNVEQFINEVVILSQINHR-NVVKILGCCLETEVPLLV-YEFIPNGSLYQYIH 66
K + H S ++E+ IL I H NVV +LG C + PL+V EF G+L Y+
Sbjct: 66 KEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 124
Query: 67 EQTDDQLP------------ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL 114
+ ++ +P +T E + + +V++ + +L S I H D+ + NILL
Sbjct: 125 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILL 181
Query: 115 VDKYQAKISDFRTFKSRAIDRTHL-TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLV 173
+K KI DF + D + ++ ++ P+ +T +SDV+SF V+L
Sbjct: 182 SEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 241
Query: 174 EL 175
E+
Sbjct: 242 EI 243
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + RT
Sbjct: 114 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 164
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 165 DLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + RT
Sbjct: 114 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 164
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 165 XLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 92/191 (48%), Gaps = 26/191 (13%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+LK++ S S + ++E +L Q+NH +V+K+ G C + LL+ E+ GSL ++
Sbjct: 60 MLKENAS--PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
Query: 66 HEQTD--------------------DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHL 105
E D+ +T + ++S+ + YL A + + H
Sbjct: 118 RESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHR 174
Query: 106 DIKSANILLVDKYQAKISDFRTFKSRAIDRTHLT-TQVKVTFGYVDPKYFRSSQFTEKSD 164
D+ + NIL+ + + KISDF + + +++ +Q ++ ++ + +T +SD
Sbjct: 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 165 VYSFSVVLVEL 175
V+SF V+L E+
Sbjct: 235 VWSFGVLLWEI 245
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 19/182 (10%)
Query: 9 KSKSVHESNVEQFINEVVILSQINHR-NVVKILGCCLETEVPLLV-YEFIPNGSLYQYIH 66
K + H S ++E+ IL I H NVV +LG C + PL+V EF G+L Y+
Sbjct: 57 KEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 115
Query: 67 EQTDDQLP------------ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL 114
+ ++ +P +T E + + +V++ + +L S I H D+ + NILL
Sbjct: 116 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILL 172
Query: 115 VDKYQAKISDFRTFKSRAIDRTHL-TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLV 173
+K KI DF + D + ++ ++ P+ +T +SDV+SF V+L
Sbjct: 173 SEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 232
Query: 174 EL 175
E+
Sbjct: 233 EI 234
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E F+ E I+ ++ H +V++ E + +V E++ GSL ++ + L +
Sbjct: 49 ESFLEEAQIMKKLKHDKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKDGEGRALKLP-- 105
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
+ + +V+ ++Y+ + I H D++SANIL+ + KI+DF +R I+
Sbjct: 106 NLVDMAAQVAAGMAYIERMNYI---HRDLRSANILVGNGLICKIADFGL--ARLIEDNEX 160
Query: 139 TTQVKVTFG--YVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
T + F + P+ +FT KSDV+SF ++L EL
Sbjct: 161 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 199
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 139
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + RT
Sbjct: 140 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 190
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 191 TLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 230
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 19/182 (10%)
Query: 9 KSKSVHESNVEQFINEVVILSQINHR-NVVKILGCCLETEVPLLVY-EFIPNGSLYQYIH 66
K + H S ++E+ IL I H NVV +LG C + PL+V EF G+L Y+
Sbjct: 57 KEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLR 115
Query: 67 EQTDDQLP------------ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL 114
+ ++ +P +T E + + +V++ + +L S I H D+ + NILL
Sbjct: 116 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILL 172
Query: 115 VDKYQAKISDFRTFKSRAIDRTHL-TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLV 173
+K KI DF + D + ++ ++ P+ +T +SDV+SF V+L
Sbjct: 173 SEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 232
Query: 174 EL 175
E+
Sbjct: 233 EI 234
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 118
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + RT
Sbjct: 119 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 169
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 170 TLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 209
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + RT
Sbjct: 117 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 167
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 168 TLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 207
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH------EQTDDQL 73
+F+NE ++ + N +VV++LG + + L++ E + G L Y+ E
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RA 132
P + +++ E++ ++YL++ + H D+ + N ++ + + KI DF +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIYE 177
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D + + ++ P+ + FT SDV+SF VVL E+
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH------EQTDDQL 73
+F+NE ++ + N +VV++LG + + L++ E + G L Y+ E
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RA 132
P + +++ E++ ++YL++ + H D+ + N ++ + + KI DF +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D + + ++ P+ + FT SDV+SF VVL E+
Sbjct: 184 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + RT
Sbjct: 114 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 164
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 165 TLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 19/218 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E INE++++ + + N+V L L + +V E++ GSL + E D+ I
Sbjct: 62 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV 121
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
R E + L +LHS I H DIKS NILL K++DF +++
Sbjct: 122 CR-----ECLQALEFLHSNQVI---HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173
Query: 139 TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYF-- 196
+ V + ++ P+ + K D++S ++ +E+ +P +L EN A Y
Sbjct: 174 SEMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL---NENPLRALYLIA 229
Query: 197 ---SKEAEKEEVIT--FAMVAKRCLNLNGKKQPTMKEV 229
+ E + E ++ F RCL+++ +K+ + KE+
Sbjct: 230 TNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL 267
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 21/169 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCL-ETEVPL-LVYEFIPNGSLYQYIHEQTDD 71
H S +Q E+ IL + H +++K GCC + E L LV E++P GSL Y+ +
Sbjct: 59 HRSGWKQ---EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-- 113
Query: 72 QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSR 131
I L ++ ++YLHS I H ++ + N+LL + KI DF ++
Sbjct: 114 ---IGLAQLLLFAQQICEGMAYLHSQHYI---HRNLAARNVLLDNDRLVKIGDFGL--AK 165
Query: 132 AIDRTHLTTQVK-----VTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
A+ H +V+ F Y P+ + +F SDV+SF V L EL
Sbjct: 166 AVPEGHEYYRVREDGDSPVFWYA-PECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + RT
Sbjct: 117 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 167
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 168 TLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 207
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 86/165 (52%), Gaps = 17/165 (10%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
++ F NEV +L + H N++ +G + ++ + V ++ SLY ++H + +
Sbjct: 76 LQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH-----IIETKF 129
Query: 78 EM--RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR--TFKSRAI 133
EM + I + ++ + YLH+ + I H D+KS NI L + KI DF T KSR
Sbjct: 130 EMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSR-W 185
Query: 134 DRTHLTTQVKVTFGYVDPKYFR---SSQFTEKSDVYSFSVVLVEL 175
+H Q+ + ++ P+ R + ++ +SDVY+F +VL EL
Sbjct: 186 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 230
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH------EQTDDQL 73
+F+NE ++ + N +VV++LG + + L++ E + G L Y+ E
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RA 132
P + +++ E++ ++YL++ + H D+ + N ++ + + KI DF +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIYE 184
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D + + ++ P+ + FT SDV+SF VVL E+
Sbjct: 185 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Query: 15 ESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
E ++ ++E+ ++ I H+N++ +LG C + ++ + G+L +Y+ + +
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGM 140
Query: 74 PITWEMR------------LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
++++ + T +++R + YL S I H D+ + N+L+ + K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMK 197
Query: 122 ISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
I+DF + ID TT ++ ++ P+ +T +SDV+SF V++ E+
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH------EQTDDQL 73
+F+NE ++ + N +VV++LG + + L++ E + G L Y+ E
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RA 132
P + +++ E++ ++YL++ + H D+ + N ++ + + KI DF +
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIYE 181
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D + + ++ P+ + FT SDV+SF VVL E+
Sbjct: 182 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 118
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + RT
Sbjct: 119 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 169
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 170 TLCG----TLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKP 209
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 86/165 (52%), Gaps = 17/165 (10%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
++ F NEV +L + H N++ +G + ++ + V ++ SLY ++H + +
Sbjct: 75 LQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH-----IIETKF 128
Query: 78 EM--RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR--TFKSRAI 133
EM + I + ++ + YLH+ + I H D+KS NI L + KI DF T KSR
Sbjct: 129 EMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSR-W 184
Query: 134 DRTHLTTQVKVTFGYVDPKYFR---SSQFTEKSDVYSFSVVLVEL 175
+H Q+ + ++ P+ R + ++ +SDVY+F +VL EL
Sbjct: 185 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 229
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH------EQTDDQL 73
+F+NE ++ + N +VV++LG + + L++ E + G L Y+ E
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RA 132
P + +++ E++ ++YL++ + H D+ + N ++ + + KI DF +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D + + ++ P+ + FT SDV+SF VVL E+
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 17 NVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPIT 76
+VE F+ E ++ + H +VK L + E ++ EF+ GSL ++ + P+
Sbjct: 53 SVEAFLAEANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP 111
Query: 77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT 136
+ + +++ ++++ I H D+++ANIL+ KI+DF +R I+
Sbjct: 112 --KLIDFSAQIAEGMAFIEQRNYI---HRDLRAANILVSASLVCKIADFGL--ARVIEDN 164
Query: 137 HLTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
T + K + P+ FT KSDV+SF ++L+E+
Sbjct: 165 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 205
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 80/165 (48%), Gaps = 10/165 (6%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E +F++E I+ Q H N++++ G + +++ EF+ NG+L ++ D Q
Sbjct: 58 ERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR-LNDGQFT 116
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSR 131
+ +++ + + S + +A + H D+ + NIL+ K+SDF R +
Sbjct: 117 V-----IQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEEN 171
Query: 132 AIDRTHLTT-QVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ D T ++ K+ + P+ +FT SD +S+ +V+ E+
Sbjct: 172 SSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEV 216
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Query: 15 ESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
E ++ ++E+ ++ I H+N++ +LG C + ++ + G+L +Y+ + +
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGM 140
Query: 74 PITWEMR------------LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
++++ + T +++R + YL S I H D+ + N+L+ + K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMK 197
Query: 122 ISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
I+DF + ID TT ++ ++ P+ +T +SDV+SF V++ E+
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 53 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 112
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + RT
Sbjct: 113 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 163
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 164 TLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 203
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 51 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 110
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + RT
Sbjct: 111 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 161
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 162 TLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 201
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH------EQTDDQL 73
+F+NE ++ + N +VV++LG + + L++ E + G L Y+ E
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RA 132
P + +++ E++ ++YL++ + H D+ + N ++ + + KI DF +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D + + ++ P+ + FT SDV+SF VVL E+
Sbjct: 184 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 86/165 (52%), Gaps = 17/165 (10%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
++ F NEV +L + H N++ +G + ++ + V ++ SLY ++H + +
Sbjct: 53 LQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH-----IIETKF 106
Query: 78 EM--RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR--TFKSRAI 133
EM + I + ++ + YLH+ + I H D+KS NI L + KI DF T KSR
Sbjct: 107 EMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW- 162
Query: 134 DRTHLTTQVKVTFGYVDPKYFR---SSQFTEKSDVYSFSVVLVEL 175
+H Q+ + ++ P+ R + ++ +SDVY+F +VL EL
Sbjct: 163 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 207
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 117
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + RT
Sbjct: 118 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 168
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 169 TLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 208
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 86/165 (52%), Gaps = 17/165 (10%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
++ F NEV +L + H N++ +G + ++ + V ++ SLY ++H + +
Sbjct: 48 LQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHI-----IETKF 101
Query: 78 EM--RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR--TFKSRAI 133
EM + I + ++ + YLH+ + I H D+KS NI L + KI DF T KSR
Sbjct: 102 EMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW- 157
Query: 134 DRTHLTTQVKVTFGYVDPKYFR---SSQFTEKSDVYSFSVVLVEL 175
+H Q+ + ++ P+ R + ++ +SDVY+F +VL EL
Sbjct: 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 202
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 86/165 (52%), Gaps = 17/165 (10%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
++ F NEV +L + H N++ +G + ++ + V ++ SLY ++H + +
Sbjct: 53 LQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH-----IIETKF 106
Query: 78 EM--RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR--TFKSRAI 133
EM + I + ++ + YLH+ + I H D+KS NI L + KI DF T KSR
Sbjct: 107 EMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW- 162
Query: 134 DRTHLTTQVKVTFGYVDPKYFR---SSQFTEKSDVYSFSVVLVEL 175
+H Q+ + ++ P+ R + ++ +SDVY+F +VL EL
Sbjct: 163 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 207
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH------EQTDDQL 73
+F+NE ++ +VV++LG + + L+V E + +G L Y+ E +
Sbjct: 67 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 126
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RA 132
P T + +++ E++ ++YL++ + H ++ + N ++ + KI DF +
Sbjct: 127 PPTLQEMIQMAAEIADGMAYLNAKKFV---HRNLAARNCMVAHDFTVKIGDFGMTRDIYE 183
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENR 190
D + + ++ P+ + FT SD++SF VVL E+ +P + E+
Sbjct: 184 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 243
Query: 191 SL---AAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
Y + E +T M + C N +PT E+
Sbjct: 244 KFVMDGGYLDQPDNCPERVTDLM--RMCWQFNPNMRPTFLEI 283
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH------EQTDDQL 73
+F+NE ++ + N +VV++LG + + L++ E + G L Y+ E
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RA 132
P + +++ E++ ++YL++ + H D+ + N ++ + + KI DF +
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIYE 212
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D + + ++ P+ + FT SDV+SF VVL E+
Sbjct: 213 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 19/182 (10%)
Query: 9 KSKSVHESNVEQFINEVVILSQINHR-NVVKILGCCLETEVPLLV-YEFIPNGSLYQYIH 66
K + H S ++E+ IL I H NVV +LG C + PL+V EF G+L Y+
Sbjct: 66 KEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 124
Query: 67 EQTDDQLP------------ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL 114
+ ++ +P +T E + + +V++ + +L S I H D+ + NILL
Sbjct: 125 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILL 181
Query: 115 VDKYQAKISDFRTFKSRAIDRTHL-TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLV 173
+K KI DF + D + ++ ++ P+ +T +SDV+SF V+L
Sbjct: 182 SEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 241
Query: 174 EL 175
E+
Sbjct: 242 EI 243
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 86/165 (52%), Gaps = 17/165 (10%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
++ F NEV +L + H N++ +G + ++ + V ++ SLY ++H + +
Sbjct: 50 LQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHI-----IETKF 103
Query: 78 EM--RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR--TFKSRAI 133
EM + I + ++ + YLH+ + I H D+KS NI L + KI DF T KSR
Sbjct: 104 EMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW- 159
Query: 134 DRTHLTTQVKVTFGYVDPKYFR---SSQFTEKSDVYSFSVVLVEL 175
+H Q+ + ++ P+ R + ++ +SDVY+F +VL EL
Sbjct: 160 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 204
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH------EQTDDQL 73
+F+NE ++ +VV++LG + + L+V E + +G L Y+ E +
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RA 132
P T + +++ E++ ++YL++ + H ++ + N ++ + KI DF +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFV---HRNLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENR 190
D + + ++ P+ + FT SD++SF VVL E+ +P + E+
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
Query: 191 SL---AAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
Y + E +T M + C N +PT E+
Sbjct: 243 KFVMDGGYLDQPDNCPERVTDLM--RMCWQFNPNMRPTFLEI 282
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 19/218 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E INE++++ + + N+V L L + +V E++ GSL + E D+ I
Sbjct: 63 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV 122
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
R E + L +LHS I H DIKS NILL K++DF +++
Sbjct: 123 CR-----ECLQALEFLHSNQVI---HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 174
Query: 139 TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYF-- 196
+ V + ++ P+ + K D++S ++ +E+ +P +L EN A Y
Sbjct: 175 SXMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL---NENPLRALYLIA 230
Query: 197 ---SKEAEKEEVIT--FAMVAKRCLNLNGKKQPTMKEV 229
+ E + E ++ F RCL ++ +K+ + KE+
Sbjct: 231 TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKEL 268
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 19/218 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E INE++++ + + N+V L L + +V E++ GSL + E D+ I
Sbjct: 63 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV 122
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
R E + L +LHS I H +IKS NILL K++DF +++
Sbjct: 123 CR-----ECLQALEFLHSNQVI---HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 174
Query: 139 TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYF-- 196
+T V + ++ P+ + K D++S ++ +E+ +P +L EN A Y
Sbjct: 175 STMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL---NENPLRALYLIA 230
Query: 197 ---SKEAEKEEVIT--FAMVAKRCLNLNGKKQPTMKEV 229
+ E + E ++ F RCL ++ +K+ + KE+
Sbjct: 231 TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKEL 268
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G +Y+ + + + D+Q T+
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY 118
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + R
Sbjct: 119 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRX 169
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 170 XLXG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 209
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 81/160 (50%), Gaps = 12/160 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E F+ E ++ ++ H +V++ E + +V E++ GSL ++ +T L
Sbjct: 307 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYL----- 360
Query: 79 MRLRITVEVS-RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
RL V+++ ++ S + V + H D+++ANIL+ + K++DF +R I+
Sbjct: 361 -RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL--ARLIEDNE 417
Query: 138 LTTQVKVTFG--YVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
T + F + P+ +FT KSDV+SF ++L EL
Sbjct: 418 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 457
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 81/161 (50%), Gaps = 12/161 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E F+ E ++ ++ H +V++ E + +V E++ GSL ++ +T L
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYL----- 277
Query: 79 MRLRITVEVS-RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
RL V+++ ++ S + V + H D+++ANIL+ + K++DF +R I+
Sbjct: 278 -RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL--ARLIEDNE 334
Query: 138 LTTQVKVTF--GYVDPKYFRSSQFTEKSDVYSFSVVLVELN 176
T + F + P+ +FT KSDV+SF ++L EL
Sbjct: 335 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 375
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 19/218 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E INE++++ + + N+V L L + +V E++ GSL + E D+ I
Sbjct: 62 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV 121
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
R E + L +LHS I H DIKS NILL K++DF +++
Sbjct: 122 CR-----ECLQALEFLHSNQVI---HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173
Query: 139 TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYF-- 196
+ V + ++ P+ + K D++S ++ +E+ +P +L EN A Y
Sbjct: 174 SXMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL---NENPLRALYLIA 229
Query: 197 ---SKEAEKEEVIT--FAMVAKRCLNLNGKKQPTMKEV 229
+ E + E ++ F RCL ++ +K+ + KE+
Sbjct: 230 TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKEL 267
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 28/173 (16%)
Query: 21 FINEVVILSQINHR-NVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE----QTDDQLPI 75
F E+ +L ++ H N++ +LG C L E+ P+G+L ++ + +TD I
Sbjct: 72 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 131
Query: 76 --------TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRT 127
+ + L +V+R + YL I H D+ + NIL+ + Y AKI+DF
Sbjct: 132 ANSTASTLSSQQLLHFAADVARGMDYLSQKQFI---HRDLAARNILVGENYVAKIADFGL 188
Query: 128 FKSRAIDRTHLTTQVKVTFGYVDPKY-----FRSSQFTEKSDVYSFSVVLVEL 175
+ + + VK T G + ++ S +T SDV+S+ V+L E+
Sbjct: 189 SRGQEV-------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 234
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 81/161 (50%), Gaps = 12/161 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E F+ E ++ ++ H +V++ E + +V E++ GSL ++ +T L
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYL----- 277
Query: 79 MRLRITVEVS-RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
RL V+++ ++ S + V + H D+++ANIL+ + K++DF +R I+
Sbjct: 278 -RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL--ARLIEDNE 334
Query: 138 LTTQVKVTF--GYVDPKYFRSSQFTEKSDVYSFSVVLVELN 176
T + F + P+ +FT KSDV+SF ++L EL
Sbjct: 335 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 375
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 81/161 (50%), Gaps = 12/161 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E F+ E ++ ++ H +V++ E + +V E++ GSL ++ +T L
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVGEYMSKGSLLDFLKGETGKYL----- 277
Query: 79 MRLRITVEVS-RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
RL V+++ ++ S + V + H D+++ANIL+ + K++DF +R I+
Sbjct: 278 -RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL--ARLIEDNE 334
Query: 138 LTTQVKVTF--GYVDPKYFRSSQFTEKSDVYSFSVVLVELN 176
T + F + P+ +FT KSDV+SF ++L EL
Sbjct: 335 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 375
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 83/178 (46%), Gaps = 17/178 (9%)
Query: 12 SVHESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
+ H E ++E+ I+S + H N+V +LG C L++ E+ G L ++ +
Sbjct: 87 TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRP 146
Query: 71 DQLPITWEMR------------LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY 118
L ++ L + +V++ +++L S I H D+ + N+LL + +
Sbjct: 147 PGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGH 203
Query: 119 QAKISDFRTFKSRAIDRTHLT-TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
AKI DF + D ++ ++ ++ P+ +T +SDV+S+ ++L E+
Sbjct: 204 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 261
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 17/165 (10%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
++ F NEV +L + H N++ +G ++ + V ++ SLY ++H + +
Sbjct: 48 LQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAI-VTQWCEGSSLYHHLHI-----IETKF 101
Query: 78 EM--RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR--TFKSRAI 133
EM + I + ++ + YLH+ + I H D+KS NI L + KI DF T KSR
Sbjct: 102 EMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW- 157
Query: 134 DRTHLTTQVKVTFGYVDPKYFR---SSQFTEKSDVYSFSVVLVEL 175
+H Q+ + ++ P+ R + ++ +SDVY+F +VL EL
Sbjct: 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 202
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 28/173 (16%)
Query: 21 FINEVVILSQINHR-NVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE----QTDDQLPI 75
F E+ +L ++ H N++ +LG C L E+ P+G+L ++ + +TD I
Sbjct: 62 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 121
Query: 76 --------TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRT 127
+ + L +V+R + YL I H D+ + NIL+ + Y AKI+DF
Sbjct: 122 ANSTASTLSSQQLLHFAADVARGMDYLSQKQFI---HRDLAARNILVGENYVAKIADFGL 178
Query: 128 FKSRAIDRTHLTTQVKVTFGYVDPKY-----FRSSQFTEKSDVYSFSVVLVEL 175
+ + + VK T G + ++ S +T SDV+S+ V+L E+
Sbjct: 179 SRGQEV-------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 224
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E F+ E ++ +I H +V++ E + +V E++ GSL ++ + L
Sbjct: 58 EAFLQEAQVMKKIRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYL----- 111
Query: 79 MRLRITVEVS-RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
RL V+++ ++ S + V + H D+++ANIL+ + K++DF +R I+
Sbjct: 112 -RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL--ARLIEDNE 168
Query: 138 LTTQVKVTFG--YVDPKYFRSSQFTEKSDVYSFSVVLVELN 176
T + F + P+ +FT KSDV+SF ++L EL
Sbjct: 169 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 21/169 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCL-ETEVPL-LVYEFIPNGSLYQYIHEQTDD 71
H S +Q E+ IL + H +++K GCC + E L LV E++P GSL Y+ +
Sbjct: 59 HRSGWKQ---EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-- 113
Query: 72 QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSR 131
I L ++ ++YLH+ I H ++ + N+LL + KI DF ++
Sbjct: 114 ---IGLAQLLLFAQQICEGMAYLHAQHYI---HRNLAARNVLLDNDRLVKIGDFGL--AK 165
Query: 132 AIDRTHLTTQVK-----VTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
A+ H +V+ F Y P+ + +F SDV+SF V L EL
Sbjct: 166 AVPEGHEYYRVREDGDSPVFWYA-PECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 86/165 (52%), Gaps = 17/165 (10%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
++ F NEV +L + H N++ +G + ++ + V ++ SLY ++H + +
Sbjct: 76 LQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH-----IIETKF 129
Query: 78 EM--RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR--TFKSRAI 133
EM + I + ++ + YLH+ + I H D+KS NI L + KI DF T KSR
Sbjct: 130 EMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSR-W 185
Query: 134 DRTHLTTQVKVTFGYVDPKYFR---SSQFTEKSDVYSFSVVLVEL 175
+H Q+ + ++ P+ R + ++ +SDVY+F +VL EL
Sbjct: 186 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 230
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G ++ L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + R
Sbjct: 114 ------ITELANALSYCHSKKVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA 164
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 165 ALCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 86/165 (52%), Gaps = 17/165 (10%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
++ F NEV +L + H N++ +G + ++ + V ++ SLY ++H + +
Sbjct: 68 LQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH-----IIETKF 121
Query: 78 EM--RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR--TFKSRAI 133
EM + I + ++ + YLH+ + I H D+KS NI L + KI DF T KSR
Sbjct: 122 EMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSR-W 177
Query: 134 DRTHLTTQVKVTFGYVDPKYFR---SSQFTEKSDVYSFSVVLVEL 175
+H Q+ + ++ P+ R + ++ +SDVY+F +VL EL
Sbjct: 178 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 222
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 86/165 (52%), Gaps = 17/165 (10%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
++ F NEV +L + H N++ +G + ++ + V ++ SLY ++H + +
Sbjct: 48 LQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH-----IIETKF 101
Query: 78 EM--RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR--TFKSRAI 133
EM + I + ++ + YLH+ + I H D+KS NI L + KI DF T KSR
Sbjct: 102 EMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRW- 157
Query: 134 DRTHLTTQVKVTFGYVDPKYFR---SSQFTEKSDVYSFSVVLVEL 175
+H Q+ + ++ P+ R + ++ +SDVY+F +VL EL
Sbjct: 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 202
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 17 NVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPIT 76
+VE F+ E ++ + H +VK L + E ++ EF+ GSL ++ + P+
Sbjct: 226 SVEAFLAEANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP 284
Query: 77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT 136
+ + +++ ++++ I H D+++ANIL+ KI+DF +R I+
Sbjct: 285 --KLIDFSAQIAEGMAFIEQRNYI---HRDLRAANILVSASLVCKIADFGL--ARVIEDN 337
Query: 137 HLTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
T + K + P+ FT KSDV+SF ++L+E+
Sbjct: 338 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 378
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 78/159 (49%), Gaps = 12/159 (7%)
Query: 21 FINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
F++E I+ Q +H N++ + G + + +++ E++ NGSL ++ + I
Sbjct: 77 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGM 136
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI----DRT 136
LR + + YL ++++ H D+ + NIL+ K+SDF SR + +
Sbjct: 137 LR---GIGSGMKYLSDMSAV---HRDLAARNILVNSNLVCKVSDFGM--SRVLEDDPEAA 188
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ T K+ + P+ +FT SDV+S+ +V+ E+
Sbjct: 189 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 227
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + R
Sbjct: 117 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA 167
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 168 ALCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 207
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 80/161 (49%), Gaps = 9/161 (5%)
Query: 17 NVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPIT 76
+V+ F+ E ++ + H +V++ E ++ E++ GSL ++ ++D+ +
Sbjct: 51 SVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFL--KSDEGGKVL 108
Query: 77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT 136
+ + +++ ++Y+ I H D+++AN+L+ + KI+DF +R I+
Sbjct: 109 LPKLIDFSAQIAEGMAYIERKNYI---HRDLRAANVLVSESLMCKIADFGL--ARVIEDN 163
Query: 137 HLTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
T + K + P+ FT KSDV+SF ++L E+
Sbjct: 164 EYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEI 204
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + R
Sbjct: 114 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA 164
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 165 ALCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 81/161 (50%), Gaps = 9/161 (5%)
Query: 17 NVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPIT 76
+V+ F+ E ++ + H +V++ + E ++ EF+ GSL ++ ++D+ +
Sbjct: 50 SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFL--KSDEGGKVL 107
Query: 77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT 136
+ + +++ ++Y+ I H D+++AN+L+ + KI+DF +R I+
Sbjct: 108 LPKLIDFSAQIAEGMAYIERKNYI---HRDLRAANVLVSESLMCKIADFGL--ARVIEDN 162
Query: 137 HLTTQ--VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
T + K + P+ FT KS+V+SF ++L E+
Sbjct: 163 EYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEI 203
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 77/163 (47%), Gaps = 10/163 (6%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH------EQTDDQL 73
+F+NE ++ + N +VV++LG + + L++ E + G L Y+ E
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RA 132
P + +++ E++ ++YL++ + H D+ + N + + + KI DF +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCXVAEDFTVKIGDFGMTRDIYE 177
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D + + ++ P+ + FT SDV+SF VVL E+
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 85/167 (50%), Gaps = 10/167 (5%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI-----HE---QTD 70
E+F +E ++ +++ H NVV +LG + + +++ + +G L++++ H TD
Sbjct: 57 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 116
Query: 71 DQLPITWEMRLRITVE-VSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
D + + V V+++ + + ++S + H D+ + N+L+ DK KISD F+
Sbjct: 117 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFR 176
Query: 130 S-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
A D L + ++ P+ +F+ SD++S+ VVL E+
Sbjct: 177 EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 223
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E F+ E ++ ++ H +V++ E + +V E++ GSL ++ + L
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKYL----- 111
Query: 79 MRLRITVEVS-RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
RL V+++ ++ S + V + H D+++ANIL+ + K++DF +R I+
Sbjct: 112 -RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL--ARLIEDNE 168
Query: 138 LTTQVKVTFG--YVDPKYFRSSQFTEKSDVYSFSVVLVELN 176
T + F + P+ +FT KSDV+SF ++L EL
Sbjct: 169 XTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 10/167 (5%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPIT-- 76
+ F E +L+ + H ++VK G C + + ++V+E++ +G L +++ D + +
Sbjct: 62 KDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDG 121
Query: 77 ------WEMRLRITVEV-SRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
E+ L + + S++ S + +AS H D+ + N L+ KI DF +
Sbjct: 122 QPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181
Query: 130 S-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ D + + ++ P+ +FT +SDV+SF V+L E+
Sbjct: 182 DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEI 228
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + R
Sbjct: 117 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRX 167
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 168 XLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 207
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 85/167 (50%), Gaps = 10/167 (5%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI-----HE---QTD 70
E+F +E ++ +++ H NVV +LG + + +++ + +G L++++ H TD
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 133
Query: 71 DQLPITWEMRLRITVE-VSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
D + + V V+++ + + ++S + H D+ + N+L+ DK KISD F+
Sbjct: 134 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFR 193
Query: 130 S-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
A D L + ++ P+ +F+ SD++S+ VVL E+
Sbjct: 194 EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 240
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 115
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + R
Sbjct: 116 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRX 166
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 167 XLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 206
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E F+ E ++ ++ H +V++ E + +V E++ GSL ++ + L
Sbjct: 49 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYL----- 102
Query: 79 MRLRITVEVS-RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
RL V+++ ++ S + V + H D+++ANIL+ + K++DF +R I+
Sbjct: 103 -RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL--ARLIEDNE 159
Query: 138 LTTQVKVTFG--YVDPKYFRSSQFTEKSDVYSFSVVLVELN 176
T + F + P+ +FT KSDV+SF ++L EL
Sbjct: 160 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 200
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 139
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + R
Sbjct: 140 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD 190
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 191 DLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 230
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + R
Sbjct: 114 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRX 164
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 165 XLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E F+ E ++ ++ H +V++ E + +V E++ GSL ++ + L
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVCEYMSKGSLLDFLKGEMGKYL----- 111
Query: 79 MRLRITVEVS-RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
RL V+++ ++ S + V + H D+++ANIL+ + K++DF +R I+
Sbjct: 112 -RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL--ARLIEDNE 168
Query: 138 LTTQVKVTFG--YVDPKYFRSSQFTEKSDVYSFSVVLVELN 176
T + F + P+ +FT KSDV+SF ++L EL
Sbjct: 169 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E F+ E ++ ++ H +V++ E + +V E++ GSL ++ + L
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYL----- 111
Query: 79 MRLRITVEVS-RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
RL V+++ ++ S + V + H D+++ANIL+ + K++DF +R I+
Sbjct: 112 -RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL--ARLIEDNE 168
Query: 138 LTTQVKVTFG--YVDPKYFRSSQFTEKSDVYSFSVVLVELN 176
T + F + P+ +FT KSDV+SF ++L EL
Sbjct: 169 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 115
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI++F + + + RT
Sbjct: 116 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIANFGWSVHAPSSRRT 166
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 167 TLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 206
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E F+ E ++ ++ H +V++ E + +V E++ GSL ++ + L
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKYL----- 111
Query: 79 MRLRITVEVS-RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
RL V+++ ++ S + V + H D+++ANIL+ + K++DF +R I+
Sbjct: 112 -RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL--ARLIEDNE 168
Query: 138 LTTQVKVTFG--YVDPKYFRSSQFTEKSDVYSFSVVLVELN 176
T + F + P+ +FT KSDV+SF ++L EL
Sbjct: 169 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E F+ E ++ ++ H +V++ E + +V E++ GSL ++ + L
Sbjct: 47 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYL----- 100
Query: 79 MRLRITVEVS-RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
RL V+++ ++ S + V + H D+++ANIL+ + K++DF +R I+
Sbjct: 101 -RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL--ARLIEDNE 157
Query: 138 LTTQVKVTFG--YVDPKYFRSSQFTEKSDVYSFSVVLVELN 176
T + F + P+ +FT KSDV+SF ++L EL
Sbjct: 158 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 198
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + R
Sbjct: 117 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD 167
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 168 DLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 207
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 77/163 (47%), Gaps = 10/163 (6%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQ------L 73
+F+NE ++ + N +VV++LG + + L++ E + G L Y+
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RA 132
P + +++ E++ ++YL++ + H D+ + N ++ + + KI DF +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D + + ++ P+ + FT SDV+SF VVL E+
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 77/163 (47%), Gaps = 10/163 (6%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQ------L 73
+F+NE ++ + N +VV++LG + + L++ E + G L Y+
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS-RA 132
P + +++ E++ ++YL++ + H D+ + N ++ + + KI DF +
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIYE 180
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
D + + ++ P+ + FT SDV+SF VVL E+
Sbjct: 181 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 23 NEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLR 82
+ ++ + ++H ++V++LG C + + LV +++P GSL ++ + P ++ L
Sbjct: 64 DHMLAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHVRQHRGALGP---QLLLN 119
Query: 83 ITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLT-TQ 141
V++++ + YL + H ++ + N+LL Q +++DF D L ++
Sbjct: 120 WGVQIAKGMYYLEEHGMV---HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE 176
Query: 142 VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAYFSKE 199
K ++ + ++T +SDV+S+ V + EL +P + + E L +
Sbjct: 177 AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERL 236
Query: 200 AEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLEL 233
A+ + I MV +C ++ +PT KE+ E
Sbjct: 237 AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEF 271
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 23 NEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLR 82
+ ++ + ++H ++V++LG C + + LV +++P GSL ++ + P ++ L
Sbjct: 82 DHMLAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHVRQHRGALGP---QLLLN 137
Query: 83 ITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLT-TQ 141
V++++ + YL + H ++ + N+LL Q +++DF D L ++
Sbjct: 138 WGVQIAKGMYYLEEHGMV---HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE 194
Query: 142 VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN--WTKPIHLVDVEENRSLAAYFSKE 199
K ++ + ++T +SDV+S+ V + EL +P + + E L +
Sbjct: 195 AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERL 254
Query: 200 AEKE-EVITFAMVAKRCLNLNGKKQPTMKEVTLEL 233
A+ + I MV +C ++ +PT KE+ E
Sbjct: 255 AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEF 289
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI++F + + + RT
Sbjct: 117 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIANFGWSVHAPSSRRT 167
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 168 TLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 207
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 16/164 (9%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 114
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + R
Sbjct: 115 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD 165
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
L T Y+ P+ EK D++S V+ E KP
Sbjct: 166 TLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 205
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 16/159 (10%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY 117
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + RT
Sbjct: 118 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSNGELKIADFGWSVHAPSSRRT 168
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
L T Y+ P+ EK D++S V+ E
Sbjct: 169 TLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 203
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 80/159 (50%), Gaps = 12/159 (7%)
Query: 21 FINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
F++E I+ Q +H N++ + G + + +++ E++ NGSL ++ + D + +
Sbjct: 56 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR-KNDGRFTV----- 109
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI----DRT 136
+++ + + S + ++ + H D+ + NIL+ K+SDF SR + +
Sbjct: 110 IQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGM--SRVLEDDPEAA 167
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ T K+ + P+ +FT SDV+S+ +V+ E+
Sbjct: 168 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 206
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 80/159 (50%), Gaps = 12/159 (7%)
Query: 21 FINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
F++E I+ Q +H N++ + G + + +++ E++ NGSL ++ + D + +
Sbjct: 62 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR-KNDGRFTV----- 115
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI----DRT 136
+++ + + S + ++ + H D+ + NIL+ K+SDF SR + +
Sbjct: 116 IQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGM--SRVLEDDPEAA 173
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ T K+ + P+ +FT SDV+S+ +V+ E+
Sbjct: 174 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 212
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 28/173 (16%)
Query: 21 FINEVVILSQINHR-NVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE----QTDDQLPI 75
F E+ +L ++ H N++ +LG C L E+ P+G+L ++ + +TD I
Sbjct: 69 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 128
Query: 76 --------TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRT 127
+ + L +V+R + YL I H ++ + NIL+ + Y AKI+DF
Sbjct: 129 ANSTASTLSSQQLLHFAADVARGMDYLSQKQFI---HRNLAARNILVGENYVAKIADFGL 185
Query: 128 FKSRAIDRTHLTTQVKVTFGYVDPKY-----FRSSQFTEKSDVYSFSVVLVEL 175
+ + + VK T G + ++ S +T SDV+S+ V+L E+
Sbjct: 186 SRGQEV-------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 231
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 17/169 (10%)
Query: 20 QFINEVVILSQINHRNVVKILGCC-LETE---VPLLVYEFIPNGSLYQYIHEQTDDQLPI 75
+F E + +NH +V + ET +P +V E++ +L +H + P+
Sbjct: 58 RFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG----PM 113
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI-D 134
T + + + + + L++ H I H D+K ANI++ K+ DF +RAI D
Sbjct: 114 TPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGI--ARAIAD 168
Query: 135 RTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
+ TQ G Y+ P+ R +SDVYS VL E+ +P
Sbjct: 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEV-----PLLVYEFIPNGSLYQYIHEQT 69
+ +E+F++E + +H NV+++LG C+E P+++ F+ G L+ Y+
Sbjct: 77 QREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSR 136
Query: 70 DDQLP--ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRT 127
+ P I + L+ V+++ + YL ++ H D+ + N +L D ++DF
Sbjct: 137 LETGPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGL 193
Query: 128 FKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
K + D K+ ++ + +T KSDV++F V + E+
Sbjct: 194 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 14/170 (8%)
Query: 11 KSVHESNV--EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQ 68
K++ N+ E F+ E ++ ++ H +V++ E + +V E++ GSL ++ +
Sbjct: 215 KTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGE 273
Query: 69 TDDQLPITWEMRLRITVEVS-RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRT 127
L RL V+++ ++ S + V + H D+++ANIL+ + K++DF
Sbjct: 274 MGKYL------RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL 327
Query: 128 FKSRAIDRTHLTTQVKVTF--GYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
R I+ T + F + P+ +FT KSDV+SF ++L EL
Sbjct: 328 --GRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 375
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 12/161 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E F+ E ++ ++ H +V++ E + +V E++ GSL ++ + L
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYL----- 111
Query: 79 MRLRITVEVS-RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
RL V+++ ++ S + V + H D+ +ANIL+ + K++DF +R I+
Sbjct: 112 -RLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGL--ARLIEDNE 168
Query: 138 LTTQVKVTFG--YVDPKYFRSSQFTEKSDVYSFSVVLVELN 176
T + F + P+ +FT KSDV+SF ++L EL
Sbjct: 169 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 89/166 (53%), Gaps = 21/166 (12%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH-EQTDDQLPITW 77
+ F NEV +L + H N++ +G + + + V ++ SLY+++H ++T Q+ +
Sbjct: 77 QAFRNEVAVLRKTRHVNILLFMGYMTKDNLAI-VTQWCEGSSLYKHLHVQETKFQM---F 132
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR--TFKSRAIDR 135
++ + I + ++ + YLH+ I H D+KS NI L + KI DF T KSR
Sbjct: 133 QL-IDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG- 187
Query: 136 THLTTQVKVTFG---YVDPKYFR---SSQFTEKSDVYSFSVVLVEL 175
+ QV+ G ++ P+ R ++ F+ +SDVYS+ +VL EL
Sbjct: 188 ---SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYEL 230
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 12/161 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E F+ E ++ ++ H +V++ E + +V E++ G L ++ + L
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVMEYMSKGCLLDFLKGEMGKYL----- 111
Query: 79 MRLRITVEVS-RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
RL V+++ ++ S + V + H D+++ANIL+ + K++DF +R I+
Sbjct: 112 -RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL--ARLIEDNE 168
Query: 138 LTTQVKVTFG--YVDPKYFRSSQFTEKSDVYSFSVVLVELN 176
T + F + P+ +FT KSDV+SF ++L EL
Sbjct: 169 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 17/169 (10%)
Query: 20 QFINEVVILSQINHRNVVKILGCC-LETE---VPLLVYEFIPNGSLYQYIHEQTDDQLPI 75
+F E + +NH +V + ET +P +V E++ +L +H + P+
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG----PM 113
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI-D 134
T + + + + + L++ H I H D+K ANI++ K+ DF +RAI D
Sbjct: 114 TPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGI--ARAIAD 168
Query: 135 RTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
+ TQ G Y+ P+ R +SDVYS VL E+ +P
Sbjct: 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 17/169 (10%)
Query: 20 QFINEVVILSQINHRNVVKILGCC-LETE---VPLLVYEFIPNGSLYQYIHEQTDDQLPI 75
+F E + +NH +V + ET +P +V E++ +L +H + P+
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG----PM 113
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI-D 134
T + + + + + L++ H I H D+K ANI++ K+ DF +RAI D
Sbjct: 114 TPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGI--ARAIAD 168
Query: 135 RTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
+ TQ G Y+ P+ R +SDVYS VL E+ +P
Sbjct: 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 20 QFINEVVILSQINHRNVVKILGCC-LETE---VPLLVYEFIPNGSLYQYIHEQTDDQLPI 75
+F E + +NH +V + ET +P +V E++ +L +H + P+
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG----PM 113
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDR 135
T + + + + + L++ H I H D+K ANI++ K+ DF ++ A D
Sbjct: 114 TPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIA-DS 169
Query: 136 THLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
+ TQ G Y+ P+ R +SDVYS VL E+ +P
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 18/160 (11%)
Query: 23 NEVVILSQINHRNVVKILGCCLET--EVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
E+ IL + H ++VK GCC + + LV E++P GSL Y+ +
Sbjct: 59 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-----VGLAQL 113
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
L ++ ++YLH+ I H + + N+LL + KI DF ++A+ H
Sbjct: 114 LLFAQQICEGMAYLHAQHYI---HRALAARNVLLDNDRLVKIGDFGL--AKAVPEGHEYY 168
Query: 141 QVK-----VTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+V+ F Y P+ + +F SDV+SF V L EL
Sbjct: 169 RVREDGDSPVFWYA-PECLKECKFYYASDVWSFGVTLYEL 207
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 12/161 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E F+ E ++ ++ H +V++ E + +V E++ G L ++ + L
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGCLLDFLKGEMGKYL----- 111
Query: 79 MRLRITVEVS-RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
RL V+++ ++ S + V + H D+++ANIL+ + K++DF +R I+
Sbjct: 112 -RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL--ARLIEDNE 168
Query: 138 LTTQVKVTFG--YVDPKYFRSSQFTEKSDVYSFSVVLVELN 176
T + F + P+ +FT KSDV+SF ++L EL
Sbjct: 169 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 18/160 (11%)
Query: 23 NEVVILSQINHRNVVKILGCCLET--EVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
E+ IL + H ++VK GCC + + LV E++P GSL Y+ +
Sbjct: 60 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-----VGLAQL 114
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
L ++ ++YLH+ I H + + N+LL + KI DF ++A+ H
Sbjct: 115 LLFAQQICEGMAYLHAQHYI---HRALAARNVLLDNDRLVKIGDFGL--AKAVPEGHEYY 169
Query: 141 QVK-----VTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+V+ F Y P+ + +F SDV+SF V L EL
Sbjct: 170 RVREDGDSPVFWYA-PECLKECKFYYASDVWSFGVTLYEL 208
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 20 QFINEVVILSQINHRNVVKILGCC-LETE---VPLLVYEFIPNGSLYQYIHEQTDDQLPI 75
+F E + +NH +V + ET +P +V E++ +L +H + P+
Sbjct: 75 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG----PM 130
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDR 135
T + + + + + L++ H I H D+K ANI++ K+ DF ++ A D
Sbjct: 131 TPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIA-DS 186
Query: 136 THLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
+ TQ G Y+ P+ R +SDVYS VL E+ +P
Sbjct: 187 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 234
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 13/180 (7%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM 79
Q I E+ +L + N +V G + E + GSL Q + E I E+
Sbjct: 60 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR----IPEEI 115
Query: 80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLT 139
++++ V R L+YL I H D+K +NIL+ + + K+ DF + ID +
Sbjct: 116 LGKVSIAVLRGLAYLREKHQI--MHRDVKPSNILVNSRGEIKLCDF-GVSGQLIDS--MA 170
Query: 140 TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTK-PIHLVDVEENRSLAAYFSK 198
T Y+ P+ + + ++ +SD++S + LVEL + PI D +E L A F +
Sbjct: 171 NSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKE---LEAIFGR 227
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITW 77
++F E + +++H +VK G C E P+ +V E+I NG L Y+ P
Sbjct: 48 DEFFQEAQTMMKLSHPKLVKFYGVC-SKEYPIYIVTEYISNGCLLNYLRSHGKGLEP--- 103
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
L + +V +++L S I H D+ + N L+ K+SDF + D+
Sbjct: 104 SQLLEMCYDVCEGMAFLESHQFI---HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV 160
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ K + P+ F +++ KSDV++F +++ E+
Sbjct: 161 SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEV 198
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 105/238 (44%), Gaps = 23/238 (9%)
Query: 12 SVHESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
S H + E ++E+ +LS + NH N+V +LG C L++ E+ G L ++ + D
Sbjct: 64 SAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRD 123
Query: 71 DQL--------------PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD 116
+ + E L + +V++ +++L S I H D+ + NILL
Sbjct: 124 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI---HRDLAARNILLTH 180
Query: 117 KYQAKISDFRTFKSRAIDRTHLT-TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
KI DF + D ++ ++ ++ P+ + +T +SDV+S+ + L EL
Sbjct: 181 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 240
Query: 176 ----NWTKPIHLVDVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
+ P VD + + + F + + + K C + + K+PT K++
Sbjct: 241 FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 298
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 106/238 (44%), Gaps = 23/238 (9%)
Query: 12 SVHESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
S H + E ++E+ +LS + NH N+V +LG C L++ E+ G L ++ + D
Sbjct: 80 SAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRD 139
Query: 71 D--------------QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD 116
+L + E L + +V++ +++L S I H D+ + NILL
Sbjct: 140 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI---HRDLAARNILLTH 196
Query: 117 KYQAKISDFRTFKSRAIDRTHLT-TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
KI DF + D ++ ++ ++ P+ + +T +SDV+S+ + L EL
Sbjct: 197 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 256
Query: 176 ----NWTKPIHLVDVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
+ P VD + + + F + + + K C + + K+PT K++
Sbjct: 257 FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 314
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 106/238 (44%), Gaps = 23/238 (9%)
Query: 12 SVHESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
S H + E ++E+ +LS + NH N+V +LG C L++ E+ G L ++ + D
Sbjct: 82 SAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRD 141
Query: 71 D--------------QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD 116
+L + E L + +V++ +++L S I H D+ + NILL
Sbjct: 142 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI---HRDLAARNILLTH 198
Query: 117 KYQAKISDFRTFKSRAIDRTHLT-TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
KI DF + D ++ ++ ++ P+ + +T +SDV+S+ + L EL
Sbjct: 199 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 258
Query: 176 ----NWTKPIHLVDVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
+ P VD + + + F + + + K C + + K+PT K++
Sbjct: 259 FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 316
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 106/238 (44%), Gaps = 23/238 (9%)
Query: 12 SVHESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
S H + E ++E+ +LS + NH N+V +LG C L++ E+ G L ++ + D
Sbjct: 87 SAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRD 146
Query: 71 D--------------QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD 116
+L + E L + +V++ +++L S I H D+ + NILL
Sbjct: 147 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI---HRDLAARNILLTH 203
Query: 117 KYQAKISDFRTFKSRAIDRTHLT-TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
KI DF + D ++ ++ ++ P+ + +T +SDV+S+ + L EL
Sbjct: 204 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 263
Query: 176 ----NWTKPIHLVDVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
+ P VD + + + F + + + K C + + K+PT K++
Sbjct: 264 FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 321
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 106/238 (44%), Gaps = 23/238 (9%)
Query: 12 SVHESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
S H + E ++E+ +LS + NH N+V +LG C L++ E+ G L ++ + D
Sbjct: 87 SAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRD 146
Query: 71 D--------------QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD 116
+L + E L + +V++ +++L S I H D+ + NILL
Sbjct: 147 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI---HRDLAARNILLTH 203
Query: 117 KYQAKISDFRTFKSRAIDRTHLT-TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
KI DF + D ++ ++ ++ P+ + +T +SDV+S+ + L EL
Sbjct: 204 GRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 263
Query: 176 ----NWTKPIHLVDVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
+ P VD + + + F + + + K C + + K+PT K++
Sbjct: 264 FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 321
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 112/240 (46%), Gaps = 22/240 (9%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQ----TD 70
ES++++ I E+ I+ Q + +VVK G + +V E+ GS+ I + T+
Sbjct: 65 ESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTE 124
Query: 71 DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS 130
D++ + L + L YLH + I H DIK+ NILL + AK++DF
Sbjct: 125 DEIATILQSTL-------KGLEYLHFMRKI---HRDIKAGNILLNTEGHAKLADF-GVAG 173
Query: 131 RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENR 190
+ D V T ++ P+ + + +D++S + +E+ KP + D+ R
Sbjct: 174 QLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPY-ADIHPMR 232
Query: 191 SLAAYFSKEA---EKEEVIT--FAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIGASVL 245
++ + K E+ + F K+CL + +++ T ++ L+ +R++ G S+L
Sbjct: 233 AIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQL-LQHPFVRSAKGVSIL 291
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 16/159 (10%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE--QTDDQLPITW 77
Q EV I S + H N++++ G + L+ E+ P G++Y+ + + + D+Q T+
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY 117
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TFKSRAIDRT 136
E++ LSY HS I H DIK N+LL + KI+DF + + + R
Sbjct: 118 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSNGELKIADFGWSVHAPSSRRD 168
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
L T Y+ P+ EK D++S V+ E
Sbjct: 169 TLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 203
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 11 KSVHESNVEQ----FINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH 66
K++ E EQ F+ E +I+S++NH+N+V+ +G L++ ++ E + G L ++
Sbjct: 81 KTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR 140
Query: 67 E-QTDDQLPITWEM--RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
E + P + M L + +++ YL I H DI + N LL +++
Sbjct: 141 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVA 197
Query: 124 DFRTFK-SRAIDRTHLTTQVKVTF---GYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F +R I R + ++ P+ F FT K+D +SF V+L E+
Sbjct: 198 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 11 KSVHESNVEQ----FINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH 66
K++ E EQ F+ E +I+S++NH+N+V+ +G L++ ++ E + G L ++
Sbjct: 67 KTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR 126
Query: 67 E-QTDDQLPITWEM--RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
E + P + M L + +++ YL I H DI + N LL +++
Sbjct: 127 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVA 183
Query: 124 DFRTFK-SRAIDRTHLTTQVKVTF---GYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F +R I R + ++ P+ F FT K+D +SF V+L E+
Sbjct: 184 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 79/189 (41%), Gaps = 35/189 (18%)
Query: 15 ESNVEQFINEVVILSQINH-------------RNVVKILGCCLETEVPLLVYEFIPNGSL 61
E + ++EV++L+ +NH RN VK + + + E+ NG+L
Sbjct: 43 EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL 102
Query: 62 YQYIH-EQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA 120
Y IH E + Q W R+ ++ LSY+HS I H D+K NI + +
Sbjct: 103 YDLIHSENLNQQRDEYW----RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNV 155
Query: 121 KISDFRTFKS--RAID------------RTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVY 166
KI DF K+ R++D +LT+ + + + EK D+Y
Sbjct: 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMY 215
Query: 167 SFSVVLVEL 175
S ++ E+
Sbjct: 216 SLGIIFFEM 224
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 11 KSVHESNVEQ----FINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH 66
K++ E EQ F+ E +I+S+ NH+N+V+ +G L++ ++ E + G L ++
Sbjct: 66 KTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLR 125
Query: 67 E-QTDDQLPITWEM--RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
E + P + M L + +++ YL I H DI + N LL +++
Sbjct: 126 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVA 182
Query: 124 DFRTFK-SRAIDRTHLTTQVKVTF---GYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F +R I R + ++ P+ F FT K+D +SF V+L E+
Sbjct: 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 11 KSVHESNVEQ----FINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH 66
K++ E EQ F+ E +I+S+ NH+N+V+ +G L++ ++ E + G L ++
Sbjct: 58 KTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR 117
Query: 67 E-QTDDQLPITWEM--RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
E + P + M L + +++ YL I H DI + N LL +++
Sbjct: 118 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVA 174
Query: 124 DFRTFK-SRAIDRTHLTTQVKVTF---GYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F +R I R + ++ P+ F FT K+D +SF V+L E+
Sbjct: 175 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 230
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 16/159 (10%)
Query: 17 NVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPIT 76
+VE F+ E ++ + H +VK L + E ++ EF+ GSL ++ + P+
Sbjct: 220 SVEAFLAEANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP 278
Query: 77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT 136
+ + +++ ++++ I H D+++ANIL+ KI+DF + A
Sbjct: 279 --KLIDFSAQIAEGMAFIEQRNYI---HRDLRAANILVSASLVCKIADFGLARVGAKFPI 333
Query: 137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
T + FG FT KSDV+SF ++L+E+
Sbjct: 334 KWTAPEAINFG----------SFTIKSDVWSFGILLMEI 362
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 11 KSVHESNVEQ----FINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH 66
K++ E EQ F+ E +I+S+ NH+N+V+ +G L++ ++ E + G L ++
Sbjct: 84 KTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR 143
Query: 67 E-QTDDQLPITWEM--RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
E + P + M L + +++ YL I H DI + N LL +++
Sbjct: 144 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVA 200
Query: 124 DFRTFK-SRAIDRTHLTTQVKVTF---GYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F +R I R + ++ P+ F FT K+D +SF V+L E+
Sbjct: 201 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 11 KSVHESNVEQ----FINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH 66
K++ E EQ F+ E +I+S+ NH+N+V+ +G L++ ++ E + G L ++
Sbjct: 66 KTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR 125
Query: 67 E-QTDDQLPITWEM--RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
E + P + M L + +++ YL I H DI + N LL +++
Sbjct: 126 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVA 182
Query: 124 DFRTFK-SRAIDRTHLTTQVKVTF---GYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F +R I R + ++ P+ F FT K+D +SF V+L E+
Sbjct: 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 20 QFINEVVILSQINHRNVVKILGCC-LETE---VPLLVYEFIPNGSLYQYIHEQTDDQLPI 75
+F E + +NH +V + ET +P +V E++ +L +H + P+
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG----PM 113
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI-D 134
T + + + + + L++ H I H D+K ANIL+ K+ DF +RAI D
Sbjct: 114 TPKRAIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGI--ARAIAD 168
Query: 135 RTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
+ Q G Y+ P+ R +SDVYS VL E+ +P
Sbjct: 169 SGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 11 KSVHESNVEQ----FINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH 66
K++ E EQ F+ E +I+S+ NH+N+V+ +G L++ ++ E + G L ++
Sbjct: 81 KTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLR 140
Query: 67 E-QTDDQLPITWEM--RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
E + P + M L + +++ YL I H DI + N LL +++
Sbjct: 141 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVA 197
Query: 124 DFRTFK-SRAIDRTHLTTQVKVTF---GYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F +R I R + ++ P+ F FT K+D +SF V+L E+
Sbjct: 198 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 11 KSVHESNVEQ----FINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH 66
K++ E EQ F+ E +I+S+ NH+N+V+ +G L++ ++ E + G L ++
Sbjct: 67 KTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR 126
Query: 67 E-QTDDQLPITWEM--RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
E + P + M L + +++ YL I H DI + N LL +++
Sbjct: 127 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVA 183
Query: 124 DFRTFK-SRAIDRTHLTTQVKVTF---GYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F +R I R + ++ P+ F FT K+D +SF V+L E+
Sbjct: 184 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 11 KSVHESNVEQ----FINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH 66
K++ E EQ F+ E +I+S+ NH+N+V+ +G L++ ++ E + G L ++
Sbjct: 73 KTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR 132
Query: 67 E-QTDDQLPITWEM--RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
E + P + M L + +++ YL I H DI + N LL +++
Sbjct: 133 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVA 189
Query: 124 DFRTFK-SRAIDRTHLTTQVKVTF---GYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F +R I R + ++ P+ F FT K+D +SF V+L E+
Sbjct: 190 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 245
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 11 KSVHESNVEQ----FINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH 66
K++ E EQ F+ E +I+S+ NH+N+V+ +G L++ ++ E + G L ++
Sbjct: 83 KTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR 142
Query: 67 E-QTDDQLPITWEM--RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
E + P + M L + +++ YL I H DI + N LL +++
Sbjct: 143 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVA 199
Query: 124 DFRTFK-SRAIDRTHLTTQVKVTF---GYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F +R I R + ++ P+ F FT K+D +SF V+L E+
Sbjct: 200 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 255
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 11 KSVHESNVEQ----FINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH 66
K++ E EQ F+ E +I+S+ NH+N+V+ +G L++ ++ E + G L ++
Sbjct: 107 KTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR 166
Query: 67 E-QTDDQLPITWEM--RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
E + P + M L + +++ YL I H DI + N LL +++
Sbjct: 167 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVA 223
Query: 124 DFRTFK-SRAIDRTHLTTQVKVTF---GYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F +R I R + ++ P+ F FT K+D +SF V+L E+
Sbjct: 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 11/230 (4%)
Query: 7 LKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI- 65
+KK + E NEVVI+ +H NVV + L + +V EF+ G+L +
Sbjct: 75 VKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVT 134
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
H + +++ T + + V R LSYLH+ I H DIKS +ILL + K+SDF
Sbjct: 135 HTRMNEEQIAT------VCLSVLRALSYLHNQGVI---HRDIKSDSILLTSDGRIKLSDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F ++ + T ++ P+ + + D++S ++++E+ +P + +
Sbjct: 186 -GFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNE 244
Query: 186 VEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAG 235
S +++ + V + L+L ++P+ + EL G
Sbjct: 245 PPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATAQELLG 294
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 21 FINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE-QTDDQLPITWEM 79
F+ E +I+S+ NH+N+V+ +G L++ ++ E + G L ++ E + P + M
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 80 --RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRT 136
L + +++ YL I H DI + N LL +++ F +R I R
Sbjct: 155 LDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 137 HLTTQVKVTF---GYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ ++ P+ F FT K+D +SF V+L E+
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 21 FINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE-QTDDQLPITWEM 79
F+ E +I+S+ NH+N+V+ +G L++ ++ E + G L ++ E + P + M
Sbjct: 107 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 166
Query: 80 --RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRAIDRT 136
L + +++ YL I H DI + N LL +++ F +R I R
Sbjct: 167 LDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 223
Query: 137 HLTTQ---VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ + ++ P+ F FT K+D +SF V+L E+
Sbjct: 224 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 265
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 9/167 (5%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E NEVVI+ H NVV++ L E ++ EF+ G+L + Q+ + E
Sbjct: 87 ELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIV-----SQVRLNEE 141
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
+ V + L+YLH+ I H DIKS +ILL + K+SDF + D
Sbjct: 142 QIATVCEAVLQALAYLHAQGVI---HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR 198
Query: 139 TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
V + ++ P+ S + + D++S ++++E+ +P + D
Sbjct: 199 KXLVGTPY-WMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD 244
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 82/172 (47%), Gaps = 10/172 (5%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E +E +I E+ IL+ +H +VK+LG ++ EF P G++ I + D L
Sbjct: 49 EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGL- 106
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF----RTFKS 130
+I V ++L L+ + S I H D+K+ N+L+ + +++DF + K+
Sbjct: 107 ----TEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 162
Query: 131 RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIH 182
+ + T + V + + + + K+D++S + L+E+ +P H
Sbjct: 163 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH 214
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQL 73
E I E+ ++ ++ H N+V++ + TE L LV+EF+ N L +Y+ +T
Sbjct: 44 EGTPSTAIREISLMKELKHENIVRLYDV-IHTENKLTLVFEFMDN-DLKKYMDSRTVGNT 101
Query: 74 PITWEMRL--RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSR 131
P E+ L ++ + L++ H I H D+K N+L+ + Q K+ DF ++
Sbjct: 102 PRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAF 158
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKPI 181
I +++V VT Y P S+ ++ D++S +L E+ KP+
Sbjct: 159 GIPVNTFSSEV-VTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPL 208
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 82/172 (47%), Gaps = 10/172 (5%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E +E +I E+ IL+ +H +VK+LG ++ EF P G++ I + D L
Sbjct: 57 EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGL- 114
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF----RTFKS 130
+I V ++L L+ + S I H D+K+ N+L+ + +++DF + K+
Sbjct: 115 ----TEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 170
Query: 131 RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIH 182
+ + T + V + + + + K+D++S + L+E+ +P H
Sbjct: 171 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH 222
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 4 LWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQ 63
L +L KS+ E Q E+ I S + H N++++ + + L+ EF P G LY+
Sbjct: 45 LKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYK 104
Query: 64 YI--HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
+ H + D+Q T+ E++ L Y H I H DIK N+L+ K + K
Sbjct: 105 ELQKHGRFDEQRSATF------MEELADALHYCHERKVI---HRDIKPENLLMGYKGELK 155
Query: 122 ISDFR-TFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
I+DF + + ++ R + T Y+ P+ EK D++ V+ E
Sbjct: 156 IADFGWSVHAPSLRRRXMCG----TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEF 206
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 4 LWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQ 63
L +L KS+ E Q E+ I S + H N++++ + + L+ EF P G LY+
Sbjct: 44 LKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYK 103
Query: 64 YI--HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
+ H + D+Q T+ E++ L Y H I H DIK N+L+ K + K
Sbjct: 104 ELQKHGRFDEQRSATF------MEELADALHYCHERKVI---HRDIKPENLLMGYKGELK 154
Query: 122 ISDFR-TFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
I+DF + + ++ R + T Y+ P+ EK D++ V+ E
Sbjct: 155 IADFGWSVHAPSLRRRXMCG----TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEF 205
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 4 LWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQ 63
L +L KS+ E Q E+ I S + H N++++ + + L+ EF P G LY+
Sbjct: 44 LKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYK 103
Query: 64 YI--HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
+ H + D+Q T+ E++ L Y H I H DIK N+L+ K + K
Sbjct: 104 ELQKHGRFDEQRSATF------MEELADALHYCHERKVI---HRDIKPENLLMGYKGELK 154
Query: 122 ISDFR-TFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
I+DF + + ++ R + T Y+ P+ EK D++ V+ E
Sbjct: 155 IADFGWSVHAPSLRRRXMCG----TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEF 205
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 104/240 (43%), Gaps = 28/240 (11%)
Query: 16 SNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH-------- 66
S E ++E+ +++Q+ H N+V +LG C + L++E+ G L Y+
Sbjct: 90 SEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSE 149
Query: 67 -----------EQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLV 115
E+ +D +T+E L +V++ + +L + + H D+ + N+L+
Sbjct: 150 DEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCV---HRDLAARNVLVT 206
Query: 116 DKYQAKISDFRTFKSRAIDRTHLT-TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE 174
KI DF + D ++ ++ ++ P+ +T KSDV+S+ ++L E
Sbjct: 207 HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWE 266
Query: 175 LN--WTKPIHLVDVEEN--RSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVT 230
+ P + V+ N + + F + ++ + C + +K+P+ +T
Sbjct: 267 IFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLT 326
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 11 KSVHESNVEQ----FINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH 66
K++ E EQ F+ E +I+S+ NH+N+V+ +G L++ ++ E + G L ++
Sbjct: 67 KTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR 126
Query: 67 E-QTDDQLPITWEM--RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
E + P + M L + +++ YL I H DI + N LL +++
Sbjct: 127 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVA 183
Query: 124 DFRTFK-SRAIDRTHLTTQVKVTF---GYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F ++ I R + ++ P+ F FT K+D +SF V+L E+
Sbjct: 184 KIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 23/171 (13%)
Query: 17 NVEQFINEVVILSQINHRNVVKI------LGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
N E++ E+ I+ ++NH NVV L ++PLL E+ G L +Y+++ +
Sbjct: 55 NRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFEN 114
Query: 71 ----DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA---KIS 123
+ PI + ++S L YLH I H D+K NI+L Q KI
Sbjct: 115 CCGLKEGPIR-----TLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKII 166
Query: 124 DFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE 174
D K +D+ L T+ T Y+ P+ ++T D +SF + E
Sbjct: 167 DLGYAKE--LDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFE 215
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 23/171 (13%)
Query: 17 NVEQFINEVVILSQINHRNVVKI------LGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
N E++ E+ I+ ++NH NVV L ++PLL E+ G L +Y+++ +
Sbjct: 56 NRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFEN 115
Query: 71 ----DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA---KIS 123
+ PI + ++S L YLH I H D+K NI+L Q KI
Sbjct: 116 CCGLKEGPIR-----TLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKII 167
Query: 124 DFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE 174
D K +D+ L T+ T Y+ P+ ++T D +SF + E
Sbjct: 168 DLGYAKE--LDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFE 216
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 10/172 (5%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L+K + E+ V E ++S+++H VK+ C + E + NG L +YI
Sbjct: 69 ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYI 128
Query: 66 HE-QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+ + D+ + T E+ L YLH I H D+K NILL + +I+D
Sbjct: 129 RKIGSFDETCTRF-----YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 180
Query: 125 FRTFKSRAIDRTHLTTQVKV-TFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F T K + + V T YV P+ + SD+++ ++ +L
Sbjct: 181 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 232
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 19/179 (10%)
Query: 8 KKSKSVHESNV--EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEF-IPNGSLYQY 64
K S S +SN + I EV L ++ H N ++ GC L LV E+ + + S
Sbjct: 86 KMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLE 145
Query: 65 IHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+H++ ++ I +T + L+YLHS I H D+K+ NILL + K+ D
Sbjct: 146 VHKKPLQEVEIA-----AVTHGALQGLAYLHSHNMI---HRDVKAGNILLSEPGLVKLGD 197
Query: 125 FRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRS---SQFTEKSDVYSFSVVLVELNWTKP 180
F + A + T ++ P+ + Q+ K DV+S + +EL KP
Sbjct: 198 FGSASIMAPANXFVGTPY-----WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 251
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 29/180 (16%)
Query: 11 KSVHESNVEQ---FINEVVILSQINHRNVVKILGCCLETEVP--LLVYEFIPNGSLYQYI 65
K + S +Q F E+ IL ++ +VK G P LV E++P+G L ++
Sbjct: 42 KQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFL 101
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSY-------LHSVASIPIYHLDIKSANILLVDKY 118
R R ++ SR+L Y + + S H D+ + NIL+ +
Sbjct: 102 Q-------------RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA 148
Query: 119 QAKISDFRTFKSRAIDRTHLTTQ---VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
KI+DF K +D+ + F Y P+ + F+ +SDV+SF VVL EL
Sbjct: 149 HVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYA-PESLSDNIFSRQSDVWSFGVVLYEL 207
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 19/179 (10%)
Query: 8 KKSKSVHESNV--EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEF-IPNGSLYQY 64
K S S +SN + I EV L ++ H N ++ GC L LV E+ + + S
Sbjct: 47 KMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLE 106
Query: 65 IHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+H++ ++ I +T + L+YLHS I H D+K+ NILL + K+ D
Sbjct: 107 VHKKPLQEVEIA-----AVTHGALQGLAYLHSHNMI---HRDVKAGNILLSEPGLVKLGD 158
Query: 125 FRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRS---SQFTEKSDVYSFSVVLVELNWTKP 180
F + A + T ++ P+ + Q+ K DV+S + +EL KP
Sbjct: 159 FGSASIMAPANXFVGTPY-----WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 212
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 78/189 (41%), Gaps = 35/189 (18%)
Query: 15 ESNVEQFINEVVILSQINH-------------RNVVKILGCCLETEVPLLVYEFIPNGSL 61
E + ++EV++L+ +NH RN VK + + + E+ N +L
Sbjct: 43 EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTL 102
Query: 62 YQYIH-EQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA 120
Y IH E + Q W R+ ++ LSY+HS I H D+K NI + +
Sbjct: 103 YDLIHSENLNQQRDEYW----RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNV 155
Query: 121 KISDFRTFKS--RAID------------RTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVY 166
KI DF K+ R++D +LT+ + + + EK D+Y
Sbjct: 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMY 215
Query: 167 SFSVVLVEL 175
S ++ E+
Sbjct: 216 SLGIIFFEM 224
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM 79
Q I E+ +L + N +V G + E + GSL Q + + I ++
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQI 105
Query: 80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLT 139
++++ V + L+YL I H D+K +NIL+ + + K+ DF + ID +
Sbjct: 106 LGKVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDF-GVSGQLIDS--MA 160
Query: 140 TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTK-PIHLVDV-EENRSLAAYF 196
T Y+ P+ + + ++ +SD++S + LVE+ + PI D E++R A F
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIF 219
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 108/239 (45%), Gaps = 17/239 (7%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
LLK H + E F ++S+++H+++V G C + +LV EF+ GSL Y+
Sbjct: 44 LLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYL 103
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSY-LHSVASIPIYHLDIKSANILLVDKYQAKISD 124
++ + + I W++ EV++ L++ +H + + H ++ + NILL+ + K +
Sbjct: 104 -KKNKNCINILWKL------EVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGN 156
Query: 125 --FRTFKSRAIDRTHLTTQV-KVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVEL--NWT 178
F I T L + + +V P+ + + +D +SF L E+
Sbjct: 157 PPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGD 216
Query: 179 KPIHLVDVEENRSLAAYFSK-EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGI 236
KP+ +D + R L Y + + + A + C++ +P+ + + +L +
Sbjct: 217 KPLSALDSQ--RKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 10/170 (5%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM 79
Q I E+ +L + N +V G + E + GSL Q + + I ++
Sbjct: 112 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQI 167
Query: 80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLT 139
++++ V + L+YL I H D+K +NIL+ + + K+ DF + ID +
Sbjct: 168 LGKVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDF-GVSGQLIDS--MA 222
Query: 140 TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTK-PIHLVDVEE 188
T Y+ P+ + + ++ +SD++S + LVE+ + PI D +E
Sbjct: 223 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 272
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 112/236 (47%), Gaps = 41/236 (17%)
Query: 5 WLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVP--LLVYEFIPNGSLY 62
W +KS+ +E E L +H NV+ +LG C P L+ ++P GSLY
Sbjct: 46 WSTRKSRDFNE--------ECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLY 97
Query: 63 QYIHEQTD---DQLPITWEMRLRITVEVSRVLSYLHSVAS-IPIYHLDIKSANILLVDKY 118
+HE T+ DQ ++ ++++R +++LH++ IP + L+ +S +++ +
Sbjct: 98 NVLHEGTNFVVDQ-----SQAVKFALDMARGMAFLHTLEPLIPRHALNSRS--VMIDEDM 150
Query: 119 QAKIS--DFRTFKSRAIDRTHLTTQVKVTFGYVDPKYF-RSSQFTEK--SDVYSFSVVLV 173
A+IS D + F ++ R + +V P+ + + T + +D++SF+V+L
Sbjct: 151 TARISMADVK-FSFQSPGRMYAP-------AWVAPEALQKKPEDTNRRSADMWSFAVLLW 202
Query: 174 ELNWTKPIHLVDVEENRSLAAYFSKEAEKEEVIT-----FAMVAKRCLNLNGKKQP 224
EL T+ + D+ N + + E + + + + K C+N + K+P
Sbjct: 203 ELV-TREVPFADL-SNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRP 256
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 10/170 (5%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM 79
Q I E+ +L + N +V G + E + GSL Q + + I ++
Sbjct: 77 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQI 132
Query: 80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLT 139
++++ V + L+YL I H D+K +NIL+ + + K+ DF + ID +
Sbjct: 133 LGKVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDF-GVSGQLIDS--MA 187
Query: 140 TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTK-PIHLVDVEE 188
T Y+ P+ + + ++ +SD++S + LVE+ + PI D +E
Sbjct: 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 237
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLY 62
+L +KK + E NEVVI+ H NVV++ L + +V EF+ G+L
Sbjct: 46 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105
Query: 63 QYI-HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
+ H + ++ E + + V + LS LH+ I H DIKS +ILL + K
Sbjct: 106 DIVTHTRMNE------EQIAAVCLAVLQALSVLHAQGVI---HRDIKSDSILLTHDGRVK 156
Query: 122 ISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
+SDF F ++ + T ++ P+ + + D++S ++++E+ +P
Sbjct: 157 LSDF-GFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 214
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 10/170 (5%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM 79
Q I E+ +L + N +V G + E + GSL Q + + I ++
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQI 105
Query: 80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLT 139
++++ V + L+YL I H D+K +NIL+ + + K+ DF + ID +
Sbjct: 106 LGKVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDF-GVSGQLIDS--MA 160
Query: 140 TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTK-PIHLVDVEE 188
T Y+ P+ + + ++ +SD++S + LVE+ + PI D +E
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLY 62
+L +KK + E NEVVI+ H NVV++ L + +V EF+ G+L
Sbjct: 50 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 109
Query: 63 QYI-HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
+ H + ++ E + + V + LS LH+ I H DIKS +ILL + K
Sbjct: 110 DIVTHTRMNE------EQIAAVCLAVLQALSVLHAQGVI---HRDIKSDSILLTHDGRVK 160
Query: 122 ISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
+SDF F ++ + T ++ P+ + + D++S ++++E+ +P
Sbjct: 161 LSDF-GFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 218
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 18/165 (10%)
Query: 24 EVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQ----TDDQLPITWEM 79
E+ + + H+N+V+ LG E + E +P GSL + + D++ I +
Sbjct: 69 EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF-- 126
Query: 80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA--KISDFRTFKSRAIDRTH 137
T ++ L YLH I H DIK N+ L++ Y KISDF T K R
Sbjct: 127 ---YTKQILEGLKYLHDNQ---IVHRDIKGDNV-LINTYSGVLKISDFGTSK-RLAGINP 178
Query: 138 LTTQVKVTFGYVDPKYFRSS--QFTEKSDVYSFSVVLVELNWTKP 180
T T Y+ P+ + + +D++S ++E+ KP
Sbjct: 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKP 223
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 10/170 (5%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM 79
Q I E+ +L + N +V G + E + GSL Q + + I ++
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQI 105
Query: 80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLT 139
++++ V + L+YL I H D+K +NIL+ + + K+ DF + ID +
Sbjct: 106 LGKVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDF-GVSGQLIDS--MA 160
Query: 140 TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTK-PIHLVDVEE 188
T Y+ P+ + + ++ +SD++S + LVE+ + PI D +E
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLY 62
+L +KK + E NEVVI+ H NVV++ L + +V EF+ G+L
Sbjct: 57 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 116
Query: 63 QYI-HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
+ H + ++ E + + V + LS LH+ I H DIKS +ILL + K
Sbjct: 117 DIVTHTRMNE------EQIAAVCLAVLQALSVLHAQGVI---HRDIKSDSILLTHDGRVK 167
Query: 122 ISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
+SDF F ++ + T ++ P+ + + D++S ++++E+ +P
Sbjct: 168 LSDF-GFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 225
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E+F+ E + + Q +H ++VK++G E V ++ E G L ++ + + +
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR---KFSLDLA 491
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
+ ++S L+YL S + H DI + N+L+ K+ DF + +
Sbjct: 492 SLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 548
Query: 139 TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE--LNWTKPIHLV 184
++ K+ ++ P+ +FT SDV+ F V + E ++ KP V
Sbjct: 549 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 596
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLY 62
+L +KK + E NEVVI+ H NVV++ L + +V EF+ G+L
Sbjct: 55 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 114
Query: 63 QYI-HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
+ H + ++ E + + V + LS LH+ I H DIKS +ILL + K
Sbjct: 115 DIVTHTRMNE------EQIAAVCLAVLQALSVLHAQGVI---HRDIKSDSILLTHDGRVK 165
Query: 122 ISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
+SDF F ++ + T ++ P+ + + D++S ++++E+ +P
Sbjct: 166 LSDF-GFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 223
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 18/165 (10%)
Query: 24 EVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQ----TDDQLPITWEM 79
E+ + + H+N+V+ LG E + E +P GSL + + D++ I +
Sbjct: 55 EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF-- 112
Query: 80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA--KISDFRTFKSRAIDRTH 137
T ++ L YLH I H DIK N+ L++ Y KISDF T K R
Sbjct: 113 ---YTKQILEGLKYLHDNQ---IVHRDIKGDNV-LINTYSGVLKISDFGTSK-RLAGINP 164
Query: 138 LTTQVKVTFGYVDPKYFRSS--QFTEKSDVYSFSVVLVELNWTKP 180
T T Y+ P+ + + +D++S ++E+ KP
Sbjct: 165 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKP 209
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLY 62
+L +KK + E NEVVI+ H NVV++ L + +V EF+ G+L
Sbjct: 100 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 159
Query: 63 QYI-HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
+ H + ++ E + + V + LS LH+ I H DIKS +ILL + K
Sbjct: 160 DIVTHTRMNE------EQIAAVCLAVLQALSVLHAQGVI---HRDIKSDSILLTHDGRVK 210
Query: 122 ISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
+SDF F ++ + T ++ P+ + + D++S ++++E+ +P
Sbjct: 211 LSDF-GFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 268
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 10/170 (5%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM 79
Q I E+ +L + N +V G + E + GSL Q + + I ++
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQI 105
Query: 80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLT 139
++++ V + L+YL I H D+K +NIL+ + + K+ DF + ID +
Sbjct: 106 LGKVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDF-GVSGQLIDS--MA 160
Query: 140 TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTK-PIHLVDVEE 188
T Y+ P+ + + ++ +SD++S + LVE+ + PI D +E
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 10/170 (5%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM 79
Q I E+ +L + N +V G + E + GSL Q + + I ++
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQI 105
Query: 80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLT 139
++++ V + L+YL I H D+K +NIL+ + + K+ DF + ID +
Sbjct: 106 LGKVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDF-GVSGQLIDS--MA 160
Query: 140 TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTK-PIHLVDVEE 188
T Y+ P+ + + ++ +SD++S + LVE+ + PI D +E
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 10/181 (5%)
Query: 7 LKKSKSVHESNV-EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+K K+ +V E+F+ E + + Q +H ++VK++G E V ++ E G L ++
Sbjct: 43 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL 101
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
+ + + + ++S L+YL S + H DI + N+L+ K+ DF
Sbjct: 102 QVR---KFSLDLASLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDF 155
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE--LNWTKPIHL 183
+ ++ K+ ++ P+ +FT SDV+ F V + E ++ KP
Sbjct: 156 GLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
Query: 184 V 184
V
Sbjct: 216 V 216
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 10/181 (5%)
Query: 7 LKKSKSVHESNV-EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+K K+ +V E+F+ E + + Q +H ++VK++G E V ++ E G L ++
Sbjct: 48 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL 106
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
+ + + + ++S L+YL S + H DI + N+L+ K+ DF
Sbjct: 107 QVR---KYSLDLASLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDF 160
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE--LNWTKPIHL 183
+ + ++ K+ ++ P+ +FT SDV+ F V + E ++ KP
Sbjct: 161 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 220
Query: 184 V 184
V
Sbjct: 221 V 221
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 11/168 (6%)
Query: 27 ILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITV 85
IL ++NH +VK L +TE L L+ +F+ G L+ + ++ + T E
Sbjct: 79 ILVEVNHPFIVK-LHYAFQTEGKLYLILDFLRGGDLFTRLSKE----VMFTEEDVKFYLA 133
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
E++ L +LHS+ I + D+K NILL ++ K++DF K +ID T
Sbjct: 134 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGT 189
Query: 146 FGYVDPKYFRSSQFTEKSDVYSFSVVLVE-LNWTKPIHLVDVEENRSL 192
Y+ P+ T+ +D +SF V++ E L T P D +E ++
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 237
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 11/168 (6%)
Query: 27 ILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITV 85
IL ++NH +VK L +TE L L+ +F+ G L+ + ++ + T E
Sbjct: 80 ILVEVNHPFIVK-LHYAFQTEGKLYLILDFLRGGDLFTRLSKE----VMFTEEDVKFYLA 134
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
E++ L +LHS+ I + D+K NILL ++ K++DF K +ID T
Sbjct: 135 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGT 190
Query: 146 FGYVDPKYFRSSQFTEKSDVYSFSVVLVE-LNWTKPIHLVDVEENRSL 192
Y+ P+ T+ +D +SF V++ E L T P D +E ++
Sbjct: 191 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 238
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 10/181 (5%)
Query: 7 LKKSKSVHESNV-EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+K K+ +V E+F+ E + + Q +H ++VK++G E V ++ E G L ++
Sbjct: 46 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL 104
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
+ + + + ++S L+YL S + H DI + N+L+ K+ DF
Sbjct: 105 QVR---KYSLDLASLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDF 158
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE--LNWTKPIHL 183
+ + ++ K+ ++ P+ +FT SDV+ F V + E ++ KP
Sbjct: 159 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 218
Query: 184 V 184
V
Sbjct: 219 V 219
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 10/181 (5%)
Query: 7 LKKSKSVHESNV-EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+K K+ +V E+F+ E + + Q +H ++VK++G E V ++ E G L ++
Sbjct: 43 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL 101
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
+ + + + ++S L+YL S + H DI + N+L+ K+ DF
Sbjct: 102 QVR---KFSLDLASLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSATDCVKLGDF 155
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE--LNWTKPIHL 183
+ + ++ K+ ++ P+ +FT SDV+ F V + E ++ KP
Sbjct: 156 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
Query: 184 V 184
V
Sbjct: 216 V 216
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 10/181 (5%)
Query: 7 LKKSKSVHESNV-EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+K K+ +V E+F+ E + + Q +H ++VK++G E V ++ E G L ++
Sbjct: 45 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL 103
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
+ + + + ++S L+YL S + H DI + N+L+ K+ DF
Sbjct: 104 QVR---KYSLDLASLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDF 157
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE--LNWTKPIHL 183
+ + ++ K+ ++ P+ +FT SDV+ F V + E ++ KP
Sbjct: 158 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 217
Query: 184 V 184
V
Sbjct: 218 V 218
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 10/181 (5%)
Query: 7 LKKSKSVHESNV-EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+K K+ +V E+F+ E + + Q +H ++VK++G E V ++ E G L ++
Sbjct: 40 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL 98
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
+ + + + ++S L+YL S + H DI + N+L+ K+ DF
Sbjct: 99 QVR---KYSLDLASLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDF 152
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE--LNWTKPIHL 183
+ + ++ K+ ++ P+ +FT SDV+ F V + E ++ KP
Sbjct: 153 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 212
Query: 184 V 184
V
Sbjct: 213 V 213
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 11/168 (6%)
Query: 27 ILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITV 85
IL ++NH +VK L +TE L L+ +F+ G L+ + ++ + T E
Sbjct: 79 ILVEVNHPFIVK-LHYAFQTEGKLYLILDFLRGGDLFTRLSKE----VMFTEEDVKFYLA 133
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
E++ L +LHS+ I + D+K NILL ++ K++DF K +ID T
Sbjct: 134 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGT 189
Query: 146 FGYVDPKYFRSSQFTEKSDVYSFSVVLVE-LNWTKPIHLVDVEENRSL 192
Y+ P+ T+ +D +SF V++ E L T P D +E ++
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 237
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 10/181 (5%)
Query: 7 LKKSKSVHESNV-EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+K K+ +V E+F+ E + + Q +H ++VK++G E V ++ E G L ++
Sbjct: 71 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL 129
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
+ + + + ++S L+YL S + H DI + N+L+ K+ DF
Sbjct: 130 QVR---KYSLDLASLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDF 183
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE--LNWTKPIHL 183
+ + ++ K+ ++ P+ +FT SDV+ F V + E ++ KP
Sbjct: 184 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 243
Query: 184 V 184
V
Sbjct: 244 V 244
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 100/238 (42%), Gaps = 20/238 (8%)
Query: 7 LKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLL-VYEFIPNGSLYQYI 65
LKK + + +VE + E +LS + + C +T+ L V E++ G L +I
Sbjct: 51 LKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI 110
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
Q+ + ++ R T + ++ L + S I + D+K NILL KI+DF
Sbjct: 111 --QSCHKFDLS-----RATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADF 163
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE-LNWTKPIHLV 184
K + T + T Y+ P+ ++ D +SF V+L E L P H
Sbjct: 164 GMCKENMLGDAK-TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 222
Query: 185 DVEE--------NRSLAAYFSKEAEKEEVITFAMVAKRCLNLNG--KKQPTMKEVTLE 232
D EE N + KEA+ V F ++ L + G ++ P +E+ E
Sbjct: 223 DEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWE 280
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 10/181 (5%)
Query: 7 LKKSKSVHESNV-EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+K K+ +V E+F+ E + + Q +H ++VK++G E V ++ E G L ++
Sbjct: 43 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL 101
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
+ + + + ++S L+YL S + H DI + N+L+ K+ DF
Sbjct: 102 QVR---KYSLDLASLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDF 155
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE--LNWTKPIHL 183
+ + ++ K+ ++ P+ +FT SDV+ F V + E ++ KP
Sbjct: 156 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
Query: 184 V 184
V
Sbjct: 216 V 216
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 82/176 (46%), Gaps = 24/176 (13%)
Query: 21 FINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL------- 73
F E ++++ ++ N+VK+LG C + L++E++ G L +++ + +
Sbjct: 97 FQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSD 156
Query: 74 -------------PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA 120
P++ +L I +V+ ++YL + H D+ + N L+ +
Sbjct: 157 LSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFV---HRDLATRNCLVGENMVV 213
Query: 121 KISDFRTFKS-RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
KI+DF ++ + D + ++ P+ +++T +SDV+++ VVL E+
Sbjct: 214 KIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 10/181 (5%)
Query: 7 LKKSKSVHESNV-EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+K K+ +V E+F+ E + + Q +H ++VK++G E V ++ E G L ++
Sbjct: 43 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL 101
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
+ + + + ++S L+YL S + H DI + N+L+ K+ DF
Sbjct: 102 QVR---KYSLDLASLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDF 155
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE--LNWTKPIHL 183
+ + ++ K+ ++ P+ +FT SDV+ F V + E ++ KP
Sbjct: 156 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
Query: 184 V 184
V
Sbjct: 216 V 216
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 11/170 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+LKK V VE +E ++LS + H ++++ G + + ++ ++I G L+ +
Sbjct: 38 VLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL 97
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
+ P+ EV L YLHS I + D+K NILL KI+DF
Sbjct: 98 RKSQRFPNPVA----KFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDF 150
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F D T+ T Y+ P+ + + + D +SF +++ E+
Sbjct: 151 -GFAKYVPDVTYXLCG---TPDYIAPEVVSTKPYNKSIDWWSFGILIYEM 196
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM 79
Q I E+ +L + N +V G + E + GSL Q + + I ++
Sbjct: 53 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQI 108
Query: 80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLT 139
++++ V + L+YL I H D+K +NIL+ + + K+ DF + ID +
Sbjct: 109 LGKVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDF-GVSGQLIDE--MA 163
Query: 140 TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ T Y+ P+ + + ++ +SD++S + LVE+
Sbjct: 164 NEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 199
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 11/174 (6%)
Query: 3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLY 62
+L +KK + E NEVVI+ H NVV++ L + +V EF+ G+L
Sbjct: 177 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 236
Query: 63 QYI-HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
+ H + ++ E + + V + LS LH+ I H DIKS +ILL + K
Sbjct: 237 DIVTHTRMNE------EQIAAVCLAVLQALSVLHAQGVI---HRDIKSDSILLTHDGRVK 287
Query: 122 ISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+SDF F ++ + T ++ P+ + + D++S ++++E+
Sbjct: 288 LSDF-GFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 340
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 107/236 (45%), Gaps = 17/236 (7%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
LLK H + E F ++S+++H+++V G C+ + +LV EF+ GSL Y+
Sbjct: 44 LLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL 103
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVL-SYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
++ + + I W++ EV++ L + +H + + H ++ + NILL+ + K +
Sbjct: 104 -KKNKNCINILWKL------EVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGN 156
Query: 125 --FRTFKSRAIDRTHLTTQV-KVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVEL--NWT 178
F I T L + + +V P+ + + +D +SF L E+
Sbjct: 157 PPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGD 216
Query: 179 KPIHLVDVEENRSLAAYFSK-EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLEL 233
KP+ +D + R L Y + + + A + C++ +P+ + + +L
Sbjct: 217 KPLSALDSQ--RKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 18/163 (11%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQT-----DDQL 73
E+ EV +L+ + H N+V+ E +V ++ G L++ I+ Q +DQ+
Sbjct: 68 EESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI 127
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI 133
+ W V++ L ++H I H DIKS NI L ++ DF +R +
Sbjct: 128 -LDW------FVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGI--ARVL 175
Query: 134 DRT-HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ T L T Y+ P+ + + KSD+++ VL EL
Sbjct: 176 NSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E+F+ E + + Q +H ++VK++G E V ++ E G L ++ + + +
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR---KFSLDLA 491
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
+ ++S L+YL S + H DI + N+L+ K+ DF + +
Sbjct: 492 SLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYK 548
Query: 139 TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE--LNWTKPIHLV 184
++ K+ ++ P+ +FT SDV+ F V + E ++ KP V
Sbjct: 549 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 596
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 10/172 (5%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E +E ++ E+ IL+ +H N+VK+L ++ EF G++ + E + P
Sbjct: 75 EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL---ERP 131
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF--RTFKSRA 132
+T + + L+YLH I H D+K+ NIL K++DF +R
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT 188
Query: 133 IDR--THLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIH 182
I R + + T + V + + + K+DV+S + L+E+ +P H
Sbjct: 189 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH 240
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 99/238 (41%), Gaps = 20/238 (8%)
Query: 7 LKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLL-VYEFIPNGSLYQYI 65
LKK + + +VE + E +LS + + C +T+ L V E++ G L +I
Sbjct: 50 LKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI 109
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
Q+ + ++ R T + ++ L + S I + D+K NILL KI+DF
Sbjct: 110 --QSCHKFDLS-----RATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADF 162
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVE-LNWTKPIHLV 184
K + T T Y+ P+ ++ D +SF V+L E L P H
Sbjct: 163 GMCKENMLGDAK-TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 221
Query: 185 DVEE--------NRSLAAYFSKEAEKEEVITFAMVAKRCLNLNG--KKQPTMKEVTLE 232
D EE N + KEA+ V F ++ L + G ++ P +E+ E
Sbjct: 222 DEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWE 279
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 24/191 (12%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVP------LLVYEFIPNGSLYQYIHEQ 68
E ++Q IN + S +HRN+ G ++ P LV EF GS+ I
Sbjct: 64 EEEIKQEINMLKKYS--HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT 121
Query: 69 TDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTF 128
+ L W I E+ R LS+LH I H DIK N+LL + + K+ DF
Sbjct: 122 KGNTLKEEW--IAYICREILRGLSHLHQHKVI---HRDIKGQNVLLTENAEVKLVDFGV- 175
Query: 129 KSRAIDRT--HLTTQVKVTFGYVDPKYFRSSQFTE-----KSDVYSFSVVLVELNWTKPI 181
S +DRT T + + ++ P+ + + KSD++S + +E+ P
Sbjct: 176 -SAQLDRTVGRRNTFIGTPY-WMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
Query: 182 HLVDVEENRSL 192
L D+ R+L
Sbjct: 234 -LCDMHPMRAL 243
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 29/180 (16%)
Query: 11 KSVHESNVEQ---FINEVVILSQINHRNVVKILGCCLET--EVPLLVYEFIPNGSLYQYI 65
K + S +Q F E+ IL ++ +VK G + LV E++P+G L ++
Sbjct: 45 KQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL 104
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSY-------LHSVASIPIYHLDIKSANILLVDKY 118
R R ++ SR+L Y + + S H D+ + NIL+ +
Sbjct: 105 Q-------------RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA 151
Query: 119 QAKISDFRTFKSRAIDRTHLTTQ---VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
KI+DF K +D+ + + F Y P+ + F+ +SDV+SF VVL EL
Sbjct: 152 HVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PESLSDNIFSRQSDVWSFGVVLYEL 210
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 29/180 (16%)
Query: 11 KSVHESNVEQ---FINEVVILSQINHRNVVKILGCCLET--EVPLLVYEFIPNGSLYQYI 65
K + S +Q F E+ IL ++ +VK G + LV E++P+G L ++
Sbjct: 46 KQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL 105
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSY-------LHSVASIPIYHLDIKSANILLVDKY 118
R R ++ SR+L Y + + S H D+ + NIL+ +
Sbjct: 106 Q-------------RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA 152
Query: 119 QAKISDFRTFKSRAIDRTHLTTQ---VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
KI+DF K +D+ + + F Y P+ + F+ +SDV+SF VVL EL
Sbjct: 153 HVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PESLSDNIFSRQSDVWSFGVVLYEL 211
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 29/180 (16%)
Query: 11 KSVHESNVEQ---FINEVVILSQINHRNVVKILGCCLET--EVPLLVYEFIPNGSLYQYI 65
K + S +Q F E+ IL ++ +VK G + LV E++P+G L ++
Sbjct: 58 KQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL 117
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSY-------LHSVASIPIYHLDIKSANILLVDKY 118
R R ++ SR+L Y + + S H D+ + NIL+ +
Sbjct: 118 Q-------------RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA 164
Query: 119 QAKISDFRTFKSRAIDRTHLTTQ---VKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
KI+DF K +D+ + + F Y P+ + F+ +SDV+SF VVL EL
Sbjct: 165 HVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PESLSDNIFSRQSDVWSFGVVLYEL 223
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 10/172 (5%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E +E ++ E+ IL+ +H N+VK+L ++ EF G++ + E + P
Sbjct: 75 EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL---ERP 131
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF--RTFKSRA 132
+T + + L+YLH I H D+K+ NIL K++DF +R
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRX 188
Query: 133 IDR--THLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIH 182
I R + + T + V + + + K+DV+S + L+E+ +P H
Sbjct: 189 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH 240
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 22/125 (17%)
Query: 16 SNVEQFINEVVI--LSQINHRNVVK-ILGCCLETEVP----LLVYEFIPNGSLYQYIHEQ 68
+N + FINE I + + H N+ + I+G T LLV E+ PNGSL +Y+
Sbjct: 47 ANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH 106
Query: 69 TDDQLPITWEMRLRITVEVSRVLSYLHSVASIP--------IYHLDIKSANILLVDKYQA 120
T D W R+ V+R L+YLH+ +P I H D+ S N+L+ +
Sbjct: 107 TSD-----WVSSCRLAHSVTRGLAYLHT--ELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159
Query: 121 KISDF 125
ISDF
Sbjct: 160 VISDF 164
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 10/157 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL 81
I E+ +L Q+NH NV+K +E +V E G L + I + I
Sbjct: 80 IKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW 139
Query: 82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSRAIDRTHL 138
+ V++ L ++HS + H DIK AN+ + K+ D R F S+ L
Sbjct: 140 KYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL 196
Query: 139 TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
T Y+ P+ + + KSD++S +L E+
Sbjct: 197 VG----TPYYMSPERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 78/179 (43%), Gaps = 23/179 (12%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E +E ++ E+ IL+ +H N+VK+L ++ EF G++ + E + P
Sbjct: 48 EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL---ERP 104
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAID 134
+T + + L+YLH I H D+K+ NIL K++DF +
Sbjct: 105 LTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADF------GVS 155
Query: 135 RTHLTTQVKVTFGYVDPKYFRSSQ-----------FTEKSDVYSFSVVLVELNWTKPIH 182
+ T ++ ++ Y+ + + + K+DV+S + L+E+ +P H
Sbjct: 156 AKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH 214
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 10/172 (5%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP 74
E +E ++ E+ IL+ +H N+VK+L ++ EF G++ + E + P
Sbjct: 75 EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL---ERP 131
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF--RTFKSRA 132
+T + + L+YLH I H D+K+ NIL K++DF +R
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRX 188
Query: 133 IDRTH--LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIH 182
I R + T + V + + + K+DV+S + L+E+ +P H
Sbjct: 189 IQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH 240
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 9/156 (5%)
Query: 20 QFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM 79
Q I E+ +L + N +V G + E + GSL Q + + I ++
Sbjct: 69 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQI 124
Query: 80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLT 139
++++ V + L+YL I H D+K +NIL+ + + K+ DF + ID +
Sbjct: 125 LGKVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDF-GVSGQLIDS--MA 179
Query: 140 TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
T Y+ P+ + + ++ +SD++S + LVE+
Sbjct: 180 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 215
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 76/176 (43%), Gaps = 20/176 (11%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
+E ++ F EV+ Q H NVV +G C+ ++ +LY + D ++
Sbjct: 69 NEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVR---DAKI 125
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK-SRA 132
+ +I E+ + + YLH+ I H D+KS N+ D + I+DF F S
Sbjct: 126 VLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNV-FYDNGKVVITDFGLFSISGV 181
Query: 133 IDRTHLTTQVKVTFGY---VDPKYFRSSQ---------FTEKSDVYSFSVVLVELN 176
+ ++++ G+ + P+ R F++ SDV++ + EL+
Sbjct: 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELH 237
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 23/235 (9%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGS---LYQYIHEQTDD 71
++++++ + E+ +SQ +H N+V + + LV + + GS + ++I + +
Sbjct: 49 QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEH 108
Query: 72 QLPITWEMRLR-ITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS 130
+ + E + I EV L YLH I H D+K+ NILL + +I+DF
Sbjct: 109 KSGVLDESTIATILREVLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAF 165
Query: 131 RAIDRTHLTTQVKVTF----GYVDPKYFRSSQ-FTEKSDVYSFSVVLVEL-NWTKPIH-- 182
A +V+ TF ++ P+ + + K+D++SF + +EL P H
Sbjct: 166 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKY 225
Query: 183 -------LVDVEENRSL-AAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
L + SL KE K+ +F + CL + +K+PT E+
Sbjct: 226 PPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 280
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L+K + E+ V E ++S+++H VK+ + E + NG L +YI
Sbjct: 62 ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 121
Query: 66 HE-QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+ + D+ + T E+ L YLH I H D+K NILL + +I+D
Sbjct: 122 RKIGSFDETCTRF-----YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 173
Query: 125 FRTFKSRAIDRTHLTTQVKV-TFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F T K + + V T YV P+ + SD+++ ++ +L
Sbjct: 174 FGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 225
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 10/172 (5%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L+K + E+ V E ++S+++H VK+ + E + NG L +YI
Sbjct: 64 ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYI 123
Query: 66 HE-QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+ + D+ + T E+ L YLH I H D+K NILL + +I+D
Sbjct: 124 RKIGSFDETCTRF-----YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 175
Query: 125 FRTFKSRAIDRTHLTTQVKV-TFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F T K + + V T YV P+ ++ SD+++ ++ +L
Sbjct: 176 FGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQL 227
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 26/245 (10%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L+K + E+ V E ++S+++H VK+ + E + NG L +YI
Sbjct: 67 ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 126
Query: 66 HE-QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+ + D+ + T E+ L YLH I H D+K NILL + +I+D
Sbjct: 127 RKIGSFDETCTRF-----YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 178
Query: 125 FRTFKSRAIDRTHLTTQVKV-TFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHL 183
F T K + + V T YV P+ + SD+++ ++ +L P
Sbjct: 179 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 238
Query: 184 VDVE----------ENRSLAAYFSKEAEKEEVITFAMVAKR--CLNLNG----KKQPTMK 227
E E AA+F K + E + KR C + G K P +
Sbjct: 239 AGNEYLIFQKIIKLEYDFPAAFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 298
Query: 228 EVTLE 232
VT E
Sbjct: 299 SVTWE 303
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 23/235 (9%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGS---LYQYIHEQTDD 71
++++++ + E+ +SQ +H N+V + + LV + + GS + ++I + +
Sbjct: 54 QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEH 113
Query: 72 QLPITWEMRLR-ITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS 130
+ + E + I EV L YLH I H D+K+ NILL + +I+DF
Sbjct: 114 KSGVLDESTIATILREVLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAF 170
Query: 131 RAIDRTHLTTQVKVTF----GYVDPKYFRSSQ-FTEKSDVYSFSVVLVEL-NWTKPIH-- 182
A +V+ TF ++ P+ + + K+D++SF + +EL P H
Sbjct: 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKY 230
Query: 183 -------LVDVEENRSL-AAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
L + SL KE K+ +F + CL + +K+PT E+
Sbjct: 231 PPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 285
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L+K + E+ V E ++S+++H VK+ + E + NG L +YI
Sbjct: 64 ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 123
Query: 66 HE-QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+ + D+ + T E+ L YLH I H D+K NILL + +I+D
Sbjct: 124 RKIGSFDETCTRF-----YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 175
Query: 125 FRTFKSRAIDRTHLTTQVKV-TFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F T K + + V T YV P+ + SD+++ ++ +L
Sbjct: 176 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQL 227
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 22/161 (13%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E+ NE+ +++Q++H N++++ +LV E++ G L+ I D+ +T
Sbjct: 131 EEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRI---IDESYNLTEL 187
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLV--DKYQAKISDF---RTFKSRAI 133
+ ++ + ++H + I HLD+K NIL V D Q KI DF R +K R
Sbjct: 188 DTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR-- 242
Query: 134 DRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVV 171
++KV FG ++ P+ + +D++S V+
Sbjct: 243 ------EKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVI 277
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L+K + E+ V E ++S+++H VK+ + E + NG L +YI
Sbjct: 64 ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 123
Query: 66 HE-QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+ + D+ + T E+ L YLH I H D+K NILL + +I+D
Sbjct: 124 RKIGSFDETCTRF-----YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 175
Query: 125 FRTFKSRAIDRTHLTTQVKV-TFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F T K + + V T YV P+ + SD+++ ++ +L
Sbjct: 176 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 227
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 22/221 (9%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
LL K + + S+ F E I++ N VV++ + + +V E++P G L +
Sbjct: 107 LLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDL---V 163
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
+ ++ +P W T EV L +HS+ I H D+K N+LL K++DF
Sbjct: 164 NLMSNYDVPEKWAKFY--TAEVVLALDAIHSMGLI---HRDVKPDNMLLDKHGHLKLADF 218
Query: 126 RT-FKSRAIDRTHLTTQVKVTFGYVDPKYFRS----SQFTEKSDVYSFSVVLVELNWTKP 180
T K H T V T Y+ P+ +S + + D +S V L E+
Sbjct: 219 GTCMKMDETGMVHCDTAVG-TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDT 277
Query: 181 IHLVDVEENRSLAAYFSKEAEKEEVITF---AMVAKRCLNL 218
D SL +SK + + + F A ++K NL
Sbjct: 278 PFYAD-----SLVGTYSKIMDHKNSLCFPEDAEISKHAKNL 313
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L+K + E+ V E ++S+++H VK+ + E + NG L +YI
Sbjct: 64 ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 123
Query: 66 HE-QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+ + D+ + T E+ L YLH I H D+K NILL + +I+D
Sbjct: 124 RKIGSFDETCTRF-----YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 175
Query: 125 FRTFKSRAIDRTHLTTQVKV-TFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F T K + + V T YV P+ + SD+++ ++ +L
Sbjct: 176 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 227
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L+K + E+ V E ++S+++H VK+ + E + NG L +YI
Sbjct: 62 ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 121
Query: 66 HE-QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+ + D+ + T E+ L YLH I H D+K NILL + +I+D
Sbjct: 122 RKIGSFDETCTRF-----YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 173
Query: 125 FRTFKSRAIDRTHLTTQVKV-TFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F T K + + V T YV P+ + SD+++ ++ +L
Sbjct: 174 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 225
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L+K + E+ V E ++S+++H VK+ + E + NG L +YI
Sbjct: 40 ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 99
Query: 66 HE-QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+ + D+ + T E+ L YLH I H D+K NILL + +I+D
Sbjct: 100 RKIGSFDETCTRF-----YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 151
Query: 125 FRTFKSRAIDRTHLTTQVKV-TFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F T K + + V T YV P+ + SD+++ ++ +L
Sbjct: 152 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 203
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L+K + E+ V E ++S+++H VK+ + E + NG L +YI
Sbjct: 65 ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 124
Query: 66 HE-QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+ + D+ + T E+ L YLH I H D+K NILL + +I+D
Sbjct: 125 RKIGSFDETCTRF-----YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 176
Query: 125 FRTFKSRAIDRTHLTTQVKV-TFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F T K + + V T YV P+ + SD+++ ++ +L
Sbjct: 177 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 228
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L+K + E+ V E ++S+++H VK+ + E + NG L +YI
Sbjct: 41 ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 100
Query: 66 HE-QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+ + D+ + T E+ L YLH I H D+K NILL + +I+D
Sbjct: 101 RKIGSFDETCTRF-----YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 152
Query: 125 FRTFKSRAIDRTHLTTQVKV-TFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F T K + + V T YV P+ + SD+++ ++ +L
Sbjct: 153 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 204
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L+K + E+ V E ++S+++H VK+ + E + NG L +YI
Sbjct: 39 ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 98
Query: 66 HE-QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+ + D+ + T E+ L YLH I H D+K NILL + +I+D
Sbjct: 99 RKIGSFDETCTRF-----YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 150
Query: 125 FRTFKSRAIDRTHLTTQVKV-TFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F T K + + V T YV P+ + SD+++ ++ +L
Sbjct: 151 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 202
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L+K + E+ V E ++S+++H VK+ + E + NG L +YI
Sbjct: 64 ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 123
Query: 66 HE-QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+ + D+ + T E+ L YLH I H D+K NILL + +I+D
Sbjct: 124 RKIGSFDETCTRF-----YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 175
Query: 125 FRTFKSRAIDRTHLTTQVKV-TFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F T K + + V T YV P+ + SD+++ ++ +L
Sbjct: 176 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 227
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 18/169 (10%)
Query: 22 INEVVILSQIN---HRNVVKILGCCL------ETEVPLLVYEFIPNGSLYQYIHEQTDDQ 72
I EV +L + H NVV++ C ET++ LV+E + + L Y+ + +
Sbjct: 59 IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL-TLVFEHV-DQDLTTYLDKVPEPG 116
Query: 73 LPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRA 132
+P E + ++ R L +LHS + H D+K NIL+ Q K++DF +R
Sbjct: 117 VPT--ETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGL--ARI 169
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPI 181
T V VT Y P+ S + D++S + E+ KP+
Sbjct: 170 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 218
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L+K + E+ V E ++S+++H VK+ + E + NG L +YI
Sbjct: 62 ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 121
Query: 66 HE-QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+ + D+ + T E+ L YLH I H D+K NILL + +I+D
Sbjct: 122 RKIGSFDETCTRF-----YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 173
Query: 125 FRTFKSRAIDRTHLTTQVKV-TFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F T K + + V T YV P+ + SD+++ ++ +L
Sbjct: 174 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 225
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L+K + E+ V E ++S+++H VK+ + E + NG L +YI
Sbjct: 62 ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 121
Query: 66 HE-QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+ + D+ + T E+ L YLH I H D+K NILL + +I+D
Sbjct: 122 RKIGSFDETCTRF-----YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 173
Query: 125 FRTFKSRAIDRTHLTTQVKV-TFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F T K + + V T YV P+ + SD+++ ++ +L
Sbjct: 174 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 225
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 80/168 (47%), Gaps = 11/168 (6%)
Query: 27 ILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITV 85
IL+ +NH VVK L +TE L L+ +F+ G L+ + ++ + T E
Sbjct: 83 ILADVNHPFVVK-LHYAFQTEGKLYLILDFLRGGDLFTRLSKE----VMFTEEDVKFYLA 137
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
E++ L +LHS+ I + D+K NILL ++ K++DF K AID T
Sbjct: 138 ELALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKE-AIDHEKKAYSFCGT 193
Query: 146 FGYVDPKYFRSSQFTEKSDVYSFSVVLVE-LNWTKPIHLVDVEENRSL 192
Y+ P+ + +D +S+ V++ E L + P D +E +L
Sbjct: 194 VEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTL 241
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L+K + E+ V E ++S+++H VK+ + E + NG L +YI
Sbjct: 64 ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 123
Query: 66 HE-QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+ + D+ + T E+ L YLH I H D+K NILL + +I+D
Sbjct: 124 RKIGSFDETCTRF-----YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 175
Query: 125 FRTFKSRAIDRTHLTTQVKV-TFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F T K + + V T YV P+ + SD+++ ++ +L
Sbjct: 176 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 227
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L+K + E+ V E ++S+++H VK+ + E + NG L +YI
Sbjct: 46 ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 105
Query: 66 HE-QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+ + D+ + T E+ L YLH I H D+K NILL + +I+D
Sbjct: 106 RKIGSFDETCTRF-----YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 157
Query: 125 FRTFKSRAIDRTHLTTQVKV-TFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F T K + + V T YV P+ + SD+++ ++ +L
Sbjct: 158 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 209
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L+K + E+ V E ++S+++H VK+ + E + NG L +YI
Sbjct: 42 ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 101
Query: 66 HE-QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+ + D+ + T E+ L YLH I H D+K NILL + +I+D
Sbjct: 102 RKIGSFDETCTRF-----YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 153
Query: 125 FRTFKSRAIDRTHLTTQVKV-TFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F T K + + V T YV P+ + SD+++ ++ +L
Sbjct: 154 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 205
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L+K + E+ V E ++S+++H VK+ + E + NG L +YI
Sbjct: 65 ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 124
Query: 66 HE-QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+ + D+ + T E+ L YLH I H D+K NILL + +I+D
Sbjct: 125 RKIGSFDETCTRF-----YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 176
Query: 125 FRTFKSRAIDRTHLTTQVKV-TFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F T K + + V T YV P+ + SD+++ ++ +L
Sbjct: 177 FGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 228
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 18/169 (10%)
Query: 22 INEVVILSQIN---HRNVVKILGCCL------ETEVPLLVYEFIPNGSLYQYIHEQTDDQ 72
I EV +L + H NVV++ C ET++ LV+E + + L Y+ + +
Sbjct: 59 IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL-TLVFEHV-DQDLTTYLDKVPEPG 116
Query: 73 LPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRA 132
+P E + ++ R L +LHS + H D+K NIL+ Q K++DF +R
Sbjct: 117 VPT--ETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGL--ARI 169
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPI 181
T V VT Y P+ S + D++S + E+ KP+
Sbjct: 170 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 218
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 18/169 (10%)
Query: 22 INEVVILSQIN---HRNVVKILGCCL------ETEVPLLVYEFIPNGSLYQYIHEQTDDQ 72
I EV +L + H NVV++ C ET++ LV+E + + L Y+ + +
Sbjct: 59 IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL-TLVFEHV-DQDLTTYLDKVPEPG 116
Query: 73 LPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRA 132
+P E + ++ R L +LHS + H D+K NIL+ Q K++DF +R
Sbjct: 117 VPT--ETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGL--ARI 169
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPI 181
T V VT Y P+ S + D++S + E+ KP+
Sbjct: 170 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 218
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L+K + E+ V E ++S+++H VK+ + E + NG L +YI
Sbjct: 61 ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 120
Query: 66 HE-QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+ + D+ + T E+ L YLH I H D+K NILL + +I+D
Sbjct: 121 RKIGSFDETCTRF-----YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 172
Query: 125 FRTFKSRAIDRTHLTTQVKV-TFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F T K + + V T YV P+ + SD+++ ++ +L
Sbjct: 173 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 224
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 25/167 (14%)
Query: 17 NVEQF----INEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLY-QYIHEQTDD 71
N+E+F NE+ +L ++H N++K+ + + LV EF G L+ Q I+ D
Sbjct: 85 NIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFD 144
Query: 72 QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDK---YQAKISDF--R 126
+ I ++ + YLH I H DIK NILL +K KI DF
Sbjct: 145 ECDAA-----NIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLS 196
Query: 127 TFKSRAID-RTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVL 172
+F S+ R L T Y+ P+ + ++ EK DV+S V++
Sbjct: 197 SFFSKDYKLRDRLGTAY-----YIAPEVLK-KKYNEKCDVWSCGVIM 237
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 33/230 (14%)
Query: 13 VHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYI--HEQT 69
++ S++++ EV I+ +NH N+VK+ +ETE L LV E+ G ++ Y+ H +
Sbjct: 52 LNSSSLQKLFREVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRM 110
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
++ E R + VS V Y H I H D+K+ N+LL KI+DF F
Sbjct: 111 KEK-----EARAKFRQIVSAV-QYCHQKF---IVHRDLKAENLLLDADMNIKIADF-GFS 160
Query: 130 SRAIDRTHLTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLVEL-NWTKPIHLVDVE 187
+ L T + Y P+ F+ ++ + DV+S V+L L + + P +++
Sbjct: 161 NEFTFGNKLDTFCG-SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 219
Query: 188 ENRS--------LAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
E R + Y S + E + K+ L LN K+ T++++
Sbjct: 220 ELRERVLRGKYRIPFYMSTDCEN--------LLKKFLILNPSKRGTLEQI 261
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 33/230 (14%)
Query: 13 VHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYI--HEQT 69
++ S++++ EV I+ +NH N+VK+ +ETE L LV E+ G ++ Y+ H +
Sbjct: 52 LNSSSLQKLFREVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRM 110
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
++ E R + VS V Y H I H D+K+ N+LL KI+DF F
Sbjct: 111 KEK-----EARAKFRQIVSAV-QYCHQKF---IVHRDLKAENLLLDADMNIKIADF-GFS 160
Query: 130 SRAIDRTHLTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLVEL-NWTKPIHLVDVE 187
+ L T + Y P+ F+ ++ + DV+S V+L L + + P +++
Sbjct: 161 NEFTFGNKLDTFCG-SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 219
Query: 188 ENRS--------LAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
E R + Y S + E + K+ L LN K+ T++++
Sbjct: 220 ELRERVLRGKYRIPFYMSTDCEN--------LLKKFLILNPSKRGTLEQI 261
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 33/230 (14%)
Query: 13 VHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYI--HEQT 69
++ S++++ EV I+ +NH N+VK+ +ETE L LV E+ G ++ Y+ H +
Sbjct: 52 LNSSSLQKLFREVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRM 110
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
++ E R + VS V Y H I H D+K+ N+LL KI+DF F
Sbjct: 111 KEK-----EARAKFRQIVSAV-QYCHQKF---IVHRDLKAENLLLDADMNIKIADF-GFS 160
Query: 130 SRAIDRTHLTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLVEL-NWTKPIHLVDVE 187
+ L T + Y P+ F+ ++ + DV+S V+L L + + P +++
Sbjct: 161 NEFTFGNKLDTFCG-SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 219
Query: 188 ENRS--------LAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
E R + Y S + E + K+ L LN K+ T++++
Sbjct: 220 ELRERVLRGKYRIPFYMSTDCEN--------LLKKFLILNPSKRGTLEQI 261
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L+K + E+ V E ++S+++H VK+ + E + NG L +YI
Sbjct: 61 ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 120
Query: 66 HE-QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
+ + D+ + T E+ L YLH I H D+K NILL + +I+D
Sbjct: 121 RKIGSFDETCTRF-----YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 172
Query: 125 FRTFKSRAIDRTHLTTQVKV-TFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F T K + + V T YV P+ + SD+++ ++ +L
Sbjct: 173 FGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 224
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 29/228 (12%)
Query: 13 VHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDD 71
++ S++++ EV I+ +NH N+VK+ +ETE L LV E+ G ++ Y+
Sbjct: 45 LNSSSLQKLFREVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYL------ 97
Query: 72 QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSR 131
+ W + +++S + I H D+K+ N+LL KI+DF F +
Sbjct: 98 -VAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADF-GFSNE 155
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLVEL-NWTKPIHLVDVEEN 189
L T + Y P+ F+ ++ + DV+S V+L L + + P +++E
Sbjct: 156 FTFGNKLDTFCG-SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 214
Query: 190 RS--------LAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
R + Y S + E + K+ L LN K+ T++++
Sbjct: 215 RERVLRGKYRIPFYMSTDCEN--------LLKKFLILNPSKRGTLEQI 254
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 18/181 (9%)
Query: 7 LKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVP----LLVYEFIPNGSLY 62
LK+ + + E+ E + NH N+++++ CL L+ F G+L+
Sbjct: 59 LKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLW 118
Query: 63 QYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKI 122
I D +T + L + + + R L +H+ H D+K NILL D+ Q +
Sbjct: 119 NEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYA---HRDLKPTNILLGDEGQPVL 175
Query: 123 SDFRTFKSRAI----DRTHLTTQ----VKVTFGYVDPKYFRSSQFT---EKSDVYSFSVV 171
D + I R LT Q + T Y P+ F E++DV+S V
Sbjct: 176 MDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCV 235
Query: 172 L 172
L
Sbjct: 236 L 236
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 16/177 (9%)
Query: 22 INEVVILSQIN---HRNVVKILGCCLETEVP-----LLVYEFIPNGSLYQYIHEQTDDQL 73
+ EV +L ++ H NVV+++ C + LV+E + + L Y+ + L
Sbjct: 59 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGL 117
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI 133
P E + + R L +LH+ I H D+K NIL+ K++DF +R
Sbjct: 118 PA--ETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL--ARIY 170
Query: 134 DRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENR 190
T V VT Y P+ S + D++S + E+ KP+ + E ++
Sbjct: 171 SYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ 227
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 79/188 (42%), Gaps = 35/188 (18%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLE--------TEVP-----LLVYEFIPNGSL 61
E + ++EV +L+ +NH+ VV+ LE T V + E+ N +L
Sbjct: 43 EEKLSTILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTL 102
Query: 62 YQYIH-EQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA 120
Y IH E + Q W R+ ++ LSY+HS I H ++K NI + +
Sbjct: 103 YDLIHSENLNQQRDEYW----RLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNV 155
Query: 121 KISDFRTFKS--RAIDRTHLTTQ-----------VKVTFGYVDPKYF-RSSQFTEKSDVY 166
KI DF K+ R++D L +Q T YV + + + EK D Y
Sbjct: 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXY 215
Query: 167 SFSVVLVE 174
S ++ E
Sbjct: 216 SLGIIFFE 223
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 11/172 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQY 64
+LKK + + +VE + E ILS + + L CC +T L V EF+ G L +
Sbjct: 55 VLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFH 114
Query: 65 IHEQTDDQLPITWEMRLRI-TVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
I + E R R E+ L +LH I + D+K N+LL + K++
Sbjct: 115 IQKSRRFD-----EARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLA 166
Query: 124 DFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
DF K I T T Y+ P+ + + D ++ V+L E+
Sbjct: 167 DFGMCKE-GICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEM 217
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++P G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + K++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIKVADF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 186 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 74/171 (43%), Gaps = 26/171 (15%)
Query: 24 EVVILSQINHRNVVKILGC---CLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEM 79
EV L + H N+++ +G +V L L+ F GSL ++ ++W
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV-----VSWNE 122
Query: 80 RLRITVEVSRVLSYLHSVASIP---------IYHLDIKSANILLVDKYQAKISDFRTFKS 130
I ++R L+YLH IP I H DIKS N+LL + A I+DF
Sbjct: 123 LCHIAETMARGLAYLHE--DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180
Query: 131 RAIDRTHLTTQVKV-TFGYVDPKYFRSS-QFTEKS----DVYSFSVVLVEL 175
++ T +V T Y+ P+ + F + D+Y+ +VL EL
Sbjct: 181 FEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 21/193 (10%)
Query: 11 KSVHESNVEQF-----INEVVILSQIN---HRNVVKILGCCLETEVP-----LLVYEFIP 57
KSV N E+ + EV +L ++ H NVV+++ C + LV+E +
Sbjct: 35 KSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV- 93
Query: 58 NGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDK 117
+ L Y+ + LP E + + R L +LH+ I H D+K NIL+
Sbjct: 94 DQDLRTYLDKAPPPGLPA--ETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSG 148
Query: 118 YQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNW 177
K++DF +R V VT Y P+ S + D++S + E+
Sbjct: 149 GTVKLADFGL--ARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR 206
Query: 178 TKPIHLVDVEENR 190
KP+ + E ++
Sbjct: 207 RKPLFCGNSEADQ 219
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 30/180 (16%)
Query: 5 WLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVP--LLVYEFIPNGSLY 62
W +KS+ +E E L +H NV+ +LG C P L+ + P GSLY
Sbjct: 46 WSTRKSRDFNE--------ECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLY 97
Query: 63 QYIHEQTD---DQLPITWEMRLRITVEVSRVLSYLHSVAS-IPIYHLDIKSANILLVDKY 118
+HE T+ DQ ++ ++ +R ++LH++ IP + L+ +S I
Sbjct: 98 NVLHEGTNFVVDQ-----SQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXTA 152
Query: 119 QAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYF-RSSQFTEK--SDVYSFSVVLVEL 175
+ +D + F ++ R + +V P+ + + T + +D +SF+V+L EL
Sbjct: 153 RISXADVK-FSFQSPGRXYAP-------AWVAPEALQKKPEDTNRRSADXWSFAVLLWEL 204
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++P G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + K++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIKVADF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 186 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 105/230 (45%), Gaps = 33/230 (14%)
Query: 13 VHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYI--HEQT 69
++ S++++ EV I+ +NH N+VK+ +ETE L LV E+ G ++ Y+ H +
Sbjct: 52 LNSSSLQKLFREVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRM 110
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
++ E R + VS V Y H I H D+K+ N+LL KI+DF F
Sbjct: 111 KEK-----EARAKFRQIVSAV-QYCHQKF---IVHRDLKAENLLLDADMNIKIADF-GFS 160
Query: 130 SRAIDRTHLTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLVEL-NWTKPIHLVDVE 187
+ L Y P+ F+ ++ + DV+S V+L L + + P +++
Sbjct: 161 NEFTFGNKLDAFCGAP-PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 219
Query: 188 ENRS--------LAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
E R + Y S + E + K+ L LN K+ T++++
Sbjct: 220 ELRERVLRGKYRIPFYMSTDCEN--------LLKKFLILNPSKRGTLEQI 261
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++P G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + K++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIKVADF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 186 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P SL ++ + E
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMEL 110
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 111 MDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S V++ E+
Sbjct: 171 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEM 218
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 28/186 (15%)
Query: 60 SLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ 119
SL ++ + D I ++ +I V + + L +LHS S+ H D+K +N+L+ Q
Sbjct: 135 SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV--IHRDVKPSNVLINALGQ 192
Query: 120 AKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKY----FRSSQFTEKSDVYSFSVVLVEL 175
K+ DF +D T Y+ P+ ++ KSD++S + ++EL
Sbjct: 193 VKMCDF-GISGYLVDSVAKTIDAGCK-PYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
Query: 176 --------NWTKPI----HLVDVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQ 223
+W P +V+ + A FS E F +CL N K++
Sbjct: 251 AILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAE--------FVDFTSQCLKKNSKER 302
Query: 224 PTMKEV 229
PT E+
Sbjct: 303 PTYPEL 308
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 16/167 (9%)
Query: 13 VHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYI--HEQT 69
++ +++++ EV I+ +NH N+VK+ +ETE L LV E+ G ++ Y+ H +
Sbjct: 53 LNPTSLQKLFREVRIMKILNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRM 111
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
++ E R + VS V Y H I H D+K+ N+LL KI+DF F
Sbjct: 112 KEK-----EARAKFRQIVSAV-QYCHQKY---IVHRDLKAENLLLDGDMNIKIADF-GFS 161
Query: 130 SRAIDRTHLTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLVEL 175
+ L T + Y P+ F+ ++ + DV+S V+L L
Sbjct: 162 NEFTVGNKLDTFCG-SPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 207
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P SL ++ + E
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMEL 110
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 111 MDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S V++ E+
Sbjct: 171 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEM 218
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 4 LWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQ 63
L +L KS+ E Q E+ I + ++H N++++ + L+ E+ P G LY+
Sbjct: 53 LKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYK 112
Query: 64 YIHEQT--DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
+ + D+Q T I E++ L Y H I H DIK N+LL K + K
Sbjct: 113 ELQKSCTFDEQRTAT------IMEELADALMYCHGKKVI---HRDIKPENLLLGLKGELK 163
Query: 122 ISDFR-TFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
I+DF + + ++ R + T Y+ P+ EK D++ V+ EL P
Sbjct: 164 IADFGWSVHAPSLRRKTMCG----TLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNP 219
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 33/230 (14%)
Query: 13 VHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYI--HEQT 69
++ S++++ EV I+ +NH N+VK+ +ETE L LV E+ G ++ Y+ H +
Sbjct: 52 LNSSSLQKLFREVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRM 110
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
++ E R + VS V Y H I H D+K+ N+LL KI+DF
Sbjct: 111 KEK-----EARAKFRQIVSAV-QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGF-- 159
Query: 130 SRAIDRTHLTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLVEL-NWTKPIHLVDVE 187
S + + + Y P+ F+ ++ + DV+S V+L L + + P +++
Sbjct: 160 SNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 219
Query: 188 ENRS--------LAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
E R + Y S + E + K+ L LN K+ T++++
Sbjct: 220 ELRERVLRGKYRIPFYMSTDCEN--------LLKKFLILNPSKRGTLEQI 261
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 21/193 (10%)
Query: 11 KSVHESNVEQF-----INEVVILSQIN---HRNVVKILGCCLETEVP-----LLVYEFIP 57
KSV N E+ + EV +L ++ H NVV+++ C + LV+E +
Sbjct: 35 KSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV- 93
Query: 58 NGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDK 117
+ L Y+ + LP E + + R L +LH+ I H D+K NIL+
Sbjct: 94 DQDLRTYLDKAPPPGLPA--ETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSG 148
Query: 118 YQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNW 177
K++DF +R V VT Y P+ S + D++S + E+
Sbjct: 149 GTVKLADFGL--ARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR 206
Query: 178 TKPIHLVDVEENR 190
KP+ + E ++
Sbjct: 207 RKPLFCGNSEADQ 219
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 33/230 (14%)
Query: 13 VHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYI--HEQT 69
++ +++++ EV I+ +NH N+VK+ +ETE L L+ E+ G ++ Y+ H +
Sbjct: 50 LNPTSLQKLFREVRIMKILNHPNIVKLF-EVIETEKTLYLIMEYASGGEVFDYLVAHGRM 108
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
++ E R + VS V Y H I H D+K+ N+LL KI+DF F
Sbjct: 109 KEK-----EARSKFRQIVSAV-QYCHQKR---IVHRDLKAENLLLDADMNIKIADF-GFS 158
Query: 130 SRAIDRTHLTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLVEL-NWTKPIHLVDVE 187
+ L T + Y P+ F+ ++ + DV+S V+L L + + P +++
Sbjct: 159 NEFTVGGKLDTFCG-SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 217
Query: 188 ENRS--------LAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
E R + Y S + E + KR L LN K+ T++++
Sbjct: 218 ELRERVLRGKYRIPFYMSTDCEN--------LLKRFLVLNPIKRGTLEQI 259
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 4 LWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQ 63
L +KKS + +S++E NE+ +L +I H N+V + T LV + + G L+
Sbjct: 39 LKCIKKSPAFRDSSLE---NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFD 95
Query: 64 YIHEQTDDQLPITWEMRLRITV-EVSRVLSYLHSVASIPIYHLDIKSANILLV---DKYQ 119
I E+ + E + + +V + YLH I H D+K N+L + + +
Sbjct: 96 RILERG-----VYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSK 147
Query: 120 AKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVV 171
I+DF K +++ + + T GYV P+ +++ D +S V+
Sbjct: 148 IMITDFGLSK---MEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 196
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 18/170 (10%)
Query: 16 SNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFI------PNGSLYQYIHEQT 69
+N ++ + E+ IL H N++ I L VP ++ + L+Q IH
Sbjct: 96 TNAKRTLRELKILKHFKHDNIIAIKDI-LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ 154
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---R 126
P+T E ++ R L Y+HS I H D+K +N+L+ + + KI DF R
Sbjct: 155 ----PLTLEHVRYFLYQLLRGLKYMHSAQVI---HRDLKPSNLLVNENCELKIGDFGMAR 207
Query: 127 TFKSRAIDRTHLTTQVKVTFGYVDPKYFRS-SQFTEKSDVYSFSVVLVEL 175
+ + + T+ T Y P+ S ++T+ D++S + E+
Sbjct: 208 GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEM 257
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 18/170 (10%)
Query: 16 SNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFI------PNGSLYQYIHEQT 69
+N ++ + E+ IL H N++ I L VP ++ + L+Q IH
Sbjct: 95 TNAKRTLRELKILKHFKHDNIIAIKDI-LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ 153
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---R 126
P+T E ++ R L Y+HS I H D+K +N+L+ + + KI DF R
Sbjct: 154 ----PLTLEHVRYFLYQLLRGLKYMHSAQVI---HRDLKPSNLLVNENCELKIGDFGMAR 206
Query: 127 TFKSRAIDRTHLTTQVKVTFGYVDPKYFRS-SQFTEKSDVYSFSVVLVEL 175
+ + + T+ T Y P+ S ++T+ D++S + E+
Sbjct: 207 GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEM 256
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCL------ETEVPLLVYEFIPNGSLYQYIHE 67
++++ ++ E+V+L +NH+N++ +L E + LV E + + +L Q IH
Sbjct: 61 NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHM 119
Query: 68 QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRT 127
+ D + R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 120 ELDHE---------RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 170
Query: 128 FKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + T VT Y P+ + E D++S ++ EL
Sbjct: 171 --ARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEL 216
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P SL ++ + E
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMEL 110
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 111 MDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 171 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 16/165 (9%)
Query: 11 KSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
+ V ++E+ EV IL +I H NV+ + +L+ E + G L+ ++ E+
Sbjct: 54 RGVSREDIER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 71 DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD----KYQAKISDFR 126
+T E ++ + YLHS + I H D+K NI+L+D K + KI DF
Sbjct: 111 ----LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 127 TFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVV 171
+ ID + + T +V P+ ++D++S V+
Sbjct: 164 L--AHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 11 KSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
+ V ++E+ EV IL +I H NV+ + +L+ E + G L+ ++ E+
Sbjct: 54 RGVSREDIER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 71 DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD----KYQAKISDFR 126
+T E ++ + YLHS+ I H D+K NI+L+D K + KI DF
Sbjct: 111 ----LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 127 TFKSRAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVV 171
+ ID + K FG +V P+ ++D++S V+
Sbjct: 164 L--AHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 12/183 (6%)
Query: 2 EELW---LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIP 57
EEL+ +LKK + + +VE + E +L+ ++ + L C +T L V E++
Sbjct: 44 EELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVN 103
Query: 58 NGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDK 117
G L +I + + P + E+S L +LH I + D+K N++L +
Sbjct: 104 GGDLMYHIQQVGKFKEP----QAVFYAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSE 156
Query: 118 YQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNW 177
KI+DF K +D T + T Y+ P+ + + D +++ V+L E+
Sbjct: 157 GHIKIADFGMCKEHMMDGV-TTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLA 215
Query: 178 TKP 180
+P
Sbjct: 216 GQP 218
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 15/175 (8%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKIL----GCCLETEVPLLVYEFIPNGSLYQYIHEQT 69
H++ ++ + E+ IL + H NV+ I LE + + + + LY+ + Q
Sbjct: 81 HQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ 140
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
I + ++ R L Y+HS + H D+K +N+L+ KI DF +
Sbjct: 141 LSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLAR 192
Query: 130 --SRAIDRTHLTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKPI 181
D T T+ T Y P+ +S+ +T+ D++S +L E+ +PI
Sbjct: 193 IADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 247
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P SL ++ + E
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMEL 110
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 111 MDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 171 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P SL ++ + E
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMEL 111
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 112 MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 171
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 172 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 219
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 21/193 (10%)
Query: 11 KSVHESNVEQF-----INEVVILSQIN---HRNVVKILGCCLETEVP-----LLVYEFIP 57
KSV N E+ + EV +L ++ H NVV+++ C + LV+E +
Sbjct: 35 KSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV- 93
Query: 58 NGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDK 117
+ L Y+ + LP E + + R L +LH+ I H D+K NIL+
Sbjct: 94 DQDLRTYLDKAPPPGLPA--ETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSG 148
Query: 118 YQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNW 177
K++DF +R V VT Y P+ S + D++S + E+
Sbjct: 149 GTVKLADFGL--ARIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR 206
Query: 178 TKPIHLVDVEENR 190
KP+ + E ++
Sbjct: 207 RKPLFCGNSEADQ 219
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P SL ++ + E
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMEL 110
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 111 MDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 171 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 11 KSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
+ V ++E+ EV IL +I H NV+ + +L+ E + G L+ ++ E+
Sbjct: 54 RGVSREDIER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 71 DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD----KYQAKISDFR 126
+T E ++ + YLHS + I H D+K NI+L+D K + KI DF
Sbjct: 111 ----LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 127 TFKSRAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVV 171
+ ID + K FG +V P+ ++D++S V+
Sbjct: 164 L--AHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++P G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 186 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 11 KSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
+ V ++E+ EV IL +I H NV+ + +L+ E + G L+ ++ E+
Sbjct: 54 RGVSREDIER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 71 DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD----KYQAKISDFR 126
+T E ++ + YLHS+ I H D+K NI+L+D K + KI DF
Sbjct: 111 ----LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 127 TFKSRAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVV 171
+ ID + K FG +V P+ ++D++S V+
Sbjct: 164 L--AHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 13/181 (7%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++P G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRI-TVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
++ E R ++ YLHS+ I + D+K N+L+ + +++D
Sbjct: 133 R-----RIGRFXEPHARFYAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTD 184
Query: 125 FRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLV 184
F F R RT T Y+ P+ S + + D ++ V++ E+ P
Sbjct: 185 F-GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 185 D 185
D
Sbjct: 241 D 241
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+ KK+ E ++E NE+ +L +I H N+V + L+ + + G L+ I
Sbjct: 51 IAKKALEGKEGSME---NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI 107
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANIL---LVDKYQAKI 122
E+ T R+ +V + YLH + I H D+K N+L L + + I
Sbjct: 108 VEKG----FYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMI 160
Query: 123 SDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVV 171
SDF S+ D + + T GYV P+ +++ D +S V+
Sbjct: 161 SDFGL--SKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++P G ++ ++
Sbjct: 94 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 153
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 154 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 206
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 207 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 262
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P SL ++ + E
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMEL 110
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 111 MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 171 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 72 QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF----RT 127
Q PI + ++TV + + L YL + H D+K +NILL ++ Q K+ DF R
Sbjct: 118 QGPIPERILGKMTVAIVKALYYLKEKHGV--IHRDVKPSNILLDERGQIKLCDFGISGRL 175
Query: 128 FKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+A DR+ + +DP + ++DV+S + LVEL
Sbjct: 176 VDDKAKDRS-AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVEL 222
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 13/181 (7%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++P G ++ ++
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
Query: 66 HEQTDDQLPITWEMRLRI-TVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
++ E R ++ YLHS+ I + D+K N+L+ + +++D
Sbjct: 134 R-----RIGRFXEPHARFYAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTD 185
Query: 125 FRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLV 184
F F R RT T Y+ P+ S + + D ++ V++ E+ P
Sbjct: 186 F-GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Query: 185 D 185
D
Sbjct: 242 D 242
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 11 KSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
+ V ++E+ EV IL +I H NV+ + +L+ E + G L+ ++ E+
Sbjct: 54 RGVSREDIER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 71 DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD----KYQAKISDFR 126
+T E ++ + YLHS + I H D+K NI+L+D K + KI DF
Sbjct: 111 ----LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 127 TFKSRAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVV 171
+ ID + K FG +V P+ ++D++S V+
Sbjct: 164 L--AHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 11 KSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
+ V ++E+ EV IL +I H NV+ + +L+ E + G L+ ++ E+
Sbjct: 54 RGVSREDIER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 71 DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD----KYQAKISDFR 126
+T E ++ + YLHS+ I H D+K NI+L+D K + KI DF
Sbjct: 111 ----LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 127 TFKSRAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVV 171
+ ID + K FG +V P+ ++D++S V+
Sbjct: 164 L--AHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++P G ++ ++
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 134 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 186
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 187 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++P G ++ ++
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 134 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 186
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 187 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++P G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 186 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++P G ++ ++
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 134 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 186
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 187 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++P G ++ ++
Sbjct: 59 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 118
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 119 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 171
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 172 -GFAKRVKGRTWTLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 227
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++P G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 133 RRIGRFXEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 186 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++P G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 186 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 11 KSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
+ V ++E+ EV IL +I H NV+ + +L+ E + G L+ ++ E+
Sbjct: 53 RGVSREDIER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 109
Query: 71 DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD----KYQAKISDFR 126
+T E ++ + YLHS+ I H D+K NI+L+D K + KI DF
Sbjct: 110 ----LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFG 162
Query: 127 TFKSRAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVV 171
+ ID + K FG +V P+ ++D++S V+
Sbjct: 163 L--AHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 205
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++P G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 186 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 11 KSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
+ V ++E+ EV IL +I H NV+ + +L+ E + G L+ ++ E+
Sbjct: 54 RGVSREDIER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 71 DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD----KYQAKISDFR 126
+T E ++ + YLHS+ I H D+K NI+L+D K + KI DF
Sbjct: 111 ----LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 127 TFKSRAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVV 171
+ ID + K FG +V P+ ++D++S V+
Sbjct: 164 L--AHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P +L ++ + E
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMEL 110
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 111 MDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDF 170
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 171 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++P G ++ ++
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 134 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 186
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 187 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 11 KSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
+ V ++E+ EV IL +I H NV+ + +L+ E + G L+ ++ E+
Sbjct: 54 RGVSREDIER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 71 DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD----KYQAKISDFR 126
+T E ++ + YLHS+ I H D+K NI+L+D K + KI DF
Sbjct: 111 ----LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 127 TFKSRAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVV 171
+ ID + K FG +V P+ ++D++S V+
Sbjct: 164 L--AHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 11 KSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
+ V ++E+ EV IL +I H NV+ + +L+ E + G L+ ++ E+
Sbjct: 53 RGVSREDIER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 109
Query: 71 DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD----KYQAKISDFR 126
+T E ++ + YLHS+ I H D+K NI+L+D K + KI DF
Sbjct: 110 ----LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFG 162
Query: 127 TFKSRAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVV 171
+ ID + K FG +V P+ ++D++S V+
Sbjct: 163 L--AHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 205
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++P G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 186 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 11 KSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
+ V ++E+ EV IL +I H NV+ + +L+ E + G L+ ++ E+
Sbjct: 54 RGVSREDIER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 71 DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD----KYQAKISDFR 126
+T E ++ + YLHS + I H D+K NI+L+D K + KI DF
Sbjct: 111 ----LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 127 TFKSRAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVV 171
+ ID + K FG +V P+ ++D++S V+
Sbjct: 164 L--AHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P SL ++ + E
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMEL 110
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 111 MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 171 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++P G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 186 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 11 KSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
+ V ++E+ EV IL +I H NV+ + +L+ E + G L+ ++ E+
Sbjct: 54 RGVSREDIER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 71 DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD----KYQAKISDFR 126
+T E ++ + YLHS+ I H D+K NI+L+D K + KI DF
Sbjct: 111 ----LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 127 TFKSRAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVV 171
+ ID + K FG +V P+ ++D++S V+
Sbjct: 164 L--AHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++P G ++ ++
Sbjct: 66 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 125
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 126 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 178
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 179 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++P G ++ ++
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 134 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 186
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 187 -GFAKRVKGRTWTLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++P G ++ ++
Sbjct: 66 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 125
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 126 RRIGRFXEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 178
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 179 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 234
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 15/175 (8%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKI----LGCCLETEVPLLVYEFIPNGSLYQYIHEQT 69
H++ ++ + E+ IL + H N++ I +E + + + LY+ + Q
Sbjct: 81 HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH 140
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
I + ++ R L Y+HS + H D+K +N+LL KI DF +
Sbjct: 141 LSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLAR 192
Query: 130 SRAIDRTH--LTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKPI 181
D H T+ T Y P+ +S+ +T+ D++S +L E+ +PI
Sbjct: 193 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 247
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P +L ++ + E
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMEL 110
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 111 MDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDF 170
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 171 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P +L ++ + E
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMEL 110
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 111 MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDF 170
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 171 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 33/230 (14%)
Query: 13 VHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYI--HEQT 69
++ +++++ EV I+ +NH N+VK+ +ETE L L+ E+ G ++ Y+ H +
Sbjct: 53 LNPTSLQKLFREVRIMKILNHPNIVKLFE-VIETEKTLYLIMEYASGGEVFDYLVAHGRM 111
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
++ E R + VS V Y H I H D+K+ N+LL KI+DF F
Sbjct: 112 KEK-----EARSKFRQIVSAV-QYCHQKR---IVHRDLKAENLLLDADMNIKIADF-GFS 161
Query: 130 SRAIDRTHLTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLVEL-NWTKPIHLVDVE 187
+ L Y P+ F+ ++ + DV+S V+L L + + P +++
Sbjct: 162 NEFTVGGKLDAFCGAP-PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 220
Query: 188 ENRS--------LAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV 229
E R + Y S + E + KR L LN K+ T++++
Sbjct: 221 ELRERVLRGKYRIPFYMSTDCEN--------LLKRFLVLNPIKRGTLEQI 262
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 11 KSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
+ V ++E+ EV IL +I H NV+ + +L+ E + G L+ ++ E+
Sbjct: 54 RGVSREDIER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 71 DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD----KYQAKISDFR 126
+T E ++ + YLHS + I H D+K NI+L+D K + KI DF
Sbjct: 111 ----LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 127 TFKSRAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVV 171
+ ID + K FG +V P+ ++D++S V+
Sbjct: 164 L--AHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 11 KSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
+ V ++E+ EV IL +I H NV+ + +L+ E + G L+ ++ E+
Sbjct: 54 RGVSREDIER---EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES 110
Query: 71 DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD----KYQAKISDFR 126
+T E ++ + YLHS+ I H D+K NI+L+D K + KI DF
Sbjct: 111 ----LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 127 TFKSRAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVV 171
+ ID + K FG +V P+ ++D++S V+
Sbjct: 164 L--AHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P SL ++ + E
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMEL 110
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 111 MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 171 GL--ARTAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P SL ++ + E
Sbjct: 68 NQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMEL 115
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 116 MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 175
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 176 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEM 223
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P SL ++ + E
Sbjct: 57 NQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMEL 104
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 105 MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 164
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 165 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEM 212
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 90/184 (48%), Gaps = 14/184 (7%)
Query: 2 EELWLLKKSKSVHESNVE-QFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNG 59
+ L LK+ + HE I EV +L + H N+V L + TE L LV+E++ +
Sbjct: 27 DNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV-TLHDIIHTEKSLTLVFEYL-DK 84
Query: 60 SLYQYIHEQTDDQLPITWEMRLRITV-EVSRVLSYLHSVASIPIYHLDIKSANILLVDKY 118
L QY+ DD I +++ + ++ R L+Y H + H D+K N+L+ ++
Sbjct: 85 DLKQYL----DDCGNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERG 137
Query: 119 QAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPK-YFRSSQFTEKSDVYSFSVVLVELNW 177
+ K++DF ++++I +V VT Y P S+ ++ + D++ + E+
Sbjct: 138 ELKLADFGLARAKSIPTKTYDNEV-VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMAT 196
Query: 178 TKPI 181
+P+
Sbjct: 197 GRPL 200
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P SL ++ + E
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMEL 110
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 111 MDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 171 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E+ P G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+++ + K++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLMIDQQGYIKVTDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 186 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 13 VHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYI--HEQT 69
++ S++++ EV I +NH N+VK+ +ETE L LV E+ G ++ Y+ H +
Sbjct: 52 LNSSSLQKLFREVRIXKVLNHPNIVKLF-EVIETEKTLYLVXEYASGGEVFDYLVAHGRX 110
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
++ E R + VS V Y H I H D+K+ N+LL KI+DF F
Sbjct: 111 KEK-----EARAKFRQIVSAV-QYCHQKF---IVHRDLKAENLLLDADXNIKIADF-GFS 160
Query: 130 SRAIDRTHLTTQVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLVEL 175
+ L Y P+ F+ ++ + DV+S V+L L
Sbjct: 161 NEFTFGNKLDAFCGAP-PYAAPELFQGKKYDGPEVDVWSLGVILYTL 206
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E+ P G ++ ++
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 133
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+++ + K++DF
Sbjct: 134 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLMIDQQGYIKVTDF 186
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 187 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 27/182 (14%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
V++ NEV I Q+ H +++++ ++ LV E NG + +Y+ + P +
Sbjct: 55 VQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK---PFSE 111
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
++ + YLHS I H D+ +N+LL KI+DF
Sbjct: 112 NEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFG----------- 157
Query: 138 LTTQVKV----------TFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVE 187
L TQ+K+ T Y+ P+ S +SDV+S + L +P D
Sbjct: 158 LATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTV 217
Query: 188 EN 189
+N
Sbjct: 218 KN 219
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 8 KKSKSVHESNVEQFINEVVILSQINHRNVVKI----LGCCLETEVPLLVYEFIPNGSLYQ 63
K S H++ ++ + E+ IL + H N++ I +E + + + + LY+
Sbjct: 53 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 112
Query: 64 YIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
+ Q I + ++ R L Y+HS + H D+K +N+LL KI
Sbjct: 113 LLKTQHLSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKIC 164
Query: 124 DFRTFKSRAIDRTH--LTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKP 180
DF + D H T+ T Y P+ +S+ +T+ D++S +L E+ +P
Sbjct: 165 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 224
Query: 181 I----HLVDVEENRSLAAYFSKEAE 201
I H +D + N L S E E
Sbjct: 225 IFPGKHYLD-QLNHILGILGSPEQE 248
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 12/165 (7%)
Query: 10 SKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQT 69
+K E NE+ +L +I H N+V + L+ + + G L+ I E+
Sbjct: 52 AKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG 111
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANIL---LVDKYQAKISDFR 126
T R+ +V + YLH + I H D+K N+L L + + ISDF
Sbjct: 112 ----FYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFG 164
Query: 127 TFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVV 171
S+ D + + T GYV P+ +++ D +S V+
Sbjct: 165 L--SKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 13/181 (7%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E+ P G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRI-TVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
++ E R ++ YLHS+ I + D+K N+++ + K++D
Sbjct: 133 R-----RIGRFXEPHARFYAAQIVLTFEYLHSLDLI---YRDLKPENLMIDQQGYIKVTD 184
Query: 125 FRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLV 184
F F R RT T Y+ P+ S + + D ++ V++ E+ P
Sbjct: 185 F-GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 185 D 185
D
Sbjct: 241 D 241
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 50 LLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKS 109
L+V E + G L+ I ++ D T I + + YLHS I I H D+K
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAF--TEREASEIMKSIGEAIQYLHS---INIAHRDVKP 159
Query: 110 ANILLVDKYQA---KISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVY 166
N+L K K++DF F LTT + YV P+ ++ + D++
Sbjct: 160 ENLLYTSKRPNAILKLTDF-GFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 217
Query: 167 SFSVVL 172
S V++
Sbjct: 218 SLGVIM 223
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Query: 8 KKSKSVHESNVEQFINEVVILSQINHRNVVKI----LGCCLETEVPLLVYEFIPNGSLYQ 63
K S H++ ++ + E+ IL + H N++ I +E + + + + LY+
Sbjct: 59 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 118
Query: 64 YIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
+ Q I + ++ R L Y+HS + H D+K +N+LL KI
Sbjct: 119 LLKTQHLSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIC 170
Query: 124 DFRTFKSRAIDRTH--LTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKP 180
DF + D H T+ T Y P+ +S+ +T+ D++S +L E+ +P
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 181 I 181
I
Sbjct: 231 I 231
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 12/165 (7%)
Query: 10 SKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQT 69
+K E NE+ +L +I H N+V + L+ + + G L+ I E+
Sbjct: 52 AKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG 111
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANIL---LVDKYQAKISDFR 126
T R+ +V + YLH + I H D+K N+L L + + ISDF
Sbjct: 112 ----FYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFG 164
Query: 127 TFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVV 171
S+ D + + T GYV P+ +++ D +S V+
Sbjct: 165 L--SKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 15/175 (8%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKI----LGCCLETEVPLLVYEFIPNGSLYQYIHEQT 69
H++ ++ + E+ IL + H N++ I +E + + + + LY+ + Q
Sbjct: 61 HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 120
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
I + ++ R L Y+HS + H D+K +N+LL KI DF +
Sbjct: 121 LSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLAR 172
Query: 130 SRAIDRTH--LTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKPI 181
D H T+ T Y P+ +S+ +T+ D++S +L E+ +PI
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 12/165 (7%)
Query: 10 SKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQT 69
+K E NE+ +L +I H N+V + L+ + + G L+ I E+
Sbjct: 52 AKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG 111
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANIL---LVDKYQAKISDFR 126
T R+ +V + YLH + I H D+K N+L L + + ISDF
Sbjct: 112 ----FYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFG 164
Query: 127 TFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVV 171
S+ D + + T GYV P+ +++ D +S V+
Sbjct: 165 L--SKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 50 LLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKS 109
L+V E + G L+ I ++ D T I + + YLHS I I H D+K
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAF--TEREASEIMKSIGEAIQYLHS---INIAHRDVKP 195
Query: 110 ANILLVDKYQA---KISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVY 166
N+L K K++DF F LTT + YV P+ ++ + D++
Sbjct: 196 ENLLYTSKRPNAILKLTDF-GFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 253
Query: 167 SFSVVL 172
S V++
Sbjct: 254 SLGVIM 259
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 50 LLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKS 109
L+V E + G L+ I ++ D T I + + YLHS I I H D+K
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAF--TEREASEIMKSIGEAIQYLHS---INIAHRDVKP 189
Query: 110 ANILLVDKYQA---KISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVY 166
N+L K K++DF F LTT + YV P+ ++ + D++
Sbjct: 190 ENLLYTSKRPNAILKLTDF-GFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 247
Query: 167 SFSVVL 172
S V++
Sbjct: 248 SLGVIM 253
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P +L ++ + E
Sbjct: 56 NQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMEL 103
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 104 MDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDF 163
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 164 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 211
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 50 LLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKS 109
L+V E + G L+ I ++ D T I + + YLHS I I H D+K
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAF--TEREASEIMKSIGEAIQYLHS---INIAHRDVKP 145
Query: 110 ANILLVDKYQA---KISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVY 166
N+L K K++DF F LTT + YV P+ ++ + D++
Sbjct: 146 ENLLYTSKRPNAILKLTDF-GFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 203
Query: 167 SFSVVL 172
S V++
Sbjct: 204 SLGVIM 209
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P +L ++ + E
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMEL 110
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 111 MDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDF 170
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 171 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P +L ++ + E
Sbjct: 57 NQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMEL 104
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 105 MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 164
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 165 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 212
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 50 LLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKS 109
L+V E + G L+ I ++ D T I + + YLHS I I H D+K
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAF--TEREASEIMKSIGEAIQYLHS---INIAHRDVKP 143
Query: 110 ANILLVDKYQA---KISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVY 166
N+L K K++DF F LTT + YV P+ ++ + D++
Sbjct: 144 ENLLYTSKRPNAILKLTDF-GFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 201
Query: 167 SFSVVL 172
S V++
Sbjct: 202 SLGVIM 207
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Query: 8 KKSKSVHESNVEQFINEVVILSQINHRNVVKI----LGCCLETEVPLLVYEFIPNGSLYQ 63
K S H++ ++ + E+ IL + H N++ I +E + + + + LY+
Sbjct: 75 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 134
Query: 64 YIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
+ Q I + ++ R L Y+HS + H D+K +N+LL KI
Sbjct: 135 LLKTQHLSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKIC 186
Query: 124 DFRTFKSRAIDRTH--LTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKP 180
DF + D H T+ T Y P+ +S+ +T+ D++S +L E+ +P
Sbjct: 187 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 246
Query: 181 I 181
I
Sbjct: 247 I 247
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Query: 8 KKSKSVHESNVEQFINEVVILSQINHRNVVKI----LGCCLETEVPLLVYEFIPNGSLYQ 63
K S H++ ++ + E+ IL + H N++ I +E + + + + LY+
Sbjct: 63 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 122
Query: 64 YIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
+ Q I + ++ R L Y+HS + H D+K +N+LL KI
Sbjct: 123 LLKTQHLSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKIC 174
Query: 124 DFRTFKSRAIDRTH--LTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKP 180
DF + D H T+ T Y P+ +S+ +T+ D++S +L E+ +P
Sbjct: 175 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 234
Query: 181 I 181
I
Sbjct: 235 I 235
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Query: 8 KKSKSVHESNVEQFINEVVILSQINHRNVVKI----LGCCLETEVPLLVYEFIPNGSLYQ 63
K S H++ ++ + E+ IL + H N++ I +E + + + + LY+
Sbjct: 55 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 114
Query: 64 YIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
+ Q I + ++ R L Y+HS + H D+K +N+LL KI
Sbjct: 115 LLKTQHLSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKIC 166
Query: 124 DFRTFKSRAIDRTH--LTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKP 180
DF + D H T+ T Y P+ +S+ +T+ D++S +L E+ +P
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 181 I 181
I
Sbjct: 227 I 227
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Query: 8 KKSKSVHESNVEQFINEVVILSQINHRNVVKI----LGCCLETEVPLLVYEFIPNGSLYQ 63
K S H++ ++ + E+ IL + H N++ I +E + + + + LY+
Sbjct: 59 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 118
Query: 64 YIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
+ Q I + ++ R L Y+HS + H D+K +N+LL KI
Sbjct: 119 LLKTQHLSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKIC 170
Query: 124 DFRTFKSRAIDRTH--LTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKP 180
DF + D H T+ T Y P+ +S+ +T+ D++S +L E+ +P
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 181 I 181
I
Sbjct: 231 I 231
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 15/175 (8%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKI----LGCCLETEVPLLVYEFIPNGSLYQYIHEQT 69
H++ ++ + E+ IL + H N++ I +E + + + + LY+ + Q
Sbjct: 61 HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 120
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
I + ++ R L Y+HS + H D+K +N+LL KI DF +
Sbjct: 121 LSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLAR 172
Query: 130 SRAIDRTH--LTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKPI 181
D H T+ T Y P+ +S+ +T+ D++S +L E+ +PI
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 50 LLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKS 109
L+V E + G L+ I ++ D T I + + YLHS+ I H D+K
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQAF--TEREASEIMKSIGEAIQYLHSIN---IAHRDVKP 151
Query: 110 ANILLVDKYQA---KISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVY 166
N+L K K++DF F LTT + YV P+ ++ + D++
Sbjct: 152 ENLLYTSKRPNAILKLTDF-GFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 209
Query: 167 SFSVVL 172
S V++
Sbjct: 210 SLGVIM 215
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P +L ++ + E
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMEL 111
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 112 MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 171
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 172 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 219
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P +L ++ + E
Sbjct: 57 NQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMEL 104
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 105 MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 164
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 165 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 212
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 50 LLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKS 109
L+V E + G L+ I ++ D T I + + YLHS I I H D+K
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQAF--TEREASEIMKSIGEAIQYLHS---INIAHRDVKP 144
Query: 110 ANILLVDKYQA---KISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVY 166
N+L K K++DF F LTT + YV P+ ++ + D++
Sbjct: 145 ENLLYTSKRPNAILKLTDF-GFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 202
Query: 167 SFSVVL 172
S V++
Sbjct: 203 SLGVIM 208
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Query: 8 KKSKSVHESNVEQFINEVVILSQINHRNVVKI----LGCCLETEVPLLVYEFIPNGSLYQ 63
K S H++ ++ + E+ IL + H N++ I +E + + + + LY+
Sbjct: 60 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 119
Query: 64 YIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
+ Q I + ++ R L Y+HS + H D+K +N+LL KI
Sbjct: 120 LLKTQHLSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKIC 171
Query: 124 DFRTFKSRAIDRTH--LTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKP 180
DF + D H T+ T Y P+ +S+ +T+ D++S +L E+ +P
Sbjct: 172 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 231
Query: 181 I 181
I
Sbjct: 232 I 232
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Query: 8 KKSKSVHESNVEQFINEVVILSQINHRNVVKI----LGCCLETEVPLLVYEFIPNGSLYQ 63
K S H++ ++ + E+ IL + H N++ I +E + + + + LY+
Sbjct: 61 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 120
Query: 64 YIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
+ Q I + ++ R L Y+HS + H D+K +N+LL KI
Sbjct: 121 LLKTQHLSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKIC 172
Query: 124 DFRTFKSRAIDRTH--LTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKP 180
DF + D H T+ T Y P+ +S+ +T+ D++S +L E+ +P
Sbjct: 173 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 232
Query: 181 I 181
I
Sbjct: 233 I 233
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Query: 8 KKSKSVHESNVEQFINEVVILSQINHRNVVKI----LGCCLETEVPLLVYEFIPNGSLYQ 63
K S H++ ++ + E+ IL + H N++ I +E + + + + LY+
Sbjct: 52 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 111
Query: 64 YIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
+ Q I + ++ R L Y+HS + H D+K +N+LL KI
Sbjct: 112 LLKTQHLSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKIC 163
Query: 124 DFRTFKSRAIDRTH--LTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKP 180
DF + D H T+ T Y P+ +S+ +T+ D++S +L E+ +P
Sbjct: 164 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 223
Query: 181 I 181
I
Sbjct: 224 I 224
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Query: 8 KKSKSVHESNVEQFINEVVILSQINHRNVVKI----LGCCLETEVPLLVYEFIPNGSLYQ 63
K S H++ ++ + E+ IL + H N++ I +E + + + + LY+
Sbjct: 59 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 118
Query: 64 YIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
+ Q I + ++ R L Y+HS + H D+K +N+LL KI
Sbjct: 119 LLKTQHLSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKIC 170
Query: 124 DFRTFKSRAIDRTH--LTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKP 180
DF + D H T+ T Y P+ +S+ +T+ D++S +L E+ +P
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 181 I 181
I
Sbjct: 231 I 231
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P +L ++ + E
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMEL 110
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 111 MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 171 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P +L ++ + E
Sbjct: 56 NQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMEL 103
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 104 MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 163
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 164 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 211
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 15/175 (8%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKI----LGCCLETEVPLLVYEFIPNGSLYQYIHEQT 69
H++ ++ + E+ IL + H N++ I +E + + + + LY+ + Q
Sbjct: 59 HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 118
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
I + ++ R L Y+HS + H D+K +N+LL KI DF +
Sbjct: 119 LSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLAR 170
Query: 130 SRAIDRTH--LTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKPI 181
D H T+ T Y P+ +S+ +T+ D++S +L E+ +PI
Sbjct: 171 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 225
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 50 LLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKS 109
L+V E + G L+ I ++ D T I + + YLHS+ I H D+K
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAF--TEREASEIMKSIGEAIQYLHSIN---IAHRDVKP 150
Query: 110 ANILLVDKYQA---KISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVY 166
N+L K K++DF F LTT + YV P+ ++ + D++
Sbjct: 151 ENLLYTSKRPNAILKLTDF-GFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 208
Query: 167 SFSVVL 172
S V++
Sbjct: 209 SLGVIM 214
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 15/175 (8%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKI----LGCCLETEVPLLVYEFIPNGSLYQYIHEQT 69
H++ ++ + E+ IL + H N++ I +E + + + + LY+ + Q
Sbjct: 63 HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 122
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
I + ++ R L Y+HS + H D+K +N+LL KI DF +
Sbjct: 123 LSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLAR 174
Query: 130 SRAIDRTH--LTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKPI 181
D H T+ T Y P+ +S+ +T+ D++S +L E+ +PI
Sbjct: 175 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 229
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P +L ++ + E
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMEL 110
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 111 MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 171 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P +L ++ + E
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMEL 111
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 112 MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 171
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 172 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 219
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL 81
+ E+ +L ++ H+N+V++ + LV+EF + L +Y D P E+
Sbjct: 49 LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDP---EIVK 104
Query: 82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQ 141
++ + L + HS + H D+K N+L+ + K++DF ++ I + +
Sbjct: 105 SFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAE 161
Query: 142 VKVTFGYVDPK-YFRSSQFTEKSDVYSFSVVLVEL-NWTKPI 181
V VT Y P F + ++ D++S + EL N +P+
Sbjct: 162 V-VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P +L ++ + E
Sbjct: 62 NQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMEL 109
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 110 MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 169
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 170 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 217
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 50 LLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKS 109
L+V E + G L+ I ++ D T I + + YLHS+ I H D+K
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQAF--TEREASEIMKSIGEAIQYLHSIN---IAHRDVKP 149
Query: 110 ANILLVDKYQA---KISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVY 166
N+L K K++DF F LTT + YV P+ ++ + D++
Sbjct: 150 ENLLYTSKRPNAILKLTDF-GFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 207
Query: 167 SFSVVL 172
S V++
Sbjct: 208 SLGVIM 213
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 15/175 (8%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKI----LGCCLETEVPLLVYEFIPNGSLYQYIHEQT 69
H++ ++ + E+ IL + H N++ I +E + + + + LY+ + Q
Sbjct: 65 HQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 124
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
I + ++ R L Y+HS + H D+K +N+LL KI DF +
Sbjct: 125 LSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLAR 176
Query: 130 SRAIDRTH--LTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKPI 181
D H T+ T Y P+ +S+ +T+ D++S +L E+ +PI
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 11 KSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD 70
K+ S++ + E+ L + H+++ ++ +V E+ P G L+ YI Q
Sbjct: 45 KNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQ-- 102
Query: 71 DQLPITWEMRLRITV-EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR-TF 128
D+L E R+ ++ ++Y+HS H D+K N+L + ++ K+ DF
Sbjct: 103 DRLS---EEETRVVFRQIVSAVAYVHSQGYA---HRDLKPENLLFDEYHKLKLIDFGLCA 156
Query: 129 KSRAIDRTHLTTQVKVTFGYVDPKYFRS-SQFTEKSDVYSFSVVL 172
K + HL T + Y P+ + S ++DV+S ++L
Sbjct: 157 KPKGNKDYHLQTCCG-SLAYAAPELIQGKSYLGSEADVWSMGILL 200
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Query: 8 KKSKSVHESNVEQFINEVVILSQINHRNVVKI----LGCCLETEVPLLVYEFIPNGSLYQ 63
K S H++ ++ + E+ IL + H N++ I +E + + + + LY+
Sbjct: 55 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 114
Query: 64 YIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
+ Q I + ++ R L Y+HS + H D+K +N+LL KI
Sbjct: 115 LLKTQHLSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKIC 166
Query: 124 DFRTFKSRAIDRTH--LTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKP 180
DF + D H T+ T Y P+ +S+ +T+ D++S +L E+ +P
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 181 I 181
I
Sbjct: 227 I 227
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 15/175 (8%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKI----LGCCLETEVPLLVYEFIPNGSLYQYIHEQT 69
H++ ++ + E+ IL + H N++ I +E + + + + LY+ + Q
Sbjct: 61 HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 120
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
I + ++ R L Y+HS + H D+K +N+LL KI DF +
Sbjct: 121 LSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLAR 172
Query: 130 SRAIDRTH--LTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKPI 181
D H T+ T Y P+ +S+ +T+ D++S +L E+ +PI
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 14/175 (8%)
Query: 12 SVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDD 71
S + + EV +L +++H N++K+ ++ +V E G L+ I ++
Sbjct: 59 SAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-- 116
Query: 72 QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA---KISDFRTF 128
+ RI +V ++Y+H I H D+K NILL K + KI DF
Sbjct: 117 --RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDF-GL 170
Query: 129 KSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVL-VELNWTKPIH 182
+ T + ++ + Y+ P+ R + + EK DV+S V+L + L+ T P +
Sbjct: 171 STCFQQNTKMKDRIGTAY-YIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFY 223
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 50 LLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKS 109
L+V E + G L+ I ++ D T I + + YLHS I I H D+K
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAF--TEREASEIMKSIGEAIQYLHS---INIAHRDVKP 145
Query: 110 ANILLVDKYQA---KISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVY 166
N+L K K++DF F LTT + YV P+ ++ + D++
Sbjct: 146 ENLLYTSKRPNAILKLTDF-GFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 203
Query: 167 SFSVVL 172
S V++
Sbjct: 204 SLGVIM 209
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 14/175 (8%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
LL K + + S+ F E I++ N VV++ + +V E++P G L +
Sbjct: 106 LLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL---V 162
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
+ ++ +P W R T EV L +HS+ I H D+K N+LL K++DF
Sbjct: 163 NLMSNYDVPEKW-ARF-YTAEVVLALDAIHSMGFI---HRDVKPDNMLLDKSGHLKLADF 217
Query: 126 RT-FKSRAIDRTHLTTQVKVTFGYVDPKYFRS----SQFTEKSDVYSFSVVLVEL 175
T K T V T Y+ P+ +S + + D +S V L E+
Sbjct: 218 GTCMKMNKEGMVRCDTAVG-TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 271
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P +L ++ + E
Sbjct: 101 NQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMEL 148
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 149 MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 208
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 209 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P +L ++ + E
Sbjct: 101 NQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMEL 148
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 149 MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 208
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + T VT Y P+ + E D++S ++ E+
Sbjct: 209 GL--ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 14/175 (8%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
LL K + + S+ F E I++ N VV++ + +V E++P G L +
Sbjct: 101 LLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL---V 157
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
+ ++ +P W R T EV L +HS+ I H D+K N+LL K++DF
Sbjct: 158 NLMSNYDVPEKW-ARF-YTAEVVLALDAIHSMGFI---HRDVKPDNMLLDKSGHLKLADF 212
Query: 126 RT-FKSRAIDRTHLTTQVKVTFGYVDPKYFRS----SQFTEKSDVYSFSVVLVEL 175
T K T V T Y+ P+ +S + + D +S V L E+
Sbjct: 213 GTCMKMNKEGMVRCDTAVG-TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 266
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 14/175 (8%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
LL K + + S+ F E I++ N VV++ + +V E++P G L +
Sbjct: 106 LLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL---V 162
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
+ ++ +P W R T EV L +HS+ I H D+K N+LL K++DF
Sbjct: 163 NLMSNYDVPEKW-ARF-YTAEVVLALDAIHSMGFI---HRDVKPDNMLLDKSGHLKLADF 217
Query: 126 RT-FKSRAIDRTHLTTQVKVTFGYVDPKYFRS----SQFTEKSDVYSFSVVLVEL 175
T K T V T Y+ P+ +S + + D +S V L E+
Sbjct: 218 GTCMKMNKEGMVRCDTAVG-TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 271
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 15/162 (9%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD-DQL 73
E+N ++ I + + H N+VK+ + LV E + G L++ I ++ +
Sbjct: 49 EANTQKEITALKLCE--GHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSET 106
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDK---YQAKISDFRTFKS 130
++ MR ++ +S++H V + H D+K N+L D+ + KI DF +
Sbjct: 107 EASYIMRKLVSA-----VSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158
Query: 131 RAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVL 172
+ D L T T Y P+ + + E D++S V+L
Sbjct: 159 KPPDNQPLKTPC-FTLHYAAPELLNQNGYDESCDLWSLGVIL 199
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 24 EVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLR 82
E IL Q+ H +++ ++ + LV++ + G L+ Y+ E+ + ++ +
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK----VALSEKETRS 204
Query: 83 ITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQV 142
I + +S+LH+ I H D+K NILL D Q ++SDF S ++ ++
Sbjct: 205 IMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGF--SCHLEPGEKLREL 259
Query: 143 KVTFGYVDPKYFRSSQ------FTEKSDVYSFSVVLVELNWTKP 180
T GY+ P+ + S + ++ D+++ V+L L P
Sbjct: 260 CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSP 303
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 15/171 (8%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLY-QY 64
++KKS SN ++EV +L Q++H N++K+ + LV E G L+ +
Sbjct: 53 IIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI 112
Query: 65 IHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
I Q ++ M+ +V +YLH I H D+K N+LL K + +
Sbjct: 113 ILRQKFSEVDAAVIMK-----QVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIK 164
Query: 125 FRTFKSRAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVVL 172
F A + ++K G Y+ P+ R ++ EK DV+S V+L
Sbjct: 165 IVDFGLSA--HFEVGGKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVIL 212
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCL------ETEVPLLVYEFIPNGSLYQYIHE 67
++++ ++ E+V+L +NH+N++ +L E + LV E + + +L Q IH
Sbjct: 63 NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHM 121
Query: 68 QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRT 127
+ D + R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 122 ELDHE---------RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
Query: 128 FKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + T VT Y P+ + D++S ++ EL
Sbjct: 173 --ARTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGEL 218
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 15/171 (8%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
++KKS SN ++EV +L Q++H N++K+ + LV E G L+
Sbjct: 36 IIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELF--- 92
Query: 66 HEQTDDQLPITWEM-RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
D++ + + + V + +VLS + I H D+K N+LL K + +
Sbjct: 93 -----DEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIK 147
Query: 125 FRTFKSRAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVVL 172
F A + ++K G Y+ P+ R ++ EK DV+S V+L
Sbjct: 148 IVDFGLSA--HFEVGGKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVIL 195
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 15/175 (8%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKI----LGCCLETEVPLLVYEFIPNGSLYQYIHEQT 69
H++ ++ + E+ IL H N++ I +E + + + + LY+ + Q
Sbjct: 63 HQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 122
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
I + ++ R L Y+HS + H D+K +N+LL KI DF +
Sbjct: 123 LSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLAR 174
Query: 130 SRAIDRTH--LTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKPI 181
D H T+ T Y P+ +S+ +T+ D++S +L E+ +PI
Sbjct: 175 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 229
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 28/186 (15%)
Query: 60 SLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ 119
SL ++ + D I ++ +I V + + L +LHS S+ H D+K +N+L+ Q
Sbjct: 91 SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV--IHRDVKPSNVLINALGQ 148
Query: 120 AKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKY----FRSSQFTEKSDVYSFSVVLVEL 175
K+ DF +D Y+ P+ ++ KSD++S + ++EL
Sbjct: 149 VKMCDF-GISGYLVDDVAKDIDAGCK-PYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
Query: 176 --------NWTKPI----HLVDVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQ 223
+W P +V+ + A FS E F +CL N K++
Sbjct: 207 AILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAE--------FVDFTSQCLKKNSKER 258
Query: 224 PTMKEV 229
PT E+
Sbjct: 259 PTYPEL 264
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Query: 8 KKSKSVHESNVEQFINEVVILSQINHRNVVKI----LGCCLETEVPLLVYEFIPNGSLYQ 63
K S H++ ++ + E+ IL + H N++ I +E + + + + LY+
Sbjct: 59 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 118
Query: 64 YIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
+ Q I + ++ R L Y+HS + H D+K +N+LL KI
Sbjct: 119 LLKCQHLSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKIC 170
Query: 124 DFRTFKSRAIDRTH--LTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKP 180
DF + D H T+ T Y P+ +S+ +T+ D++S +L E+ +P
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 181 I 181
I
Sbjct: 231 I 231
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 15/175 (8%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKI----LGCCLETEVPLLVYEFIPNGSLYQYIHEQT 69
H++ ++ + E+ IL H N++ I +E + + + + LY+ + Q
Sbjct: 63 HQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 122
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
I + ++ R L Y+HS + H D+K +N+LL KI DF +
Sbjct: 123 LSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLAR 174
Query: 130 SRAIDRTH--LTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKPI 181
D H T+ T Y P+ +S+ +T+ D++S +L E+ +PI
Sbjct: 175 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 229
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+ +
Sbjct: 50 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLI 105
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
++ + LS+ HS + H D+K N+L+ + K++DF ++ + T
Sbjct: 106 KSYLFQLLQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 163 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 14/175 (8%)
Query: 12 SVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDD 71
S + + EV +L +++H N++K+ ++ +V E G L+ I ++
Sbjct: 59 SAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-- 116
Query: 72 QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ---AKISDFRTF 128
+ RI +V ++Y+H I H D+K NILL K + KI DF
Sbjct: 117 --RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDF-GL 170
Query: 129 KSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVL-VELNWTKPIH 182
+ T + ++ + Y+ P+ R + + EK DV+S V+L + L+ T P +
Sbjct: 171 STCFQQNTKMKDRIGTAY-YIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFY 223
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 76/170 (44%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P SL ++ + E
Sbjct: 65 NQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMEL 112
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 113 MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 172
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + VT Y P+ + E D++S ++ E+
Sbjct: 173 GL--ARTAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 220
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 14/175 (8%)
Query: 12 SVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDD 71
S + + EV +L +++H N++K+ ++ +V E G L+ I ++
Sbjct: 59 SAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-- 116
Query: 72 QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ---AKISDFRTF 128
+ RI +V ++Y+H I H D+K NILL K + KI DF
Sbjct: 117 --RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDF-GL 170
Query: 129 KSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVL-VELNWTKPIH 182
+ T + ++ + Y+ P+ R + + EK DV+S V+L + L+ T P +
Sbjct: 171 STCFQQNTKMKDRIGTAY-YIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFY 223
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E+ P G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+++ + +++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLMIDQQGYIQVTDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 186 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 74/177 (41%), Gaps = 37/177 (20%)
Query: 24 EVVILSQINHRNVVKIL-----GCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E+ + H N+++ + G LE E+ L+ F GSL Y+ ITW
Sbjct: 59 EIFSTPGMKHENLLQFIAAEKRGSNLEVEL-WLITAFHDKGSLTDYLKGNI-----ITWN 112
Query: 79 MRLRITVEVSRVLSYLHSVASIP----------IYHLDIKSANILLVDKYQAKISDF--- 125
+ +SR LSYLH +P I H D KS N+LL A ++DF
Sbjct: 113 ELCHVAETMSRGLSYLHE--DVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA 170
Query: 126 -RTFKSRAIDRTHLTTQVKVTFGYVDPKY------FRSSQFTEKSDVYSFSVVLVEL 175
R + TH QV T Y+ P+ F+ F + D+Y+ +VL EL
Sbjct: 171 VRFEPGKPPGDTH--GQVG-TRRYMAPEVLEGAINFQRDAFL-RIDMYAMGLVLWEL 223
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N + K+ + +V E+ P G ++ ++
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL 133
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+++ + K++DF
Sbjct: 134 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLMIDQQGYIKVTDF 186
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 187 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N + K+ + +V E+ P G ++ ++
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL 133
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+++ + K++DF
Sbjct: 134 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLMIDQQGYIKVTDF 186
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 187 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 76/181 (41%), Gaps = 13/181 (7%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N + K+ + +V E+ P G ++ ++
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL 133
Query: 66 HEQTDDQLPITWEMRLRI-TVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
++ E R ++ YLHS+ I + D+K N+++ + K++D
Sbjct: 134 R-----RIGRFXEPHARFYAAQIVLTFEYLHSLDLI---YRDLKPENLMIDQQGYIKVTD 185
Query: 125 FRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLV 184
F F R RT T Y+ P+ S + + D ++ V++ E+ P
Sbjct: 186 F-GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Query: 185 D 185
D
Sbjct: 242 D 242
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 74/180 (41%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE I +N +VK+ + +V E+ P G ++ ++
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHL 133
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + K++DF
Sbjct: 134 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIKVADF 186
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 187 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 52/125 (41%), Gaps = 10/125 (8%)
Query: 50 LLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKS 109
L+V E + G L+ I ++ D T I + + YLHS I I H D+K
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAF--TEREASEIXKSIGEAIQYLHS---INIAHRDVKP 189
Query: 110 ANILLVDKYQA---KISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVY 166
N+L K K++DF F LTT + YV P+ ++ + D +
Sbjct: 190 ENLLYTSKRPNAILKLTDF-GFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDXW 247
Query: 167 SFSVV 171
S V+
Sbjct: 248 SLGVI 252
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 50 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL--- 104
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ + T
Sbjct: 105 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 163 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 76/170 (44%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P SL ++ + E
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMEL 110
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 111 MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + VT Y P+ + E D++S ++ E+
Sbjct: 171 GL--ARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 50 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL--- 104
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ + T
Sbjct: 105 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 163 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 49 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL--- 103
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ + T
Sbjct: 104 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 161
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 162 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 54 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL--- 108
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ + T
Sbjct: 109 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 166
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 167 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 57 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL--- 111
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ + T
Sbjct: 112 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 169
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 170 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 204
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 49 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL--- 103
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ + T
Sbjct: 104 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 161
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 162 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 50 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL--- 104
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ + T
Sbjct: 105 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 163 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 49 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL--- 103
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ + T
Sbjct: 104 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 161
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 162 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 19/181 (10%)
Query: 61 LYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA 120
Y+Y++ DD +P E+ +IT+ + L++L ++ I H DIK +NILL
Sbjct: 110 FYKYVYSVLDDVIP--EEILGKITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNI 165
Query: 121 KISDFRTFKSRAIDRTHLTTQVK----VTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL- 175
K+ DF + +D T + +DP R + +SDV+S + L EL
Sbjct: 166 KLCDF-GISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQG-YDVRSDVWSLGITLYELA 223
Query: 176 -------NWTKPIHLVDVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKE 228
W + + + S E+E +F CL + K+P KE
Sbjct: 224 TGRFPYPKWNSVFDQL-TQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKE 282
Query: 229 V 229
+
Sbjct: 283 L 283
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 51 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL--- 105
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ + T
Sbjct: 106 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 163
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 164 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 25/163 (15%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQ---TDDQLPI 75
E+ EV IL +I H N++ + +L+ E + G L+ ++ E+ T+D+
Sbjct: 53 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDE--- 109
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY----QAKISDFRTFKSR 131
T + ++L +H + S I H D+K NI+L+DK + K+ DF
Sbjct: 110 -------ATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI---- 158
Query: 132 AIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVV 171
+ + K FG +V P+ ++D++S V+
Sbjct: 159 -AHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 200
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL 81
I E+ +L ++NH N+VK+L LV+EF+ + L +++ +P+
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL---- 104
Query: 82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQ 141
I + ++L L S + H D+K N+L+ + K++DF ++ + T +
Sbjct: 105 -IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 163
Query: 142 VKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
V VT Y P+ ++ + D++S + E+
Sbjct: 164 V-VTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEM 197
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++ G ++ ++
Sbjct: 60 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 119
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ ++ +++DF
Sbjct: 120 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDEQGYIQVTDF 172
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 173 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 228
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 15/175 (8%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKI----LGCCLETEVPLLVYEFIPNGSLYQYIHEQT 69
H++ ++ + E+ IL + H N++ I +E + + + + LY+ + Q
Sbjct: 65 HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 124
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
I + ++ R L Y+HS + H D+K +N+LL KI DF +
Sbjct: 125 LSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLAR 176
Query: 130 SRAIDRTH--LTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKPI 181
D H + T Y P+ +S+ +T+ D++S +L E+ +PI
Sbjct: 177 VADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 15/175 (8%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKI----LGCCLETEVPLLVYEFIPNGSLYQYIHEQT 69
H++ ++ + E+ IL + H N++ I +E + + + + LY+ + Q
Sbjct: 66 HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 125
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
I + ++ R L Y+HS + H D+K +N+LL KI DF +
Sbjct: 126 LSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLAR 177
Query: 130 SRAIDRTH--LTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKPI 181
D H + T Y P+ +S+ +T+ D++S +L E+ +PI
Sbjct: 178 VADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 232
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL 81
I E+ +L ++NH N+VK+L LV+EF+ + L +++ +P+
Sbjct: 57 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL---- 111
Query: 82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQ 141
I + ++L L S + H D+K N+L+ + K++DF ++ + T +
Sbjct: 112 -IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 170
Query: 142 VKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
V VT Y P+ ++ + D++S + E+
Sbjct: 171 V-VTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEM 204
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 25/163 (15%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQ---TDDQLPI 75
E+ EV IL +I H N++ + +L+ E + G L+ ++ E+ T+D+
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDE--- 130
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY----QAKISDFRTFKSR 131
T + ++L +H + S I H D+K NI+L+DK + K+ DF
Sbjct: 131 -------ATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI---- 179
Query: 132 AIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVV 171
+ + K FG +V P+ ++D++S V+
Sbjct: 180 -AHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 221
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 15/167 (8%)
Query: 8 KKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHE 67
KK+ ES++E NE+ +L +I H N+V + LV + + G L+ I E
Sbjct: 57 KKALKGKESSIE---NEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVE 113
Query: 68 QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK---ISD 124
+ + + + +VL ++ + + I H D+K N+L + + ISD
Sbjct: 114 K-------GFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISD 166
Query: 125 FRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVV 171
F S+ + + + T GYV P+ +++ D +S V+
Sbjct: 167 FGL--SKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 211
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 25/163 (15%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQ---TDDQLPI 75
E+ EV IL +I H N++ + +L+ E + G L+ ++ E+ T+D+
Sbjct: 60 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDE--- 116
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY----QAKISDFRTFKSR 131
T + ++L +H + S I H D+K NI+L+DK + K+ DF
Sbjct: 117 -------ATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI---- 165
Query: 132 AIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVV 171
+ + K FG +V P+ ++D++S V+
Sbjct: 166 -AHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E+ P G ++ ++
Sbjct: 73 ILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+++ + K++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLMIDQQGYIKVTDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
K R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 186 GLAK-RVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++ G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R R T + T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 186 -GFAKRVKGR---TWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 10/177 (5%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL 81
I E+ +L +++H N+V ++ LV+EF+ L + + E T
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENK------TGLQDS 119
Query: 82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQ 141
+I + + ++L + I H D+K N+L+ K++DF ++ I T +
Sbjct: 120 QIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHE 179
Query: 142 VKVTFGYVDPKYFRSS-QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS 197
V VT Y P S +++ D++S + E+ KP+ V ++ L FS
Sbjct: 180 V-VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPL-FPGVTDDDQLPKIFS 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++ G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R R T + T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 186 -GFAKRVKGR---TWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 10/177 (5%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL 81
I E+ +L +++H N+V ++ LV+EF+ L + + E T
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENK------TGLQDS 119
Query: 82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQ 141
+I + + ++L + I H D+K N+L+ K++DF ++ I T +
Sbjct: 120 QIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHE 179
Query: 142 VKVTFGYVDPKYFRSS-QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS 197
V VT Y P S +++ D++S + E+ KP+ V ++ L FS
Sbjct: 180 V-VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPL-FPGVTDDDQLPKIFS 234
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 10/126 (7%)
Query: 50 LLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKS 109
L+V E + G L+ I ++ D T I + + YLHS I I H D+K
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAF--TEREASEIMKSIGEAIQYLHS---INIAHRDVKP 143
Query: 110 ANILLVDKYQA---KISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVY 166
N+L K K++DF F LT + YV P+ ++ + D++
Sbjct: 144 ENLLYTSKRPNAILKLTDF-GFAKETTSHNSLTEPCYTPY-YVAPEVLGPEKYDKSCDMW 201
Query: 167 SFSVVL 172
S V++
Sbjct: 202 SLGVIM 207
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 76/170 (44%), Gaps = 22/170 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-----IHEQ 68
++++ ++ E+V++ +NH+N++ +L F P SL ++ + E
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMEL 110
Query: 69 TDDQLPITWEMRL---RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
D L +M L R++ + ++L + + S I H D+K +NI++ KI DF
Sbjct: 111 MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+R + + VT Y P+ + E D++S ++ E+
Sbjct: 171 GL--ARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEM 218
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 13/181 (7%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++ G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRI-TVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
++ E R ++ YLHS+ I + D+K N+L+ + +++D
Sbjct: 133 R-----RIGRFXEPHARFYAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTD 184
Query: 125 FRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLV 184
F F R RT T Y+ P+ S + + D ++ V++ E+ P
Sbjct: 185 F-GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 185 D 185
D
Sbjct: 241 D 241
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++ G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 186 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL 81
+ E+ +L ++ H+N+V++ + LV+EF + L +Y D P E+
Sbjct: 49 LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDP---EIVK 104
Query: 82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQ 141
++ + L + HS + H D+K N+L+ + K+++F ++ I + +
Sbjct: 105 SFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE 161
Query: 142 VKVTFGYVDPK-YFRSSQFTEKSDVYSFSVVLVEL-NWTKPI 181
V VT Y P F + ++ D++S + EL N +P+
Sbjct: 162 V-VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++ G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 186 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 13/181 (7%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++ G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRI-TVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
++ E R ++ YLHS+ I + D+K N+L+ + +++D
Sbjct: 133 R-----RIGRFXEPHARFYAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTD 184
Query: 125 FRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLV 184
F F R RT T Y+ P+ S + + D ++ V++ E+ P
Sbjct: 185 F-GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 185 D 185
D
Sbjct: 241 D 241
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++ G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 186 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++ G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 186 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++ G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 186 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 21/168 (12%)
Query: 12 SVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLY-QYIHEQTD 70
SV S+ + + EV +L ++H N++K+ + LV E G L+ + IH
Sbjct: 74 SVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKF 133
Query: 71 DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA---KISDFR- 126
+++ V + +VLS + + I H D+K N+LL K + KI DF
Sbjct: 134 NEVDAA--------VIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGL 185
Query: 127 --TFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVL 172
F+++ + L T Y+ P+ R ++ EK DV+S V+L
Sbjct: 186 SAVFENQKKMKERLGTAY-----YIAPEVLR-KKYDEKCDVWSIGVIL 227
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++ G ++ ++
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 133
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 134 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 186
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 187 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++ G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 133 RRIGRFAEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 186 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++ G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 186 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 13/181 (7%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++ G ++ ++
Sbjct: 68 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 127
Query: 66 HEQTDDQLPITWEMRLRI-TVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
++ E R ++ YLHS+ I + D+K N+L+ + +++D
Sbjct: 128 R-----RIGRFXEPHARFYAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTD 179
Query: 125 FRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLV 184
F F R RT T Y+ P+ S + + D ++ V++ E+ P
Sbjct: 180 F-GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 235
Query: 185 D 185
D
Sbjct: 236 D 236
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 13/181 (7%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++ G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRI-TVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
++ E R ++ YLHS+ I + D+K N+L+ + +++D
Sbjct: 133 R-----RIGRFXEPHARFYAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTD 184
Query: 125 FRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLV 184
F F R RT T Y+ P+ S + + D ++ V++ E+ P
Sbjct: 185 F-GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 185 D 185
D
Sbjct: 241 D 241
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 13/181 (7%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++ G ++ ++
Sbjct: 94 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 153
Query: 66 HEQTDDQLPITWEMRLRI-TVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
++ E R ++ YLHS+ I + D+K N+L+ + +++D
Sbjct: 154 R-----RIGRFXEPHARFYAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTD 205
Query: 125 FRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLV 184
F F R RT T Y+ P+ S + + D ++ V++ E+ P
Sbjct: 206 F-GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 261
Query: 185 D 185
D
Sbjct: 262 D 262
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 15/164 (9%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL 81
I E+ IL ++ H N+VK+ + +LV+E + +Q +L E L
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL----------DQDLKKLLDVCEGGL 97
Query: 82 RITVEVSRVLSYLHSVASI---PIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
S +L L+ +A + H D+K N+L+ + + KI+DF ++ I
Sbjct: 98 ESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157
Query: 139 TTQVKVTFGYVDPKYFRSS-QFTEKSDVYSFSVVLVELNWTKPI 181
T +V VT Y P S +++ D++S + E+ P+
Sbjct: 158 THEV-VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPL 200
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 19 EQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
E + EV IL ++ H N++++ LV++ + G L+ Y+ E+ + ++
Sbjct: 55 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK----VTLSE 110
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ +I + V+ LH + I H D+K NILL D K++DF S +D
Sbjct: 111 KETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGF--SCQLDPGE 165
Query: 138 LTTQVKVTFGYVDPKYFRSSQ------FTEKSDVYSFSVVLVELNWTKP 180
+V T Y+ P+ S + ++ D++S V++ L P
Sbjct: 166 KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 214
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++ G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P S + + D ++ V++ E+ P D
Sbjct: 186 -GFAKRVKGRTWXLCG---TPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 19 EQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
E + EV IL ++ H N++++ LV++ + G L+ Y+ E+ + ++
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK----VTLSE 123
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ +I + V+ LH + I H D+K NILL D K++DF S +D
Sbjct: 124 KETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGF--SCQLDPGE 178
Query: 138 LTTQVKVTFGYVDPKYFRSSQ------FTEKSDVYSFSVVLVELNWTKP 180
+V T Y+ P+ S + ++ D++S V++ L P
Sbjct: 179 KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 227
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 15/164 (9%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL 81
I E+ IL ++ H N+VK+ + +LV+E + +Q +L E L
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL----------DQDLKKLLDVCEGGL 97
Query: 82 RITVEVSRVLSYLHSVASI---PIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
S +L L+ +A + H D+K N+L+ + + KI+DF ++ I
Sbjct: 98 ESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157
Query: 139 TTQVKVTFGYVDPKYFRSS-QFTEKSDVYSFSVVLVELNWTKPI 181
T +V VT Y P S +++ D++S + E+ P+
Sbjct: 158 THEV-VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPL 200
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 13/189 (6%)
Query: 6 LLKKSKSVHES-NVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQ 63
+LKK+ V ++ E E +L I + L +TE L L+ ++I G L+
Sbjct: 89 VLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFT 148
Query: 64 YIHEQTDDQLPITWEMRLRITV-EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKI 122
++ Q E ++I V E+ L +LH + I + DIK NILL +
Sbjct: 149 HL-----SQRERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVL 200
Query: 123 SDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRS--SQFTEKSDVYSFSVVLVELNWTKP 180
+DF K D T T Y+ P R S + D +S V++ EL
Sbjct: 201 TDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGAS 260
Query: 181 IHLVDVEEN 189
VD E+N
Sbjct: 261 PFTVDGEKN 269
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 75/171 (43%), Gaps = 22/171 (12%)
Query: 10 SKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI---- 65
+K + + ++ E I ++ H N+V++ E LV++ + G L++ I
Sbjct: 41 TKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE 100
Query: 66 -HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA---K 121
+ + D I ++ ++Y HS I H ++K N+LL K + K
Sbjct: 101 FYSEADASHCIQ---------QILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVK 148
Query: 122 ISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVL 172
++DF + ++ + T GY+ P+ + +++ D+++ V+L
Sbjct: 149 LADFGL--AIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E+ P G ++ ++
Sbjct: 73 ILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+++ + +++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLMIDQQGYIQVTDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
K R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 186 GLAK-RVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 71/172 (41%), Gaps = 31/172 (18%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPLLVYEFI-----------PNGSLYQYIHEQTD 70
+ E+ +L Q+ H N+V +L C + + LV+EF+ PNG YQ +
Sbjct: 72 MREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQ---- 127
Query: 71 DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS 130
+ ++ + + HS I H DIK NIL+ K+ DF ++
Sbjct: 128 -----------KYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFART 173
Query: 131 RAIDRTHLTTQVKVTFGYVDPKYFRSS-QFTEKSDVYSFSVVLVELNWTKPI 181
A +V + Y P+ ++ + DV++ ++ E+ +P+
Sbjct: 174 LAAPGEVYDDEVATRW-YRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPL 224
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 75/171 (43%), Gaps = 22/171 (12%)
Query: 10 SKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI---- 65
+K + + ++ E I ++ H N+V++ E LV++ + G L++ I
Sbjct: 64 TKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE 123
Query: 66 -HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA---K 121
+ + D I ++ ++Y HS I H ++K N+LL K + K
Sbjct: 124 FYSEADASHCIQ---------QILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVK 171
Query: 122 ISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVL 172
++DF + ++ + T GY+ P+ + +++ D+++ V+L
Sbjct: 172 LADFGL--AIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 220
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 75/171 (43%), Gaps = 22/171 (12%)
Query: 10 SKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI---- 65
+K + + ++ E I ++ H N+V++ E LV++ + G L++ I
Sbjct: 40 TKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE 99
Query: 66 -HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA---K 121
+ + D I ++ ++Y HS I H ++K N+LL K + K
Sbjct: 100 FYSEADASHCIQ---------QILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVK 147
Query: 122 ISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVL 172
++DF + ++ + T GY+ P+ + +++ D+++ V+L
Sbjct: 148 LADFGL--AIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 196
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 75/171 (43%), Gaps = 22/171 (12%)
Query: 10 SKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI---- 65
+K + + ++ E I ++ H N+V++ E LV++ + G L++ I
Sbjct: 41 TKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE 100
Query: 66 -HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA---K 121
+ + D I ++ ++Y HS I H ++K N+LL K + K
Sbjct: 101 FYSEADASHCIQ---------QILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVK 148
Query: 122 ISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVL 172
++DF + ++ + T GY+ P+ + +++ D+++ V+L
Sbjct: 149 LADFGL--AIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 74/186 (39%), Gaps = 28/186 (15%)
Query: 60 SLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ 119
SL ++ + D I ++ +I V + + L +LHS S+ H D+K +N+L+ Q
Sbjct: 118 SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV--IHRDVKPSNVLINALGQ 175
Query: 120 AKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKY----FRSSQFTEKSDVYSFSVVLVEL 175
K DF +D Y P+ ++ KSD++S + +EL
Sbjct: 176 VKXCDF-GISGYLVDDVAKDIDAGCK-PYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
Query: 176 --------NWTKPI----HLVDVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQ 223
+W P +V+ + A FS E F +CL N K++
Sbjct: 234 AILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAE--------FVDFTSQCLKKNSKER 285
Query: 224 PTMKEV 229
PT E+
Sbjct: 286 PTYPEL 291
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEV--PLLVYEFIPNGSLYQYIHEQTDD-QLPITWE 78
+ E +L ++NH+N+VK+ ET +L+ EF P GSLY + E ++ LP +
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPES-- 112
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA----KISDF 125
+ + V+ ++ + I H +IK NI+ V K++DF
Sbjct: 113 ---EFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 15/164 (9%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL 81
I E+ IL ++ H N+VK+ + +LV+E + +Q +L E L
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL----------DQDLKKLLDVCEGGL 97
Query: 82 RITVEVSRVLSYLHSVASI---PIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
S +L L+ +A + H D+K N+L+ + + KI+DF ++ I
Sbjct: 98 ESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157
Query: 139 TTQVKVTFGYVDPKYFRSS-QFTEKSDVYSFSVVLVELNWTKPI 181
T ++ VT Y P S +++ D++S + E+ P+
Sbjct: 158 THEI-VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPL 200
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 31/184 (16%)
Query: 19 EQFIN-EVVILSQINHRNVVKIL-----GCCLETEVPL-LVYEFIPNGSLYQYI--HEQT 69
++F N E+ I+ +++H N+V++ + EV L LV +++P ++Y+ + +
Sbjct: 95 KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA 153
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL-VDKYQAKISDFRTF 128
LP+ + ++L + ++ R L+Y+HS I H DIK N+LL D K+ DF +
Sbjct: 154 KQTLPVIY-VKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSA 208
Query: 129 KSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVELNWTKPI 181
K +++ Y+ +Y+R+ + +T DV+S VL EL +PI
Sbjct: 209 KQLVRGEPNVS--------YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 260
Query: 182 HLVD 185
D
Sbjct: 261 FPGD 264
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 50 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL--- 104
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ +
Sbjct: 105 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 162
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 163 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 30/178 (16%)
Query: 24 EVVILSQINHRNVVKILGCCLET-----EVPL-LVYEFIPNGSLYQYI--HEQTDDQLPI 75
E+ I+ +++H N+V++ + EV L LV +++P ++Y+ + + LP+
Sbjct: 68 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 126
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL-VDKYQAKISDFRTFKSRAID 134
+ ++L + ++ R L+Y+HS I H DIK N+LL D K+ DF + K
Sbjct: 127 IY-VKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 181
Query: 135 RTHLTTQVKVTFGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVELNWTKPIHLVD 185
+++ Y+ +Y+R+ + +T DV+S VL EL +PI D
Sbjct: 182 EPNVS--------YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 231
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 50 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL--- 104
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ +
Sbjct: 105 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 162
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 163 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 49 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL--- 103
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ +
Sbjct: 104 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 161
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 162 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 31/184 (16%)
Query: 19 EQFIN-EVVILSQINHRNVVKILGCCLET-----EVPL-LVYEFIPNGSLYQYI--HEQT 69
++F N E+ I+ +++H N+V++ + EV L LV +++P ++Y+ + +
Sbjct: 136 KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA 194
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL-VDKYQAKISDFRTF 128
LP+ + ++L + ++ R L+Y+HS I H DIK N+LL D K+ DF +
Sbjct: 195 KQTLPVIY-VKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSA 249
Query: 129 KSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVELNWTKPI 181
K +++ Y+ +Y+R+ + +T DV+S VL EL +PI
Sbjct: 250 KQLVRGEPNVS--------YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 301
Query: 182 HLVD 185
D
Sbjct: 302 FPGD 305
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI 133
PIT E + + +V+R + +L S I H D+ + NILL + KI DF +
Sbjct: 195 PITMEDLISYSFQVARGMEFLSSRKCI---HRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 134 DRTHL-TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ ++ ++ ++ P+ ++ KSDV+S+ V+L E+
Sbjct: 252 NPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEI 294
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 16 SNVEQFINEVVILSQINHR-NVVKILGCCLETEVPLLV-YEFIPNGSLYQYIHEQTD 70
S + + E+ IL+ I H NVV +LG C + PL+V E+ G+L Y+ + D
Sbjct: 72 SEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRD 128
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 51 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL--- 105
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ +
Sbjct: 106 --IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH 163
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 164 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 50 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL--- 104
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ +
Sbjct: 105 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 162
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 163 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 51 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL--- 105
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ +
Sbjct: 106 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 163
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 164 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 51 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL--- 105
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ +
Sbjct: 106 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 163
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 164 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 50 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL--- 104
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ +
Sbjct: 105 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 162
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 163 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 49 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL--- 103
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ +
Sbjct: 104 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 161
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 162 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 30/178 (16%)
Query: 24 EVVILSQINHRNVVKILGCCLET-----EVPL-LVYEFIPNGSLYQYI--HEQTDDQLPI 75
E+ I+ +++H N+V++ + EV L LV +++P ++Y+ + + LP+
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 121
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL-VDKYQAKISDFRTFKSRAID 134
+ ++L + ++ R L+Y+HS I H DIK N+LL D K+ DF + K
Sbjct: 122 IY-VKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 135 RTHLTTQVKVTFGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVELNWTKPIHLVD 185
+++ Y+ +Y+R+ + +T DV+S VL EL +PI D
Sbjct: 177 EPNVS--------YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 52 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL--- 106
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ +
Sbjct: 107 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 164
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 165 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 199
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 31/184 (16%)
Query: 19 EQFIN-EVVILSQINHRNVVKILGCCLET-----EVPL-LVYEFIPNGSLYQYI--HEQT 69
++F N E+ I+ +++H N+V++ + EV L LV +++P ++Y+ + +
Sbjct: 93 KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA 151
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL-VDKYQAKISDFRTF 128
LP+ + ++L + ++ R L+Y+HS I H DIK N+LL D K+ DF +
Sbjct: 152 KQTLPVIY-VKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSA 206
Query: 129 KSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVELNWTKPI 181
K +++ Y+ +Y+R+ + +T DV+S VL EL +PI
Sbjct: 207 KQLVRGEPNVS--------YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 258
Query: 182 HLVD 185
D
Sbjct: 259 FPGD 262
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 53 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL--- 107
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ +
Sbjct: 108 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 166 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 52 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL--- 106
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ +
Sbjct: 107 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 164
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 165 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 199
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 53 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL--- 107
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ +
Sbjct: 108 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 166 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 52 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL--- 106
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ +
Sbjct: 107 --IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH 164
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 165 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 199
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 51 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPL--- 105
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ +
Sbjct: 106 --IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH 163
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 164 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++ G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ ++ P D
Sbjct: 186 -GFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFAD 241
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 54 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL--- 108
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ +
Sbjct: 109 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 166
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 167 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 201
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 18/172 (10%)
Query: 24 EVVILSQINHRNVVKILGCCLET-----EVPL-LVYEFIPNGSLYQYI--HEQTDDQLPI 75
E+ I+ +++H N+V++ + EV L LV +++P ++Y+ + + LP+
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPV 121
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL-VDKYQAKISDFRTFKSRAID 134
+ ++L + ++ R L+Y+HS I H DIK N+LL D K+ DF + K +
Sbjct: 122 IY-VKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ--LV 174
Query: 135 RTHLTTQVKVTFGYVDPKY-FRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
R + Y P+ F ++ +T DV+S VL EL +PI D
Sbjct: 175 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 30/178 (16%)
Query: 24 EVVILSQINHRNVVKILGCCLET-----EVPL-LVYEFIPNGSLYQYI--HEQTDDQLPI 75
E+ I+ +++H N+V++ + EV L LV +++P ++Y+ + + LP+
Sbjct: 91 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 149
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL-VDKYQAKISDFRTFKSRAID 134
+ ++L + ++ R L+Y+HS I H DIK N+LL D K+ DF + K
Sbjct: 150 IY-VKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 204
Query: 135 RTHLTTQVKVTFGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVELNWTKPIHLVD 185
+++ Y+ +Y+R+ + +T DV+S VL EL +PI D
Sbjct: 205 EPNVS--------YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 254
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 30/178 (16%)
Query: 24 EVVILSQINHRNVVKILGCCLET-----EVPL-LVYEFIPNGSLYQYI--HEQTDDQLPI 75
E+ I+ +++H N+V++ + EV L LV +++P ++Y+ + + LP+
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 121
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL-VDKYQAKISDFRTFKSRAID 134
+ ++L + ++ R L+Y+HS I H DIK N+LL D K+ DF + K
Sbjct: 122 IY-VKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 135 RTHLTTQVKVTFGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVELNWTKPIHLVD 185
+++ Y+ +Y+R+ + +T DV+S VL EL +PI D
Sbjct: 177 EPNVS--------YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 31/184 (16%)
Query: 19 EQFIN-EVVILSQINHRNVVKILGCCLET-----EVPL-LVYEFIPNGSLYQYI--HEQT 69
++F N E+ I+ +++H N+V++ + EV L LV +++P ++Y+ + +
Sbjct: 91 KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA 149
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL-VDKYQAKISDFRTF 128
LP+ + ++L + ++ R L+Y+HS I H DIK N+LL D K+ DF +
Sbjct: 150 KQTLPVIY-VKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSA 204
Query: 129 KSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVELNWTKPI 181
K +++ Y+ +Y+R+ + +T DV+S VL EL +PI
Sbjct: 205 KQLVRGEPNVS--------YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 256
Query: 182 HLVD 185
D
Sbjct: 257 FPGD 260
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L +++ +P+
Sbjct: 53 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPL--- 107
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ +
Sbjct: 108 --IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 166 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 16/169 (9%)
Query: 19 EQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
E + EV IL ++ H N++++ LV++ + G L+ Y+ E+ + ++
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK----VTLSE 123
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ +I + V+ LH + I H D+K NILL D K++DF S +D
Sbjct: 124 KETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGF--SCQLDPGE 178
Query: 138 LTTQVKVTFGYVDPKYFRSSQ------FTEKSDVYSFSVVLVELNWTKP 180
V T Y+ P+ S + ++ D++S V++ L P
Sbjct: 179 KLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 227
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++ G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+++ + +++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLIIDQQGYIQVTDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 186 -GFAKRVKGRTWXLCG---TPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 30/178 (16%)
Query: 24 EVVILSQINHRNVVKILGCCLET-----EVPL-LVYEFIPNGSLYQYI--HEQTDDQLPI 75
E+ I+ +++H N+V++ + EV L LV +++P ++Y+ + + LP+
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 121
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL-VDKYQAKISDFRTFKSRAID 134
+ ++L + ++ R L+Y+HS I H DIK N+LL D K+ DF + K
Sbjct: 122 IY-VKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 135 RTHLTTQVKVTFGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVELNWTKPIHLVD 185
+++ Y+ +Y+R+ + +T DV+S VL EL +PI D
Sbjct: 177 EPNVS--------YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 30/178 (16%)
Query: 24 EVVILSQINHRNVVKILGCCLET-----EVPL-LVYEFIPNGSLYQYI--HEQTDDQLPI 75
E+ I+ +++H N+V++ + EV L LV +++P ++Y+ + + LP+
Sbjct: 76 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 134
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL-VDKYQAKISDFRTFKSRAID 134
+ ++L + ++ R L+Y+HS I H DIK N+LL D K+ DF + K
Sbjct: 135 IY-VKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 189
Query: 135 RTHLTTQVKVTFGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVELNWTKPIHLVD 185
+++ Y+ +Y+R+ + +T DV+S VL EL +PI D
Sbjct: 190 EPNVS--------YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 239
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEV--PLLVYEFIPNGSLYQYIHEQTDD-QLPITWE 78
+ E +L ++NH+N+VK+ ET +L+ EF P GSLY + E ++ LP +
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPES-- 112
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA----KISDF 125
+ + V+ ++ + I H +IK NI+ V K++DF
Sbjct: 113 ---EFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 6/153 (3%)
Query: 24 EVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR-LR 82
E IL++++ R +V L ET+ L + I NG +Y D+ P E R +
Sbjct: 235 EKKILAKVHSRFIVS-LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 83 ITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQV 142
T ++ L +LH I + D+K N+LL D +ISD +T T
Sbjct: 294 YTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGY 349
Query: 143 KVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
T G++ P+ ++ D ++ V L E+
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEM 382
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 16/159 (10%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF +H+ D + +
Sbjct: 50 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKDFMDASALTG 99
Query: 81 LRITVEVSRVLSYLHSVA---SIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+ + + S + L +A S + H D+K N+L+ + K++DF ++ +
Sbjct: 100 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 138 LTTQVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 160 YXHEV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 18/172 (10%)
Query: 24 EVVILSQINHRNVVKILGCCLET-----EVPL-LVYEFIPNGSLYQYI--HEQTDDQLPI 75
E+ I+ +++H N+V++ + EV L LV +++P ++Y+ + + LP+
Sbjct: 75 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 133
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL-VDKYQAKISDFRTFKSRAID 134
+ ++L + ++ R L+Y+HS I H DIK N+LL D K+ DF + K +
Sbjct: 134 IY-VKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ--LV 186
Query: 135 RTHLTTQVKVTFGYVDPKY-FRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
R + Y P+ F ++ +T DV+S VL EL +PI D
Sbjct: 187 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 238
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 6/153 (3%)
Query: 24 EVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR-LR 82
E IL++++ R +V L ET+ L + I NG +Y D+ P E R +
Sbjct: 235 EKKILAKVHSRFIVS-LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 83 ITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQV 142
T ++ L +LH I + D+K N+LL D +ISD +T T
Sbjct: 294 YTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGY 349
Query: 143 KVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
T G++ P+ ++ D ++ V L E+
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEM 382
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 6/153 (3%)
Query: 24 EVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR-LR 82
E IL++++ R +V L ET+ L + I NG +Y D+ P E R +
Sbjct: 235 EKKILAKVHSRFIVS-LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 83 ITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQV 142
T ++ L +LH I + D+K N+LL D +ISD +T T
Sbjct: 294 YTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGY 349
Query: 143 KVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
T G++ P+ ++ D ++ V L E+
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEM 382
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 6/153 (3%)
Query: 24 EVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR-LR 82
E IL++++ R +V L ET+ L + I NG +Y D+ P E R +
Sbjct: 235 EKKILAKVHSRFIVS-LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 83 ITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQV 142
T ++ L +LH I + D+K N+LL D +ISD +T T
Sbjct: 294 YTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGY 349
Query: 143 KVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
T G++ P+ ++ D ++ V L E+
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEM 382
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 18/172 (10%)
Query: 24 EVVILSQINHRNVVKILGCCLET-----EVPL-LVYEFIPNGSLYQYI--HEQTDDQLPI 75
E+ I+ +++H N+V++ + EV L LV +++P ++Y+ + + LP+
Sbjct: 67 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 125
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL-VDKYQAKISDFRTFKSRAID 134
+ ++L + ++ R L+Y+HS I H DIK N+LL D K+ DF + K +
Sbjct: 126 IY-VKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ--LV 178
Query: 135 RTHLTTQVKVTFGYVDPKY-FRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
R + Y P+ F ++ +T DV+S VL EL +PI D
Sbjct: 179 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 230
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 19/178 (10%)
Query: 19 EQFIN-EVVILSQINHRNVVKIL-----GCCLETEVPL-LVYEFIPNGSLYQYI--HEQT 69
++F N E+ I+ +++H N+V++ + EV L LV +++P ++Y+ + +
Sbjct: 91 KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA 149
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL-VDKYQAKISDFRTF 128
LP+ + ++L + ++ R L+Y+HS I H DIK N+LL D K+ DF +
Sbjct: 150 KQTLPVIY-VKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSA 204
Query: 129 KSRAIDRTHLTTQVKVTFGYVDPKY-FRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
K + R + Y P+ F ++ +T DV+S VL EL +PI D
Sbjct: 205 KQ--LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
HES+ E E+ +S + H +V + + +++YEF+ G L++ + D+
Sbjct: 88 HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV---ADEHN 144
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY--QAKISDF 125
++ + + +V + L ++H + HLD+K NI+ K + K+ DF
Sbjct: 145 KMSEDEAVEYMRQVCKGLCHMHENNYV---HLDLKPENIMFTTKRSNELKLIDF 195
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 18/172 (10%)
Query: 24 EVVILSQINHRNVVKILGCCLET-----EVPL-LVYEFIPNGSLYQYI--HEQTDDQLPI 75
E+ I+ +++H N+V++ + EV L LV +++P ++Y+ + + LP+
Sbjct: 75 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 133
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL-VDKYQAKISDFRTFKSRAID 134
+ ++L + ++ R L+Y+HS I H DIK N+LL D K+ DF + K +
Sbjct: 134 IY-VKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ--LV 186
Query: 135 RTHLTTQVKVTFGYVDPKY-FRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
R + Y P+ F ++ +T DV+S VL EL +PI D
Sbjct: 187 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 238
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 13/103 (12%)
Query: 89 RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSRAIDRTHLTTQVKVT 145
R + LH I H D+K +N+L+ K+ DF R A D + T Q
Sbjct: 123 RAVKVLHGSNVI---HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 146 FGYVDPKYFR-------SSQFTEKSDVYSFSVVLVELNWTKPI 181
YV +++R S++++ DV+S +L EL +PI
Sbjct: 180 TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 19/194 (9%)
Query: 11 KSVHESNVEQF----INEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH 66
K + E+ E F + E+ IL + H NVV ++ C P Y GS+Y
Sbjct: 50 KVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASP---YNRC-KGSIYLVFD 105
Query: 67 EQTDDQLPITWEMRLRITV-EVSRV----LSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
D + + ++ T+ E+ RV L+ L+ + I H D+K+AN+L+ K
Sbjct: 106 FCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLK 165
Query: 122 ISDF---RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNW 177
++DF R F + + VT Y P+ + + D++ ++ E+ W
Sbjct: 166 LADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM-W 224
Query: 178 TK-PIHLVDVEENR 190
T+ PI + E+++
Sbjct: 225 TRSPIMQGNTEQHQ 238
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 18/172 (10%)
Query: 24 EVVILSQINHRNVVKILGCCLET-----EVPL-LVYEFIPNGSLYQYI--HEQTDDQLPI 75
E+ I+ +++H N+V++ + EV L LV +++P ++Y+ + + LP+
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 121
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL-VDKYQAKISDFRTFKSRAID 134
+ ++L + ++ R L+Y+HS I H DIK N+LL D K+ DF + ++ +
Sbjct: 122 IY-VKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS--AKQLV 174
Query: 135 RTHLTTQVKVTFGYVDPKY-FRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
R + Y P+ F ++ +T DV+S VL EL +PI D
Sbjct: 175 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 18/172 (10%)
Query: 24 EVVILSQINHRNVVKILGCCLET-----EVPL-LVYEFIPNGSLYQYI--HEQTDDQLPI 75
E+ I+ +++H N+V++ + EV L LV +++P ++Y+ + + LP+
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 121
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL-VDKYQAKISDFRTFKSRAID 134
+ ++L + ++ R L+Y+HS I H DIK N+LL D K+ DF + K +
Sbjct: 122 IY-VKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ--LV 174
Query: 135 RTHLTTQVKVTFGYVDPKY-FRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
R + Y P+ F ++ +T DV+S VL EL +PI D
Sbjct: 175 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 18/172 (10%)
Query: 24 EVVILSQINHRNVVKILGCCLET-----EVPL-LVYEFIPNGSLYQYI--HEQTDDQLPI 75
E+ I+ +++H N+V++ + EV L LV +++P ++Y+ + + LP+
Sbjct: 71 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 129
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL-VDKYQAKISDFRTFKSRAID 134
+ ++L + ++ R L+Y+HS I H DIK N+LL D K+ DF + K +
Sbjct: 130 IY-VKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ--LV 182
Query: 135 RTHLTTQVKVTFGYVDPKY-FRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
R + Y P+ F ++ +T DV+S VL EL +PI D
Sbjct: 183 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 234
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 18/172 (10%)
Query: 24 EVVILSQINHRNVVKILGCCLET-----EVPL-LVYEFIPNGSLYQYI--HEQTDDQLPI 75
E+ I+ +++H N+V++ + EV L LV +++P ++Y+ + + LP+
Sbjct: 64 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 122
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL-VDKYQAKISDFRTFKSRAID 134
+ ++L + ++ R L+Y+HS I H DIK N+LL D K+ DF + ++ +
Sbjct: 123 IY-VKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS--AKQLV 175
Query: 135 RTHLTTQVKVTFGYVDPKY-FRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
R + Y P+ F ++ +T DV+S VL EL +PI D
Sbjct: 176 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 227
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 18/172 (10%)
Query: 24 EVVILSQINHRNVVKILGCCLET-----EVPL-LVYEFIPNGSLYQYI--HEQTDDQLPI 75
E+ I+ +++H N+V++ + EV L LV +++P ++Y+ + + LP+
Sbjct: 82 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 140
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL-VDKYQAKISDFRTFKSRAID 134
+ ++L + ++ R L+Y+HS I H DIK N+LL D K+ DF + K +
Sbjct: 141 IY-VKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ--LV 193
Query: 135 RTHLTTQVKVTFGYVDPKY-FRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
R + Y P+ F ++ +T DV+S VL EL +PI D
Sbjct: 194 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 245
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L ++ +P+
Sbjct: 52 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPL--- 106
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ +
Sbjct: 107 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 164
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 165 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 199
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L ++ +P+
Sbjct: 53 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPL--- 107
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ +
Sbjct: 108 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 166 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 20/165 (12%)
Query: 14 HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL 73
HES+ E E+ +S + H +V + + +++YEF+ G L++ + D+
Sbjct: 194 HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV---ADEHN 250
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY--QAKISDFRTFKSR 131
++ + + +V + L ++H + HLD+K NI+ K + K+ DF
Sbjct: 251 KMSEDEAVEYMRQVCKGLCHMHENNYV---HLDLKPENIMFTTKRSNELKLIDFGL---- 303
Query: 132 AIDRTHLTTQ--VKVTFG---YVDPKYFRSSQFTEKSDVYSFSVV 171
HL + VKVT G + P+ +D++S V+
Sbjct: 304 ---TAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 345
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 10/156 (6%)
Query: 26 VILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRI-T 84
V+L + H +V + + V ++I G L+ ++ + E R R
Sbjct: 91 VLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRER-----CFLEPRARFYA 145
Query: 85 VEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKV 144
E++ L YLHS+ I + D+K NILL + ++DF K I+ T+
Sbjct: 146 AEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKEN-IEHNSTTSTFCG 201
Query: 145 TFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
T Y+ P+ + D + VL E+ + P
Sbjct: 202 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLP 237
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 63/163 (38%), Gaps = 25/163 (15%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL 81
+NE IL ++N R VV + + LV + G L +I+ P
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP-----EA 286
Query: 82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---------RTFKSRA 132
R + + L + I + D+K NILL D +ISD +T K R
Sbjct: 287 RAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV 346
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
T GY+ P+ ++ ++T D ++ +L E+
Sbjct: 347 -----------GTVGYMAPEVVKNERYTFSPDWWALGCLLYEM 378
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 63/163 (38%), Gaps = 25/163 (15%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL 81
+NE IL ++N R VV + + LV + G L +I+ P
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP-----EA 286
Query: 82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---------RTFKSRA 132
R + + L + I + D+K NILL D +ISD +T K R
Sbjct: 287 RAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV 346
Query: 133 IDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
T GY+ P+ ++ ++T D ++ +L E+
Sbjct: 347 -----------GTVGYMAPEVVKNERYTFSPDWWALGCLLYEM 378
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+EF+ + L ++ +P+
Sbjct: 53 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPL--- 107
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ +
Sbjct: 108 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 166 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 14/175 (8%)
Query: 7 LKKSKSVHESNVEQFIN-----EVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSL 61
+KK K H S + IN E+ +L +++H N++ +L LV++F+ L
Sbjct: 40 IKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DL 98
Query: 62 YQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
I + + P + + +T++ L YLH I H D+K N+LL + K
Sbjct: 99 EVIIKDNSLVLTPSHIKAYMLMTLQG---LEYLHQHW---ILHRDLKPNNLLLDENGVLK 152
Query: 122 ISDFRTFKSRAIDRTHLTTQVKVTFGYVDPK-YFRSSQFTEKSDVYSFSVVLVEL 175
++DF KS QV VT Y P+ F + + D+++ +L EL
Sbjct: 153 LADFGLAKSFGSPNRAYXHQV-VTRWYRAPELLFGARMYGVGVDMWAVGCILAEL 206
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 19/194 (9%)
Query: 11 KSVHESNVEQF----INEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH 66
K + E+ E F + E+ IL + H NVV ++ C P Y GS+Y
Sbjct: 49 KVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASP---YNRC-KGSIYLVFD 104
Query: 67 EQTDDQLPITWEMRLRITV-EVSRV----LSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
D + + ++ T+ E+ RV L+ L+ + I H D+K+AN+L+ K
Sbjct: 105 FCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLK 164
Query: 122 ISDF---RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNW 177
++DF R F + + VT Y P+ + + D++ ++ E+ W
Sbjct: 165 LADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM-W 223
Query: 178 TK-PIHLVDVEENR 190
T+ PI + E+++
Sbjct: 224 TRSPIMQGNTEQHQ 237
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY------IHEQ 68
+S + F NE+ I++ I + + G + ++YE++ N S+ ++ + +
Sbjct: 84 KSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN 143
Query: 69 TDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTF 128
+PI ++ I V SY+H+ +I H D+K +NIL+ + K+SDF
Sbjct: 144 YTCFIPI--QVIKCIIKSVLNSFSYIHNEKNIC--HRDVKPSNILMDKNGRVKLSDFGE- 198
Query: 129 KSRAIDRTHLTTQVKVTFGYVDPKYF--RSSQFTEKSDVYSFSVVL 172
+D+ + T+ ++ P++F SS K D++S + L
Sbjct: 199 SEYMVDKK--IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 75/185 (40%), Gaps = 16/185 (8%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW 77
+EQ E+ +L ++H N++KI + +V E G L + I ++
Sbjct: 64 MEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSE 123
Query: 78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD---KYQAKISDF---RTFKSR 131
+ ++ L+Y HS + H D+K NIL D KI DF FKS
Sbjct: 124 GYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS- 179
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVL-VELNWTKPIHLVDVEENR 190
+T T Y+ P+ F+ T K D++S VV+ L P +EE +
Sbjct: 180 ----DEHSTNAAGTALYMAPEVFKRD-VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQ 234
Query: 191 SLAAY 195
A Y
Sbjct: 235 QKATY 239
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
++ K + +++ E + EV +L Q++H N++K+ + LV E G L+ I
Sbjct: 82 VISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI 141
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
+ + RI +V ++Y+H I H D+K N+LL K +K ++
Sbjct: 142 ISRK----RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESK--SKDANI 192
Query: 126 RTFKSRAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVVL 172
R + ++K G Y+ P+ + + EK DV+S V+L
Sbjct: 193 RIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 241
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAID 134
+T E + + +V++ + +L S I H D+ + NILL +K KI DF + D
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 135 RTHL-TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
++ ++ ++ P+ +T +SDV+SF V+L E+
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 295
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 9 KSKSVHESNVEQFINEVVILSQINHR-NVVKILGCCLETEVPLLV-YEFIPNGSLYQYIH 66
K + H S ++E+ IL I H NVV +LG C + PL+V EF G+L Y+
Sbjct: 68 KEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 126
Query: 67 EQTDDQLP 74
+ ++ +P
Sbjct: 127 SKRNEFVP 134
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 19/194 (9%)
Query: 11 KSVHESNVEQF----INEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH 66
K + E+ E F + E+ IL + H NVV ++ C P Y GS+Y
Sbjct: 50 KVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASP---YNRC-KGSIYLVFD 105
Query: 67 EQTDDQLPITWEMRLRITV-EVSRV----LSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
D + + ++ T+ E+ RV L+ L+ + I H D+K+AN+L+ K
Sbjct: 106 FCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLK 165
Query: 122 ISDF---RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNW 177
++DF R F + + VT Y P+ + + D++ ++ E+ W
Sbjct: 166 LADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM-W 224
Query: 178 TK-PIHLVDVEENR 190
T+ PI + E+++
Sbjct: 225 TRSPIMQGNTEQHQ 238
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 14/90 (15%)
Query: 90 VLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYV 149
L++LHS + HLD+K ANI L + + K+ DF L T
Sbjct: 169 ALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLL-------VELGTAGAGEVQEG 218
Query: 150 DPKYFR----SSQFTEKSDVYSFSVVLVEL 175
DP+Y + +DV+S + ++E+
Sbjct: 219 DPRYMAPELLQGSYGTAADVFSLGLTILEV 248
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAID 134
+T E + + +V++ + +L S I H D+ + NILL +K KI DF + D
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 135 RTHL-TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
++ ++ ++ P+ +T +SDV+SF V+L E+
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 288
Score = 35.4 bits (80), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 9 KSKSVHESNVEQFINEVVILSQINHR-NVVKILGCCLETEVPLLV-YEFIPNGSLYQYIH 66
K + H S ++E+ IL I H NVV +LG C + PL+V EF G+L Y+
Sbjct: 61 KEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 119
Query: 67 EQTDDQLP 74
+ ++ +P
Sbjct: 120 SKRNEFVP 127
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 26/176 (14%)
Query: 22 INEVVILSQINHRNVVKILGC----CLETEVPLLVYEFIPNGSLYQYIHEQ--TDDQLPI 75
+ E+ IL H N++ I E + + + + L++ I Q +DD +
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY 116
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSRA 132
+ R + LH I H D+K +N+L+ K+ DF R A
Sbjct: 117 -------FIYQTLRAVKVLHGSNVI---HRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 133 IDRTHLTTQVKVTFGYVDPKYFR-------SSQFTEKSDVYSFSVVLVELNWTKPI 181
D + T Q +V +++R S++++ DV+S +L EL +PI
Sbjct: 167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
++ K + +++ E + EV +L Q++H N++K+ + LV E G L+ I
Sbjct: 81 VISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI 140
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
+ + RI +V ++Y+H I H D+K N+LL K +K ++
Sbjct: 141 ISRK----RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESK--SKDANI 191
Query: 126 RTFKSRAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVVL 172
R + ++K G Y+ P+ + + EK DV+S V+L
Sbjct: 192 RIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 240
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAID 134
+T E + + +V++ + +L S I H D+ + NILL +K KI DF + D
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 135 RTHL-TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
++ ++ ++ P+ +T +SDV+SF V+L E+
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 293
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 9 KSKSVHESNVEQFINEVVILSQINHR-NVVKILGCCLETEVPLLV-YEFIPNGSLYQYIH 66
K + H S ++E+ IL I H NVV +LG C + PL+V EF G+L Y+
Sbjct: 66 KEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 124
Query: 67 EQTDDQLP 74
+ ++ +P
Sbjct: 125 SKRNEFVP 132
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
++ K + +++ E + EV +L Q++H N++K+ + LV E G L+ I
Sbjct: 58 VISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI 117
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
+ + RI +V ++Y+H I H D+K N+LL K +K ++
Sbjct: 118 ISRK----RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESK--SKDANI 168
Query: 126 RTFKSRAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVVL 172
R + ++K G Y+ P+ + + EK DV+S V+L
Sbjct: 169 RIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 217
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 51 LVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLH-----SVASIPIYHL 105
L+ + +GSLY ++ QT + + LR+ V + L++LH + I H
Sbjct: 83 LITHYHEHGSLYDFLQRQTLEP-----HLALRLAVSAACGLAHLHVEIFGTQGKPAIAHR 137
Query: 106 DIKSANILLVDKYQAKISD--FRTFKSRAIDRTHLTTQVKV-TFGYVDPKYF----RSSQ 158
D KS N+L+ Q I+D S+ D + +V T Y+ P+ R+
Sbjct: 138 DFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDC 197
Query: 159 FT--EKSDVYSFSVVLVEL 175
F + +D+++F +VL E+
Sbjct: 198 FESYKWTDIWAFGLVLWEI 216
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAID 134
+T E + + +V++ + +L S I H D+ + NILL +K KI DF + D
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 135 RTHL-TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
++ ++ ++ P+ +T +SDV+SF V+L E+
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 286
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 9 KSKSVHESNVEQFINEVVILSQINHR-NVVKILGCCLETEVPLLV-YEFIPNGSLYQYIH 66
K + H S ++E+ IL I H NVV +LG C + PL+V EF G+L Y+
Sbjct: 59 KEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 117
Query: 67 EQTDDQLP 74
+ ++ +P
Sbjct: 118 SKRNEFVP 125
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++ G ++ ++
Sbjct: 94 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 153
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 154 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 206
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R T + T Y+ P+ S + + D ++ V++ E+ P D
Sbjct: 207 -GFAKRV---KGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 262
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 70/182 (38%), Gaps = 31/182 (17%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E+ + EV L+++ H +V+ LE + P +Y YI Q + +
Sbjct: 48 EKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSP--KVYLYIQMQLCRKENLKDW 105
Query: 79 MRLRITVE-------------VSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
M R T+E ++ + +LHS + H D+K +NI K+ DF
Sbjct: 106 MNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDF 162
Query: 126 RTFKSRAIDR------------THLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLV 173
+ D T QV Y+ P+ + ++ K D++S ++L
Sbjct: 163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKL-YMSPEQIHGNSYSHKVDIFSLGLILF 221
Query: 174 EL 175
EL
Sbjct: 222 EL 223
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+E + + L ++ +P+
Sbjct: 49 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPL--- 103
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ + T
Sbjct: 104 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 161
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 162 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 72/180 (40%), Gaps = 11/180 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
+L K K V +E +NE IL +N +VK+ + +V E++ G ++ ++
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
P R ++ YLHS+ I + D+K N+L+ + +++DF
Sbjct: 133 RRIGRFSEP---HARF-YAAQIVLTFEYLHSLDLI---YRDLKPENLLIDQQGYIQVTDF 185
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
F R RT P+ S + + D ++ V++ E+ P D
Sbjct: 186 -GFAKRVKGRTWXLCGTPEALA---PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 15/172 (8%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL 81
I EV +L ++ HRN++++ L++E+ N L +Y+ + D + +
Sbjct: 81 IREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLY 139
Query: 82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILL--VDKYQA---KISDFRTFKSRAIDRT 136
++ V ++ HS + H D+K N+LL D + KI DF ++ I
Sbjct: 140 QLINGV----NFCHSRRCL---HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR 192
Query: 137 HLTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKPIHLVDVE 187
T ++ +T Y P+ S+ ++ D++S + + E+ P+ D E
Sbjct: 193 QFTHEI-ITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE 243
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E+ EV IL Q+ H NV+ + +L+ E + G L+ ++ ++ ++ E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEE 115
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDK 117
++ ++YLH+ I H D+K NI+L+DK
Sbjct: 116 EATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDK 151
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 15/171 (8%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLY-QY 64
++ K + +++ E + EV +L Q++H N++K+ + LV E G L+ +
Sbjct: 64 VISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI 123
Query: 65 IHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
I + ++ RI +V ++Y+H I H D+K N+LL K +K ++
Sbjct: 124 ISRKRFSEVDAA-----RIIRQVLSGITYMHKNK---IVHRDLKPENLLLESK--SKDAN 173
Query: 125 FRTFKSRAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVVL 172
R + ++K G Y+ P+ + + EK DV+S V+L
Sbjct: 174 IRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 223
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E+ EV IL Q+ H NV+ + +L+ E + G L+ ++ ++ ++ E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEE 115
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDK 117
++ ++YLH+ I H D+K NI+L+DK
Sbjct: 116 EATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDK 151
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E+ EV IL Q+ H NV+ + +L+ E + G L+ ++ ++ ++ E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEE 115
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDK 117
++ ++YLH+ I H D+K NI+L+DK
Sbjct: 116 EATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDK 151
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 18/172 (10%)
Query: 24 EVVILSQINHRNVVKIL------GCCLETEVPLLVYEFIPNGSLYQYI--HEQTDDQLPI 75
E+ I+ +++H N+V++ G + LV +++P ++Y+ + + LP+
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 121
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL-VDKYQAKISDFRTFKSRAID 134
+ ++L + ++ R L+Y+HS I H DIK N+LL D K+ DF + K +
Sbjct: 122 IY-VKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ--LV 174
Query: 135 RTHLTTQVKVTFGYVDPKY-FRSSQFTEKSDVYSFSVVLVELNWTKPIHLVD 185
R + Y P+ F ++ +T DV+S VL EL +PI D
Sbjct: 175 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E+ EV IL Q+ H NV+ + +L+ E + G L+ ++ ++ ++ E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEE 115
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDK 117
++ ++YLH+ I H D+K NI+L+DK
Sbjct: 116 EATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDK 151
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E+ EV IL Q+ H NV+ + +L+ E + G L+ ++ ++ ++ E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEE 115
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDK 117
++ ++YLH+ I H D+K NI+L+DK
Sbjct: 116 EATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDK 151
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 26/121 (21%)
Query: 83 ITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQV 142
+ ++ +V+ YLHS + H D+K +NILL + K++DF +S ++ +T +
Sbjct: 114 VVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRS-FVNIRRVTNNI 169
Query: 143 KVTFG---------------YVDPKYFR-------SSQFTEKSDVYSFSVVLVELNWTKP 180
++ YV +++R S+++T+ D++S +L E+ KP
Sbjct: 170 PLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKP 229
Query: 181 I 181
I
Sbjct: 230 I 230
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 87 VSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA----KISDFRTFKSRAIDRTHLTTQV 142
+ + + YLHS + H D+K +NIL VD+ +I DF K + L T
Sbjct: 130 IGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 143 KVTFGYVDPKYFRSSQFTEKSDVYSFSVVL 172
T +V P+ + + E D++S ++L
Sbjct: 187 -YTANFVAPEVLKRQGYDEGCDIWSLGILL 215
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 9/171 (5%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQY 64
+LKK + + +VE + E +L+ + L C +T L V E++ G L +
Sbjct: 52 ILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYH 111
Query: 65 IHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
I + + P + E++ L +L S I + D+K N++L + KI+D
Sbjct: 112 IQQVGRFKEPHA----VFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIAD 164
Query: 125 FRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F K D T T Y+ P+ + + D ++F V+L E+
Sbjct: 165 FGMCKENIWDGV-TTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM 214
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 31/171 (18%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPL-----LVYEFIPNGSLYQYIHEQTDDQL 73
++ + E+ +L+ +H N++ + + E P LV E + L Q IH+Q ++
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQ---RI 129
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI 133
I+ + I + +L LH + + H D+ NILL D I DF +
Sbjct: 130 VISPQ---HIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTA 186
Query: 134 D--RTHLTTQVKVTFGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
D +TH YV +++R+ + FT+ D++S V+ E+
Sbjct: 187 DANKTH----------YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEM 227
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 111/260 (42%), Gaps = 31/260 (11%)
Query: 5 WLLKKSKSVHESNVEQFINEVVILSQI-NHRNVVKILGCCL-------ETEVPLLVYEFI 56
+ LK+ S E I EV + ++ H N+V+ + L+ +
Sbjct: 56 YALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTEL 115
Query: 57 PNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD 116
G L +++ ++ + + P++ + L+I + R + ++H PI H D+K N+LL +
Sbjct: 116 CKGQLVEFL-KKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKP-PIIHRDLKVENLLLSN 173
Query: 117 KYQAKISDFR-------------TFKSRAI---DRTHLTTQVKVTFGYVDPKYFRSSQFT 160
+ K+ DF + + RA+ + T TT + T +D + +
Sbjct: 174 QGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIID--LYSNFPIG 231
Query: 161 EKSDVYSFSVVLVELNWTK-PIHLVDVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLN 219
EK D+++ +L L + + P D + R + +S + F + + L +N
Sbjct: 232 EKQDIWALGCILYLLCFRQHPFE--DGAKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVN 289
Query: 220 GKKQPTMKEVTLELAGIRAS 239
+++ ++ EV +L I A+
Sbjct: 290 PEERLSIAEVVHQLQEIAAA 309
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQYIHEQTDDQLPITWEMR 80
I E+ +L ++NH N+VK+L + TE L LV+E + + L +++ +P+
Sbjct: 53 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPL--- 107
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
I + ++L L S + H D+K N+L+ + K++DF ++ +
Sbjct: 108 --IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 141 QVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
+V VT Y P+ ++ + D++S + E+
Sbjct: 166 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 87 VSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA----KISDFRTFKSRAIDRTHLTTQV 142
+ + + YLHS + H D+K +NIL VD+ +I DF K + L T
Sbjct: 130 IGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 143 KVTFGYVDPKYFRSSQFTEKSDVYSFSVVL 172
T +V P+ + + E D++S ++L
Sbjct: 187 -YTANFVAPEVLKRQGYDEGCDIWSLGILL 215
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 31/171 (18%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPL-----LVYEFIPNGSLYQYIHEQTDDQL 73
++ + E+ +L+ +H N++ + + E P LV E + L Q IH+Q ++
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQ---RI 129
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI 133
I+ + I + +L LH + + H D+ NILL D I DF +
Sbjct: 130 VISPQ---HIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTA 186
Query: 134 D--RTHLTTQVKVTFGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
D +TH YV +++R+ + FT+ D++S V+ E+
Sbjct: 187 DANKTH----------YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEM 227
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/166 (19%), Positives = 69/166 (41%), Gaps = 11/166 (6%)
Query: 10 SKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQT 69
+K + + ++ E I + H N+V++ E LV++ + G L++
Sbjct: 39 TKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFE------ 92
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA---KISDFR 126
D + + + + ++L + + + H D+K N+LL K + K++DF
Sbjct: 93 -DIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFG 151
Query: 127 TFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVL 172
D+ T GY+ P+ R + + D+++ V+L
Sbjct: 152 LAIEVQGDQQAWFG-FAGTPGYLSPEVLRKEAYGKPVDIWACGVIL 196
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 9/171 (5%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQY 64
+LKK + + +VE + E +L+ + L C +T L V E++ G L +
Sbjct: 373 ILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYH 432
Query: 65 IHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISD 124
I + + P + E++ L +L S I + D+K N++L + KI+D
Sbjct: 433 IQQVGRFKEPHA----VFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIAD 485
Query: 125 FRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
F K D T T Y+ P+ + + D ++F V+L E+
Sbjct: 486 FGMCKENIWDGV-TTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM 535
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 27/143 (18%)
Query: 51 LVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLH-----SVASIPIYHL 105
L+ + GSLY Y+ T D + LRI + ++ L++LH + I H
Sbjct: 83 LITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIEIFGTQGKPAIAHR 137
Query: 106 DIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKV-------TFGYVDPKYFRSS- 157
D+KS NIL+ Q I+D A+ + T Q+ V T Y+ P+ +
Sbjct: 138 DLKSKNILVKKNGQCCIADL----GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI 193
Query: 158 -----QFTEKSDVYSFSVVLVEL 175
++ D+++F +VL E+
Sbjct: 194 QVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 27/143 (18%)
Query: 51 LVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLH-----SVASIPIYHL 105
L+ + GSLY Y+ T D + LRI + ++ L++LH + I H
Sbjct: 83 LITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIEIFGTQGKPAIAHR 137
Query: 106 DIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKV-------TFGYVDPKYFRSS- 157
D+KS NIL+ Q I+D A+ + T Q+ V T Y+ P+ +
Sbjct: 138 DLKSKNILVKKNGQCCIADL----GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI 193
Query: 158 -----QFTEKSDVYSFSVVLVEL 175
++ D+++F +VL E+
Sbjct: 194 QVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 14/106 (13%)
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
L I ++++ + +LHS + H D+K +NI K+ DF + D T
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 141 QVKV-----------TFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
+ T Y+ P+ + ++ K D++S ++L EL
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 18/162 (11%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLL--VYEFIPNGSLYQY--IHEQTDDQL 73
+EQ E+ IL +++H NVVK++ + L V+E + G + + + ++DQ
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI 133
++ ++ + + YLH I H DIK +N+L+ + KI+DF
Sbjct: 140 RFYFQ-------DLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG 189
Query: 134 DRTHLTTQVKVTFGYVDPKYFRSSQ--FTEKS-DVYSFSVVL 172
L+ V T ++ P+ ++ F+ K+ DV++ V L
Sbjct: 190 SDALLSNTVG-TPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 27/143 (18%)
Query: 51 LVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLH-----SVASIPIYHL 105
L+ + GSLY Y+ T D + LRI + ++ L++LH + I H
Sbjct: 112 LITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIEIFGTQGKPAIAHR 166
Query: 106 DIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKV-------TFGYVDPKYFRSS- 157
D+KS NIL+ Q I+D A+ + T Q+ V T Y+ P+ +
Sbjct: 167 DLKSKNILVKKNGQCCIADL----GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI 222
Query: 158 -----QFTEKSDVYSFSVVLVEL 175
++ D+++F +VL E+
Sbjct: 223 QVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 12/117 (10%)
Query: 4 LWLLKKSK-----SVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPN 58
++ +K+SK SV E N + + +L Q H +VV+ E + L+ E+
Sbjct: 34 IYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNG 91
Query: 59 GSLYQYIHEQTDDQLPITWEMRLR-ITVEVSRVLSYLHSVASIPIYHLDIKSANILL 114
GSL I E + E L+ + ++V R L Y+HS++ + H+DIK +NI +
Sbjct: 92 GSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 144
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 12/117 (10%)
Query: 4 LWLLKKSK-----SVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPN 58
++ +K+SK SV E N + + +L Q H +VV+ E + L+ E+
Sbjct: 38 IYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNG 95
Query: 59 GSLYQYIHEQTDDQLPITWEMRLR-ITVEVSRVLSYLHSVASIPIYHLDIKSANILL 114
GSL I E + E L+ + ++V R L Y+HS++ + H+DIK +NI +
Sbjct: 96 GSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 148
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 12/117 (10%)
Query: 4 LWLLKKSK-----SVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPN 58
++ +K+SK SV E N + + +L Q H +VV+ E + L+ E+
Sbjct: 36 IYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNG 93
Query: 59 GSLYQYIHEQTDDQLPITWEMRLR-ITVEVSRVLSYLHSVASIPIYHLDIKSANILL 114
GSL I E + E L+ + ++V R L Y+HS++ + H+DIK +NI +
Sbjct: 94 GSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 65/164 (39%), Gaps = 13/164 (7%)
Query: 7 LKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH 66
+ K K V + V E+ I+ + H +V + + E +V + + G L ++
Sbjct: 48 MNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ 107
Query: 67 EQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR 126
+ E E+ L YL + I H D+K NILL + I+DF
Sbjct: 108 QNVH----FKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFN 160
Query: 127 TFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSV 170
+ + R T + T Y+ P+ F S K YSF+V
Sbjct: 161 I--AAMLPRETQITTMAGTKPYMAPEMFSS----RKGAGYSFAV 198
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 12/117 (10%)
Query: 4 LWLLKKSK-----SVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPN 58
++ +K+SK SV E N + + +L Q H +VV+ E + L+ E+
Sbjct: 36 IYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNG 93
Query: 59 GSLYQYIHEQTDDQLPITWEMRLR-ITVEVSRVLSYLHSVASIPIYHLDIKSANILL 114
GSL I E + E L+ + ++V R L Y+HS++ + H+DIK +NI +
Sbjct: 94 GSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E+ EV IL Q+ H N++ + +L+ E + G L+ ++ ++ ++ E
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEE 115
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDK 117
++ ++YLH+ I H D+K NI+L+DK
Sbjct: 116 EATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDK 151
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 84/194 (43%), Gaps = 19/194 (9%)
Query: 11 KSVHESNVEQF----INEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIH 66
K + E+ E F + E+ IL + H NVV ++ C P Y S+Y
Sbjct: 50 KVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASP---YNRC-KASIYLVFD 105
Query: 67 EQTDDQLPITWEMRLRITV-EVSRV----LSYLHSVASIPIYHLDIKSANILLVDKYQAK 121
D + + ++ T+ E+ RV L+ L+ + I H D+K+AN+L+ K
Sbjct: 106 FCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLK 165
Query: 122 ISDF---RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNW 177
++DF R F + + VT Y P+ + + D++ ++ E+ W
Sbjct: 166 LADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM-W 224
Query: 178 TK-PIHLVDVEENR 190
T+ PI + E+++
Sbjct: 225 TRSPIMQGNTEQHQ 238
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/166 (19%), Positives = 68/166 (40%), Gaps = 11/166 (6%)
Query: 10 SKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQT 69
+K + + ++ E I + H N+V++ E LV++ + G L++
Sbjct: 66 TKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFE------ 119
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA---KISDFR 126
D + + + + ++L ++ + I H D+K N+LL K + K++DF
Sbjct: 120 -DIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADF- 177
Query: 127 TFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVL 172
T GY+ P+ R + + D+++ V+L
Sbjct: 178 GLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVIL 223
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 89 RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFKSRAIDRTHLTTQVKVT 145
R + LH I H D+K +N+L+ K+ DF R A D + T Q
Sbjct: 123 RAVKVLHGSNVI---HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 146 FGYVDPKYFR-------SSQFTEKSDVYSFSVVLVELNWTKPI 181
V +++R S++++ DV+S +L EL +PI
Sbjct: 180 TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 62/154 (40%), Gaps = 8/154 (5%)
Query: 27 ILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVE 86
IL ++ H +V ++ L+ E++ G L+ Q + + + E
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFM----QLEREGIFMEDTACFYLAE 129
Query: 87 VSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTF 146
+S L +LH I + D+K NI+L + K++DF K D T +T T
Sbjct: 130 ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTI 185
Query: 147 GYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
Y+ P+ S D +S ++ ++ P
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAP 219
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 37/192 (19%)
Query: 7 LKKSKSVHESNVEQFINEVVILSQINHRNVVKIL------GCCLETEVPLLVYEFIPNGS 60
+KK +V+ + E+ I+ +++H N+VK+ G L +V GS
Sbjct: 41 IKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV----------GS 90
Query: 61 LYQ----YI---HEQTD-----DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIK 108
L + YI + +TD +Q P+ E ++ R L Y+HS + H D+K
Sbjct: 91 LTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLK 147
Query: 109 SANILL-VDKYQAKISDF---RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRS-SQFTEKS 163
AN+ + + KI DF R + HL+ + VT Y P+ S + +T+
Sbjct: 148 PANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGL-VTKWYRSPRLLLSPNNYTKAI 206
Query: 164 DVYSFSVVLVEL 175
D+++ + E+
Sbjct: 207 DMWAAGCIFAEM 218
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 40/191 (20%)
Query: 17 NVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDD----- 71
+ ++ + E+ IL+++NH +VVK+ L+ +P V +F LY + D
Sbjct: 95 DCKRILREIAILNRLNHDHVVKV----LDIVIPKDVEKF---DELYVVLEIADSDFKKLF 147
Query: 72 QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTF 128
+ P+ + L I + +L + V S I H D+K AN L+ K+ DF RT
Sbjct: 148 RTPV-YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206
Query: 129 KSRAIDRTHLTTQVK------VTF-----------GYVDPKYFRSSQ-------FTEKSD 164
+ L + VTF G+V +++R+ + +TE D
Sbjct: 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAID 266
Query: 165 VYSFSVVLVEL 175
V+S + EL
Sbjct: 267 VWSIGCIFAEL 277
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 62/154 (40%), Gaps = 8/154 (5%)
Query: 27 ILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVE 86
IL ++ H +V ++ L+ E++ G L+ Q + + + E
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFM----QLEREGIFMEDTACFYLAE 129
Query: 87 VSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTF 146
+S L +LH I + D+K NI+L + K++DF K D T +T T
Sbjct: 130 ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTI 185
Query: 147 GYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
Y+ P+ S D +S ++ ++ P
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAP 219
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 11/172 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQY 64
+LKK V + V + E +L H + L +T L V E+ G L+ +
Sbjct: 183 ILKKEVIVAKDEVAHTLTENRVLQNSRH-PFLTALKYSFQTHDRLCFVMEYANGGELFFH 241
Query: 65 IHEQTDDQLPITWEMRLRI-TVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
+ + + E R R E+ L YLHS ++ +Y D+K N++L KI+
Sbjct: 242 LSRER-----VFSEDRARFYGAEIVSALDYLHSEKNV-VYR-DLKLENLMLDKDGHIKIT 294
Query: 124 DFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
DF K D + T T Y+ P+ + + D + VV+ E+
Sbjct: 295 DFGLCKEGIKDGATMKTFCG-TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 345
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 13/170 (7%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
++ K + +++ E + EV +L Q++H N+ K+ + LV E G L+ I
Sbjct: 58 VISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI 117
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
+ + RI +V ++Y H I H D+K N+LL K +K ++
Sbjct: 118 ISRK----RFSEVDAARIIRQVLSGITYXHKN---KIVHRDLKPENLLLESK--SKDANI 168
Query: 126 RTFKSRAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVVL 172
R + + K G Y+ P+ + + EK DV+S V+L
Sbjct: 169 RIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 217
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 12/172 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQY 64
+L+K + + V + E +L H + L +T L V E+ G L+ +
Sbjct: 37 ILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALKYAFQTHDRLCFVMEYANGGELFFH 95
Query: 65 IHEQTDDQLPITWEMRLRI-TVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
+ + + E R R E+ L YLHS + + DIK N++L KI+
Sbjct: 96 LSRER-----VFTEERARFYGAEIVSALEYLHSRDVV---YRDIKLENLMLDKDGHIKIT 147
Query: 124 DFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
DF K D + T T Y+ P+ + + D + VV+ E+
Sbjct: 148 DFGLCKEGISDGATMKTFCG-TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 198
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 35.4 bits (80), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 11/172 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQY 64
+LKK V + V + E +L H + L +T L V E+ G L+ +
Sbjct: 180 ILKKEVIVAKDEVAHTLTENRVLQNSRH-PFLTALKYSFQTHDRLCFVMEYANGGELFFH 238
Query: 65 IHEQTDDQLPITWEMRLRI-TVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
+ + + E R R E+ L YLHS ++ +Y D+K N++L KI+
Sbjct: 239 LSRER-----VFSEDRARFYGAEIVSALDYLHSEKNV-VYR-DLKLENLMLDKDGHIKIT 291
Query: 124 DFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
DF K D + T T Y+ P+ + + D + VV+ E+
Sbjct: 292 DFGLCKEGIKDGATMKTFCG-TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 342
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 69/166 (41%), Gaps = 11/166 (6%)
Query: 10 SKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQT 69
+K + + ++ E I + H N+V++ E LV++ + G L++
Sbjct: 39 TKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFE------ 92
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA---KISDFR 126
D + + + + ++L ++ I H D+K N+LL K + K++DF
Sbjct: 93 -DIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFG 151
Query: 127 TFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVL 172
D+ T GY+ P+ R + + D+++ V+L
Sbjct: 152 LAIEVQGDQQAWFG-FAGTPGYLSPEVLRKDPYGKPVDMWACGVIL 196
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 35.0 bits (79), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 69/166 (41%), Gaps = 11/166 (6%)
Query: 10 SKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQT 69
+K + + ++ E I + H N+V++ E LV++ + G L++
Sbjct: 39 TKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFE------ 92
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA---KISDFR 126
D + + + + ++L ++ I H D+K N+LL K + K++DF
Sbjct: 93 -DIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFG 151
Query: 127 TFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVL 172
D+ T GY+ P+ R + + D+++ V+L
Sbjct: 152 LAIEVQGDQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVIL 196
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 35.0 bits (79), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 12/172 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQY 64
+L+K + + V + E +L H + L +T L V E+ G L+ +
Sbjct: 40 ILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALKYAFQTHDRLCFVMEYANGGELFFH 98
Query: 65 IHEQTDDQLPITWEMRLRI-TVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
+ + + E R R E+ L YLHS + + DIK N++L KI+
Sbjct: 99 LSRER-----VFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKIT 150
Query: 124 DFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
DF K D + T T Y+ P+ + + D + VV+ E+
Sbjct: 151 DFGLCKEGISDGATMKTFCG-TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 201
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 35.0 bits (79), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 12/172 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQY 64
+L+K + + V + E +L H + L +T L V E+ G L+ +
Sbjct: 37 ILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALKYAFQTHDRLCFVMEYANGGELFFH 95
Query: 65 IHEQTDDQLPITWEMRLRI-TVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
+ + + E R R E+ L YLHS + + DIK N++L KI+
Sbjct: 96 LSRER-----VFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKIT 147
Query: 124 DFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
DF K D + T T Y+ P+ + + D + VV+ E+
Sbjct: 148 DFGLCKEGISDGATMKTFCG-TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 198
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 9/155 (5%)
Query: 22 INEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL 81
+ E+ +L Q+ H N+V +L LV+E+ + L HE Q + +
Sbjct: 50 LREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVL----HELDRYQRGVPEHLVK 105
Query: 82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQ 141
IT + + +++ H I H D+K NIL+ K+ DF + + +
Sbjct: 106 SITWQTLQAVNFCHKHNCI---HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE 162
Query: 142 VKVTFGYVDPKYF-RSSQFTEKSDVYSFSVVLVEL 175
V T Y P+ +Q+ DV++ V EL
Sbjct: 163 V-ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAEL 196
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + A + T
Sbjct: 140 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT--------- 187
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 188 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 34.7 bits (78), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + A + T
Sbjct: 140 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT--------- 187
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 188 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 34.7 bits (78), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + A + T
Sbjct: 140 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT--------- 187
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 188 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 34.7 bits (78), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 15/156 (9%)
Query: 24 EVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNG-SLYQYI--HEQTDDQLPITWEMR 80
E+ ILS++ H N++K+L LV E +G L+ +I H + D+ L +
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQ 138
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTT 140
L V R+ I H DIK NI++ + + K+ DF + + ++R L
Sbjct: 139 LVSAVGYLRLKD---------IIHRDIKDENIVIAEDFTIKLIDFGS--AAYLERGKLFY 187
Query: 141 QVKVTFGYVDPKYFRSSQF-TEKSDVYSFSVVLVEL 175
T Y P+ + + + +++S V L L
Sbjct: 188 TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTL 223
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 34.7 bits (78), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/166 (18%), Positives = 67/166 (40%), Gaps = 11/166 (6%)
Query: 10 SKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQT 69
+K + + ++ E I + H N+V++ E L+++ + G L++
Sbjct: 57 TKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFE------ 110
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA---KISDFR 126
D + + + + ++L + + + H D+K N+LL K + K++DF
Sbjct: 111 -DIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADF- 168
Query: 127 TFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVL 172
T GY+ P+ R + + D+++ V+L
Sbjct: 169 GLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 214
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 34.7 bits (78), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 89 RVLSYLHSVASIPIYHLDIKSANILLV----DKYQAKISDF---RTFKSRAIDRTHLTTQ 141
++L +H + + + H D+K ANIL++ ++ + KI+D R F S L
Sbjct: 136 QILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPV 195
Query: 142 VKVTFGYVDPKYFRSSQ-FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSKEA 200
V VTF Y P+ ++ +T+ D+++ + EL ++PI E+ ++ Y +
Sbjct: 196 V-VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 254
Query: 201 EK 202
++
Sbjct: 255 DR 256
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 33.9 bits (76), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 66/160 (41%), Gaps = 9/160 (5%)
Query: 17 NVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPIT 76
+ E E I + H ++V++L + +V+EF+ L I ++ D +
Sbjct: 69 STEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYS 128
Query: 77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA---KISDFRTFKSRAI 133
+ ++ L Y H I H D+K N+LL K + K+ DF + +
Sbjct: 129 EAVASHYMRQILEALRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGV--AIQL 183
Query: 134 DRTHLTTQVKV-TFGYVDPKYFRSSQFTEKSDVYSFSVVL 172
+ L +V T ++ P+ + + + DV+ V+L
Sbjct: 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVIL 223
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 69/166 (41%), Gaps = 34/166 (20%)
Query: 24 EVVILSQINHRNVVKILGC-----CLETEVPLLVYEFIPNGSLYQYIHEQ--TDDQLPIT 76
E+ +L + H NV+ +L LE + + + L + Q TDD +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF- 129
Query: 77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT 136
+ ++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 130 ------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT 180
Query: 137 HLTTQVKVTFGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 181 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 87 VSRVLSYLHSVASIPIYHLDIKSANILLVDKY----QAKISDFRTFKSRAIDRTHLTTQV 142
+++ + YLH+ + H D+K +NIL VD+ +I DF K + L T
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPC 181
Query: 143 KVTFGYVDPKYFRSSQFTEKSDVYSFSVVL 172
T +V P+ + D++S V+L
Sbjct: 182 -YTANFVAPEVLERQGYDAACDIWSLGVLL 210
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 12/172 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQY 64
+L+K + + V + E +L H + L +T L V E+ G L+ +
Sbjct: 42 ILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALKYAFQTHDRLCFVMEYANGGELFFH 100
Query: 65 IHEQTDDQLPITWEMRLRI-TVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
+ + + E R R E+ L YLHS + + DIK N++L KI+
Sbjct: 101 LSRER-----VFTEERARFYGAEIVSALEYLHSRDVV---YRDIKLENLMLDKDGHIKIT 152
Query: 124 DFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
DF K D + T Y+ P+ + + D + VV+ E+
Sbjct: 153 DFGLCKEGISDGATMKXFCG-TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 203
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 12/172 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQY 64
+L+K + + V + E +L H + L +T L V E+ G L+ +
Sbjct: 37 ILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALKYAFQTHDRLCFVMEYANGGELFFH 95
Query: 65 IHEQTDDQLPITWEMRLRI-TVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
+ + + E R R E+ L YLHS + + DIK N++L KI+
Sbjct: 96 LSRER-----VFTEERARFYGAEIVSALEYLHSRDVV---YRDIKLENLMLDKDGHIKIT 147
Query: 124 DFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
DF K D + T Y+ P+ + + D + VV+ E+
Sbjct: 148 DFGLCKEGISDGATMKXFCG-TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 198
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 69/166 (41%), Gaps = 34/166 (20%)
Query: 24 EVVILSQINHRNVVKILGC-----CLETEVPLLVYEFIPNGSLYQYIHEQ--TDDQLPIT 76
E+ +L + H NV+ +L LE + + + L + Q TDD +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF- 129
Query: 77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT 136
+ ++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 130 ------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMT 180
Query: 137 HLTTQVKVTFGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 181 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 87 VSRVLSYLHSVASIPIYHLDIKSANILLVDKY----QAKISDFRTFKSRAIDRTHLTTQV 142
+++ + YLH+ + H D+K +NIL VD+ +I DF K + L T
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPC 181
Query: 143 KVTFGYVDPKYFRSSQFTEKSDVYSFSVVL 172
T +V P+ + D++S V+L
Sbjct: 182 -YTANFVAPEVLERQGYDAACDIWSLGVLL 210
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 17 NVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI--HEQTDDQLP 74
NVE E+ IL ++NH ++KI + E +V E + G L+ + +++ +
Sbjct: 67 NVE---TEIEILKKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 122
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ---AKISDFRTFKSR 131
+ ++ + V+ YLH I H D+K N+LL + + KI+DF S+
Sbjct: 123 KLYFYQMLLAVQ------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG--HSK 171
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRS---SQFTEKSDVYSFSVVL 172
+ T L + T Y+ P+ S + + D +S V+L
Sbjct: 172 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 215
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 19/139 (13%)
Query: 51 LVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLH----SVASIP-IYHL 105
L+ ++ NGSLY Y+ T D + L++ L +LH S P I H
Sbjct: 112 LITDYHENGSLYDYLKSTTLDAKSM-----LKLAYSSVSGLCHLHTEIFSTQGKPAIAHR 166
Query: 106 DIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFG---YVDPKYFRSS----- 157
D+KS NIL+ I+D D + G Y+ P+ S
Sbjct: 167 DLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNH 226
Query: 158 -QFTEKSDVYSFSVVLVEL 175
Q +D+YSF ++L E+
Sbjct: 227 FQSYIMADMYSFGLILWEV 245
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 17 NVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI--HEQTDDQLP 74
NVE E+ IL ++NH ++KI + E +V E + G L+ + +++ +
Sbjct: 60 NVE---TEIEILKKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 115
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ---AKISDFRTFKSR 131
+ ++ + V+ YLH I H D+K N+LL + + KI+DF S+
Sbjct: 116 KLYFYQMLLAVQ------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG--HSK 164
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRS---SQFTEKSDVYSFSVVL 172
+ T L + T Y+ P+ S + + D +S V+L
Sbjct: 165 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 208
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 17 NVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI--HEQTDDQLP 74
NVE E+ IL ++NH ++KI + E +V E + G L+ + +++ +
Sbjct: 61 NVE---TEIEILKKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 116
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ---AKISDFRTFKSR 131
+ ++ + V+ YLH I H D+K N+LL + + KI+DF S+
Sbjct: 117 KLYFYQMLLAVQ------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG--HSK 165
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRS---SQFTEKSDVYSFSVVL 172
+ T L + T Y+ P+ S + + D +S V+L
Sbjct: 166 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 17 NVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI--HEQTDDQLP 74
NVE E+ IL ++NH ++KI + E +V E + G L+ + +++ +
Sbjct: 61 NVE---TEIEILKKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 116
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ---AKISDFRTFKSR 131
+ ++ + V+ YLH I H D+K N+LL + + KI+DF S+
Sbjct: 117 KLYFYQMLLAVQ------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG--HSK 165
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRS---SQFTEKSDVYSFSVVL 172
+ T L + T Y+ P+ S + + D +S V+L
Sbjct: 166 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 16/168 (9%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
LLKKS +H VE+ E+ L + H +++K+ ++V E+ G L+ YI
Sbjct: 46 LLKKS-DMH-MRVER---EISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYI 99
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
E+ +T + R ++ + Y H I H D+K N+LL D KI+DF
Sbjct: 100 VEKKR----MTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADF 152
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFT-EKSDVYSFSVVL 172
+ D L T + Y P+ + + DV+S +VL
Sbjct: 153 -GLSNIMTDGNFLKTSCG-SPNYAAPEVINGKLYAGPEVDVWSCGIVL 198
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 17 NVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI--HEQTDDQLP 74
NVE E+ IL ++NH ++KI + E +V E + G L+ + +++ +
Sbjct: 61 NVE---TEIEILKKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 116
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ---AKISDFRTFKSR 131
+ ++ + V+ YLH I H D+K N+LL + + KI+DF S+
Sbjct: 117 KLYFYQMLLAVQ------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG--HSK 165
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRS---SQFTEKSDVYSFSVVL 172
+ T L + T Y+ P+ S + + D +S V+L
Sbjct: 166 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 69/166 (41%), Gaps = 34/166 (20%)
Query: 24 EVVILSQINHRNVVKILGC-----CLETEVPLLVYEFIPNGSLYQYIHEQ--TDDQLPIT 76
E+ +L + H NV+ +L LE + + + L + Q TDD +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF- 129
Query: 77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT 136
+ ++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 130 ------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
Query: 137 HLTTQVKVTFGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 181 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 78/185 (42%), Gaps = 34/185 (18%)
Query: 22 INEVVILSQINHR-----NVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQ---TDDQL 73
I+E V INHR N+V+ L ++ E+ G LY+ I ++D+
Sbjct: 59 IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEA 118
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA---KISDFRTFKS 130
++ L +SY HS+ I H D+K N LL D A KI DF KS
Sbjct: 119 RFFFQQLL-------SGVSYCHSMQ---ICHRDLKLENTLL-DGSPAPRLKICDFGYSKS 167
Query: 131 RAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEK-SDVYSFSVVL-VELNWTKPIHLVD 185
L +Q K T G Y+ P+ ++ K +DV+S V L V L P D
Sbjct: 168 SV-----LHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE--D 220
Query: 186 VEENR 190
EE R
Sbjct: 221 PEEPR 225
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 12/172 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQY 64
+L+K + + V + E +L H + L +T L V E+ G L+ +
Sbjct: 37 ILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALKYAFQTHDRLCFVMEYANGGELFFH 95
Query: 65 IHEQTDDQLPITWEMRLRI-TVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
+ + + E R R E+ L YLHS + + DIK N++L KI+
Sbjct: 96 LSRER-----VFTEERARFYGAEIVSALEYLHSRDVV---YRDIKLENLMLDKDGHIKIT 147
Query: 124 DFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
DF K D + T Y+ P+ + + D + VV+ E+
Sbjct: 148 DFGLCKEGISDGATMKXFCG-TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 198
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 17 NVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-IHEQTDDQLPI 75
+V++F E+ I+ ++H N++++ + LV E G L++ +H++ +
Sbjct: 49 DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDA 108
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANIL-LVDKYQA--KISDF---RTFK 129
RI +V ++Y H + + H D+K N L L D + K+ DF FK
Sbjct: 109 A-----RIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160
Query: 130 SRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVL 172
+ RT + T YV P+ + + D +S V++
Sbjct: 161 PGKMMRTKVGTPY-----YVSPQVL-EGLYGPECDEWSAGVMM 197
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 12/172 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPL-LVYEFIPNGSLYQY 64
+L+K + + V + E +L H + L +T L V E+ G L+ +
Sbjct: 37 ILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALKYAFQTHDRLCFVMEYANGGELFFH 95
Query: 65 IHEQTDDQLPITWEMRLRI-TVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
+ + + E R R E+ L YLHS + + DIK N++L KI+
Sbjct: 96 LSRER-----VFTEERARFYGAEIVSALEYLHSRDVV---YRDIKLENLMLDKDGHIKIT 147
Query: 124 DFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL 175
DF K D + T Y+ P+ + + D + VV+ E+
Sbjct: 148 DFGLCKEGISDGATMKXFCG-TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 198
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 89 RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGY 148
R L Y+HS I H D+K +N+ + + + +I DF + + T GY
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT----------GY 188
Query: 149 VDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
V +++R+ + + + D++S ++ EL
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 17 NVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI--HEQTDDQLP 74
NVE E+ IL ++NH ++KI + E +V E + G L+ + +++ +
Sbjct: 186 NVE---TEIEILKKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 241
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ---AKISDFRTFKSR 131
+ ++ + V+ YLH I H D+K N+LL + + KI+DF S+
Sbjct: 242 KLYFYQMLLAVQ------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG--HSK 290
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRS---SQFTEKSDVYSFSVVL 172
+ T L + T Y+ P+ S + + D +S V+L
Sbjct: 291 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 334
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 17 NVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI--HEQTDDQLP 74
NVE E+ IL ++NH ++KI + E +V E + G L+ + +++ +
Sbjct: 200 NVE---TEIEILKKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 255
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ---AKISDFRTFKSR 131
+ ++ + V+ YLH I H D+K N+LL + + KI+DF S+
Sbjct: 256 KLYFYQMLLAVQ------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG--HSK 304
Query: 132 AIDRTHLTTQVKVTFGYVDPKYFRS---SQFTEKSDVYSFSVVL 172
+ T L + T Y+ P+ S + + D +S V+L
Sbjct: 305 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 348
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 17 NVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY-IHEQTDDQLPI 75
+V++F E+ I+ ++H N++++ + LV E G L++ +H++ +
Sbjct: 66 DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDA 125
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANIL-LVDKYQA--KISDF---RTFK 129
RI +V ++Y H + + H D+K N L L D + K+ DF FK
Sbjct: 126 A-----RIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 177
Query: 130 SRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVL 172
+ RT + T YV P+ + + D +S V++
Sbjct: 178 PGKMMRTKVGTPY-----YVSPQVL-EGLYGPECDEWSAGVMM 214
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 14/161 (8%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI--HEQTDDQLPI 75
V + E+ L H +++K+ +V E++ G L+ YI H + ++
Sbjct: 55 VGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM--- 111
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDR 135
E R R+ ++ + Y H + H D+K N+LL AKI+DF + D
Sbjct: 112 --EAR-RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADF-GLSNMMSDG 164
Query: 136 THLTTQVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVLVEL 175
L T + Y P+ + D++S V+L L
Sbjct: 165 EFLRTSCG-SPNYAAPEVISGRLYAGPEVDIWSCGVILYAL 204
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 90 VLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYV 149
+L L ++ I H D+K NILL + ++ I F S + + T ++ F Y
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVI-DFGSSCYEHQRVYTXIQSRF-YR 266
Query: 150 DPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAA 194
P+ +++ D++S +L EL P+ L +E LA
Sbjct: 267 APEVILGARYGMPIDMWSLGCILAELLTGYPL-LPGEDEGDQLAC 310
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 90 VLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYV 149
+L L ++ I H D+K NILL + ++ I F S + + T ++ F Y
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVI-DFGSSCYEHQRVYTXIQSRF-YR 266
Query: 150 DPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAA 194
P+ +++ D++S +L EL P+ L +E LA
Sbjct: 267 APEVILGARYGMPIDMWSLGCILAELLTGYPL-LPGEDEGDQLAC 310
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 89 RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGY 148
R L Y+HS I H D+K +N+ + + + +I DF + + T GY
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT----------GY 188
Query: 149 VDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
V +++R+ + + + D++S ++ EL
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 144 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT--------- 191
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 192 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 227
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 138 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT--------- 185
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 186 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 89 RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGY 148
R L Y+HS I H D+K +N+ + + + +I DF + + T GY
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMT----------GY 180
Query: 149 VDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
V +++R+ + + + D++S ++ EL
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 214
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 11/110 (10%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI--HEQTDDQLPI 75
V + E+ L H +++K+ +V E++ G L+ YI H + ++
Sbjct: 55 VGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM--- 111
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
E R R+ ++ + Y H + H D+K N+LL AKI+DF
Sbjct: 112 --EAR-RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADF 155
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 138 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT--------- 185
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 186 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 156 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 203
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 204 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 239
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 139 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT--------- 186
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 187 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 180
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 181 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 153 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 200
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 201 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 180
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 181 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 180
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 181 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 89 RVLSYLHSVASIPIYHLDIKSANILLVDKYQA-KISDFRTFKSRAIDRTHLTTQVKVTFG 147
R L+Y+HS+ I H DIK N+LL K+ DF + K +++ +
Sbjct: 152 RSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX--ICSRY 206
Query: 148 YVDPKY-FRSSQFTEKSDVYSFSVVLVELNWTKPI 181
Y P+ F ++ +T D++S V+ EL +P+
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPL 241
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 153 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 200
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 201 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 135 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 182
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 183 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 139 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 186
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 187 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 152 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 199
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 200 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 235
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 152 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 199
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 200 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 235
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 135 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 182
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 183 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 139 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 186
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 187 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 180
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 181 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 135 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT--------- 182
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 183 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 180
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 181 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 143 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 190
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 191 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 226
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 145 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 192
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 193 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 228
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 140 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 187
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 188 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/170 (17%), Positives = 69/170 (40%), Gaps = 11/170 (6%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
++ +K + + ++ E I + H N+V++ E L+++ + G L++
Sbjct: 42 MIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFE-- 99
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA---KI 122
D + + + + ++L + + + H ++K N+LL K + K+
Sbjct: 100 -----DIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKL 154
Query: 123 SDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVL 172
+DF T GY+ P+ R + + D+++ V+L
Sbjct: 155 ADF-GLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 203
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 144 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 191
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 192 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 227
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 180
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 181 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 145 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 192
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 193 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 228
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 145 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 192
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 193 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 228
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 180
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 181 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 130 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 177
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 178 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 213
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 139 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 186
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 187 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 138 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 185
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 186 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 135 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 182
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 183 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 132 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 179
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 180 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 215
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 130 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 177
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 178 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 213
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 129 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 176
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 177 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 180
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 181 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 129 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 176
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 177 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 138 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 185
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 186 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 131 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 178
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 179 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 214
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 180
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 181 -GYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAEL 216
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + +R D
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDF--YLARHTDDE--------M 179
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 129 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 176
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 177 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 13/107 (12%)
Query: 24 EVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLR 82
EV +L Q HRNV++++ E + LV+E + GS+ +IH++ E+
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFN-----ELEAS 114
Query: 83 ITVE-VSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ---AKISDF 125
+ V+ V+ L +LH+ I H D+K NIL Q KI DF
Sbjct: 115 VVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDF 158
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 32.0 bits (71), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 50 LLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKS 109
L+V E + G L+ I ++ D T I + + YLHS I I H D+K
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAF--TEREASEIMKSIGEAIQYLHS---INIAHRDVKP 145
Query: 110 ANILLVDKYQA---KISDF 125
N+L K K++DF
Sbjct: 146 ENLLYTSKRPNAILKLTDF 164
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 13/107 (12%)
Query: 24 EVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLR 82
EV +L Q HRNV++++ E + LV+E + GS+ +IH++ E+
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFN-----ELEAS 114
Query: 83 ITVE-VSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ---AKISDF 125
+ V+ V+ L +LH+ I H D+K NIL Q KI DF
Sbjct: 115 VVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDF 158
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 32.0 bits (71), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 14/137 (10%)
Query: 15 ESNVEQFINEVVILSQINHRNVVKILGCCL--ETEVPLLVYEFIPNGSLYQYIHEQTDDQ 72
E+NV++ E+ +L ++ H+NV++++ E + +V E+ G + + + + +
Sbjct: 50 EANVKK---EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKR 105
Query: 73 LPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF---RTFK 129
P+ ++ L YLHS I H DIK N+LL KIS
Sbjct: 106 FPVCQAHGY--FCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALH 160
Query: 130 SRAIDRTHLTTQVKVTF 146
A D T T+Q F
Sbjct: 161 PFAADDTCRTSQGSPAF 177
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 23 NEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLR 82
NE+ I++Q++H ++ + + +L+ EF+ G L+ I + ++ +
Sbjct: 97 NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRI---AAEDYKMSEAEVIN 153
Query: 83 ITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA--KISDF 125
+ L ++H + I HLDIK NI+ K + KI DF
Sbjct: 154 YMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDF 195
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 20/130 (15%)
Query: 50 LLVYEFIPNGSLYQYIHEQTDDQLPITWEMR-----LRITVEVSRVLSYLHSVASIPIYH 104
+L+ E+ G ++ LP EM +R+ ++ + YLH I H
Sbjct: 105 ILILEYAAGGEIFSLC-------LPELAEMVSENDVIRLIKQILEGVYYLHQNN---IVH 154
Query: 105 LDIKSANILLVDKY---QAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTE 161
LD+K NILL Y KI DF SR I ++ T Y+ P+ T
Sbjct: 155 LDLKPQNILLSSIYPLGDIKIVDFGM--SRKIGHACELREIMGTPEYLAPEILNYDPITT 212
Query: 162 KSDVYSFSVV 171
+D+++ ++
Sbjct: 213 ATDMWNIGII 222
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 31.6 bits (70), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 11/110 (10%)
Query: 18 VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI--HEQTDDQLPI 75
V + E+ L H +++K+ +V E++ G L+ YI + + D++
Sbjct: 60 VGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEK--- 116
Query: 76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
E R R+ ++ + Y H + H D+K N+LL AKI+DF
Sbjct: 117 --ESR-RLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADF 160
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 31.6 bits (70), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + H ++
Sbjct: 156 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMX-- 203
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 204 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 239
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 31.6 bits (70), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 71/166 (42%), Gaps = 31/166 (18%)
Query: 22 INEVVILSQINHR-----NVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQ---TDDQL 73
I+E V INHR N+V+ L +V E+ G L++ I ++D
Sbjct: 57 IDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED-- 114
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA---KISDFRTFKS 130
E R +S V SY H++ + H D+K N LL D A KI DF KS
Sbjct: 115 ----EARFFFQQLISGV-SYCHAMQ---VCHRDLKLENTLL-DGSPAPRLKICDFGYSKS 165
Query: 131 RAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEK-SDVYSFSVVL 172
L +Q K T G Y+ P+ ++ K +DV+S V L
Sbjct: 166 SV-----LHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTL 206
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 70/175 (40%), Gaps = 8/175 (4%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
++ KS + E+ E+ I +++ +VV G + + +V E SL + +
Sbjct: 74 VVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-L 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
H++ +R T++ + YLH+ I H D+K N+ L D KI DF
Sbjct: 133 HKRRKAVTEPEARYFMRQTIQG---VQYLHNNRVI---HRDLKLGNLFLNDDMDVKIGDF 186
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
D T T Y+ P+ + + D++S +L L KP
Sbjct: 187 GLATKIEFDGERKKTLCG-TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP 240
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 31.2 bits (69), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 68/159 (42%), Gaps = 26/159 (16%)
Query: 24 EVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQ---TDDQLPITWEMR 80
E++ + H N+V+ L +V E+ G L++ I ++D E R
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED------EAR 118
Query: 81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA---KISDFRTFKSRAIDRTH 137
+S V SY H++ + H D+K N LL D A KI DF KS
Sbjct: 119 FFFQQLISGV-SYCHAMQ---VCHRDLKLENTLL-DGSPAPRLKICDFGYSKSSV----- 168
Query: 138 LTTQVKVTFG---YVDPKYFRSSQFTEK-SDVYSFSVVL 172
L +Q K T G Y+ P+ ++ K +DV+S V L
Sbjct: 169 LHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTL 207
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 31.2 bits (69), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 10/74 (13%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLV-----DKYQAKISDFRTFKSRAIDRTHLT- 139
+ + L++LHS+ I H D+K NIL+ K +A ISDF K A+ R +
Sbjct: 126 QTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSR 182
Query: 140 -TQVKVTFGYVDPK 152
+ V T G++ P+
Sbjct: 183 RSGVPGTEGWIAPE 196
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 31.2 bits (69), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 13/102 (12%)
Query: 90 VLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKV-TFGY 148
+L +H++ I H D+K AN L+VD K+ DF D T + +V T Y
Sbjct: 120 MLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 178
Query: 149 VDPKYFRSSQFTEKS-----------DVYSFSVVLVELNWTK 179
+ P+ + + ++ DV+S +L + + K
Sbjct: 179 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 220
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 31.2 bits (69), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 13/102 (12%)
Query: 90 VLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKV-TFGY 148
+L +H++ I H D+K AN L+VD K+ DF D T + +V T Y
Sbjct: 116 MLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 174
Query: 149 VDPKYFRSSQFTEKS-----------DVYSFSVVLVELNWTK 179
+ P+ + + ++ DV+S +L + + K
Sbjct: 175 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 216
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI D+ + + T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMT--------- 180
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 181 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 30.8 bits (68), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA-KISDFRTFKSRAIDRTHLTTQVKV 144
++ R + ++HS+ I H DIK N+L+ K K+ DF + K + I +
Sbjct: 149 QLFRAVGFIHSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAK-KLIPSEPSVAXICS 204
Query: 145 TFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPI 181
F ++++T D++S V EL KP+
Sbjct: 205 RFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPL 241
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 30.8 bits (68), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 13/102 (12%)
Query: 90 VLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKV-TFGY 148
+L +H++ I H D+K AN L+VD K+ DF D T + +V T Y
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 222
Query: 149 VDPKYFRSSQFTEKS-----------DVYSFSVVLVELNWTK 179
+ P+ + + ++ DV+S +L + + K
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 30.8 bits (68), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 68/166 (40%), Gaps = 34/166 (20%)
Query: 24 EVVILSQINHRNVVKIL-----GCCLETEVPLLVYEFIPNGSLYQYIHEQ--TDDQLPIT 76
E+ +L + H NV+ +L LE + + + L + Q TDD +
Sbjct: 100 ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 158
Query: 77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT 136
+ ++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 159 ------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 209
Query: 137 HLTTQVKVTFGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + D++S ++ EL
Sbjct: 210 ----------GYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAEL 245
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 30.8 bits (68), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 13/102 (12%)
Query: 90 VLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKV-TFGY 148
+L +H++ I H D+K AN L+VD K+ DF D T + +V T Y
Sbjct: 136 MLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 194
Query: 149 VDPKYFRSSQFTEKS-----------DVYSFSVVLVELNWTK 179
+ P+ + + ++ DV+S +L + + K
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 30.8 bits (68), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 13/102 (12%)
Query: 90 VLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKV-TFGY 148
+L +H++ I H D+K AN L+VD K+ DF D T + +V T Y
Sbjct: 117 MLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 175
Query: 149 VDPKYFRSSQFTEKS-----------DVYSFSVVLVELNWTK 179
+ P+ + + ++ DV+S +L + + K
Sbjct: 176 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 30.8 bits (68), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI D R + R H ++
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILD------RGLAR-HTDDEMT-- 180
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 181 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 27/143 (18%)
Query: 55 FIPNG-SLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANIL 113
F P G SLY+ I + I +++L +E+ + L+YL ++ + H D+K NIL
Sbjct: 115 FEPLGPSLYEIITRNNYNGFHIE-DIKL-YCIEILKALNYLRKMS---LTHTDLKPENIL 169
Query: 114 LVDKYQAK--ISDFRTFKSRAID--RTHLTTQVKVTFG-----------------YVDPK 152
L D Y K I+ R + I RT T + FG Y P+
Sbjct: 170 LDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPE 229
Query: 153 YFRSSQFTEKSDVYSFSVVLVEL 175
+ + SD++SF VL EL
Sbjct: 230 VILNLGWDVSSDMWSFGCVLAEL 252
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 70/175 (40%), Gaps = 8/175 (4%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
++ KS + E+ E+ I +++ +VV G + + +V E SL + +
Sbjct: 58 VVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-L 116
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
H++ +R T++ + YLH+ I H D+K N+ L D KI DF
Sbjct: 117 HKRRKAVTEPEARYFMRQTIQG---VQYLHNNRVI---HRDLKLGNLFLNDDMDVKIGDF 170
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
D + T Y+ P+ + + D++S +L L KP
Sbjct: 171 GLATKIEFD-GERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP 224
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 13/102 (12%)
Query: 90 VLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKV-TFGY 148
+L +H++ I H D+K AN L+VD K+ DF D T + +V T Y
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 222
Query: 149 VDPKYFRSSQFTEKS-----------DVYSFSVVLVELNWTK 179
+ P+ + + ++ DV+S +L + + K
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + H ++
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMA-- 180
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
G+V +++R+ + + + D++S ++ EL
Sbjct: 181 -GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + H ++
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMA-- 180
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
G+V +++R+ + + + D++S ++ EL
Sbjct: 181 -GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + H ++
Sbjct: 129 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMA-- 176
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
G+V +++R+ + + + D++S ++ EL
Sbjct: 177 -GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 63/162 (38%), Gaps = 8/162 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E+ E+ I + H++VV G + + +V E SL + +H++
Sbjct: 62 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR 120
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
LR ++ YLH I H D+K N+ L + + KI DF D
Sbjct: 121 YYLR---QIVLGCQYLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 174
Query: 139 TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
T T Y+ P+ + + DV+S ++ L KP
Sbjct: 175 KTLCG-TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 215
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 63/162 (38%), Gaps = 8/162 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E+ E+ I + H++VV G + + +V E SL + +H++
Sbjct: 62 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR 120
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
LR ++ YLH I H D+K N+ L + + KI DF D
Sbjct: 121 YYLR---QIVLGCQYLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 174
Query: 139 TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
T T Y+ P+ + + DV+S ++ L KP
Sbjct: 175 KTLCG-TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 215
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 70/175 (40%), Gaps = 8/175 (4%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
++ KS + E+ E+ I +++ +VV G + + +V E SL + +
Sbjct: 74 VVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-L 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
H++ +R T++ + YLH+ I H D+K N+ L D KI DF
Sbjct: 133 HKRRKAVTEPEARYFMRQTIQG---VQYLHNNRVI---HRDLKLGNLFLNDDMDVKIGDF 186
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
D + T Y+ P+ + + D++S +L L KP
Sbjct: 187 GLATKIEFD-GERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP 240
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 63/162 (38%), Gaps = 8/162 (4%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E+ E+ I + H++VV G + + +V E SL + +H++
Sbjct: 66 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR 124
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
LR ++ YLH I H D+K N+ L + + KI DF D
Sbjct: 125 YYLR---QIVLGCQYLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 178
Query: 139 TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
T T Y+ P+ + + DV+S ++ L KP
Sbjct: 179 KTLCG-TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 219
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 71/166 (42%), Gaps = 31/166 (18%)
Query: 22 INEVVILSQINHR-----NVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQ---TDDQL 73
I+E V INHR N+V+ L +V E+ G L++ I ++D
Sbjct: 58 IDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED-- 115
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA---KISDFRTFKS 130
E R +S V SY H++ + H D+K N LL D A KI+DF K+
Sbjct: 116 ----EARFFFQQLISGV-SYAHAMQ---VAHRDLKLENTLL-DGSPAPRLKIADFGYSKA 166
Query: 131 RAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEK-SDVYSFSVVL 172
L +Q K G Y+ P+ ++ K +DV+S V L
Sbjct: 167 SV-----LHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTL 207
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 18/104 (17%)
Query: 24 EVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRI 83
E+ IL+ HRN++ + E ++++EFI +++ I+ +E+ R
Sbjct: 51 EISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTS-------AFELNERE 103
Query: 84 TV----EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKIS 123
V +V L +LHS I H DI+ NI+ YQ + S
Sbjct: 104 IVSYVHQVCEALQFLHSH---NIGHFDIRPENII----YQTRRS 140
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI F + + T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMT--------- 180
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 181 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 70/175 (40%), Gaps = 8/175 (4%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
++ KS + E+ E+ I +++ +VV G + + +V E SL + +
Sbjct: 74 VVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-L 132
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
H++ +R T++ + YLH+ I H D+K N+ L D KI DF
Sbjct: 133 HKRRKAVTEPEARYFMRQTIQG---VQYLHNNRVI---HRDLKLGNLFLNDDMDVKIGDF 186
Query: 126 RTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
D + T Y+ P+ + + D++S +L L KP
Sbjct: 187 GLATKIEFD-GERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP 240
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 71/164 (43%), Gaps = 14/164 (8%)
Query: 10 SKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQT 69
+KS + +E+ E+ L + H +++K+ + ++V E+ N L+ YI ++
Sbjct: 47 AKSDMQGRIER---EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRD 102
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
++ + R ++ + Y H I H D+K N+LL + KI+DF
Sbjct: 103 K----MSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADF-GLS 154
Query: 130 SRAIDRTHLTTQVKVTFGYVDPKYFRSSQFT-EKSDVYSFSVVL 172
+ D L T + Y P+ + + DV+S V+L
Sbjct: 155 NIMTDGNFLKTSCG-SPNYAAPEVISGKLYAGPEVDVWSCGVIL 197
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 70/164 (42%), Gaps = 14/164 (8%)
Query: 10 SKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQT 69
+KS + +E+ E+ L + H +++K+ + ++V E+ N L+ YI ++
Sbjct: 53 AKSDMQGRIER---EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRD 108
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
++ + R ++ + Y H I H D+K N+LL + KI+DF
Sbjct: 109 K----MSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADF-GLS 160
Query: 130 SRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVL 172
+ D L T + Y P+ + DV+S V+L
Sbjct: 161 NIMTDGNFLKTSCG-SPNYAAPEVISGKLYAGPEVDVWSCGVIL 203
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 71/164 (43%), Gaps = 14/164 (8%)
Query: 10 SKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQT 69
+KS + +E+ E+ L + H +++K+ + ++V E+ N L+ YI ++
Sbjct: 43 AKSDMQGRIER---EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRD 98
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
++ + R ++ + Y H I H D+K N+LL + KI+DF
Sbjct: 99 K----MSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADF-GLS 150
Query: 130 SRAIDRTHLTTQVKVTFGYVDPKYFRSSQFT-EKSDVYSFSVVL 172
+ D L T + Y P+ + + DV+S V+L
Sbjct: 151 NIMTDGNFLKTSCG-SPNYAAPEVISGKLYAGPEVDVWSCGVIL 193
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 70/164 (42%), Gaps = 14/164 (8%)
Query: 10 SKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQT 69
+KS + +E+ E+ L + H +++K+ + ++V E+ N L+ YI ++
Sbjct: 52 AKSDMQGRIER---EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRD 107
Query: 70 DDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFK 129
++ + R ++ + Y H I H D+K N+LL + KI+DF
Sbjct: 108 K----MSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADF-GLS 159
Query: 130 SRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKS-DVYSFSVVL 172
+ D L T + Y P+ + DV+S V+L
Sbjct: 160 NIMTDGNFLKTSCG-SPNYAAPEVISGKLYAGPEVDVWSCGVIL 202
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 23 NEVVILSQINHRNVVKILGCCLETEVP------LLVYEFIPN--GSLYQYIHEQTDDQLP 74
E+ +L + H NV+ +L E LV F+ G L + HE+ +
Sbjct: 73 RELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK--HEKLGED-- 128
Query: 75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAID 134
RI V ++L L + + I H D+K N+ + + + KI DF +R D
Sbjct: 129 -------RIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGL--ARQAD 179
Query: 135 RTHLTTQVKVTFGYVDPKYFRS-SQFTEKSDVYSFSVVLVEL 175
+ + V VT Y P+ + ++T+ D++S ++ E+
Sbjct: 180 -SEMXGXV-VTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEM 219
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + + T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 180
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
G V +++R+ + + + D++S ++ EL
Sbjct: 181 -GXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI D + + T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMT--------- 180
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 181 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 10/69 (14%)
Query: 46 TEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHL 105
+ P LV+E + N Q TD +++R + E+ + L Y HS+ I H
Sbjct: 106 SRTPALVFEHVNNTDFKQLYQTLTD------YDIRFYM-YEILKALDYCHSMG---IMHR 155
Query: 106 DIKSANILL 114
D+K N+L+
Sbjct: 156 DVKPHNVLI 164
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI D + + T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMT--------- 180
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
GYV +++R+ + + + D++S ++ EL
Sbjct: 181 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 14/178 (7%)
Query: 6 LLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYI 65
++ KS + E+ E+ I + H++VV G + + +V E SL + +
Sbjct: 47 IVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-L 105
Query: 66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDF 125
H++ LR ++ YLH I H D+K N+ L + + KI DF
Sbjct: 106 HKRRKALTEPEARYYLR---QIVLGCQYLHRNRVI---HRDLKLGNLFLNEDLEVKIGDF 159
Query: 126 RTFKSRAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
A + + KV G Y+ P+ + + DV+S ++ L KP
Sbjct: 160 ----GLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 213
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 90 VLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKV-TFGY 148
+L +H++ I H D+K AN L+VD K+ DF D + +V T Y
Sbjct: 136 MLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDXXXVVKDSQVGTVNY 194
Query: 149 VDPKYFRSSQFTEKS-----------DVYSFSVVLVELNWTK 179
+ P+ + + ++ DV+S +L + + K
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 66/165 (40%), Gaps = 14/165 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E+ E+ I + H++VV G + + +V E SL + +H++
Sbjct: 84 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR 142
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
LR ++ YLH I H D+K N+ L + + KI DF A +
Sbjct: 143 YYLR---QIVLGCQYLHRNRVI---HRDLKLGNLFLNEDLEVKIGDF----GLATKVEYD 192
Query: 139 TTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
+ KV G Y+ P+ + + DV+S ++ L KP
Sbjct: 193 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 237
>pdb|3U44|B Chain B, Crystal Structure Of Addab-Dna Complex
pdb|3U4Q|B Chain B, Structure Of Addab-Dna Complex At 2.8 Angstroms
Length = 1166
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 58/163 (35%), Gaps = 35/163 (21%)
Query: 85 VEVSRVLSYLHS-------VASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH 137
+E S YLHS IP+ DIK A+I + YQ +FR + + H
Sbjct: 172 MEKSLADQYLHSEDYLTLLAEHIPLAE-DIKGAHIYVDGFYQFTPQEFRVLEQLMVHAEH 230
Query: 138 LTTQVKVT-------------FGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP---- 180
+T + F Y+R Q K+ + + EL+ T+
Sbjct: 231 ITFSLTADKPSYEREPHELELFRMTGKTYYRLHQ---KAKELNLDITYKELSGTERHTKT 287
Query: 181 ---IHLVDVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLNG 220
HL E R Y AEK+E +T A R L G
Sbjct: 288 PELAHLEAQYEARPAIPY----AEKQEALTVMQAANRRAELEG 326
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 86 EVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT 145
++ R L Y+HS I H D+K +N+ + + + KI DF + H ++
Sbjct: 153 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMX-- 200
Query: 146 FGYVDPKYFRSSQ-------FTEKSDVYSFSVVLVEL 175
G V +++R+ + + + D++S ++ EL
Sbjct: 201 -GXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 66/165 (40%), Gaps = 14/165 (8%)
Query: 19 EQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE 78
E+ E+ I + H++VV G + + +V E SL + +H++
Sbjct: 86 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR 144
Query: 79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL 138
LR ++ YLH I H D+K N+ L + + KI DF A +
Sbjct: 145 YYLR---QIVLGCQYLHRNRVI---HRDLKLGNLFLNEDLEVKIGDF----GLATKVEYD 194
Query: 139 TTQVKVTFG---YVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKP 180
+ KV G Y+ P+ + + DV+S ++ L KP
Sbjct: 195 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 239
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 90 VLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKV-TFGY 148
+L +H++ I H D+K AN L+VD K+ DF D T + +V Y
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGAVNY 222
Query: 149 VDPKYFRSSQFTEKS-----------DVYSFSVVLVELNWTK 179
+ P+ + + ++ DV+S +L + + K
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|1H99|A Chain A, Prd Of Lict Antiterminator From Bacillus Subtilis
Length = 224
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query: 94 LHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKY 153
+ + SI YH I+ L Y ++D + F R + TH+ ++ V KY
Sbjct: 126 MEEILSIVKYHFKIEFNEESL--HYYRFVTDLKFFAQRLFNGTHMESEDDFLLDTVKEKY 183
Query: 154 FRSSQFTEKSDVY 166
R+ + T+K Y
Sbjct: 184 HRAYECTKKIQTY 196
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 70/166 (42%), Gaps = 31/166 (18%)
Query: 22 INEVVILSQINHR-----NVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQ---TDDQL 73
I+E V INHR N+V+ L +V E+ G L++ I ++D
Sbjct: 58 IDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED-- 115
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA---KISDFRTFKS 130
E R +S V SY H++ + H D+K N LL D A KI F KS
Sbjct: 116 ----EARFFFQQLISGV-SYCHAMQ---VCHRDLKLENTLL-DGSPAPRLKICAFGYSKS 166
Query: 131 RAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEK-SDVYSFSVVL 172
L +Q K T G Y+ P+ ++ K +DV+S V L
Sbjct: 167 SV-----LHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTL 207
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 94 LHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKY 153
+ SV + H DIK NIL+ +++DF + D T ++ T Y+ P+
Sbjct: 188 IDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEI 247
Query: 154 FRS-----SQFTEKSDVYSFSVVLVEL 175
++ ++ + D +S V + E+
Sbjct: 248 LQAMEGGKGRYGPECDWWSLGVCMYEM 274
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/94 (20%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 87 VSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTF 146
+ ++ + S+ + H DIK N+LL +++DF + D T ++ T
Sbjct: 181 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTP 240
Query: 147 GYVDPKYFRS-----SQFTEKSDVYSFSVVLVEL 175
Y+ P+ ++ ++ + D +S V + E+
Sbjct: 241 DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEM 274
>pdb|3CES|A Chain A, Crystal Structure Of E.Coli Mnmg (Gida), A
Highly-Conserved Trna Modifying Enzyme
pdb|3CES|B Chain B, Crystal Structure Of E.Coli Mnmg (Gida), A
Highly-Conserved Trna Modifying Enzyme
pdb|3CES|C Chain C, Crystal Structure Of E.Coli Mnmg (Gida), A
Highly-Conserved Trna Modifying Enzyme
pdb|3CES|D Chain D, Crystal Structure Of E.Coli Mnmg (Gida), A
Highly-Conserved Trna Modifying Enzyme
Length = 651
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Query: 125 FRTFKSRAIDRTHLT--------TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN 176
+R F SRA R L T++ G VD + R ++F EK + ++
Sbjct: 448 YRMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDE--RWARFNEKLENIERERQRLKST 505
Query: 177 WTKPIHLVDVEENRSLAAYFSKEAEKEEVI 206
W P E N L A S+EA E+++
Sbjct: 506 WVTPSAEAAAEVNAHLTAPLSREASGEDLL 535
>pdb|3CP2|A Chain A, Crystal Structure Of Gida From E. Coli
Length = 649
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Query: 125 FRTFKSRAIDRTHLT--------TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN 176
+R F SRA R L T++ G VD + R ++F EK + ++
Sbjct: 446 YRMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDE--RWARFNEKLENIERERQRLKST 503
Query: 177 WTKPIHLVDVEENRSLAAYFSKEAEKEEVI 206
W P E N L A S+EA E+++
Sbjct: 504 WVTPSAEAAAEVNAHLTAPLSREASGEDLL 533
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/94 (20%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 87 VSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTF 146
+ ++ + S+ + H DIK N+LL +++DF + D T ++ T
Sbjct: 197 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTP 256
Query: 147 GYVDPKYFRS-----SQFTEKSDVYSFSVVLVEL 175
Y+ P+ ++ ++ + D +S V + E+
Sbjct: 257 DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEM 290
>pdb|3G05|A Chain A, Crystal Structure Of N-Terminal Domain (2-550) Of E.Coli
Mnmg
pdb|3G05|B Chain B, Crystal Structure Of N-Terminal Domain (2-550) Of E.Coli
Mnmg
Length = 576
Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Query: 125 FRTFKSRAIDRTHLT--------TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN 176
+R F SRA R L T++ G VD + R ++F EK + ++
Sbjct: 452 YRMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDE--RWARFNEKLENIERERQRLKST 509
Query: 177 WTKPIHLVDVEENRSLAAYFSKEAEKEEVI 206
W P E N L A S+EA E+++
Sbjct: 510 WVTPSAEAAAEVNAHLTAPLSREASGEDLL 539
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 28.1 bits (61), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 92 SYLHSVASI---PIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGY 148
S L S+A++ +H D++ N+++ + A++ DF + + D + T V+ F +
Sbjct: 347 SLLRSLAALEKKGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVF 406
Query: 149 VDPKYFRS---SQFTEKSDVYSFSVVLVELNW 177
V+ + + + F + V+ F++ NW
Sbjct: 407 VNELFAENKSWNGFWRSAPVHPFNLPQPWSNW 438
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 28.1 bits (61), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 70/166 (42%), Gaps = 31/166 (18%)
Query: 22 INEVVILSQINHR-----NVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQ---TDDQL 73
I+E V INHR N+V+ L +V E+ G L++ I ++D
Sbjct: 58 IDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED-- 115
Query: 74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQA---KISDFRTFKS 130
E R +S V SY H++ + H D+K N LL D A KI F KS
Sbjct: 116 ----EARFFFQQLISGV-SYCHAMQ---VCHRDLKLENTLL-DGSPAPRLKICAFGYSKS 166
Query: 131 RAIDRTHLTTQVKVTFG---YVDPKYFRSSQFTEK-SDVYSFSVVL 172
L +Q K T G Y+ P+ ++ K +DV+S V L
Sbjct: 167 SV-----LHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTL 207
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 27.7 bits (60), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 92 SYLHSVASI---PIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGY 148
S L S+A++ +H D++ N+++ + A++ DF + + D + T V+ F +
Sbjct: 347 SLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVF 406
Query: 149 VDPKYFRS---SQFTEKSDVYSFSVVLVELNW 177
V+ + + + F + V+ F++ NW
Sbjct: 407 VNELFAENKSWNGFWRSAPVHPFNLPQPWSNW 438
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 27.7 bits (60), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 79/205 (38%), Gaps = 42/205 (20%)
Query: 9 KSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQ 68
K + ++ +VE+ EV ++ +++H N+ ++ + + LV E G L ++
Sbjct: 63 KIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVF 122
Query: 69 TDDQL--------------------------------PITWEMRLRITVEVSR-VLSYLH 95
DD + + R ++ + R + S LH
Sbjct: 123 IDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALH 182
Query: 96 SVASIPIYHLDIKSANILLV--DKYQAKISDFRT----FKSRAIDRTHLTTQVKVTFGYV 149
+ + I H DIK N L ++ K+ DF +K + +TT+ + +V
Sbjct: 183 YLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPY-FV 241
Query: 150 DPKYFRSSQ--FTEKSDVYSFSVVL 172
P+ ++ + K D +S V+L
Sbjct: 242 APEVLNTTNESYGPKCDAWSAGVLL 266
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 27.7 bits (60), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 92 SYLHSVASI---PIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGY 148
S L S+A++ +H D++ N+++ + A++ DF + + D + T V+ F +
Sbjct: 347 SLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVF 406
Query: 149 VDPKYFRS---SQFTEKSDVYSFSVVLVELNW 177
V+ + + + F + V+ F++ NW
Sbjct: 407 VNELFAENKSWNGFWRSAPVHPFNLPQPWSNW 438
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,655,095
Number of Sequences: 62578
Number of extensions: 284045
Number of successful extensions: 2547
Number of sequences better than 100.0: 979
Number of HSP's better than 100.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 564
Number of HSP's that attempted gapping in prelim test: 1199
Number of HSP's gapped (non-prelim): 994
length of query: 290
length of database: 14,973,337
effective HSP length: 98
effective length of query: 192
effective length of database: 8,840,693
effective search space: 1697413056
effective search space used: 1697413056
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)