Query         044846
Match_columns 290
No_of_seqs    201 out of 1510
Neff          9.6 
Searched_HMMs 29240
Date          Mon Mar 25 12:37:38 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044846.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044846hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4asz_A BDNF/NT-3 growth factor 100.0 1.6E-56 5.6E-61  387.1  17.3  234    2-239    43-290 (299)
  2 4aoj_A High affinity nerve gro 100.0   7E-56 2.4E-60  388.1  18.6  234    2-239    71-320 (329)
  3 4b9d_A Serine/threonine-protei 100.0 8.6E-56   3E-60  388.5  16.8  226    2-234    49-279 (350)
  4 4fih_A Serine/threonine-protei 100.0 1.7E-55 5.7E-60  386.1  15.5  225    2-236    99-328 (346)
  5 3omv_A RAF proto-oncogene seri 100.0 9.3E-55 3.2E-59  376.6  19.7  231    3-240    59-302 (307)
  6 4gt4_A Tyrosine-protein kinase 100.0 5.1E-55 1.7E-59  379.3  17.0  231    2-236    56-304 (308)
  7 3fpq_A Serine/threonine-protei 100.0 3.6E-54 1.2E-58  370.2  18.3  224    2-234    51-285 (290)
  8 4g3f_A NF-kappa-beta-inducing  100.0 2.1E-54 7.3E-59  378.0  16.6  226    2-240    83-318 (336)
  9 4fie_A Serine/threonine-protei 100.0 2.3E-54   8E-59  387.7  16.9  225    2-236   176-405 (423)
 10 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.6E-54 5.5E-59  374.6  13.2  223    2-232    57-285 (311)
 11 4ase_A Vascular endothelial gr 100.0 3.6E-53 1.2E-57  373.9  16.4  233    3-238    95-347 (353)
 12 3hyh_A Carbon catabolite-derep 100.0 9.2E-53 3.1E-57  358.6  17.1  223    2-235    38-266 (275)
 13 3ubd_A Ribosomal protein S6 ki 100.0 1.6E-53 5.6E-58  368.0   9.5  224    2-234    52-284 (304)
 14 4g31_A Eukaryotic translation  100.0 5.1E-52 1.8E-56  359.3  17.6  225    2-233    30-281 (299)
 15 3hmm_A TGF-beta receptor type- 100.0 5.7E-52 1.9E-56  360.2  14.6  230    2-239    26-298 (303)
 16 4b99_A Mitogen-activated prote 100.0 2.2E-49 7.5E-54  355.3  16.6  226    2-235    79-348 (398)
 17 4f9c_A Cell division cycle 7-r 100.0 2.6E-48 8.9E-53  344.6  19.4  221    2-234    49-355 (361)
 18 3uto_A Twitchin; kinase, muscl 100.0 6.9E-48 2.4E-52  360.8  17.3  224    2-234   182-413 (573)
 19 3v5w_A G-protein coupled recep 100.0 1.9E-47 6.6E-52  358.0  16.5  223    2-234   214-452 (689)
 20 3s95_A LIMK-1, LIM domain kina 100.0 1.8E-45 6.1E-50  320.2  18.5  235    2-242    35-286 (310)
 21 3fxz_A Serine/threonine-protei 100.0 5.7E-45   2E-49  315.6  18.1  224    2-234    45-272 (297)
 22 2qkw_B Protein kinase; three-h 100.0 1.6E-44 5.4E-49  315.8  18.3  234    2-238    63-315 (321)
 23 3zgw_A Maternal embryonic leuc 100.0 6.1E-45 2.1E-49  321.9  15.8  227    2-236    35-265 (347)
 24 3uim_A Brassinosteroid insensi 100.0 1.2E-44 4.1E-49  317.0  15.4  235    2-236    54-309 (326)
 25 3fe3_A MAP/microtubule affinit 100.0 1.9E-44 6.6E-49  316.5  16.5  224    2-235    40-268 (328)
 26 2psq_A Fibroblast growth facto 100.0   4E-44 1.4E-48  319.5  18.8  234    3-240   114-366 (370)
 27 3ugc_A Tyrosine-protein kinase 100.0 1.2E-44 4.1E-49  312.7  14.9  233    2-240    39-293 (295)
 28 3p86_A Serine/threonine-protei 100.0 5.2E-44 1.8E-48  311.3  18.4  236    2-240    60-300 (309)
 29 3qd2_B Eukaryotic translation  100.0 9.3E-44 3.2E-48  311.4  19.5  228    2-233    31-327 (332)
 30 3kul_A Ephrin type-A receptor  100.0 4.2E-44 1.4E-48  314.0  17.0  232    3-240    78-315 (325)
 31 4eqm_A Protein kinase; transfe 100.0 1.6E-43 5.5E-48  306.0  20.2  230    2-238    36-275 (294)
 32 1o6l_A RAC-beta serine/threoni 100.0 9.5E-44 3.2E-48  313.1  18.8  224    2-234    30-263 (337)
 33 4hcu_A Tyrosine-protein kinase 100.0 4.8E-44 1.7E-48  305.0  16.1  229    2-238    34-266 (269)
 34 3c0i_A Peripheral plasma membr 100.0 1.4E-43 4.9E-48  313.8  18.9  228    2-235    49-290 (351)
 35 3cbl_A C-FES, proto-oncogene t 100.0 2.6E-44   9E-49  321.5  14.1  231    2-238   139-374 (377)
 36 2yab_A Death-associated protei 100.0 1.7E-43 5.7E-48  314.3  19.1  224    2-235    37-276 (361)
 37 3vhe_A Vascular endothelial gr 100.0 8.6E-44 2.9E-48  315.5  17.2  235    2-239    52-356 (359)
 38 2c30_A Serine/threonine-protei 100.0 1.9E-43 6.5E-48  309.3  18.8  226    2-237    70-300 (321)
 39 3tt0_A Basic fibroblast growth 100.0 1.8E-43 6.1E-48  316.6  18.4  235    3-241   102-355 (382)
 40 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.3E-43 4.5E-48  302.0  16.6  230    2-238    32-264 (268)
 41 3l9p_A Anaplastic lymphoma kin 100.0 7.2E-44 2.5E-48  317.5  15.1  235    2-240   101-347 (367)
 42 4fvq_A Tyrosine-protein kinase 100.0 3.7E-44 1.3E-48  308.6  12.7  226    3-239    41-276 (289)
 43 3tki_A Serine/threonine-protei 100.0 2.6E-44 8.9E-49  315.1  11.8  227    2-235    32-265 (323)
 44 3gni_B Strad alpha; kinase fol 100.0 3.1E-43 1.1E-47  315.6  18.6  228    2-234    52-336 (389)
 45 2y0a_A Death-associated protei 100.0 4.4E-43 1.5E-47  307.6  19.1  224    2-235    36-275 (326)
 46 1tki_A Titin; serine kinase, m 100.0 2.8E-43 9.6E-48  308.2  17.7  225    2-236    30-262 (321)
 47 1opk_A P150, C-ABL, proto-onco 100.0 1.4E-43 4.7E-48  327.4  16.5  230    2-238   245-478 (495)
 48 2qol_A Ephrin receptor; recept 100.0 1.9E-43 6.5E-48  315.5  16.6  232    2-240    73-311 (373)
 49 3soc_A Activin receptor type-2 100.0   1E-43 3.6E-48  311.0  14.6  229    2-239    47-319 (322)
 50 3soa_A Calcium/calmodulin-depe 100.0 5.1E-43 1.7E-47  319.1  19.4  225    2-235    36-271 (444)
 51 2bdw_A Hypothetical protein K1 100.0   4E-43 1.4E-47  312.1  18.1  223    2-234    54-287 (362)
 52 1mp8_A Focal adhesion kinase 1 100.0 2.7E-43 9.1E-48  302.4  16.1  229    3-239    44-277 (281)
 53 4dc2_A Protein kinase C IOTA t 100.0 2.3E-43 7.8E-48  316.7  16.3  225    2-234    77-321 (396)
 54 2ivs_A Proto-oncogene tyrosine 100.0 3.1E-43 1.1E-47  306.1  16.7  233    3-238    54-311 (314)
 55 1luf_A Muscle-specific tyrosin 100.0 2.4E-43 8.3E-48  310.6  15.9  234    3-240    78-337 (343)
 56 3lb7_A RAF proto-oncogene seri 100.0 8.7E-43   3E-47  303.3  19.1  231    3-240    59-302 (307)
 57 3gen_A Tyrosine-protein kinase 100.0 2.1E-43 7.2E-48  303.1  14.9  230    2-238    48-280 (283)
 58 1k9a_A Carboxyl-terminal SRC k 100.0 4.5E-43 1.6E-47  320.4  17.9  225    2-238   216-445 (450)
 59 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.3E-43 4.3E-48  314.3  13.6  224    2-234    48-283 (353)
 60 1rjb_A FL cytokine receptor; k 100.0 4.2E-43 1.4E-47  309.4  16.7  235    3-240    76-336 (344)
 61 1qcf_A Haematopoetic cell kina 100.0 9.9E-44 3.4E-48  325.1  13.1  230    2-238   212-444 (454)
 62 3a8x_A Protein kinase C IOTA t 100.0 5.4E-43 1.9E-47  309.4  17.1  225    2-234    34-278 (345)
 63 2x4f_A Myosin light chain kina 100.0 4.5E-43 1.5E-47  313.0  16.7  225    2-235   114-346 (373)
 64 1fot_A TPK1 delta, CAMP-depend 100.0 5.1E-43 1.7E-47  306.2  16.4  221    2-234    31-261 (318)
 65 4euu_A Serine/threonine-protei 100.0 4.5E-42 1.5E-46  300.0  22.4  229    2-236    34-307 (319)
 66 3lxl_A Tyrosine-protein kinase 100.0   4E-43 1.4E-47  307.7  15.7  233    2-240    52-305 (327)
 67 3p1a_A MYT1 kinase, membrane-a 100.0 9.9E-43 3.4E-47  303.4  18.0  223    2-234    82-307 (311)
 68 3kfa_A Tyrosine-protein kinase 100.0   8E-43 2.7E-47  300.1  17.2  233    2-240    38-273 (288)
 69 3cc6_A Protein tyrosine kinase 100.0 7.6E-43 2.6E-47  299.4  16.9  229    4-239    42-274 (281)
 70 1t46_A HOMO sapiens V-KIT hard 100.0 1.1E-42 3.6E-47  302.6  18.0  236    2-240    53-309 (313)
 71 2izr_A Casein kinase I isoform 100.0   3E-42   1E-46  302.6  20.7  230    2-241    34-284 (330)
 72 3t9t_A Tyrosine-protein kinase 100.0 5.6E-43 1.9E-47  297.7  15.4  229    2-238    32-264 (267)
 73 1rdq_E PKA C-alpha, CAMP-depen 100.0 8.2E-43 2.8E-47  308.8  16.7  222    2-235    66-297 (350)
 74 3q4u_A Activin receptor type-1 100.0 1.2E-42 4.1E-47  300.7  17.2  224    2-236    31-300 (301)
 75 3dtc_A Mitogen-activated prote 100.0   7E-43 2.4E-47  297.9  15.6  227    2-236    30-271 (271)
 76 3o0g_A Cell division protein k 100.0 1.4E-42 4.7E-47  299.5  17.4  225    2-234    27-285 (292)
 77 4fr4_A YANK1, serine/threonine 100.0 8.7E-43   3E-47  311.8  16.5  223    2-233    40-273 (384)
 78 3niz_A Rhodanese family protei 100.0 1.4E-42 4.6E-47  302.5  17.3  225    2-234    45-303 (311)
 79 3poz_A Epidermal growth factor 100.0 8.1E-43 2.8E-47  306.0  15.8  230    4-240    46-280 (327)
 80 2nru_A Interleukin-1 receptor- 100.0 8.1E-42 2.8E-46  296.5  21.9  232    2-238    54-306 (307)
 81 1xjd_A Protein kinase C, theta 100.0 3.6E-43 1.2E-47  310.3  13.5  224    2-234    42-272 (345)
 82 3lxp_A Non-receptor tyrosine-p 100.0   1E-42 3.5E-47  304.1  16.3  231    2-240    60-312 (318)
 83 4e5w_A Tyrosine-protein kinase 100.0   3E-42   1E-46  298.4  18.9  230    2-237    50-301 (302)
 84 1kob_A Twitchin; kinase, intra 100.0 1.1E-42 3.6E-47  311.8  16.5  224    2-234    76-307 (387)
 85 1csn_A Casein kinase-1; phosph 100.0 6.9E-42 2.4E-46  295.5  20.9  230    2-240    35-285 (298)
 86 3v8s_A RHO-associated protein  100.0 2.2E-43 7.5E-48  318.3  11.6  225    2-235    94-333 (410)
 87 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 4.8E-43 1.6E-47  320.4  13.8  229    3-239   209-441 (452)
 88 3ork_A Serine/threonine protei 100.0 6.2E-43 2.1E-47  304.5  13.8  228    2-236    37-279 (311)
 89 3op5_A Serine/threonine-protei 100.0 3.6E-42 1.2E-46  306.1  18.9  233    2-241    65-332 (364)
 90 3oz6_A Mitogen-activated prote 100.0 1.4E-42 4.7E-47  311.4  16.1  224    2-234    34-331 (388)
 91 3a62_A Ribosomal protein S6 ki 100.0 1.8E-42 6.1E-47  303.8  16.5  225    2-235    45-280 (327)
 92 2wqm_A Serine/threonine-protei 100.0 3.1E-42   1E-46  299.7  17.8  237    2-242    57-301 (310)
 93 1u59_A Tyrosine-protein kinase 100.0 2.8E-42 9.4E-47  296.9  17.1  233    2-242    37-276 (287)
 94 2ac3_A MAP kinase-interacting  100.0 1.3E-42 4.4E-47  302.7  15.2  226    2-234    38-298 (316)
 95 2h34_A Serine/threonine-protei 100.0 3.5E-42 1.2E-46  299.6  17.8  230    2-240    59-298 (309)
 96 3rp9_A Mitogen-activated prote 100.0 3.6E-42 1.2E-46  315.1  18.7  226    2-235    78-400 (458)
 97 2w4o_A Calcium/calmodulin-depe 100.0 8.7E-43   3E-47  308.5  14.1  223    2-235    78-309 (349)
 98 3f3z_A Calcium/calmodulin-depe 100.0 6.4E-42 2.2E-46  292.9  18.9  224    2-235    34-265 (277)
 99 2vd5_A DMPK protein; serine/th 100.0 8.2E-43 2.8E-47  314.7  13.8  226    2-235    86-331 (412)
100 2buj_A Serine/threonine-protei 100.0   1E-42 3.5E-47  303.5  14.0  234    2-238    54-306 (317)
101 2w1i_A JAK2; chromosomal rearr 100.0 2.3E-42 7.7E-47  302.9  16.0  233    2-240    70-324 (326)
102 3uc3_A Serine/threonine-protei 100.0 1.8E-42   6E-47  307.9  15.5  225    2-236    45-279 (361)
103 4ejn_A RAC-alpha serine/threon 100.0 6.8E-43 2.3E-47  318.9  13.2  226    2-235   173-408 (446)
104 3qup_A Tyrosine-protein kinase 100.0 2.7E-42 9.3E-47  301.7  16.2  233    4-240    53-300 (323)
105 2i1m_A Macrophage colony-stimu 100.0   2E-42   7E-47  303.7  15.3  234    3-239    77-327 (333)
106 1mqb_A Ephrin type-A receptor  100.0 3.9E-42 1.3E-46  302.4  17.2  231    3-240    74-311 (333)
107 3lzb_A Epidermal growth factor 100.0 1.6E-42 5.6E-47  304.1  14.6  229    5-240    47-280 (327)
108 2pmi_A Negative RE, cyclin-dep 100.0 2.7E-42 9.3E-47  301.4  15.9  228    2-234    30-296 (317)
109 2ozo_A Tyrosine-protein kinase 100.0 2.9E-42   1E-46  325.9  17.3  231    3-241   364-601 (613)
110 2i0e_A Protein kinase C-beta I 100.0 2.4E-42 8.2E-47  306.0  15.7  224    2-234    45-279 (353)
111 2pvf_A Fibroblast growth facto 100.0   7E-42 2.4E-46  300.7  18.4  236    2-240    67-320 (334)
112 2zv2_A Calcium/calmodulin-depe 100.0 1.9E-42 6.6E-47  299.5  14.6  207   18-234    80-295 (298)
113 3hko_A Calcium/calmodulin-depe 100.0 2.4E-42 8.1E-47  304.6  15.3  230    2-234    51-333 (345)
114 3pls_A Macrophage-stimulating  100.0 5.9E-42   2E-46  295.9  17.5  232    4-241    51-290 (298)
115 3lm5_A Serine/threonine-protei 100.0 1.5E-42 5.3E-47  304.2  13.9  227    2-235    54-291 (327)
116 2xir_A Vascular endothelial gr 100.0 4.1E-42 1.4E-46  299.3  16.3  236    2-240    57-312 (316)
117 3mdy_A Bone morphogenetic prot 100.0 2.4E-41 8.1E-46  297.0  21.3  228    2-240    60-333 (337)
118 3llt_A Serine/threonine kinase 100.0   1E-41 3.4E-46  302.5  19.0  221    2-233    60-357 (360)
119 3kn6_A Ribosomal protein S6 ki 100.0 2.6E-42   9E-47  302.6  15.1  223    2-235    36-274 (325)
120 1ob3_A PFPK5, cell division co 100.0 2.7E-42 9.3E-47  297.2  14.9  225    2-234    26-283 (288)
121 4aw2_A Serine/threonine-protei 100.0 9.5E-43 3.2E-47  316.4  12.6  227    2-235    99-342 (437)
122 2v62_A Serine/threonine-protei 100.0 3.7E-42 1.3E-46  303.9  15.9  229    2-238    65-328 (345)
123 3ttj_A Mitogen-activated prote 100.0 6.3E-42 2.1E-46  313.8  17.9  220    2-234    87-358 (464)
124 4fl3_A Tyrosine-protein kinase 100.0 2.8E-42 9.7E-47  326.9  16.0  231    2-240   396-633 (635)
125 3c1x_A Hepatocyte growth facto 100.0 1.6E-42 5.5E-47  309.4  13.5  231    4-241   119-358 (373)
126 1u5q_A Serine/threonine protei 100.0 3.2E-42 1.1E-46  304.8  15.1  223    2-237    79-311 (348)
127 3f66_A Hepatocyte growth facto 100.0 8.3E-42 2.8E-46  295.2  17.1  231    4-240    55-293 (298)
128 4f0f_A Serine/threonine-protei 100.0 7.8E-42 2.7E-46  293.9  16.9  225    2-236    44-287 (287)
129 2owb_A Serine/threonine-protei 100.0 9.5E-42 3.2E-46  300.1  17.7  227    2-236    66-296 (335)
130 3kmu_A ILK, integrin-linked ki 100.0 3.6E-42 1.2E-46  293.0  14.6  227    2-237    33-269 (271)
131 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.7E-43   2E-47  308.0   9.9  224    2-236    34-263 (336)
132 2a19_B Interferon-induced, dou 100.0 5.8E-42   2E-46  293.8  15.9  225    2-240    36-276 (284)
133 3og7_A AKAP9-BRAF fusion prote 100.0 5.2E-42 1.8E-46  295.6  15.6  228    3-237    47-287 (289)
134 2jam_A Calcium/calmodulin-depe 100.0   1E-41 3.5E-46  295.7  17.3  223    2-235    34-265 (304)
135 2eva_A TAK1 kinase - TAB1 chim 100.0 6.3E-42 2.2E-46  297.7  16.0  230    2-240    31-265 (307)
136 3kk8_A Calcium/calmodulin depe 100.0 1.3E-41 4.6E-46  291.8  17.8  225    2-235    31-265 (284)
137 1nxk_A MAP kinase-activated pr 100.0 2.8E-42 9.6E-47  310.6  14.2  224    2-237    87-327 (400)
138 2a2a_A Death-associated protei 100.0 1.4E-41 4.7E-46  297.2  18.2  223    2-234    37-275 (321)
139 3brb_A Proto-oncogene tyrosine 100.0   9E-42 3.1E-46  297.1  16.8  234    3-240    63-310 (313)
140 1xbb_A Tyrosine-protein kinase 100.0   1E-41 3.5E-46  293.9  17.0  230    2-240    44-281 (291)
141 3fdn_A Serine/threonine-protei 100.0 7.8E-42 2.7E-46  292.8  16.0  226    2-237    34-263 (279)
142 4agu_A Cyclin-dependent kinase 100.0 1.3E-41 4.4E-46  295.7  17.3  225    2-234    28-287 (311)
143 1qpc_A LCK kinase; alpha beta  100.0 6.5E-42 2.2E-46  293.2  15.2  231    2-240    37-271 (279)
144 1x8b_A WEE1HU, WEE1-like prote 100.0 4.7E-42 1.6E-46  294.6  14.3  224    2-234    36-282 (289)
145 2y94_A 5'-AMP-activated protei 100.0 5.3E-42 1.8E-46  314.6  15.6  223    2-234    41-269 (476)
146 1p4o_A Insulin-like growth fac 100.0 1.3E-41 4.3E-46  297.2  16.9  233    2-238    55-299 (322)
147 3ll6_A Cyclin G-associated kin 100.0 4.2E-42 1.4E-46  301.5  13.7  236    2-241    53-311 (337)
148 3dbq_A Dual specificity protei 100.0 6.1E-42 2.1E-46  302.3  14.7  226    2-236    33-278 (343)
149 3c4z_A Rhodopsin kinase; Ser/T 100.0 8.1E-42 2.8E-46  317.1  16.0  229    2-234   210-451 (543)
150 1cm8_A Phosphorylated MAP kina 100.0 2.7E-41 9.2E-46  300.9  18.7  220    2-234    50-310 (367)
151 2h8h_A Proto-oncogene tyrosine 100.0 2.5E-42 8.4E-47  321.8  12.4  229    3-239   292-524 (535)
152 2zmd_A Dual specificity protei 100.0 9.6E-42 3.3E-46  306.2  15.8  225    2-235    80-324 (390)
153 3is5_A Calcium-dependent prote 100.0 1.1E-41 3.9E-46  292.9  15.6  226    2-233    47-280 (285)
154 3g33_A Cell division protein k 100.0 2.5E-41 8.5E-46  293.8  17.8  226    2-235    34-300 (308)
155 3gbz_A Kinase, CMGC CDK; ssgci 100.0 4.4E-42 1.5E-46  301.6  13.1  224    2-234    59-321 (329)
156 3mwu_A Calmodulin-domain prote 100.0 3.1E-41 1.1E-45  311.1  19.3  224    2-236    47-281 (486)
157 3eqc_A Dual specificity mitoge 100.0 1.4E-41 4.7E-46  301.8  16.2  226    2-237    58-330 (360)
158 2jii_A Serine/threonine-protei 100.0   9E-42 3.1E-46  302.2  14.9  229    2-241    75-339 (352)
159 2eue_A Carbon catabolite derep 100.0 1.2E-41 4.2E-46  291.0  15.2  222    2-234    38-265 (275)
160 3kex_A Receptor tyrosine-prote 100.0 2.5E-42 8.7E-47  302.5  11.1  228    5-239    45-277 (325)
161 2yfx_A Tyrosine-protein kinase 100.0 1.5E-41 5.1E-46  297.7  15.9  234    2-239    60-305 (327)
162 2acx_A G protein-coupled recep 100.0 7.3E-42 2.5E-46  318.5  14.7  226    2-234   209-447 (576)
163 3n9x_A Phosphotransferase; mal 100.0 2.1E-41 7.1E-46  307.9  17.4  226    2-235    51-365 (432)
164 1vzo_A Ribosomal protein S6 ki 100.0 2.8E-42 9.6E-47  306.0  11.2  228    2-236    82-326 (355)
165 2r5t_A Serine/threonine-protei 100.0 6.4E-42 2.2E-46  305.4  13.5  217    2-227    63-285 (373)
166 3dls_A PAS domain-containing s 100.0 4.4E-42 1.5E-46  302.4  11.8  220    2-235    49-278 (335)
167 1fvr_A Tyrosine-protein kinase 100.0 1.8E-41   6E-46  297.2  15.5  230    5-240    55-302 (327)
168 3nyv_A Calmodulin-domain prote 100.0 1.5E-41   5E-46  313.1  15.7  224    2-236    51-286 (484)
169 3mtl_A Cell division protein k 100.0 6.1E-42 2.1E-46  300.0  12.5  228    2-237    27-287 (324)
170 2yex_A Serine/threonine-protei 100.0 2.4E-41 8.2E-46  288.9  15.9  226    2-234    32-264 (276)
171 2clq_A Mitogen-activated prote 100.0 2.6E-41 8.8E-46  291.5  16.2  228    2-234    47-281 (295)
172 3bhy_A Death-associated protei 100.0 6.1E-41 2.1E-45  287.6  18.4  223    2-234    30-268 (283)
173 3lij_A Calcium/calmodulin depe 100.0 4.4E-41 1.5E-45  310.7  18.6  223    2-235    62-295 (494)
174 3kvw_A DYRK2, dual specificity 100.0 5.1E-41 1.8E-45  305.0  18.5  224    2-236   122-413 (429)
175 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.4E-41 1.2E-45  299.9  17.0  230    2-240    95-341 (365)
176 1t4h_A Serine/threonine-protei 100.0 8.4E-41 2.9E-45  288.0  18.7  224    2-234    51-285 (290)
177 2qr7_A Ribosomal protein S6 ki 100.0 6.7E-42 2.3E-46  302.0  12.0  223    2-236    47-282 (342)
178 2vgo_A Serine/threonine-protei 100.0 2.6E-41 8.8E-46  290.3  15.3  224    2-236    39-267 (284)
179 3cok_A Serine/threonine-protei 100.0 1.1E-41 3.7E-46  291.6  12.9  225    2-234    36-265 (278)
180 2rku_A Serine/threonine-protei 100.0 4.9E-41 1.7E-45  290.0  17.1  227    2-236    40-270 (294)
181 2j7t_A Serine/threonine-protei 100.0 1.4E-41 4.9E-46  294.2  13.7  225    2-234    44-278 (302)
182 4hgt_A Casein kinase I isoform 100.0 7.1E-41 2.4E-45  288.7  17.9  231    2-241    34-283 (296)
183 1b6c_B TGF-B superfamily recep 100.0 6.7E-41 2.3E-45  294.9  18.2  228    2-240    65-338 (342)
184 1byg_A CSK, protein (C-termina 100.0 9.8E-42 3.3E-46  292.1  12.5  226    2-239    44-274 (278)
185 3byv_A Rhoptry kinase; malaria 100.0 1.3E-42 4.5E-47  310.4   7.2  220    2-233    98-361 (377)
186 2y7j_A Phosphorylase B kinase  100.0 8.9E-41 3.1E-45  297.4  18.9  223    2-234   119-362 (365)
187 3mi9_A Cell division protein k 100.0 4.8E-41 1.6E-45  297.3  16.8  227    2-235    42-315 (351)
188 4aaa_A Cyclin-dependent kinase 100.0 4.4E-41 1.5E-45  295.3  16.3  226    2-235    50-310 (331)
189 3com_A Serine/threonine-protei 100.0 8.3E-41 2.8E-45  291.0  17.8  225    2-235    54-282 (314)
190 3uzp_A CKI-delta, CKID, casein 100.0 1.1E-40 3.8E-45  287.6  18.2  231    2-241    34-283 (296)
191 4eut_A Serine/threonine-protei 100.0 5.1E-41 1.7E-45  302.1  16.6  232    2-239    34-310 (396)
192 3a7i_A MST3 kinase, serine/thr 100.0 8.3E-41 2.8E-45  289.7  17.3  228    2-238    47-277 (303)
193 3q5i_A Protein kinase; CDPK, m 100.0 1.1E-40 3.8E-45  308.7  19.3  224    2-236    61-306 (504)
194 2xrw_A Mitogen-activated prote 100.0 9.2E-41 3.1E-45  297.9  17.8  221    2-235    50-322 (371)
195 3rgf_A Cyclin-dependent kinase 100.0 1.4E-41 4.9E-46  306.4  12.7  230    2-237    48-339 (405)
196 3nsz_A CK II alpha, casein kin 100.0 1.5E-40 5.1E-45  291.4  18.7  218    2-234    61-322 (330)
197 1ua2_A CAK, cell division prot 100.0   3E-41   1E-45  298.2  14.4  226    2-236    35-296 (346)
198 1u46_A ACK-1, activated CDC42  100.0 4.9E-41 1.7E-45  289.2  15.4  227    4-238    48-284 (291)
199 2w5a_A Serine/threonine-protei 100.0   1E-41 3.4E-46  291.9  10.7  235    2-237    31-273 (279)
200 2j0j_A Focal adhesion kinase 1 100.0 8.5E-41 2.9E-45  317.9  17.7  229    3-239   419-652 (656)
201 3gxj_A TGF-beta receptor type- 100.0   8E-43 2.7E-47  301.9   3.4  227    2-239    26-298 (303)
202 3pfq_A PKC-B, PKC-beta, protei 100.0 4.3E-41 1.5E-45  320.8  15.6  223    2-233   366-599 (674)
203 3i6u_A CDS1, serine/threonine- 100.0 3.1E-41 1.1E-45  305.6  13.9  224    2-235   160-403 (419)
204 3g2f_A Bone morphogenetic prot 100.0 1.5E-41 5.3E-46  298.4  11.4  228    2-240    36-320 (336)
205 3qyz_A Mitogen-activated prote 100.0 1.6E-40 5.5E-45  295.5  17.8  225    2-235    52-317 (364)
206 2h6d_A 5'-AMP-activated protei 100.0 1.3E-40 4.6E-45  284.4  16.0  223    2-234    36-264 (276)
207 2fst_X Mitogen-activated prote 100.0 6.8E-41 2.3E-45  298.3  14.3  221    2-235    54-315 (367)
208 1phk_A Phosphorylase kinase; g 100.0 2.9E-40   1E-44  285.4  17.3  223    2-234    42-286 (298)
209 2r3i_A Cell division protein k 100.0 2.3E-40 7.9E-45  286.2  16.7  226    2-234    28-286 (299)
210 3fme_A Dual specificity mitoge 100.0 7.9E-41 2.7E-45  287.7  12.6  230    2-237    32-272 (290)
211 1z57_A Dual specificity protei 100.0 6.2E-40 2.1E-44  287.7  18.0  221    2-233    40-330 (339)
212 3an0_A Dual specificity mitoge 100.0 9.1E-41 3.1E-45  294.2  12.7  230    2-237    76-316 (340)
213 2ycf_A Serine/threonine-protei 100.0 1.4E-40 4.7E-45  291.0  13.7  223    2-234    35-277 (322)
214 2vwi_A Serine/threonine-protei 100.0 3.6E-41 1.2E-45  291.5   9.8  230    2-234    40-290 (303)
215 3q60_A ROP5B; pseudokinase, tr 100.0 2.3E-41 7.9E-46  301.7   8.8  222    2-234    87-355 (371)
216 2i6l_A Mitogen-activated prote 100.0 2.6E-40 9.1E-45  288.0  15.2  224    2-235    36-309 (320)
217 2rio_A Serine/threonine-protei 100.0 2.4E-40 8.2E-45  301.1  15.4  226    2-234    39-298 (434)
218 1zy4_A Serine/threonine-protei 100.0 4.5E-40 1.5E-44  284.3  16.1  223    2-234    31-286 (303)
219 3sv0_A Casein kinase I-like; t 100.0 7.7E-40 2.6E-44  300.7  18.5  230    2-240    32-280 (483)
220 2pml_X PFPK7, Ser/Thr protein  100.0 6.1E-41 2.1E-45  295.9  10.8  225    2-234    54-325 (348)
221 3eb0_A Putative uncharacterize 100.0 1.8E-40 6.2E-45  297.1  13.9  223    2-234    32-324 (383)
222 1wak_A Serine/threonine-protei 100.0 4.2E-40 1.4E-44  295.2  16.0  222    2-234    62-394 (397)
223 3pg1_A Mitogen-activated prote 100.0 3.1E-40 1.1E-44  293.1  14.9  224    2-234    46-319 (362)
224 4exu_A Mitogen-activated prote 100.0 6.4E-40 2.2E-44  292.4  16.9  220    2-235    67-327 (371)
225 1j1b_A Glycogen synthase kinas 100.0 3.5E-40 1.2E-44  298.8  15.0  224    2-235    79-340 (420)
226 2b9h_A MAP kinase FUS3, mitoge 100.0 4.1E-40 1.4E-44  291.2  14.9  225    2-235    36-309 (353)
227 2x7f_A TRAF2 and NCK-interacti 100.0 4.3E-40 1.5E-44  288.0  14.7  225    2-234    49-289 (326)
228 2wtk_C Serine/threonine-protei 100.0   1E-39 3.6E-44  282.8  16.9  227    2-235    30-267 (305)
229 3e3p_A Protein kinase, putativ 100.0 8.8E-40   3E-44  289.8  15.9  227    2-236    48-319 (360)
230 2wei_A Calmodulin-domain prote 100.0   2E-39 6.8E-44  279.0  17.6  223    2-235    47-280 (287)
231 3p23_A Serine/threonine-protei 100.0 7.8E-40 2.7E-44  297.3  15.0  222    2-233    48-285 (432)
232 2vx3_A Dual specificity tyrosi 100.0 3.8E-39 1.3E-43  288.4  19.2  222    2-234    79-375 (382)
233 2eu9_A Dual specificity protei 100.0   3E-39   1E-43  285.3  18.0  221    3-234    46-336 (355)
234 4e7w_A Glycogen synthase kinas 100.0 8.9E-40   3E-44  293.8  14.5  222    3-234    65-324 (394)
235 3cek_A Dual specificity protei 100.0 1.5E-39   5E-44  283.3  14.7  225    2-235    52-296 (313)
236 1blx_A Cyclin-dependent kinase 100.0 1.6E-39 5.6E-44  284.2  14.4  224    2-234    37-299 (326)
237 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.2E-40 4.2E-45  290.5   7.0  231    3-240    56-304 (319)
238 3coi_A Mitogen-activated prote 100.0 3.5E-39 1.2E-43  285.6  15.8  219    2-235    49-309 (353)
239 1q8y_A SR protein kinase; tran 100.0 5.2E-39 1.8E-43  286.1  15.9  223    2-235    44-337 (373)
240 3fhr_A MAP kinase-activated pr 100.0 1.9E-39 6.5E-44  285.6  12.8  222    2-236    54-292 (336)
241 2iwi_A Serine/threonine-protei 100.0 1.2E-39 4.3E-44  283.5  10.3  218    2-234    56-286 (312)
242 3aln_A Dual specificity mitoge 100.0 2.1E-39 7.2E-44  283.9  11.7  230    2-237    47-291 (327)
243 2dyl_A Dual specificity mitoge 100.0 9.9E-39 3.4E-43  278.1  14.1  225    2-235    50-287 (318)
244 3a99_A Proto-oncogene serine/t 100.0 1.4E-39 4.7E-44  284.6   8.2  218    2-234    68-296 (320)
245 2pzi_A Probable serine/threoni 100.0 7.2E-38 2.5E-42  299.6  15.2  216    2-238   106-328 (681)
246 3qa8_A MGC80376 protein; kinas 100.0 3.9E-38 1.3E-42  296.7  12.9  224    2-231    39-297 (676)
247 3uqc_A Probable conserved tran 100.0 5.5E-37 1.9E-41  264.1  14.3  200    2-239    56-266 (286)
248 3m2w_A MAP kinase-activated pr 100.0 5.7E-37 1.9E-41  265.4  14.4  203    2-237    43-262 (299)
249 3dzo_A Rhoptry kinase domain;  100.0 1.5E-37 5.2E-42  280.9   9.5  219    2-232   103-364 (413)
250 2vuw_A Serine/threonine-protei 100.0 2.2E-37 7.4E-42  272.3   9.3  212    2-233    43-333 (336)
251 4azs_A Methyltransferase WBDD; 100.0 5.7E-36 1.9E-40  280.2   5.9  166    2-179   259-435 (569)
252 3en9_A Glycoprotease, O-sialog  99.9 1.9E-26 6.6E-31  214.5   6.7  162    2-180   359-536 (540)
253 1zar_A RIO2 kinase; serine kin  99.8 1.7E-21 5.7E-26  167.0   8.4  121    2-155   114-252 (282)
254 1zth_A RIO1 serine protein kin  99.7 2.8E-17 9.6E-22  138.8   9.3   96   19-130   115-218 (258)
255 4gyi_A RIO2 kinase; protein ki  99.5 1.2E-14   4E-19  128.6   4.1   93   23-130   162-264 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.3 6.8E-12 2.3E-16  105.6   9.0  118    2-128    37-211 (263)
257 1nd4_A Aminoglycoside 3'-phosp  99.1 3.6E-10 1.2E-14   94.5   8.5  112    2-128    44-212 (264)
258 3dxp_A Putative acyl-COA dehyd  99.0 1.2E-09 4.1E-14   96.2   9.7  122    3-130    62-248 (359)
259 3sg8_A APH(2'')-ID; antibiotic  98.9 1.9E-09 6.4E-14   92.7   7.1  171    3-183    41-288 (304)
260 3r70_A Aminoglycoside phosphot  98.7 2.2E-07 7.7E-12   80.3  12.1  116    2-129    57-236 (320)
261 4gkh_A Aminoglycoside 3'-phosp  98.5   8E-07 2.7E-11   74.7  11.5  116    3-129    51-222 (272)
262 3tdw_A Gentamicin resistance p  98.5 1.4E-06 4.9E-11   74.8  12.0  120    2-129    39-223 (306)
263 3ovc_A Hygromycin-B 4-O-kinase  98.1 9.3E-06 3.2E-10   71.4   8.8   55    2-61     64-121 (362)
264 3ats_A Putative uncharacterize  98.1 5.6E-06 1.9E-10   72.4   6.9   61    2-62     52-121 (357)
265 3d1u_A Putative fructosamine-3  98.0 5.3E-05 1.8E-09   64.4  11.1   56    2-61     39-97  (288)
266 2q83_A YTAA protein; 2635576,   97.5  0.0018   6E-08   55.7  13.9   29  100-128   222-250 (346)
267 3jr1_A Putative fructosamine-3  97.4 0.00079 2.7E-08   57.7   9.7   57    2-61     59-118 (312)
268 2yle_A Protein spire homolog 1  97.3  0.0013 4.4E-08   52.9   9.3   98   59-176    33-130 (229)
269 2olc_A MTR kinase, methylthior  97.3   0.001 3.5E-08   58.8   9.3   27  102-129   229-255 (397)
270 3csv_A Aminoglycoside phosphot  97.2  0.0017 5.7E-08   56.0   9.7   29  101-129   184-216 (333)
271 2pyw_A Uncharacterized protein  97.2  0.0033 1.1E-07   56.1  11.3   29  101-130   233-261 (420)
272 3feg_A Choline/ethanolamine ki  96.9  0.0024 8.3E-08   56.2   8.1  122    3-129    83-253 (379)
273 1nw1_A Choline kinase (49.2 KD  96.7  0.0017 5.7E-08   58.3   5.4   52    3-60    106-158 (429)
274 3dxq_A Choline/ethanolamine ki  96.6  0.0092 3.1E-07   50.5   9.3   28  101-129   174-201 (301)
275 3f7w_A Putative fructosamine-3  96.5   0.023 7.9E-07   47.7  10.8   55    2-60     39-96  (288)
276 2qg7_A Ethanolamine kinase PV0  96.3   0.013 4.3E-07   53.0   8.3   54    3-61    134-188 (458)
277 1zyl_A Hypothetical protein YI  96.3   0.032 1.1E-06   47.5  10.6   27  101-129   196-222 (328)
278 3c5i_A Choline kinase; choline  96.1  0.0096 3.3E-07   52.0   6.7   28  101-129   213-240 (369)
279 3f2s_A CK, chetk-alpha, cholin  96.0  0.0096 3.3E-07   52.8   6.2   28  101-128   245-278 (401)
280 3mes_A Choline kinase; malaria  94.3     0.1 3.6E-06   46.5   7.3   28  101-129   263-290 (424)
281 2ppq_A HSK, HK, homoserine kin  91.8   0.068 2.3E-06   45.4   2.2   29  101-129   188-216 (322)
282 3i1a_A Spectinomycin phosphotr  88.5    0.41 1.4E-05   41.1   4.3   30  100-129   206-235 (339)
283 3g15_A CK, chetk-alpha, cholin  81.4    0.77 2.6E-05   40.4   2.7   28  102-129   246-279 (401)
284 4ano_A ESSB; membrane protein,  81.1     4.5 0.00015   32.3   6.8   82   32-127    48-130 (219)
285 4ann_A ESSB; membrane protein,  75.0     2.8 9.6E-05   33.4   3.9   83   32-127    43-125 (215)
286 3oja_A Leucine-rich immune mol  67.5    0.27 9.4E-06   44.5  -4.1   31   16-46    321-351 (487)
287 2x6h_A GH13170P, VPS34, phosph  49.1 1.8E+02   0.006   27.5  13.5   44   78-128   529-574 (696)
288 3ls8_A Phosphatidylinositol 3-  37.3 2.5E+02  0.0087   26.0  14.2   45   77-128   454-500 (614)
289 2fq3_A Transcription regulator  31.3      58   0.002   22.5   3.9   32  202-233    46-77  (104)
290 3bpy_A FORK head domain, forkh  30.3      54  0.0018   21.6   3.5   29  208-236    10-38  (85)
291 2y3a_A Phosphatidylinositol-4,  29.4      94  0.0032   31.0   6.4   40   82-128   922-963 (1092)
292 1e7u_A Phosphatidylinositol 3-  29.0      79  0.0027   31.1   5.8   41   81-128   785-827 (961)
293 3cxl_A N-chimerin; SH2, RHO-GA  28.1      10 0.00034   33.9  -0.6   38    8-45    176-215 (463)
294 3hhm_A Phosphatidylinositol-4,  26.6 1.2E+02  0.0042   30.2   6.6   59   60-128   899-960 (1091)
295 2wxf_A Phosphatidylinositol-4,  25.4      87   0.003   30.7   5.3   40   82-128   770-811 (940)
296 3l2c_A Forkhead box protein O4  24.7      72  0.0025   22.2   3.5   30  207-236    28-57  (110)
297 2hdc_A Protein (transcription   23.5      89   0.003   21.2   3.6   28  208-235     7-34  (97)
298 1vtn_C HNF-3/FORK head DNA-rec  23.1      86   0.003   21.4   3.6   29  208-236     8-36  (102)
299 2a07_F Forkhead box protein P2  22.3      90  0.0031   21.0   3.5   30  208-237     8-37  (93)
300 2hfh_A Genesis, HFH-2; HNF-3 h  22.3      88   0.003   21.7   3.5   29  208-236     8-36  (109)
301 3coa_C Forkhead box protein O1  22.3      89  0.0031   22.0   3.6   29  208-236    16-44  (117)
302 1kq8_A HFH-1, hepatocyte nucle  21.2      97  0.0033   21.1   3.5   30  207-236     6-35  (100)

No 1  
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=1.6e-56  Score=387.10  Aligned_cols=234  Identities=19%  Similarity=0.305  Sum_probs=197.2

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcC---------CCC
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQT---------DDQ   72 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---------~~~   72 (290)
                      |+.||||+++.......++|.+|+++|++|+|||||+++|+|.+.+.++||||||++|+|.++|....         ...
T Consensus        43 ~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~  122 (299)
T 4asz_A           43 KILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPP  122 (299)
T ss_dssp             CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CC
T ss_pred             CEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCC
Confidence            46799999988777788899999999999999999999999999999999999999999999997642         223


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCce-eeccceecccccCc
Q 044846           73 LPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH-LTTQVKVTFGYVDP  151 (290)
Q Consensus        73 ~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~g~~~y~aP  151 (290)
                      ..+++..++.++.||+.||.|||+++   ||||||||+|||++.++.+||+|||+|+........ ......||+.||||
T Consensus       123 ~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAP  199 (299)
T 4asz_A          123 TELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP  199 (299)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCH
Confidence            36999999999999999999999999   999999999999999999999999998754433222 23346789999999


Q ss_pred             cccccCCCCCcccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHhh---hhhhHHHHHHHHHHHHHhhccCCCCCCCHH
Q 044846          152 KYFRSSQFTEKSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYFS---KEAEKEEVITFAMVAKRCLNLNGKKQPTMK  227 (290)
Q Consensus       152 E~~~~~~~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~dp~~Rps~~  227 (290)
                      |++.+..|+.++|||||||++|||++ |.+||...... ........   ...+..++.++.+||.+||+.||++|||++
T Consensus       200 E~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~-~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~  278 (299)
T 4asz_A          200 ESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-EVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIK  278 (299)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHH
Confidence            99999999999999999999999998 78877543322 22222111   223445677899999999999999999999


Q ss_pred             HHHHHHHhhHhh
Q 044846          228 EVTLELAGIRAS  239 (290)
Q Consensus       228 el~~~l~~~~~~  239 (290)
                      ||...|+.+...
T Consensus       279 ~i~~~L~~~~~~  290 (299)
T 4asz_A          279 GIHTLLQNLAKA  290 (299)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhc
Confidence            999999988654


No 2  
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=7e-56  Score=388.08  Aligned_cols=234  Identities=21%  Similarity=0.346  Sum_probs=190.7

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCC----------
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDD----------   71 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~----------   71 (290)
                      |+.||||+++..+....++|.+|+++|++|+|||||+++|+|.+.+.+|||||||++|+|.++++.....          
T Consensus        71 ~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~  150 (329)
T 4aoj_A           71 KMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDV  150 (329)
T ss_dssp             CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC----------
T ss_pred             CeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccc
Confidence            4679999999877888889999999999999999999999999999999999999999999999764321          


Q ss_pred             -CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCC-ceeeccceeccccc
Q 044846           72 -QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDR-THLTTQVKVTFGYV  149 (290)
Q Consensus        72 -~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~g~~~y~  149 (290)
                       ..++++..++.++.||+.||.|||+++   ||||||||+|||++.++.+||+|||+++...... ........||+.||
T Consensus       151 ~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ym  227 (329)
T 4aoj_A          151 APGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM  227 (329)
T ss_dssp             -CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGC
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcEEEcccccceeccCCCcceecCccccccccc
Confidence             236899999999999999999999999   9999999999999999999999999987543322 22234567899999


Q ss_pred             CccccccCCCCCcccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHh---hhhhhHHHHHHHHHHHHHhhccCCCCCCC
Q 044846          150 DPKYFRSSQFTEKSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYF---SKEAEKEEVITFAMVAKRCLNLNGKKQPT  225 (290)
Q Consensus       150 aPE~~~~~~~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~dp~~Rps  225 (290)
                      |||++.+..|+.++|||||||++|||++ |..||...... ..+....   ....+..++.++.+||.+||+.||++|||
T Consensus       228 APE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs  306 (329)
T 4aoj_A          228 PPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-EAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHS  306 (329)
T ss_dssp             CHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH-HHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCC
T ss_pred             ChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcC
Confidence            9999999999999999999999999998 78877543322 1121111   12234456788999999999999999999


Q ss_pred             HHHHHHHHHhhHhh
Q 044846          226 MKEVTLELAGIRAS  239 (290)
Q Consensus       226 ~~el~~~l~~~~~~  239 (290)
                      +.||+++|+.+.+.
T Consensus       307 ~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          307 IKDVHARLQALAQA  320 (329)
T ss_dssp             HHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHhhC
Confidence            99999999988764


No 3  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=8.6e-56  Score=388.49  Aligned_cols=226  Identities=20%  Similarity=0.263  Sum_probs=190.8

Q ss_pred             CceEEEEeecc--cCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKS--VHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~--~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.||||+++.  ......+.+.+|+++|+.|+|||||+++++|.+.+.+|||||||+||+|.+++......  .+++..
T Consensus        49 ~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~--~~~e~~  126 (350)
T 4b9d_A           49 GRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGV--LFQEDQ  126 (350)
T ss_dssp             CCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTC--CCCHHH
T ss_pred             CCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCC--CCCHHH
Confidence            78899999864  34556788999999999999999999999999999999999999999999999765432  578999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCC
Q 044846           80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQF  159 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~  159 (290)
                      ++.++.||+.||.|||+++   ||||||||+|||++.+|.+||+|||+|+..... .....+..||+.|||||++.+..|
T Consensus       127 ~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-~~~~~~~~GT~~YmAPE~l~~~~y  202 (350)
T 4b9d_A          127 ILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-VELARACIGTPYYLSPEICENKPY  202 (350)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHH-HHHHHHHHSCCTTCCHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCC-cccccccCCCccccCHHHHCCCCC
Confidence            9999999999999999999   999999999999999999999999998754321 122345679999999999999999


Q ss_pred             CCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh---hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          160 TEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK---EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       160 ~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      +.++|||||||++|||++|.+||........ +......   ..+...+.++.+||.+||+.||++|||++|+++|-+
T Consensus       203 ~~~~DiwSlGvilyemltG~~PF~~~~~~~~-~~~i~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~  279 (350)
T 4b9d_A          203 NNKSDIWALGCVLYELCTLKHAFEAGSMKNL-VLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGF  279 (350)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHH
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH-HHHHHcCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHH
Confidence            9999999999999999999999975433221 2222111   223345678999999999999999999999998754


No 4  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=1.7e-55  Score=386.10  Aligned_cols=225  Identities=21%  Similarity=0.250  Sum_probs=192.1

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      |+.||||+++..+....+.+.+|+++|+.|+|||||+++++|.+.+.+|||||||+||+|.+++...     .+++..+.
T Consensus        99 g~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~-----~l~e~~~~  173 (346)
T 4fih_A           99 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT-----RMNEEQIA  173 (346)
T ss_dssp             CCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHHS-----CCCHHHHH
T ss_pred             CCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHcC-----CCCHHHHH
Confidence            7899999997666666778899999999999999999999999999999999999999999999763     48999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTE  161 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~  161 (290)
                      .++.||+.||.|||+++   ||||||||+|||++.+|.+||+|||+|+..... .....+..||+.|||||++.+..|+.
T Consensus       174 ~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-~~~~~~~~GTp~YmAPEvl~~~~y~~  249 (346)
T 4fih_A          174 AVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-VPRRKSLVGTPYWMAPELISRLPYGP  249 (346)
T ss_dssp             HHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSS-SCCBCCCCSCGGGCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCC-CCcccccccCcCcCCHHHHCCCCCCc
Confidence            99999999999999999   999999999999999999999999998754322 22345678999999999999999999


Q ss_pred             cccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh-----hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 044846          162 KSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS-----KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGI  236 (290)
Q Consensus       162 ~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~  236 (290)
                      ++|||||||++|||++|.+||........ +.....     .......+.++.+||.+||+.||++|||++|+++|-+-.
T Consensus       250 ~~DiWSlGvilyeml~G~~PF~~~~~~~~-~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~  328 (346)
T 4fih_A          250 EVDIWSLGIMVIEMVDGEPPYFNEPPLKA-MKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLA  328 (346)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGG
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCcCHHHH-HHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhc
Confidence            99999999999999999999875432221 111111     112234567899999999999999999999999886543


No 5  
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=9.3e-55  Score=376.56  Aligned_cols=231  Identities=22%  Similarity=0.280  Sum_probs=185.1

Q ss_pred             ceEEEEeeccc--CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            3 ELWLLKKSKSV--HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         3 ~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      ..||||+++..  ..+..+.|.+|+++|++|+|||||++++++.. +.++||||||+||+|.+++.....   ++++..+
T Consensus        59 ~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gGsL~~~l~~~~~---~l~~~~~  134 (307)
T 3omv_A           59 GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQET---KFQMFQL  134 (307)
T ss_dssp             SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSCBHHHHHHTSCC---CCCHHHH
T ss_pred             CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCCCHHHHHhhcCC---CCCHHHH
Confidence            45899998743  34567889999999999999999999998864 568999999999999999976543   5999999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccC-CceeeccceecccccCcccccc---
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAID-RTHLTTQVKVTFGYVDPKYFRS---  156 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~g~~~y~aPE~~~~---  156 (290)
                      ..++.||+.||.|||+++   ||||||||+|||++.++.+||+|||+|+..... .........||+.|||||++.+   
T Consensus       135 ~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~  211 (307)
T 3omv_A          135 IDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDN  211 (307)
T ss_dssp             HHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSS
T ss_pred             HHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCC
Confidence            999999999999999999   999999999999999999999999998754322 2223345689999999999864   


Q ss_pred             CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh-------hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHH
Q 044846          157 SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS-------KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV  229 (290)
Q Consensus       157 ~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el  229 (290)
                      ..|+.++|||||||++|||++|.+||...............       ...+..++..+.+||.+||+.||++|||+.||
T Consensus       212 ~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei  291 (307)
T 3omv_A          212 NPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQI  291 (307)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHH
T ss_pred             CCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHH
Confidence            35899999999999999999999998643322211111111       11223456789999999999999999999999


Q ss_pred             HHHHHhhHhhh
Q 044846          230 TLELAGIRASI  240 (290)
Q Consensus       230 ~~~l~~~~~~~  240 (290)
                      +.+|+.++..+
T Consensus       292 ~~~Le~l~~~l  302 (307)
T 3omv_A          292 LSSIELLQHSL  302 (307)
T ss_dssp             HHHHHHHHTTC
T ss_pred             HHHHHHHhccC
Confidence            99999887654


No 6  
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=5.1e-55  Score=379.27  Aligned_cols=231  Identities=18%  Similarity=0.272  Sum_probs=190.2

Q ss_pred             CceEEEEeeccc-CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCC---------
Q 044846            2 EELWLLKKSKSV-HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDD---------   71 (290)
Q Consensus         2 ~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~---------   71 (290)
                      ++.||||+++.. .....++|.+|+.+|++|+|||||+++|+|...+.++||||||++|+|.++|......         
T Consensus        56 ~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~  135 (308)
T 4gt4_A           56 TQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDD  135 (308)
T ss_dssp             CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----
T ss_pred             CeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccc
Confidence            467999999743 3445678999999999999999999999999999999999999999999999754211         


Q ss_pred             ---CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCC-ceeeccceeccc
Q 044846           72 ---QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDR-THLTTQVKVTFG  147 (290)
Q Consensus        72 ---~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~g~~~  147 (290)
                         ...+++..+..++.||+.||.|||+++   ||||||||+|||++.++.+||+|||+++...... ........||+.
T Consensus       136 ~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~  212 (308)
T 4gt4_A          136 RTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIR  212 (308)
T ss_dssp             CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGG
T ss_pred             cccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCc
Confidence               135899999999999999999999999   9999999999999999999999999987654322 223345678999


Q ss_pred             ccCccccccCCCCCcccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHhh---hhhhHHHHHHHHHHHHHhhccCCCCC
Q 044846          148 YVDPKYFRSSQFTEKSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYFS---KEAEKEEVITFAMVAKRCLNLNGKKQ  223 (290)
Q Consensus       148 y~aPE~~~~~~~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~dp~~R  223 (290)
                      |||||++.+..|+.++|||||||++|||++ |.+||...... ........   .+.+..++..+.+||.+||+.||++|
T Consensus       213 ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~-~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~R  291 (308)
T 4gt4_A          213 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-DVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRR  291 (308)
T ss_dssp             GCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             ccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHC
Confidence            999999999999999999999999999997 77777543222 21221111   22344567789999999999999999


Q ss_pred             CCHHHHHHHHHhh
Q 044846          224 PTMKEVTLELAGI  236 (290)
Q Consensus       224 ps~~el~~~l~~~  236 (290)
                      |||.||+++|+..
T Consensus       292 Ps~~ei~~~L~a~  304 (308)
T 4gt4_A          292 PRFKDIHSRLRAW  304 (308)
T ss_dssp             CCHHHHHHHHHTS
T ss_pred             cCHHHHHHHHHhc
Confidence            9999999999754


No 7  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=3.6e-54  Score=370.23  Aligned_cols=224  Identities=18%  Similarity=0.281  Sum_probs=184.0

Q ss_pred             CceEEEEeecc--cCchhHHHHHHHHHHHHhcCCCceeeEEeEEEe----CCcceEEEEeCCCCCHHHHHhhcCCCCCCC
Q 044846            2 EELWLLKKSKS--VHESNVEQFINEVVILSQINHRNVVKILGCCLE----TEVPLLVYEFIPNGSLYQYIHEQTDDQLPI   75 (290)
Q Consensus         2 ~~~~avK~~~~--~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~   75 (290)
                      |+.||+|++..  ......+.|.+|+++|++|+|||||+++++|..    .+.+|||||||+||+|.+++.+..    .+
T Consensus        51 ~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~----~l  126 (290)
T 3fpq_A           51 TVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK----VM  126 (290)
T ss_dssp             CCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHS----SC
T ss_pred             CeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcC----CC
Confidence            67899999853  345567789999999999999999999999975    346899999999999999998765    68


Q ss_pred             CHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEecc-CCcEEEeccccccccccCCceeeccceecccccCcccc
Q 044846           76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD-KYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYF  154 (290)
Q Consensus        76 ~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~  154 (290)
                      ++..+..++.||+.||.|||+++. +||||||||+|||++. ++.+||+|||+|+....   ....+..||+.|||||++
T Consensus       127 ~~~~~~~~~~qi~~aL~ylH~~~~-~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~---~~~~~~~GTp~YmAPE~~  202 (290)
T 3fpq_A          127 KIKVLRSWCRQILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA---SFAKAVIGTPEFMAPEMY  202 (290)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTSSS-CCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT---TSBEESCSSCCCCCGGGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCC-CEEecccChhheeEECCCCCEEEEeCcCCEeCCC---CccCCcccCccccCHHHc
Confidence            999999999999999999999864 3999999999999984 79999999999875332   233457899999999998


Q ss_pred             ccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh----hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHH
Q 044846          155 RSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK----EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVT  230 (290)
Q Consensus       155 ~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~  230 (290)
                      .+ .|+.++|||||||++|||++|.+||................    ..+...++++.+||.+||+.||++|||++|++
T Consensus       203 ~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l  281 (290)
T 3fpq_A          203 EE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL  281 (290)
T ss_dssp             GT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             CC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence            65 69999999999999999999999986433322222222111    12223456799999999999999999999999


Q ss_pred             HHHH
Q 044846          231 LELA  234 (290)
Q Consensus       231 ~~l~  234 (290)
                      +|.+
T Consensus       282 ~Hp~  285 (290)
T 3fpq_A          282 NHAF  285 (290)
T ss_dssp             TSGG
T ss_pred             cCcc
Confidence            8754


No 8  
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=2.1e-54  Score=377.97  Aligned_cols=226  Identities=17%  Similarity=0.120  Sum_probs=187.1

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      |+.||||+++....     ..+|+.+|+.|+|||||+++++|.+.+.+|||||||+||+|.++++...    .+++..+.
T Consensus        83 g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~----~l~e~~~~  153 (336)
T 4g3f_A           83 GFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG----CLPEDRAL  153 (336)
T ss_dssp             CCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHS----SCCHHHHH
T ss_pred             CCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHcC----CCCHHHHH
Confidence            78899999975322     2479999999999999999999999999999999999999999998765    69999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCC-cEEEeccccccccccCCce----eeccceecccccCcccccc
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY-QAKISDFRTFKSRAIDRTH----LTTQVKVTFGYVDPKYFRS  156 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~-~~kl~dfg~~~~~~~~~~~----~~~~~~g~~~y~aPE~~~~  156 (290)
                      .++.||+.||.|||+++   ||||||||+|||++.+| ++||+|||+|+........    ......||+.|||||++.+
T Consensus       154 ~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~  230 (336)
T 4g3f_A          154 YYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG  230 (336)
T ss_dssp             HHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTT
T ss_pred             HHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCC
Confidence            99999999999999999   99999999999999988 6999999998764432111    1234679999999999999


Q ss_pred             CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh-----hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 044846          157 SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS-----KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTL  231 (290)
Q Consensus       157 ~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~  231 (290)
                      ..|+.++|||||||++|||++|.+||........ ......     ...+...+..+.+||.+||+.||.+|||+.|+++
T Consensus       231 ~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~  309 (336)
T 4g3f_A          231 KPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-CLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRR  309 (336)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-HHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence            9999999999999999999999999864332211 111111     1123346678999999999999999999999999


Q ss_pred             HHHhhHhhh
Q 044846          232 ELAGIRASI  240 (290)
Q Consensus       232 ~l~~~~~~~  240 (290)
                      +|.......
T Consensus       310 ~l~~~l~~~  318 (336)
T 4g3f_A          310 KVGKALQEV  318 (336)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHhhh
Confidence            998876654


No 9  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=2.3e-54  Score=387.70  Aligned_cols=225  Identities=21%  Similarity=0.250  Sum_probs=192.3

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      |+.||||++...+....+.+.+|+.+|+.|+|||||+++++|.+.+.+|||||||+||+|.++++..     .+++..+.
T Consensus       176 g~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~~-----~l~e~~~~  250 (423)
T 4fie_A          176 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT-----RMNEEQIA  250 (423)
T ss_dssp             CCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHS-----CCCHHHHH
T ss_pred             CCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhcc-----CCCHHHHH
Confidence            7889999998766666778999999999999999999999999999999999999999999999754     48999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTE  161 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~  161 (290)
                      .++.||+.||.|||+++   ||||||||+|||++.+|.+||+|||+|+..... .....+..||+.|||||++.+..|+.
T Consensus       251 ~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~-~~~~~~~~GTp~YmAPEvl~~~~y~~  326 (423)
T 4fie_A          251 AVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-VPRRKSLVGTPYWMAPELISRLPYGP  326 (423)
T ss_dssp             HHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSS-CCCBCCCEECTTTCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCC-CccccccccCcCcCCHHHHCCCCCCc
Confidence            99999999999999999   999999999999999999999999998754322 22345678999999999999999999


Q ss_pred             cccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh-----hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 044846          162 KSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS-----KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGI  236 (290)
Q Consensus       162 ~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~  236 (290)
                      ++|||||||++|||++|.+||........ +.....     .......+.++.+||.+||+.||++|||+.|+++|-+-.
T Consensus       327 ~~DiWSlGvilyeml~G~~PF~~~~~~~~-~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~  405 (423)
T 4fie_A          327 EVDIWSLGIMVIEMVDGEPPYFNEPPLKA-MKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLA  405 (423)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGG
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCcCHHHH-HHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhc
Confidence            99999999999999999999865432221 111111     112234567899999999999999999999999886543


No 10 
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=1.6e-54  Score=374.63  Aligned_cols=223  Identities=21%  Similarity=0.261  Sum_probs=189.6

Q ss_pred             CceEEEEeecc---cCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKS---VHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~---~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|++..   .+....+.+.+|+++|+.|+|||||+++++|.+.+.+|||||||+||+|.+++.+..    .+++.
T Consensus        57 ~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~----~l~e~  132 (311)
T 4aw0_A           57 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDET  132 (311)
T ss_dssp             CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHS----SCCHH
T ss_pred             CCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcC----CCCHH
Confidence            78899999963   234557789999999999999999999999999999999999999999999998765    69999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccC-CceeeccceecccccCccccccC
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAID-RTHLTTQVKVTFGYVDPKYFRSS  157 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~g~~~y~aPE~~~~~  157 (290)
                      .++.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+|+..... ......+..||+.|||||++.+.
T Consensus       133 ~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~  209 (311)
T 4aw0_A          133 CTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK  209 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCC
Confidence            99999999999999999999   999999999999999999999999999865432 23344567899999999999999


Q ss_pred             CCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh--hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 044846          158 QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK--EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLE  232 (290)
Q Consensus       158 ~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~  232 (290)
                      .|+.++||||+||++|+|++|.+||....... ........  ..+...+.++.+||.+||+.||++|||++|++.+
T Consensus       210 ~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~-~~~~i~~~~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~  285 (311)
T 4aw0_A          210 SACKSSDLWALGCIIYQLVAGLPPFRAGNEGL-IFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY  285 (311)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCCCCCcccCHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence            99999999999999999999999997543321 11111111  2233456789999999999999999999997544


No 11 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=3.6e-53  Score=373.90  Aligned_cols=233  Identities=23%  Similarity=0.285  Sum_probs=190.8

Q ss_pred             ceEEEEeecccC-chhHHHHHHHHHHHHhcCC-CceeeEEeEEEeC-CcceEEEEeCCCCCHHHHHhhcCC---------
Q 044846            3 ELWLLKKSKSVH-ESNVEQFINEVVILSQINH-RNVVKILGCCLET-EVPLLVYEFIPNGSLYQYIHEQTD---------   70 (290)
Q Consensus         3 ~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~H-pniv~~~~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~---------   70 (290)
                      +.||||+++... ....+.|.+|+++|.+++| ||||+++|+|... +.++||||||++|+|.++|+....         
T Consensus        95 k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~  174 (353)
T 4ase_A           95 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP  174 (353)
T ss_dssp             EEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC----
T ss_pred             eEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccc
Confidence            579999997543 4456789999999999965 9999999999764 578999999999999999976432         


Q ss_pred             ---CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCc-eeeccceecc
Q 044846           71 ---DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT-HLTTQVKVTF  146 (290)
Q Consensus        71 ---~~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~g~~  146 (290)
                         ....+++..+..++.||+.||.|||+++   ||||||||+|||++.++.+||+|||+|+....... .......||+
T Consensus       175 ~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~  251 (353)
T 4ase_A          175 EDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL  251 (353)
T ss_dssp             ---CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECG
T ss_pred             hhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccc
Confidence               1235899999999999999999999999   99999999999999999999999999986543322 2345577899


Q ss_pred             cccCccccccCCCCCcccchhhHHHHHHHhc-CCCCcccchhhhh---hhHHHhhhhhhHHHHHHHHHHHHHhhccCCCC
Q 044846          147 GYVDPKYFRSSQFTEKSDVYSFSVVLVELNW-TKPIHLVDVEENR---SLAAYFSKEAEKEEVITFAMVAKRCLNLNGKK  222 (290)
Q Consensus       147 ~y~aPE~~~~~~~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  222 (290)
                      .|||||++.+..|+.++|||||||++|||++ |.+||........   .+........+..++.++.+||.+||+.||++
T Consensus       252 ~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~  331 (353)
T 4ase_A          252 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQ  331 (353)
T ss_dssp             GGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             cccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhH
Confidence            9999999999999999999999999999997 7887754322111   11111122334456778999999999999999


Q ss_pred             CCCHHHHHHHHHhhHh
Q 044846          223 QPTMKEVTLELAGIRA  238 (290)
Q Consensus       223 Rps~~el~~~l~~~~~  238 (290)
                      |||+.||+++|+.+.+
T Consensus       332 RPt~~eil~~L~~llq  347 (353)
T 4ase_A          332 RPTFSELVEHLGNLLQ  347 (353)
T ss_dssp             SCCHHHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHHHH
Confidence            9999999999988765


No 12 
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=9.2e-53  Score=358.65  Aligned_cols=223  Identities=17%  Similarity=0.186  Sum_probs=177.4

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|+++..   +....+.+.+|+++|+.++|||||++++++.+.+.+||||||| +|+|.+++....    .+++.
T Consensus        38 ~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g~L~~~l~~~~----~l~e~  112 (275)
T 3hyh_A           38 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRD----KMSEQ  112 (275)
T ss_dssp             CCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-CEEHHHHHHHSC----SCCHH
T ss_pred             CCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-CCCHHHHHHHcC----CCCHH
Confidence            788999998632   3344678999999999999999999999999999999999999 789999998754    69999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCC
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .+..++.||+.||.|||+++   |+||||||+|||++.++++||+|||+|+....  .....+..||+.|||||++.+..
T Consensus       113 ~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~--~~~~~~~~GT~~Y~APE~~~~~~  187 (275)
T 3hyh_A          113 EARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSCGSPNYAAPEVISGKL  187 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC-----------------CTTSCHHHHSSSS
T ss_pred             HHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCC--CCccCCeeECcccCChhhhcCCC
Confidence            99999999999999999999   99999999999999999999999999875332  22334578999999999999887


Q ss_pred             C-CCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh--hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 044846          159 F-TEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS--KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAG  235 (290)
Q Consensus       159 ~-~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~  235 (290)
                      | +.++||||+||++|+|++|.+||...... ........  ...+...+.++.+||.+||+.||++|||++|+++|-+-
T Consensus       188 y~~~~~DiwSlGvily~lltg~~PF~~~~~~-~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~  266 (275)
T 3hyh_A          188 YAGPEVDVWSCGVILYVMLCRRLPFDDESIP-VLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWF  266 (275)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHH
T ss_pred             CCCChhhhHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcCccc
Confidence            6 57999999999999999999998654322 11111111  11223456789999999999999999999999988653


No 13 
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=1.6e-53  Score=368.02  Aligned_cols=224  Identities=19%  Similarity=0.189  Sum_probs=180.0

Q ss_pred             CceEEEEeeccc--CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKSV--HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.||+|+++..  ......++.+|+++|++|+|||||+++++|.+.+.+|||||||+||+|.+++.+..    .+++..
T Consensus        52 ~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~----~l~e~~  127 (304)
T 3ubd_A           52 RQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV----MFTEED  127 (304)
T ss_dssp             TCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHHHC----CCCHHH
T ss_pred             CEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcC----CCCHHH
Confidence            578999998642  23334568899999999999999999999999999999999999999999998765    699999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCC
Q 044846           80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQF  159 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~  159 (290)
                      +..++.||+.||.|||+++   |+||||||+|||++.+|.+||+|||+|+..... .....+..||+.|||||++.+..|
T Consensus       128 ~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-~~~~~~~~GT~~YmAPE~~~~~~y  203 (304)
T 3ubd_A          128 VKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDH-EKKAYSFCGTVEYMAPEVVNRRGH  203 (304)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC------CCCCSCCCCGGGCCHHHHHTSCC
T ss_pred             HHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceeccCC-CccccccccCcccCCHHHhccCCC
Confidence            9999999999999999999   999999999999999999999999998753322 223345789999999999999999


Q ss_pred             CCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh--hhhhHHHHHHHHHHHHHhhccCCCCCCCH-----HHHHHH
Q 044846          160 TEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS--KEAEKEEVITFAMVAKRCLNLNGKKQPTM-----KEVTLE  232 (290)
Q Consensus       160 ~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rps~-----~el~~~  232 (290)
                      +.++||||+||++|||++|.+||....... .......  ...+...+.++.+||.+||+.||++|||+     +|+++|
T Consensus       204 ~~~~DiwSlGvilyemltG~~PF~~~~~~~-~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H  282 (304)
T 3ubd_A          204 TQSADWWSFGVLMFEMLTGTLPFQGKDRKE-TMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH  282 (304)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred             CCCCcccchHHHHHHHHhCCCCCCCcCHHH-HHHHHHcCCCCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence            999999999999999999999997543322 1221111  12233456789999999999999999985     677766


Q ss_pred             HH
Q 044846          233 LA  234 (290)
Q Consensus       233 l~  234 (290)
                      -+
T Consensus       283 p~  284 (304)
T 3ubd_A          283 SF  284 (304)
T ss_dssp             GG
T ss_pred             cc
Confidence            43


No 14 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=5.1e-52  Score=359.31  Aligned_cols=225  Identities=18%  Similarity=0.273  Sum_probs=173.0

Q ss_pred             CceEEEEeecccC-chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC------------cceEEEEeCCCCCHHHHHhhc
Q 044846            2 EELWLLKKSKSVH-ESNVEQFINEVVILSQINHRNVVKILGCCLETE------------VPLLVYEFIPNGSLYQYIHEQ   68 (290)
Q Consensus         2 ~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~------------~~~lv~e~~~~g~L~~~l~~~   68 (290)
                      |+.||||+++... ....+.+.+|+++|++|+|||||+++++|...+            .+|||||||++|+|.+++...
T Consensus        30 ~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~  109 (299)
T 4g31_A           30 DCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGR  109 (299)
T ss_dssp             CCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTC
T ss_pred             CCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhc
Confidence            7889999997543 445678999999999999999999999997654            369999999999999999865


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCc-----------e
Q 044846           69 TDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT-----------H  137 (290)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-----------~  137 (290)
                      ... ...++..++.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+|+.......           .
T Consensus       110 ~~~-~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~  185 (299)
T 4g31_A          110 CTI-EERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA  185 (299)
T ss_dssp             CSG-GGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCCCC--------------------
T ss_pred             CCC-ChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEccCccceecCCCcccccccccccccc
Confidence            421 13456778899999999999999999   99999999999999999999999999876433211           1


Q ss_pred             eeccceecccccCccccccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh---hhhhHHHHHHHHHHHHH
Q 044846          138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS---KEAEKEEVITFAMVAKR  214 (290)
Q Consensus       138 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~  214 (290)
                      ..++..||+.|||||++.+..|+.++|||||||++|||++   ||....+....+.....   .+.....++...+||.+
T Consensus       186 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~  262 (299)
T 4g31_A          186 RHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQD  262 (299)
T ss_dssp             ------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHH
T ss_pred             ccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHhcCCCCCCCcccCHHHHHHHHH
Confidence            1234679999999999999999999999999999999996   34333222222222211   12223445667899999


Q ss_pred             hhccCCCCCCCHHHHHHHH
Q 044846          215 CLNLNGKKQPTMKEVTLEL  233 (290)
Q Consensus       215 cl~~dp~~Rps~~el~~~l  233 (290)
                      ||+.||++|||+.|++++-
T Consensus       263 ~L~~dP~~Rps~~eil~h~  281 (299)
T 4g31_A          263 MLSPSPMERPEAINIIENA  281 (299)
T ss_dssp             HTCSSGGGSCCHHHHHTSG
T ss_pred             HcCCChhHCcCHHHHhcCH
Confidence            9999999999999998763


No 15 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=5.7e-52  Score=360.23  Aligned_cols=230  Identities=19%  Similarity=0.254  Sum_probs=175.3

Q ss_pred             CceEEEEeecccCchhHHHHHH--HHHHHHhcCCCceeeEEeEEEeCC----cceEEEEeCCCCCHHHHHhhcCCCCCCC
Q 044846            2 EELWLLKKSKSVHESNVEQFIN--EVVILSQINHRNVVKILGCCLETE----VPLLVYEFIPNGSLYQYIHEQTDDQLPI   75 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~--E~~~l~~l~Hpniv~~~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~   75 (290)
                      |+.||||+++...   .+.+..  |+..+..++|||||+++++|...+    .+|||||||++|+|.++++..     .+
T Consensus        26 g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~-----~l   97 (303)
T 3hmm_A           26 GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-----TV   97 (303)
T ss_dssp             TEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC-----CB
T ss_pred             CEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhC-----CC
Confidence            6789999997532   233344  555566789999999999998754    579999999999999999864     48


Q ss_pred             CHHHHHHHHHHHHHHHHHHhhCC-----CCCeEeccCCCCceEeccCCcEEEeccccccccccCCcee---eccceeccc
Q 044846           76 TWEMRLRITVEVSRVLSYLHSVA-----SIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL---TTQVKVTFG  147 (290)
Q Consensus        76 ~~~~~~~~~~~i~~~l~ylH~~~-----~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~g~~~  147 (290)
                      +++.+..++.|++.||+|||++.     .++||||||||+|||++.++++||+|||+++.........   .....||+.
T Consensus        98 ~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~  177 (303)
T 3hmm_A           98 TVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR  177 (303)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeeccccccccc
Confidence            99999999999999999999871     2239999999999999999999999999987654333222   234679999


Q ss_pred             ccCccccccC------CCCCcccchhhHHHHHHHhcCCCCcccchhh-------------hhhhHHHh-----h-----h
Q 044846          148 YVDPKYFRSS------QFTEKSDVYSFSVVLVELNWTKPIHLVDVEE-------------NRSLAAYF-----S-----K  198 (290)
Q Consensus       148 y~aPE~~~~~------~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~-------------~~~~~~~~-----~-----~  198 (290)
                      |||||++.+.      .++.++|||||||++|||++|.+++......             ........     .     .
T Consensus       178 ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~  257 (303)
T 3hmm_A          178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNR  257 (303)
T ss_dssp             GCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGG
T ss_pred             ccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCcc
Confidence            9999999764      3677999999999999999998765322110             01111110     0     0


Q ss_pred             hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhHhh
Q 044846          199 EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRAS  239 (290)
Q Consensus       199 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~~  239 (290)
                      .........+.+|+.+||+.||++||||.||++.|+.+...
T Consensus       258 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          258 WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             GGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             ccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence            11224556789999999999999999999999999988653


No 16 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.2e-49  Score=355.26  Aligned_cols=226  Identities=19%  Similarity=0.235  Sum_probs=181.4

Q ss_pred             CceEEEEeeccc--CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeC------CcceEEEEeCCCCCHHHHHhhcCCCCC
Q 044846            2 EELWLLKKSKSV--HESNVEQFINEVVILSQINHRNVVKILGCCLET------EVPLLVYEFIPNGSLYQYIHEQTDDQL   73 (290)
Q Consensus         2 ~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~------~~~~lv~e~~~~g~L~~~l~~~~~~~~   73 (290)
                      |+.||||+++..  .....+.+.+|+++|+.|+|||||++++++...      +.+||||||| +|+|.+++....    
T Consensus        79 ~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~-~g~L~~~i~~~~----  153 (398)
T 4b99_A           79 GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQ----  153 (398)
T ss_dssp             CCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECC-SEEHHHHHTSSS----
T ss_pred             CCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeCC-CCCHHHHHHhcC----
Confidence            789999999643  344567899999999999999999999998643      5679999999 478999998654    


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccC---CceeeccceecccccC
Q 044846           74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAID---RTHLTTQVKVTFGYVD  150 (290)
Q Consensus        74 ~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~g~~~y~a  150 (290)
                      ++++..+..++.||+.||.|||+++   ||||||||+|||++.++.+||+|||+++.....   ......+..||+.|+|
T Consensus       154 ~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~A  230 (398)
T 4b99_A          154 PLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA  230 (398)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcC
Confidence            6999999999999999999999999   999999999999999999999999998754322   1223456789999999


Q ss_pred             ccccccC-CCCCcccchhhHHHHHHHhcCCCCcccchhhhhh--hHHHhhh-----------------------------
Q 044846          151 PKYFRSS-QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRS--LAAYFSK-----------------------------  198 (290)
Q Consensus       151 PE~~~~~-~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~--~~~~~~~-----------------------------  198 (290)
                      ||++.+. .|+.++||||+||++|||++|.+||.........  +......                             
T Consensus       231 PEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (398)
T 4b99_A          231 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPW  310 (398)
T ss_dssp             HHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCH
T ss_pred             HHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCH
Confidence            9998875 4689999999999999999999998654322111  1000000                             


Q ss_pred             -hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 044846          199 -EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAG  235 (290)
Q Consensus       199 -~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~  235 (290)
                       ......+.++.+||.+||+.||++|||+.|+++|-+-
T Consensus       311 ~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f  348 (398)
T 4b99_A          311 ETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL  348 (398)
T ss_dssp             HHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGG
T ss_pred             HHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhh
Confidence             0001124678999999999999999999999988654


No 17 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=2.6e-48  Score=344.58  Aligned_cols=221  Identities=18%  Similarity=0.213  Sum_probs=176.4

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      ++.||+|++...  ....++.+|+++|+.+ +|||||+++++|.+.+++|||||||++|+|.+++.       .+++..+
T Consensus        49 ~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~-------~l~~~~~  119 (361)
T 4f9c_A           49 EEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN-------SLSFQEV  119 (361)
T ss_dssp             EEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHHT-------TCCHHHH
T ss_pred             CCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCcccHHHHHc-------CCCHHHH
Confidence            467999998653  3345688999999998 79999999999999999999999999999999984       4889999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccC-CcEEEeccccccccccCC------------------------
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDK-YQAKISDFRTFKSRAIDR------------------------  135 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~-~~~kl~dfg~~~~~~~~~------------------------  135 (290)
                      +.++.||+.||.|||+++   |+||||||+|||++.+ +.+||+|||+|+......                        
T Consensus       120 ~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (361)
T 4f9c_A          120 REYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSIC  196 (361)
T ss_dssp             HHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC-----------------
T ss_pred             HHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccccccccccccccccccccccccc
Confidence            999999999999999999   9999999999999876 799999999987432211                        


Q ss_pred             ---ceeeccceecccccCccccccC-CCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh-------------
Q 044846          136 ---THLTTQVKVTFGYVDPKYFRSS-QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK-------------  198 (290)
Q Consensus       136 ---~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~-------------  198 (290)
                         .....+..||+.|+|||++.+. .|+.++||||+||++|+|++|.+||....+....+......             
T Consensus       197 ~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~  276 (361)
T 4f9c_A          197 LSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTF  276 (361)
T ss_dssp             ---------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred             ccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhc
Confidence               1112345799999999999875 58999999999999999999998886543322211111000             


Q ss_pred             -------------------------------------------hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          199 -------------------------------------------EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       199 -------------------------------------------~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                                                                 ......+.++.+||.+||+.||++|||++|+++|.+
T Consensus       277 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~  355 (361)
T 4f9c_A          277 GKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPF  355 (361)
T ss_dssp             TEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGG
T ss_pred             cccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcc
Confidence                                                       000112456889999999999999999999998754


No 18 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=6.9e-48  Score=360.85  Aligned_cols=224  Identities=17%  Similarity=0.188  Sum_probs=190.9

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      |+.||+|+++.....+.+.+.+|+++|+.|+|||||+++++|.+.+.+|||||||.||+|.+++.....   .+++..+.
T Consensus       182 g~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~---~l~e~~~~  258 (573)
T 3uto_A          182 GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN---KMSEDEAV  258 (573)
T ss_dssp             CCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTS---CEEHHHHH
T ss_pred             CCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCC---CCCHHHHH
Confidence            788999999877777788899999999999999999999999999999999999999999999975432   58999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccC--CcEEEeccccccccccCCceeeccceecccccCccccccCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDK--YQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQF  159 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~--~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~  159 (290)
                      .++.||+.||.|||+++   |+||||||+|||++.+  +.+||+|||+++.....  .......||+.|||||++.+..|
T Consensus       259 ~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~--~~~~~~~GT~~y~APEv~~~~~y  333 (573)
T 3uto_A          259 EYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK--QSVKVTTGTAEFAAPEVAEGKPV  333 (573)
T ss_dssp             HHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT--SEEEEECSSGGGCCHHHHTTCCB
T ss_pred             HHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccCC--CceeeeEECccccCHHHhCCCCC
Confidence            99999999999999999   9999999999999854  89999999998764322  23345679999999999999999


Q ss_pred             CCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q 044846          160 TEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLEL  233 (290)
Q Consensus       160 ~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l  233 (290)
                      +.++||||+||++|+|++|.+||........ +.....      .......+.++.+||.+||+.||.+|||+.|+++|-
T Consensus       334 ~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hp  412 (573)
T 3uto_A          334 GYYTDMWSVGVLSYILLSGLSPFGGENDDET-LRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHP  412 (573)
T ss_dssp             CHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHST
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH-HHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence            9999999999999999999999875443221 111111      122234567899999999999999999999999885


Q ss_pred             H
Q 044846          234 A  234 (290)
Q Consensus       234 ~  234 (290)
                      +
T Consensus       413 w  413 (573)
T 3uto_A          413 W  413 (573)
T ss_dssp             T
T ss_pred             C
Confidence            4


No 19 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=1.9e-47  Score=357.96  Aligned_cols=223  Identities=14%  Similarity=0.122  Sum_probs=181.3

Q ss_pred             CceEEEEeeccc---CchhHHHHHHH---HHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCC
Q 044846            2 EELWLLKKSKSV---HESNVEQFINE---VVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPI   75 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E---~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~   75 (290)
                      |+.||||+++..   .......+.+|   +.+++.++|||||+++++|.+.+.+|||||||+||+|.+++....    .+
T Consensus       214 g~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~----~l  289 (689)
T 3v5w_A          214 GKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VF  289 (689)
T ss_dssp             CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHC----CC
T ss_pred             CCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHhcC----CC
Confidence            788999998531   12223334444   566677899999999999999999999999999999999998765    69


Q ss_pred             CHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccc
Q 044846           76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFR  155 (290)
Q Consensus        76 ~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~  155 (290)
                      ++..++.++.||+.||.|||+++   ||||||||+|||++.+|++||+|||+|+.....   ...+..||+.|||||++.
T Consensus       290 ~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~---~~~t~~GTp~YmAPEvl~  363 (689)
T 3v5w_A          290 SEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPHASVGTHGYMAPEVLQ  363 (689)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC---CCCSCCSCGGGCCHHHHS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeecCCC---CCCCccCCcCccCHHHHh
Confidence            99999999999999999999999   999999999999999999999999998754322   234578999999999996


Q ss_pred             c-CCCCCcccchhhHHHHHHHhcCCCCcccchhhh--hhhHHHh--hhhhhHHHHHHHHHHHHHhhccCCCCCCC-----
Q 044846          156 S-SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEEN--RSLAAYF--SKEAEKEEVITFAMVAKRCLNLNGKKQPT-----  225 (290)
Q Consensus       156 ~-~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~li~~cl~~dp~~Rps-----  225 (290)
                      . ..|+.++|+||+||++|||++|.+||.......  .......  ....+...+.++.+||.+||+.||.+|++     
T Consensus       364 ~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~g  443 (689)
T 3v5w_A          364 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRG  443 (689)
T ss_dssp             TTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSST
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCC
Confidence            4 579999999999999999999999996543211  1111111  11233446778999999999999999998     


Q ss_pred             HHHHHHHHH
Q 044846          226 MKEVTLELA  234 (290)
Q Consensus       226 ~~el~~~l~  234 (290)
                      ++||++|.+
T Consensus       444 a~ei~~Hpf  452 (689)
T 3v5w_A          444 AQEVKESPF  452 (689)
T ss_dssp             HHHHTTSGG
T ss_pred             HHHHhcCcc
Confidence            789988754


No 20 
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=1.8e-45  Score=320.24  Aligned_cols=235  Identities=21%  Similarity=0.373  Sum_probs=194.7

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      |+.||+|++...+....+.+.+|+++++.++||||+++++++...+..++||||+++|+|.+++.....   .+++..+.
T Consensus        35 ~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~  111 (310)
T 3s95_A           35 GEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDS---QYPWSQRV  111 (310)
T ss_dssp             CCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCT---TSCHHHHH
T ss_pred             CcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccC---CCCHHHHH
Confidence            678999999877788888999999999999999999999999999999999999999999999987433   58999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCcee-------------eccceecccc
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL-------------TTQVKVTFGY  148 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~-------------~~~~~g~~~y  148 (290)
                      .++.|++.||.|||+++   |+||||||+||+++.++.+||+|||+++.........             .....||+.|
T Consensus       112 ~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  188 (310)
T 3s95_A          112 SFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW  188 (310)
T ss_dssp             HHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC--------------------CCCCSCGGG
T ss_pred             HHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcce
Confidence            99999999999999999   9999999999999999999999999987543221111             1145689999


Q ss_pred             cCccccccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhh----hhHHHhhhhhhHHHHHHHHHHHHHhhccCCCCCC
Q 044846          149 VDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENR----SLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQP  224 (290)
Q Consensus       149 ~aPE~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  224 (290)
                      +|||++.+..++.++||||||+++|+|++|..++........    ..........+...+..+.+++.+||+.||++||
T Consensus       189 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp  268 (310)
T 3s95_A          189 MAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRP  268 (310)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTCCTTCCTTHHHHHHHHTCSSGGGSC
T ss_pred             eCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccCCCCCCHHHHHHHHHHccCChhhCc
Confidence            999999999999999999999999999999887754322111    1111111222334456799999999999999999


Q ss_pred             CHHHHHHHHHhhHhhhCc
Q 044846          225 TMKEVTLELAGIRASIGA  242 (290)
Q Consensus       225 s~~el~~~l~~~~~~~~~  242 (290)
                      |+.++++.|+.+......
T Consensus       269 s~~~l~~~L~~l~~~~~~  286 (310)
T 3s95_A          269 SFVKLEHWLETLRMHLAG  286 (310)
T ss_dssp             CHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhccC
Confidence            999999999999876543


No 21 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=5.7e-45  Score=315.56  Aligned_cols=224  Identities=21%  Similarity=0.268  Sum_probs=188.8

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      |+.||+|++........+.+.+|+.+++.++||||+++++++...+..++||||+.+|+|.+++...     .+++..+.
T Consensus        45 ~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~  119 (297)
T 3fxz_A           45 GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIA  119 (297)
T ss_dssp             CCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHS-----CCCHHHHH
T ss_pred             CcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhhc-----CCCHHHHH
Confidence            6789999997666666788999999999999999999999999999999999999999999999864     38899999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTE  161 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~  161 (290)
                      .++.|++.||.|||+++   |+||||||+|||++.++.+||+|||++....... .......||+.|+|||++.+..++.
T Consensus       120 ~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~  195 (297)
T 3fxz_A          120 AVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRSTMVGTPYWMAPEVVTRKAYGP  195 (297)
T ss_dssp             HHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTT-CCBCCCCSCGGGCCHHHHHCSCBCT
T ss_pred             HHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc-cccCCccCCcCccChhhhcCCCCCc
Confidence            99999999999999999   9999999999999999999999999976543322 2234467899999999999999999


Q ss_pred             cccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh----hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          162 KSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS----KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       162 ~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      ++|||||||++|+|++|..||...............    ...+...+..+.+||.+||+.||++|||+.|++++.+
T Consensus       196 ~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~  272 (297)
T 3fxz_A          196 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQF  272 (297)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGG
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChh
Confidence            999999999999999999988654332221111111    1123345667899999999999999999999998754


No 22 
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=1.6e-44  Score=315.85  Aligned_cols=234  Identities=34%  Similarity=0.550  Sum_probs=195.7

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      |+.||+|++........+.+.+|+++++.++||||+++++++...+..++||||+++|+|.+++.........+++..++
T Consensus        63 ~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  142 (321)
T 2qkw_B           63 GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL  142 (321)
T ss_dssp             CCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHH
T ss_pred             CCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHH
Confidence            67899999987777778899999999999999999999999999999999999999999999997665444468999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccC-CceeeccceecccccCccccccCCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAID-RTHLTTQVKVTFGYVDPKYFRSSQFT  160 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~g~~~y~aPE~~~~~~~~  160 (290)
                      .++.|++.||.|||+++   |+||||||+||+++.++.+||+|||+++..... .........||+.|+|||++.+..++
T Consensus       143 ~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  219 (321)
T 2qkw_B          143 EICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLT  219 (321)
T ss_dssp             HHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCC
T ss_pred             HHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCC
Confidence            99999999999999999   999999999999999999999999998653321 22223445689999999999988999


Q ss_pred             CcccchhhHHHHHHHhcCCCCcccchhhhh-hhHH-----------------HhhhhhhHHHHHHHHHHHHHhhccCCCC
Q 044846          161 EKSDVYSFSVVLVELNWTKPIHLVDVEENR-SLAA-----------------YFSKEAEKEEVITFAMVAKRCLNLNGKK  222 (290)
Q Consensus       161 ~~~DiwS~G~il~~l~~~~~~~~~~~~~~~-~~~~-----------------~~~~~~~~~~~~~~~~li~~cl~~dp~~  222 (290)
                      .++||||||+++|+|++|..|+........ ....                 ..........+..+.+++.+||+.||++
T Consensus       220 ~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~  299 (321)
T 2qkw_B          220 EKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSED  299 (321)
T ss_dssp             THHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGG
T ss_pred             cccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCccc
Confidence            999999999999999999988754321110 0000                 0011223567788999999999999999


Q ss_pred             CCCHHHHHHHHHhhHh
Q 044846          223 QPTMKEVTLELAGIRA  238 (290)
Q Consensus       223 Rps~~el~~~l~~~~~  238 (290)
                      |||+.|++++|+.+..
T Consensus       300 Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          300 RPSMGDVLWKLEYALR  315 (321)
T ss_dssp             SCCHHHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHHhh
Confidence            9999999999998865


No 23 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=6.1e-45  Score=321.87  Aligned_cols=227  Identities=18%  Similarity=0.240  Sum_probs=179.2

Q ss_pred             CceEEEEeecccC-chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            2 EELWLLKKSKSVH-ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         2 ~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      |+.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++|||||++|+|.+++....    .+++..+
T Consensus        35 ~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~----~l~~~~~  110 (347)
T 3zgw_A           35 GEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQD----RLSEEET  110 (347)
T ss_dssp             CCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS----SCCHHHH
T ss_pred             CCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCCCHHHHHHHcC----CCCHHHH
Confidence            6789999986433 3345678899999999999999999999999999999999999999999998765    5899999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCC-
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQF-  159 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-  159 (290)
                      +.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++...............||+.|+|||++.+..+ 
T Consensus       111 ~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  187 (347)
T 3zgw_A          111 RVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYL  187 (347)
T ss_dssp             HHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC--------------CGGGCCHHHHTTC---
T ss_pred             HHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCccccccCCccCccCHHHHcCCCCC
Confidence            999999999999999999   9999999999999999999999999976544333333455678999999999988775 


Q ss_pred             CCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh--hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 044846          160 TEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK--EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGI  236 (290)
Q Consensus       160 ~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~  236 (290)
                      +.++||||+||++|+|++|..||........ .......  ..+...+..+.+||.+||+.||.+|||+.|++++.+-.
T Consensus       188 ~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~-~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~~~  265 (347)
T 3zgw_A          188 GSEADVWSMGILLYVLMCGFLPFDDDNVMAL-YKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIM  265 (347)
T ss_dssp             CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHH
T ss_pred             CcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHcCCCCCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcCcchh
Confidence            8899999999999999999998865432211 1111111  12223456788999999999999999999999987654


No 24 
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=1.2e-44  Score=317.05  Aligned_cols=235  Identities=32%  Similarity=0.488  Sum_probs=191.5

Q ss_pred             CceEEEEeecccCc-hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            2 EELWLLKKSKSVHE-SNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         2 ~~~~avK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      |+.||+|+++.... .....+.+|+++++.++||||+++++++...+..++||||+.+|+|.+++.........+++..+
T Consensus        54 ~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  133 (326)
T 3uim_A           54 GTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR  133 (326)
T ss_dssp             SCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHH
T ss_pred             CCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHH
Confidence            67899999875332 22336889999999999999999999999999999999999999999999887655556999999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCCC
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFT  160 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~  160 (290)
                      ..++.|++.||.|||++...+|+||||||+|||++.++.+||+|||++...............||+.|+|||++.+..++
T Consensus       134 ~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  213 (326)
T 3uim_A          134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSS  213 (326)
T ss_dssp             HHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEEC
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCC
Confidence            99999999999999999111199999999999999999999999999876554444445556689999999999988899


Q ss_pred             CcccchhhHHHHHHHhcCCCCcccchhhh---hhhH-----------------HHhhhhhhHHHHHHHHHHHHHhhccCC
Q 044846          161 EKSDVYSFSVVLVELNWTKPIHLVDVEEN---RSLA-----------------AYFSKEAEKEEVITFAMVAKRCLNLNG  220 (290)
Q Consensus       161 ~~~DiwS~G~il~~l~~~~~~~~~~~~~~---~~~~-----------------~~~~~~~~~~~~~~~~~li~~cl~~dp  220 (290)
                      .++||||||+++|+|++|..||.......   ....                 ...........+..+.+++.+||+.||
T Consensus       214 ~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP  293 (326)
T 3uim_A          214 EKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSP  293 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCG
T ss_pred             ccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCC
Confidence            99999999999999999999885221100   0000                 001122345667889999999999999


Q ss_pred             CCCCCHHHHHHHHHhh
Q 044846          221 KKQPTMKEVTLELAGI  236 (290)
Q Consensus       221 ~~Rps~~el~~~l~~~  236 (290)
                      .+|||+.|++++|+..
T Consensus       294 ~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          294 MERPKMSEVVRMLEGD  309 (326)
T ss_dssp             GGSCCHHHHHHHHHTS
T ss_pred             ccCCCHHHHHHHhcCc
Confidence            9999999999999864


No 25 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=1.9e-44  Score=316.51  Aligned_cols=224  Identities=19%  Similarity=0.228  Sum_probs=187.2

Q ss_pred             CceEEEEeeccc--CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKSV--HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.||+|++...  +....+.+.+|+++++.++||||+++++++...+..|+||||+++|+|.+++....    .+++..
T Consensus        40 ~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~l~~~~  115 (328)
T 3fe3_A           40 GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG----RMKEKE  115 (328)
T ss_dssp             CCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHC----CCCHHH
T ss_pred             CCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHcC----CCCHHH
Confidence            678999998643  45567789999999999999999999999999999999999999999999998765    589999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCC
Q 044846           80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQF  159 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~  159 (290)
                      +..++.|++.||.|||+++   |+||||||+|||++.++.+||+|||++......  .......||+.|+|||++.+..+
T Consensus       116 ~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~  190 (328)
T 3fe3_A          116 ARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG--GKLDAFCGAPPYAAPELFQGKKY  190 (328)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS--CGGGTTSSSGGGCCHHHHHTCCC
T ss_pred             HHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCC--CccccccCCcceeCcccccCCCc
Confidence            9999999999999999999   999999999999999999999999998654322  23345678999999999998887


Q ss_pred             C-CcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh--hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 044846          160 T-EKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS--KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAG  235 (290)
Q Consensus       160 ~-~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~  235 (290)
                      . .++||||+||++|+|++|..||........ ......  ...+...+..+.+|+.+||+.||.+|||++|++++.+-
T Consensus       191 ~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~  268 (328)
T 3fe3_A          191 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL-RERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWI  268 (328)
T ss_dssp             CSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTT
T ss_pred             CCchhhhhhhHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhh
Confidence            5 689999999999999999998865432211 111111  11222346678999999999999999999999988553


No 26 
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=4e-44  Score=319.51  Aligned_cols=234  Identities=20%  Similarity=0.316  Sum_probs=189.6

Q ss_pred             ceEEEEeecccC-chhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCC---------
Q 044846            3 ELWLLKKSKSVH-ESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDD---------   71 (290)
Q Consensus         3 ~~~avK~~~~~~-~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~---------   71 (290)
                      ..||+|+++... ....+.+.+|+++++.+ +||||++++++|...+..|+||||+++|+|.+++......         
T Consensus       114 ~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~  193 (370)
T 2psq_A          114 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN  193 (370)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC---------
T ss_pred             eeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCcccccccccc
Confidence            469999997543 44567899999999999 8999999999999999999999999999999999875421         


Q ss_pred             ---CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCc-eeeccceeccc
Q 044846           72 ---QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT-HLTTQVKVTFG  147 (290)
Q Consensus        72 ---~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~g~~~  147 (290)
                         ...+++..++.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++....... .......+++.
T Consensus       194 ~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~  270 (370)
T 2psq_A          194 RVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK  270 (370)
T ss_dssp             --CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGG
T ss_pred             ccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccc
Confidence               124788999999999999999999999   99999999999999999999999999875432211 12233456788


Q ss_pred             ccCccccccCCCCCcccchhhHHHHHHHhc-CCCCcccchhhhhhhHHH---hhhhhhHHHHHHHHHHHHHhhccCCCCC
Q 044846          148 YVDPKYFRSSQFTEKSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAY---FSKEAEKEEVITFAMVAKRCLNLNGKKQ  223 (290)
Q Consensus       148 y~aPE~~~~~~~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~cl~~dp~~R  223 (290)
                      |+|||++.+..++.++|||||||++|||++ |..|+...... ......   .....+...+..+.++|.+||+.||.+|
T Consensus       271 y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R  349 (370)
T 2psq_A          271 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQR  349 (370)
T ss_dssp             GCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             eECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence            999999999999999999999999999998 77777543221 111111   1112233456689999999999999999


Q ss_pred             CCHHHHHHHHHhhHhhh
Q 044846          224 PTMKEVTLELAGIRASI  240 (290)
Q Consensus       224 ps~~el~~~l~~~~~~~  240 (290)
                      ||+.|++++|+.+....
T Consensus       350 pt~~ell~~L~~il~~~  366 (370)
T 2psq_A          350 PTFKQLVEDLDRILTLT  366 (370)
T ss_dssp             CCHHHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHh
Confidence            99999999999886543


No 27 
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=1.2e-44  Score=312.73  Aligned_cols=233  Identities=25%  Similarity=0.386  Sum_probs=187.1

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEe--CCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLE--TEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.||+|+++.......+.+.+|+++++.++||||+++++++..  ....++||||+++|+|.+++.....   .+++..
T Consensus        39 ~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~  115 (295)
T 3ugc_A           39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE---RIDHIK  115 (295)
T ss_dssp             CEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGG---GCCHHH
T ss_pred             CcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhccc---ccCHHH
Confidence            57899999988777778899999999999999999999999865  3568999999999999999987542   589999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCc--eeeccceecccccCccccccC
Q 044846           80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT--HLTTQVKVTFGYVDPKYFRSS  157 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~  157 (290)
                      ++.++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++........  .......++..|+|||++.+.
T Consensus       116 ~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  192 (295)
T 3ugc_A          116 LLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTES  192 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCC
Confidence            9999999999999999999   99999999999999999999999999875432221  122334567789999999999


Q ss_pred             CCCCcccchhhHHHHHHHhcCCCCcccchhhhhhh--------------HHHh----hhhhhHHHHHHHHHHHHHhhccC
Q 044846          158 QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSL--------------AAYF----SKEAEKEEVITFAMVAKRCLNLN  219 (290)
Q Consensus       158 ~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~--------------~~~~----~~~~~~~~~~~~~~li~~cl~~d  219 (290)
                      .++.++||||||+++|+|++|..++..........              ....    ....+...+..+.+||.+||+.|
T Consensus       193 ~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  272 (295)
T 3ugc_A          193 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNN  272 (295)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSS
T ss_pred             CCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCC
Confidence            99999999999999999999988765432211100              0000    01112334577999999999999


Q ss_pred             CCCCCCHHHHHHHHHhhHhhh
Q 044846          220 GKKQPTMKEVTLELAGIRASI  240 (290)
Q Consensus       220 p~~Rps~~el~~~l~~~~~~~  240 (290)
                      |++|||+.|+++.|+.+...+
T Consensus       273 p~~Rps~~el~~~L~~l~~~l  293 (295)
T 3ugc_A          273 VNQRPSFRDLALRVDQIRDNM  293 (295)
T ss_dssp             GGGSCCHHHHHHHHHHHHHC-
T ss_pred             hhhCCCHHHHHHHHHHHHHhc
Confidence            999999999999999987654


No 28 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=5.2e-44  Score=311.28  Aligned_cols=236  Identities=25%  Similarity=0.329  Sum_probs=183.5

Q ss_pred             CceEEEEeecccC--chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKSVH--ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.||+|++....  ....+.+.+|++++++++||||+++++++...+..++||||+++|+|.+++...... ..+++..
T Consensus        60 ~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~  138 (309)
T 3p86_A           60 GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAR-EQLDERR  138 (309)
T ss_dssp             TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHH-HHSCHHH
T ss_pred             CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCC-CCCCHHH
Confidence            6789999986543  445678999999999999999999999999999999999999999999999864311 1388999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCC
Q 044846           80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQF  159 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~  159 (290)
                      ++.++.|++.||.|||+++. +|+||||||+||+++.++.+||+|||+++..... ........||+.|+|||++.+..+
T Consensus       139 ~~~i~~qi~~aL~~LH~~~~-~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~  216 (309)
T 3p86_A          139 RLSMAYDVAKGMNYLHNRNP-PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST-FLSSKSAAGTPEWMAPEVLRDEPS  216 (309)
T ss_dssp             HHHHHHHHHHHHHHHHTSSS-CCCCTTCCGGGEEECTTCCEEECCCC------------------CCTTSCHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHHHcCCC-CEECCCCChhhEEEeCCCcEEECCCCCCcccccc-ccccccCCCCccccChhhhcCCCC
Confidence            99999999999999999863 3999999999999999999999999998643321 122334678999999999999999


Q ss_pred             CCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHH---hhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 044846          160 TEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAY---FSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGI  236 (290)
Q Consensus       160 ~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~  236 (290)
                      +.++|||||||++|+|++|..||.............   .....+...+..+.+||.+||+.||.+|||+.++++.|+.+
T Consensus       217 ~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~  296 (309)
T 3p86_A          217 NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL  296 (309)
T ss_dssp             CTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            999999999999999999999886443322211111   11122334567799999999999999999999999999988


Q ss_pred             Hhhh
Q 044846          237 RASI  240 (290)
Q Consensus       237 ~~~~  240 (290)
                      ....
T Consensus       297 ~~~~  300 (309)
T 3p86_A          297 IKSA  300 (309)
T ss_dssp             HC--
T ss_pred             HHhC
Confidence            7543


No 29 
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=9.3e-44  Score=311.43  Aligned_cols=228  Identities=18%  Similarity=0.268  Sum_probs=181.3

Q ss_pred             CceEEEEeeccc-CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC---------------------------------
Q 044846            2 EELWLLKKSKSV-HESNVEQFINEVVILSQINHRNVVKILGCCLETE---------------------------------   47 (290)
Q Consensus         2 ~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~---------------------------------   47 (290)
                      |+.||||+++.. .....+.+.+|+++++.++||||++++++|....                                 
T Consensus        31 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (332)
T 3qd2_B           31 DCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSV  110 (332)
T ss_dssp             CCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC-----------------------
T ss_pred             CcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCccccccc
Confidence            678999999743 3445778999999999999999999999986643                                 


Q ss_pred             ------------------------cceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeE
Q 044846           48 ------------------------VPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIY  103 (290)
Q Consensus        48 ------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~ii  103 (290)
                                              ..++|||||++|+|.+++...... ...++..++.++.||+.||.|||+++   |+
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---iv  186 (332)
T 3qd2_B          111 KIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL-EDREHGVCLHIFIQIAEAVEFLHSKG---LM  186 (332)
T ss_dssp             ---------------------CCCEEEEEEECCCSSCHHHHHHTCCSG-GGSCHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred             ceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc-cchhhHHHHHHHHHHHHHHHHHHhCC---ee
Confidence                                    279999999999999999875432 24567778999999999999999999   99


Q ss_pred             eccCCCCceEeccCCcEEEeccccccccccCCc-----------eeeccceecccccCccccccCCCCCcccchhhHHHH
Q 044846          104 HLDIKSANILLVDKYQAKISDFRTFKSRAIDRT-----------HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVL  172 (290)
Q Consensus       104 Hrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-----------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwS~G~il  172 (290)
                      ||||||+|||++.++.+||+|||+++.......           .......||+.|+|||++.+..++.++|||||||++
T Consensus       187 H~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il  266 (332)
T 3qd2_B          187 HRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLIL  266 (332)
T ss_dssp             CCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHH
T ss_pred             ecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHH
Confidence            999999999999999999999999875443211           122345689999999999999999999999999999


Q ss_pred             HHHhcCCCCcccchhhhhhhHHHhhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q 044846          173 VELNWTKPIHLVDVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLEL  233 (290)
Q Consensus       173 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l  233 (290)
                      |+|++|..++......................+..+.+||.+||+.||++|||+.|++++.
T Consensus       267 ~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~  327 (332)
T 3qd2_B          267 FELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENA  327 (332)
T ss_dssp             HHHHSCCCCHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHST
T ss_pred             HHHHHcCCChhHHHHHHHHhhccCCCcccccCChhHHHHHHHHccCCCCcCCCHHHHhhch
Confidence            9999988765432222221111111223344556789999999999999999999998763


No 30 
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=4.2e-44  Score=313.98  Aligned_cols=232  Identities=20%  Similarity=0.285  Sum_probs=187.7

Q ss_pred             ceEEEEeeccc-CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            3 ELWLLKKSKSV-HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         3 ~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      ..||||+++.. .....+.+.+|+.+++.++||||+++++++...+..++||||+++|+|.+++.....   .+++..++
T Consensus        78 ~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~  154 (325)
T 3kul_A           78 VPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG---QFTIMQLV  154 (325)
T ss_dssp             EEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTT---CSCHHHHH
T ss_pred             ceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhccc---CCCHHHHH
Confidence            35999999754 455577899999999999999999999999999999999999999999999976532   58999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCce--eeccceecccccCccccccCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH--LTTQVKVTFGYVDPKYFRSSQF  159 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~  159 (290)
                      .++.|++.||.|||+++   |+||||||+|||++.++.+||+|||+++........  ......+|+.|+|||++.+..+
T Consensus       155 ~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  231 (325)
T 3kul_A          155 GMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTF  231 (325)
T ss_dssp             HHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEE
T ss_pred             HHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCC
Confidence            99999999999999999   999999999999999999999999998754332211  2223445778999999998899


Q ss_pred             CCcccchhhHHHHHHHhc-CCCCcccchhhhhh--hHHHhhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 044846          160 TEKSDVYSFSVVLVELNW-TKPIHLVDVEENRS--LAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGI  236 (290)
Q Consensus       160 ~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~  236 (290)
                      +.++||||||+++|+|++ |..||.........  .........+...+..+.+||.+||+.||++|||+.++++.|+.+
T Consensus       232 ~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l  311 (325)
T 3kul_A          232 SSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL  311 (325)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            999999999999999998 88877543322111  111111222334567899999999999999999999999999988


Q ss_pred             Hhhh
Q 044846          237 RASI  240 (290)
Q Consensus       237 ~~~~  240 (290)
                      ....
T Consensus       312 ~~~~  315 (325)
T 3kul_A          312 IRSP  315 (325)
T ss_dssp             HHSC
T ss_pred             HhCc
Confidence            7643


No 31 
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=1.6e-43  Score=305.99  Aligned_cols=230  Identities=23%  Similarity=0.290  Sum_probs=185.3

Q ss_pred             CceEEEEeecc---cCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKS---VHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~---~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|++..   ......+.+.+|+.+++.++||||+++++++...+..++||||+++|+|.+++....    ++++.
T Consensus        36 ~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~----~~~~~  111 (294)
T 4eqm_A           36 NIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG----PLSVD  111 (294)
T ss_dssp             CSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHC----SCCHH
T ss_pred             CCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcC----CCCHH
Confidence            67899999853   334456789999999999999999999999999999999999999999999998765    58999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCC
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .++.++.|++.||.|||+++   |+||||||+||+++.++.+||+|||+++..............||+.|+|||++.+..
T Consensus       112 ~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  188 (294)
T 4eqm_A          112 TAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEA  188 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC-------------CCSSCCHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCC
Confidence            99999999999999999999   999999999999999999999999998754433333334567899999999999999


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh------hhhHHHHHHHHHHHHHhhccCCCCCC-CHHHHHH
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK------EAEKEEVITFAMVAKRCLNLNGKKQP-TMKEVTL  231 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~li~~cl~~dp~~Rp-s~~el~~  231 (290)
                      ++.++||||||+++|+|++|..||................      ......+..+.++|.+||+.||.+|| +++++.+
T Consensus       189 ~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~  268 (294)
T 4eqm_A          189 TDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKD  268 (294)
T ss_dssp             CCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHH
T ss_pred             CCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHH
Confidence            9999999999999999999999986544332222211111      11123456799999999999999998 7899998


Q ss_pred             HHHhhHh
Q 044846          232 ELAGIRA  238 (290)
Q Consensus       232 ~l~~~~~  238 (290)
                      .|+.+..
T Consensus       269 ~l~~~~~  275 (294)
T 4eqm_A          269 DLSSVLH  275 (294)
T ss_dssp             HHHTSSS
T ss_pred             HHHHHHh
Confidence            8887654


No 32 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=9.5e-44  Score=313.14  Aligned_cols=224  Identities=18%  Similarity=0.186  Sum_probs=187.6

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|+++..   .....+.+.+|+.+++.++||||+++++++...+..|+||||+++|+|..++....    .+++.
T Consensus        30 ~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~----~~~~~  105 (337)
T 1o6l_A           30 GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEE  105 (337)
T ss_dssp             CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS----CCCHH
T ss_pred             CCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcC----CCCHH
Confidence            678999998642   34457788999999999999999999999999999999999999999999998765    58999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCC
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .++.++.||+.||.|||+++   |+||||||+|||++.+|.+||+|||+++..... ........||+.|+|||++.+..
T Consensus       106 ~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~  181 (337)
T 1o6l_A          106 RARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GATMKTFCGTPEYLAPEVLEDND  181 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-TCCBCCCEECGGGCCGGGGSSSC
T ss_pred             HHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccC-CCcccccccChhhCChhhhcCCC
Confidence            99999999999999999999   999999999999999999999999998753222 22334567999999999999999


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh--hhhhHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS--KEAEKEEVITFAMVAKRCLNLNGKKQP-----TMKEVTL  231 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rp-----s~~el~~  231 (290)
                      ++.++|+|||||++|+|++|.+||........ ......  ...+...+.++.+||.+||+.||.+||     ++.|+++
T Consensus       182 ~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL-FELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             CCchhhcccchhHHHHHhcCCCCCCCCCHHHH-HHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence            99999999999999999999998865432211 111111  112234567899999999999999999     8999998


Q ss_pred             HHH
Q 044846          232 ELA  234 (290)
Q Consensus       232 ~l~  234 (290)
                      |.+
T Consensus       261 h~~  263 (337)
T 1o6l_A          261 HRF  263 (337)
T ss_dssp             SGG
T ss_pred             CCC
Confidence            854


No 33 
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=4.8e-44  Score=304.98  Aligned_cols=229  Identities=23%  Similarity=0.346  Sum_probs=188.3

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      ++.||+|+++.... ..+.+.+|++++++++||||+++++++...+..++||||+++|+|.+++.....   .+++..++
T Consensus        34 ~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~  109 (269)
T 4hcu_A           34 KDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG---LFAAETLL  109 (269)
T ss_dssp             TEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTT---CCCHHHHH
T ss_pred             CCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCc---ccCHHHHH
Confidence            45799999975433 346799999999999999999999999999999999999999999999976443   58999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTE  161 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~  161 (290)
                      .++.|++.||.|||+++   |+||||||+||+++.++.+||+|||+++..............+++.|+|||++.+..++.
T Consensus       110 ~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  186 (269)
T 4hcu_A          110 GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS  186 (269)
T ss_dssp             HHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCH
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEeccccccccccccccccccCcccccccCCHHHhcCCCCCc
Confidence            99999999999999999   999999999999999999999999998754332222333455677899999999999999


Q ss_pred             cccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHh---hhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhH
Q 044846          162 KSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYF---SKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIR  237 (290)
Q Consensus       162 ~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~  237 (290)
                      ++||||+|+++|+|++ |..|+........ .....   ....+...+..+.+++.+||+.||++|||+.+++++|+.+.
T Consensus       187 ~~Di~slG~~l~~ll~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~  265 (269)
T 4hcu_A          187 KSDVWSFGVLMWEVFSEGKIPYENRSNSEV-VEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA  265 (269)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-HHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHhcCCCCCCCCCCHHHH-HHHHhcCccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence            9999999999999998 7777754332211 11111   11222334667999999999999999999999999999886


Q ss_pred             h
Q 044846          238 A  238 (290)
Q Consensus       238 ~  238 (290)
                      .
T Consensus       266 ~  266 (269)
T 4hcu_A          266 E  266 (269)
T ss_dssp             H
T ss_pred             H
Confidence            5


No 34 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=1.4e-43  Score=313.77  Aligned_cols=228  Identities=17%  Similarity=0.164  Sum_probs=185.3

Q ss_pred             CceEEEEeeccc-----CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCC
Q 044846            2 EELWLLKKSKSV-----HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPIT   76 (290)
Q Consensus         2 ~~~~avK~~~~~-----~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~   76 (290)
                      |+.||+|+++..     .....+.+.+|+.+++.++||||+++++++...+..|+|||||++|+|.+++.........++
T Consensus        49 ~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~  128 (351)
T 3c0i_A           49 GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYS  128 (351)
T ss_dssp             CCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCC
T ss_pred             CCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCC
Confidence            678999998532     122467899999999999999999999999999999999999999999988876543333589


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCc---EEEeccccccccccCCceeeccceecccccCccc
Q 044846           77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ---AKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKY  153 (290)
Q Consensus        77 ~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~---~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~  153 (290)
                      +..+..++.||+.||.|||+++   |+||||||+|||++.++.   +||+|||++....... .......||+.|+|||+
T Consensus       129 ~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~  204 (351)
T 3c0i_A          129 EAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG-LVAGGRVGTPHFMAPEV  204 (351)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTS-CBCCCCCSCGGGCCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcceeEecCCC-eeecCCcCCcCccCHHH
Confidence            9999999999999999999999   999999999999986654   9999999986543221 22344678999999999


Q ss_pred             cccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------hhhhHHHHHHHHHHHHHhhccCCCCCCCHH
Q 044846          154 FRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------KEAEKEEVITFAMVAKRCLNLNGKKQPTMK  227 (290)
Q Consensus       154 ~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~  227 (290)
                      +.+..++.++|||||||++|+|++|.+||.......  ......      .......+..+.+||.+||+.||++|||+.
T Consensus       205 ~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~  282 (351)
T 3c0i_A          205 VKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERL--FEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVY  282 (351)
T ss_dssp             HTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHH--HHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHH--HHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHH
Confidence            999999999999999999999999999987543221  111111      111123456799999999999999999999


Q ss_pred             HHHHHHHh
Q 044846          228 EVTLELAG  235 (290)
Q Consensus       228 el~~~l~~  235 (290)
                      |++++.+-
T Consensus       283 e~l~hp~~  290 (351)
T 3c0i_A          283 EALNHPWL  290 (351)
T ss_dssp             HHHTSHHH
T ss_pred             HHhcChhh
Confidence            99987543


No 35 
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=2.6e-44  Score=321.47  Aligned_cols=231  Identities=19%  Similarity=0.296  Sum_probs=187.2

Q ss_pred             CceEEEEeeccc-CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            2 EELWLLKKSKSV-HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         2 ~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      |+.||||+++.. .....+.|.+|+++|+.++||||+++++++...+..++||||+++|+|.+++.....   .+++..+
T Consensus       139 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~  215 (377)
T 3cbl_A          139 NTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA---RLRVKTL  215 (377)
T ss_dssp             CCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGG---GCCHHHH
T ss_pred             CeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCC---CCCHHHH
Confidence            678999998753 334456789999999999999999999999999999999999999999999986542   5889999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceee-ccceecccccCccccccCCC
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLT-TQVKVTFGYVDPKYFRSSQF  159 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~g~~~y~aPE~~~~~~~  159 (290)
                      ..++.|++.||.|||+++   |+||||||+|||++.++.+||+|||+++.......... ....++..|+|||++.+..+
T Consensus       216 ~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  292 (377)
T 3cbl_A          216 LQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRY  292 (377)
T ss_dssp             HHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEE
T ss_pred             HHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCC
Confidence            999999999999999999   99999999999999999999999999865332211111 22345778999999998889


Q ss_pred             CCcccchhhHHHHHHHhc-CCCCcccchhhhhh--hHHHhhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 044846          160 TEKSDVYSFSVVLVELNW-TKPIHLVDVEENRS--LAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGI  236 (290)
Q Consensus       160 ~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~  236 (290)
                      +.++|||||||++|||++ |..|+.........  .........+..++..+.+||.+||+.||++|||+.++++.|+.+
T Consensus       293 ~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  372 (377)
T 3cbl_A          293 SSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI  372 (377)
T ss_dssp             EHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence            999999999999999997 77776543222111  111111122334566799999999999999999999999999988


Q ss_pred             Hh
Q 044846          237 RA  238 (290)
Q Consensus       237 ~~  238 (290)
                      ..
T Consensus       373 ~~  374 (377)
T 3cbl_A          373 RK  374 (377)
T ss_dssp             HH
T ss_pred             Hh
Confidence            65


No 36 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=1.7e-43  Score=314.35  Aligned_cols=224  Identities=21%  Similarity=0.232  Sum_probs=185.7

Q ss_pred             CceEEEEeecccCch------hHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCC
Q 044846            2 EELWLLKKSKSVHES------NVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPI   75 (290)
Q Consensus         2 ~~~~avK~~~~~~~~------~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~   75 (290)
                      |+.||+|+++.....      ..+.+.+|+.+|+.++||||+++++++...+..++||||+++|+|.+++....    .+
T Consensus        37 ~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----~l  112 (361)
T 2yab_A           37 GLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE----SL  112 (361)
T ss_dssp             CCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTCS----CC
T ss_pred             CCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhcC----CC
Confidence            678999998643321      35789999999999999999999999999999999999999999999997644    58


Q ss_pred             CHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCC----cEEEeccccccccccCCceeeccceecccccCc
Q 044846           76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY----QAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDP  151 (290)
Q Consensus        76 ~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~----~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aP  151 (290)
                      ++..+..++.||+.||.|||+++   |+||||||+|||++.++    .+||+|||+++.....  .......||+.|+||
T Consensus       113 ~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~--~~~~~~~gt~~y~aP  187 (361)
T 2yab_A          113 SEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG--VEFKNIFGTPEFVAP  187 (361)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTT--CCCCCCCSCGGGCCH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCC--CccccCCCCccEECc
Confidence            99999999999999999999999   99999999999998777    7999999998654322  223446789999999


Q ss_pred             cccccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------hhhhHHHHHHHHHHHHHhhccCCCCCCC
Q 044846          152 KYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------KEAEKEEVITFAMVAKRCLNLNGKKQPT  225 (290)
Q Consensus       152 E~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~Rps  225 (290)
                      |++.+..++.++|||||||++|+|++|.+||........ ......      .......+..+.+||.+||..||.+|||
T Consensus       188 E~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t  266 (361)
T 2yab_A          188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-LANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLT  266 (361)
T ss_dssp             HHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             hHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcC
Confidence            999998999999999999999999999999865433211 111111      1112234567999999999999999999


Q ss_pred             HHHHHHHHHh
Q 044846          226 MKEVTLELAG  235 (290)
Q Consensus       226 ~~el~~~l~~  235 (290)
                      +.|+++|.+-
T Consensus       267 ~~e~l~hp~~  276 (361)
T 2yab_A          267 IQEALRHPWI  276 (361)
T ss_dssp             HHHHHTSTTT
T ss_pred             HHHHhcCcCc
Confidence            9999987543


No 37 
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=8.6e-44  Score=315.49  Aligned_cols=235  Identities=22%  Similarity=0.280  Sum_probs=189.0

Q ss_pred             CceEEEEeeccc-CchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCC-cceEEEEeCCCCCHHHHHhhcCCC-------
Q 044846            2 EELWLLKKSKSV-HESNVEQFINEVVILSQI-NHRNVVKILGCCLETE-VPLLVYEFIPNGSLYQYIHEQTDD-------   71 (290)
Q Consensus         2 ~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~-------   71 (290)
                      |+.||||+++.. .....+.+.+|++++..+ +||||+++++++...+ ..++|||||++|+|.+++......       
T Consensus        52 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~  131 (359)
T 3vhe_A           52 CRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTK  131 (359)
T ss_dssp             EEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--
T ss_pred             ceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccc
Confidence            367999999753 344567899999999999 8999999999998755 489999999999999999875421       


Q ss_pred             -------------------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHhh
Q 044846           72 -------------------------------------------------------QLPITWEMRLRITVEVSRVLSYLHS   96 (290)
Q Consensus        72 -------------------------------------------------------~~~~~~~~~~~~~~~i~~~l~ylH~   96 (290)
                                                                             ...+++..++.++.||+.||.|||+
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~  211 (359)
T 3vhe_A          132 GARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS  211 (359)
T ss_dssp             ----------------------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH
Confidence                                                                   1128899999999999999999999


Q ss_pred             CCCCCeEeccCCCCceEeccCCcEEEeccccccccccCC-ceeeccceecccccCccccccCCCCCcccchhhHHHHHHH
Q 044846           97 VASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDR-THLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVEL  175 (290)
Q Consensus        97 ~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwS~G~il~~l  175 (290)
                      ++   |+||||||+|||++.++.+||+|||+++...... ........||+.|+|||++.+..++.++|||||||++|+|
T Consensus       212 ~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el  288 (359)
T 3vhe_A          212 RK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI  288 (359)
T ss_dssp             TT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             CC---cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHH
Confidence            99   9999999999999999999999999987543222 2233456788999999999999999999999999999999


Q ss_pred             hc-CCCCcccchhhhhhhHHH---hhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhHhh
Q 044846          176 NW-TKPIHLVDVEENRSLAAY---FSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRAS  239 (290)
Q Consensus       176 ~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~~  239 (290)
                      ++ |..|+.............   .....+...+..+.+++.+||+.||.+|||+.|++++|+.+..+
T Consensus       289 lt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  356 (359)
T 3vhe_A          289 FSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  356 (359)
T ss_dssp             TTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence            98 888875433221111111   11122334566799999999999999999999999999988754


No 38 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=1.9e-43  Score=309.27  Aligned_cols=226  Identities=21%  Similarity=0.257  Sum_probs=189.7

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      |+.||||+++.......+.+.+|+.+++.++||||+++++++...+..++||||+++|+|.+++...     .+++..+.
T Consensus        70 g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~l~~~~~~  144 (321)
T 2c30_A           70 GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-----RLNEEQIA  144 (321)
T ss_dssp             CCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC-----CCCHHHHH
T ss_pred             CcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc-----CCCHHHHH
Confidence            7889999998777777888999999999999999999999999999999999999999999998753     48999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTE  161 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~  161 (290)
                      .++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++....... .......||+.|+|||++.+..++.
T Consensus       145 ~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~  220 (321)
T 2c30_A          145 TVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRKSLVGTPYWMAPEVISRSLYAT  220 (321)
T ss_dssp             HHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-CCBCCCCSCGGGCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCcEEEeeeeeeeecccCc-cccccccCCccccCHhhhcCCCCCc
Confidence            99999999999999999   9999999999999999999999999976543221 2234467899999999999999999


Q ss_pred             cccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh-----hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 044846          162 KSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK-----EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGI  236 (290)
Q Consensus       162 ~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~  236 (290)
                      ++||||||+++|+|++|..|+........ .......     ......+..+.+++.+||+.||++|||+.|++++.+..
T Consensus       221 ~~Dv~slG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~  299 (321)
T 2c30_A          221 EVDIWSLGIMVIEMVDGEPPYFSDSPVQA-MKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLL  299 (321)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGG
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhc
Confidence            99999999999999999998865432211 1111110     11223456789999999999999999999999887654


Q ss_pred             H
Q 044846          237 R  237 (290)
Q Consensus       237 ~  237 (290)
                      .
T Consensus       300 ~  300 (321)
T 2c30_A          300 Q  300 (321)
T ss_dssp             G
T ss_pred             c
Confidence            3


No 39 
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.8e-43  Score=316.60  Aligned_cols=235  Identities=21%  Similarity=0.311  Sum_probs=191.7

Q ss_pred             ceEEEEeeccc-CchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCC---------
Q 044846            3 ELWLLKKSKSV-HESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDD---------   71 (290)
Q Consensus         3 ~~~avK~~~~~-~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~---------   71 (290)
                      ..||+|+++.. .....+.+.+|+++++.+ +||||+++++++...+..++||||+++|+|.+++......         
T Consensus       102 ~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~  181 (382)
T 3tt0_A          102 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS  181 (382)
T ss_dssp             EEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCC
T ss_pred             eEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccc
Confidence            46999999753 345567899999999999 9999999999999999999999999999999999875421         


Q ss_pred             ---CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCc-eeeccceeccc
Q 044846           72 ---QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT-HLTTQVKVTFG  147 (290)
Q Consensus        72 ---~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~g~~~  147 (290)
                         ...+++..++.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++....... .......+|+.
T Consensus       182 ~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~  258 (382)
T 3tt0_A          182 HNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK  258 (382)
T ss_dssp             SSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGG
T ss_pred             cccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcc
Confidence               125899999999999999999999999   99999999999999999999999999875432221 22334567889


Q ss_pred             ccCccccccCCCCCcccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHh---hhhhhHHHHHHHHHHHHHhhccCCCCC
Q 044846          148 YVDPKYFRSSQFTEKSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYF---SKEAEKEEVITFAMVAKRCLNLNGKKQ  223 (290)
Q Consensus       148 y~aPE~~~~~~~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~dp~~R  223 (290)
                      |+|||++.+..++.++|||||||++|+|++ |..|+...... .......   ....+...+..+.+|+.+||+.||++|
T Consensus       259 y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R  337 (382)
T 3tt0_A          259 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE-ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQR  337 (382)
T ss_dssp             GSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-HHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGS
T ss_pred             eeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhC
Confidence            999999999999999999999999999998 87777543221 1111111   112223456779999999999999999


Q ss_pred             CCHHHHHHHHHhhHhhhC
Q 044846          224 PTMKEVTLELAGIRASIG  241 (290)
Q Consensus       224 ps~~el~~~l~~~~~~~~  241 (290)
                      ||+.|++++|+.+.....
T Consensus       338 ps~~ell~~L~~~~~~~~  355 (382)
T 3tt0_A          338 PTFKQLVEDLDRIVALTS  355 (382)
T ss_dssp             CCHHHHHHHHHHHHHHSC
T ss_pred             cCHHHHHHHHHHHHHHHh
Confidence            999999999999976553


No 40 
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=1.3e-43  Score=302.02  Aligned_cols=230  Identities=20%  Similarity=0.273  Sum_probs=188.8

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      ++.||+|+++.... ..+.+.+|+++++.++||||+++++++...+..++||||+++|+|.+++.....   .+++..++
T Consensus        32 ~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~  107 (268)
T 3sxs_A           32 QYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGK---GLEPSQLL  107 (268)
T ss_dssp             TEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGG---GCCHHHHH
T ss_pred             ceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCC---CCCHHHHH
Confidence            35699999976443 356789999999999999999999999999999999999999999999987542   58999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTE  161 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~  161 (290)
                      .++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++...............+++.|+|||++.+..++.
T Consensus       108 ~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  184 (268)
T 3sxs_A          108 EMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSS  184 (268)
T ss_dssp             HHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEET
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCch
Confidence            99999999999999999   999999999999999999999999998755443333334455677899999999888999


Q ss_pred             cccchhhHHHHHHHhc-CCCCcccchhhhhhhHHH--hhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhHh
Q 044846          162 KSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAY--FSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRA  238 (290)
Q Consensus       162 ~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~  238 (290)
                      ++||||||+++|+|++ |..|+.............  .....+...+..+.+++.+||+.||.+|||+.+++++|+.+..
T Consensus       185 ~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (268)
T 3sxs_A          185 KSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE  264 (268)
T ss_dssp             THHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred             hhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence            9999999999999998 887775433222111111  1111222345679999999999999999999999999998754


No 41 
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=7.2e-44  Score=317.55  Aligned_cols=235  Identities=20%  Similarity=0.248  Sum_probs=189.5

Q ss_pred             CceEEEEeeccc-CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCC---CCCCCCH
Q 044846            2 EELWLLKKSKSV-HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD---DQLPITW   77 (290)
Q Consensus         2 ~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~   77 (290)
                      ++.||||+++.. .......+.+|+.+++.++||||+++++++......++|||||++|+|.+++.....   ....+++
T Consensus       101 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~  180 (367)
T 3l9p_A          101 PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM  180 (367)
T ss_dssp             CEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCH
T ss_pred             ceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccH
Confidence            457999998643 455566899999999999999999999999999999999999999999999987642   2235889


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCC---cEEEeccccccccccC-CceeeccceecccccCccc
Q 044846           78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY---QAKISDFRTFKSRAID-RTHLTTQVKVTFGYVDPKY  153 (290)
Q Consensus        78 ~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~---~~kl~dfg~~~~~~~~-~~~~~~~~~g~~~y~aPE~  153 (290)
                      ..++.++.||+.||.|||+++   |+||||||+|||++.++   .+||+|||+++..... .........+|+.|+|||+
T Consensus       181 ~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~  257 (367)
T 3l9p_A          181 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEA  257 (367)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHH
Confidence            999999999999999999999   99999999999999555   5999999998643211 1122234567889999999


Q ss_pred             cccCCCCCcccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHhh---hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHH
Q 044846          154 FRSSQFTEKSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYFS---KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV  229 (290)
Q Consensus       154 ~~~~~~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el  229 (290)
                      +.+..++.++|||||||++|+|++ |.+||...... ........   ...+...+..+.+|+.+||+.||.+|||+.++
T Consensus       258 ~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ei  336 (367)
T 3l9p_A          258 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII  336 (367)
T ss_dssp             HHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             hcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHH
Confidence            999999999999999999999997 87777543322 11111111   12233456679999999999999999999999


Q ss_pred             HHHHHhhHhhh
Q 044846          230 TLELAGIRASI  240 (290)
Q Consensus       230 ~~~l~~~~~~~  240 (290)
                      +++|+.+....
T Consensus       337 l~~l~~~~~~~  347 (367)
T 3l9p_A          337 LERIEYCTQDP  347 (367)
T ss_dssp             HHHHHHHHHCH
T ss_pred             HHHHHHHhhCh
Confidence            99999887643


No 42 
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=3.7e-44  Score=308.56  Aligned_cols=226  Identities=20%  Similarity=0.351  Sum_probs=185.8

Q ss_pred             ceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHHH
Q 044846            3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLR   82 (290)
Q Consensus         3 ~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~   82 (290)
                      ..||+|+++.......+.+.+|+++++.++||||+++++++...+..++||||+++|+|.+++.....   .+++..++.
T Consensus        41 ~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~  117 (289)
T 4fvq_A           41 TEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKN---CINILWKLE  117 (289)
T ss_dssp             EEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGG---GCCHHHHHH
T ss_pred             hhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCC---CCCHHHHHH
Confidence            46999999877777788999999999999999999999999999999999999999999999987542   488999999


Q ss_pred             HHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCc--------EEEeccccccccccCCceeeccceecccccCcccc
Q 044846           83 ITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ--------AKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYF  154 (290)
Q Consensus        83 ~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~--------~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~  154 (290)
                      ++.||+.||.|||+++   |+||||||+|||++.++.        +||+|||++.....     .....+++.|+|||++
T Consensus       118 i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~-----~~~~~~~~~y~aPE~~  189 (289)
T 4fvq_A          118 VAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP-----KDILQERIPWVPPECI  189 (289)
T ss_dssp             HHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSC-----HHHHHHTTTTSCHHHH
T ss_pred             HHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeeeccCcccccccC-----ccccCCcCcccCHHHh
Confidence            9999999999999999   999999999999998887        99999999754321     1234578899999999


Q ss_pred             cc-CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHh-hhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 044846          155 RS-SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYF-SKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLE  232 (290)
Q Consensus       155 ~~-~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~  232 (290)
                      .+ ..++.++||||||+++|+|++|..++.............. ....+...+..+.+|+.+||+.||++|||+.+++++
T Consensus       190 ~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          190 ENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             HCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            87 6789999999999999999996655554433222221111 111122235568899999999999999999999999


Q ss_pred             HHhhHhh
Q 044846          233 LAGIRAS  239 (290)
Q Consensus       233 l~~~~~~  239 (290)
                      |+.+...
T Consensus       270 l~~l~~p  276 (289)
T 4fvq_A          270 LNSLFTP  276 (289)
T ss_dssp             HHTCC--
T ss_pred             HHHhcCC
Confidence            9988543


No 43 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=2.6e-44  Score=315.07  Aligned_cols=227  Identities=23%  Similarity=0.259  Sum_probs=183.2

Q ss_pred             CceEEEEeecccC-chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            2 EELWLLKKSKSVH-ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         2 ~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      |+.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..++|||||++|+|.+++....    .+++..+
T Consensus        32 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~  107 (323)
T 3tki_A           32 EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDA  107 (323)
T ss_dssp             CCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBTTT----BCCHHHH
T ss_pred             CcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhcC----CCCHHHH
Confidence            6789999986433 2334678899999999999999999999999999999999999999999987554    5899999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCC-ceeeccceecccccCccccccCCC
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDR-THLTTQVKVTFGYVDPKYFRSSQF  159 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~  159 (290)
                      +.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++...... ........||+.|+|||++.+..+
T Consensus       108 ~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  184 (323)
T 3tki_A          108 QRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF  184 (323)
T ss_dssp             HHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSB
T ss_pred             HHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCC
Confidence            999999999999999999   9999999999999999999999999986543222 122345678999999999988775


Q ss_pred             -CCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh----hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          160 -TEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS----KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       160 -~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                       +.++|||||||++|+|++|..||...............    .......+..+.+||.+||+.||++|||+.|++++.+
T Consensus       185 ~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~  264 (323)
T 3tki_A          185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRW  264 (323)
T ss_dssp             CHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTT
T ss_pred             CCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChh
Confidence             67899999999999999999988654332222222111    1112345667889999999999999999999998765


Q ss_pred             h
Q 044846          235 G  235 (290)
Q Consensus       235 ~  235 (290)
                      .
T Consensus       265 ~  265 (323)
T 3tki_A          265 Y  265 (323)
T ss_dssp             T
T ss_pred             h
Confidence            4


No 44 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=3.1e-43  Score=315.63  Aligned_cols=228  Identities=18%  Similarity=0.192  Sum_probs=181.8

Q ss_pred             CceEEEEeeccc--CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKSV--HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.||||+++..  .....+.+.+|+.+++.++|||||++++++...+..++|||||++|+|.+++......  .+++..
T Consensus        52 ~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~  129 (389)
T 3gni_B           52 GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMD--GMNELA  129 (389)
T ss_dssp             CCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTT--CCCHHH
T ss_pred             CCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhccc--CCCHHH
Confidence            678999998643  3455678889999999999999999999999999999999999999999999875332  589999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCc------eeeccceecccccCccc
Q 044846           80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT------HLTTQVKVTFGYVDPKY  153 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~------~~~~~~~g~~~y~aPE~  153 (290)
                      +..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||.+........      .......||..|+|||+
T Consensus       130 ~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  206 (389)
T 3gni_B          130 IAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEV  206 (389)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHH
T ss_pred             HHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHH
Confidence            9999999999999999999   99999999999999999999999998754321111      11123467889999999


Q ss_pred             ccc--CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHh-----------------------------------
Q 044846          154 FRS--SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYF-----------------------------------  196 (290)
Q Consensus       154 ~~~--~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~-----------------------------------  196 (290)
                      +.+  ..++.++|||||||++|+|++|.+||..............                                   
T Consensus       207 ~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (389)
T 3gni_B          207 LQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLT  286 (389)
T ss_dssp             HSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-------------------------------------
T ss_pred             HhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccc
Confidence            987  5789999999999999999999998864322111110000                                   


Q ss_pred             ------------hhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          197 ------------SKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       197 ------------~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                                  ........+..+.+||.+||+.||++|||+.|++++.+
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~  336 (389)
T 3gni_B          287 TSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSF  336 (389)
T ss_dssp             -------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGG
T ss_pred             cCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHH
Confidence                        00011223456899999999999999999999998843


No 45 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=4.4e-43  Score=307.58  Aligned_cols=224  Identities=23%  Similarity=0.263  Sum_probs=185.2

Q ss_pred             CceEEEEeecccCc------hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCC
Q 044846            2 EELWLLKKSKSVHE------SNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPI   75 (290)
Q Consensus         2 ~~~~avK~~~~~~~------~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~   75 (290)
                      |+.||+|+++....      ...+.+.+|+.+++.++||||+++++++...+..++||||+++|+|.+++....    .+
T Consensus        36 ~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~  111 (326)
T 2y0a_A           36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE----SL  111 (326)
T ss_dssp             CCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTSS----CC
T ss_pred             CcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhcC----Cc
Confidence            67899999864332      146789999999999999999999999999999999999999999999997644    58


Q ss_pred             CHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCC----cEEEeccccccccccCCceeeccceecccccCc
Q 044846           76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY----QAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDP  151 (290)
Q Consensus        76 ~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~----~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aP  151 (290)
                      ++..+..++.||+.||.|||+++   |+||||||+|||++.++    .+||+|||+++.....  .......||+.|+||
T Consensus       112 ~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aP  186 (326)
T 2y0a_A          112 TEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAP  186 (326)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTT--SCCCCCCSCTTTCCH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCC--CccccccCCcCcCCc
Confidence            99999999999999999999999   99999999999999887    7999999998654322  222345689999999


Q ss_pred             cccccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------hhhhHHHHHHHHHHHHHhhccCCCCCCC
Q 044846          152 KYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------KEAEKEEVITFAMVAKRCLNLNGKKQPT  225 (290)
Q Consensus       152 E~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~Rps  225 (290)
                      |++.+..++.++|||||||++|+|++|.+||........ ......      .......+..+.+||.+||+.||.+|||
T Consensus       187 E~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  265 (326)
T 2y0a_A          187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMT  265 (326)
T ss_dssp             HHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             eeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCC
Confidence            999999999999999999999999999998865432221 111111      1112234567899999999999999999


Q ss_pred             HHHHHHHHHh
Q 044846          226 MKEVTLELAG  235 (290)
Q Consensus       226 ~~el~~~l~~  235 (290)
                      +.|++++.+-
T Consensus       266 ~~e~l~hp~~  275 (326)
T 2y0a_A          266 IQDSLQHPWI  275 (326)
T ss_dssp             HHHHHHSTTT
T ss_pred             HHHHhcCCCc
Confidence            9999988653


No 46 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.8e-43  Score=308.24  Aligned_cols=225  Identities=19%  Similarity=0.213  Sum_probs=186.7

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      |+.||+|.++.. ......+.+|+.+++.++||||+++++++...+..++|||||++|+|.+++.....   .+++..+.
T Consensus        30 ~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~---~~~~~~~~  105 (321)
T 1tki_A           30 KKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAF---ELNEREIV  105 (321)
T ss_dssp             TEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSC---CCCHHHHH
T ss_pred             CcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCC---CCCHHHHH
Confidence            578999998753 34566789999999999999999999999999999999999999999999976432   58999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEecc--CCcEEEeccccccccccCCceeeccceecccccCccccccCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD--KYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQF  159 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~  159 (290)
                      .++.||+.||.|||+++   |+||||||+|||++.  ++.+||+|||+++.....  .......||+.|+|||++.+..+
T Consensus       106 ~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~  180 (321)
T 1tki_A          106 SYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG--DNFRLLFTAPEYYAPEVHQHDVV  180 (321)
T ss_dssp             HHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT--CEEEEEESCGGGSCHHHHTTCEE
T ss_pred             HHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC--CccccccCChhhcCcHHhcCCCC
Confidence            99999999999999999   999999999999987  789999999998654322  22344678999999999998888


Q ss_pred             CCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q 044846          160 TEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLEL  233 (290)
Q Consensus       160 ~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l  233 (290)
                      +.++|||||||++|+|++|.+||........ ......      .......+.++.+||.+||+.||.+|||+.|++++.
T Consensus       181 ~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp  259 (321)
T 1tki_A          181 STATDMWSLGTLVYVLLSGINPFLAETNQQI-IENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHP  259 (321)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCcCCCHHHH-HHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence            9999999999999999999998865433221 111111      111223467799999999999999999999999986


Q ss_pred             Hhh
Q 044846          234 AGI  236 (290)
Q Consensus       234 ~~~  236 (290)
                      +-.
T Consensus       260 ~~~  262 (321)
T 1tki_A          260 WLK  262 (321)
T ss_dssp             HHH
T ss_pred             hhc
Confidence            643


No 47 
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=1.4e-43  Score=327.44  Aligned_cols=230  Identities=20%  Similarity=0.314  Sum_probs=189.4

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      ++.||||+++... ...+.|.+|+.+|++++||||++++++|...+..+||||||++|+|.+++......  .+++..++
T Consensus       245 ~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~--~~~~~~~~  321 (495)
T 1opk_A          245 SLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ--EVSAVVLL  321 (495)
T ss_dssp             TEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTT--TSCHHHHH
T ss_pred             CeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcC--CCCHHHHH
Confidence            5679999997543 34778999999999999999999999999999999999999999999999865432  58899999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTE  161 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~  161 (290)
                      .++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++..............++..|+|||++.+..++.
T Consensus       322 ~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  398 (495)
T 1opk_A          322 YMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI  398 (495)
T ss_dssp             HHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECH
T ss_pred             HHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCc
Confidence            99999999999999999   999999999999999999999999998765433322333455678899999999889999


Q ss_pred             cccchhhHHHHHHHhc-CCCCcccchhhhhhhHHH---hhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhH
Q 044846          162 KSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAY---FSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIR  237 (290)
Q Consensus       162 ~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~  237 (290)
                      ++|||||||++|||++ |..|+...... ......   .....+..++..+.+||.+||+.||.+|||+.+|++.|+.+.
T Consensus       399 ~sDvwSlG~~l~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          399 KSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             HHhHHhHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence            9999999999999998 77766533211 111111   112223345678999999999999999999999999998774


Q ss_pred             h
Q 044846          238 A  238 (290)
Q Consensus       238 ~  238 (290)
                      .
T Consensus       478 ~  478 (495)
T 1opk_A          478 Q  478 (495)
T ss_dssp             S
T ss_pred             h
Confidence            3


No 48 
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=1.9e-43  Score=315.47  Aligned_cols=232  Identities=19%  Similarity=0.294  Sum_probs=179.7

Q ss_pred             CceEEEEeeccc-CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            2 EELWLLKKSKSV-HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         2 ~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      +..||+|+++.. .....+.|.+|+.++++++||||+++++++...+..++||||+++|+|.+++.....   .+++..+
T Consensus        73 ~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~  149 (373)
T 2qol_A           73 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQL  149 (373)
T ss_dssp             BCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTT---CSCHHHH
T ss_pred             ceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCC---CCCHHHH
Confidence            456999999754 345567899999999999999999999999999999999999999999999986532   5899999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceee--ccceecccccCccccccCC
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLT--TQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~  158 (290)
                      +.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++..........  ....+++.|+|||++.+..
T Consensus       150 ~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  226 (373)
T 2qol_A          150 VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK  226 (373)
T ss_dssp             HHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC----------------------CTTSCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCC
Confidence            999999999999999999   99999999999999999999999999875443222111  2233567899999999999


Q ss_pred             CCCcccchhhHHHHHHHhc-CCCCcccchhhhhhhHHH---hhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          159 FTEKSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAY---FSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      ++.++||||||+++||+++ |..|+....... .....   .....+...+..+.+++.+||+.||.+|||+.++++.|+
T Consensus       227 ~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~  305 (373)
T 2qol_A          227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD  305 (373)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH-HHHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             cCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHH
Confidence            9999999999999999887 887775432221 11111   111222345677999999999999999999999999999


Q ss_pred             hhHhhh
Q 044846          235 GIRASI  240 (290)
Q Consensus       235 ~~~~~~  240 (290)
                      .+....
T Consensus       306 ~~~~~~  311 (373)
T 2qol_A          306 KLIRNP  311 (373)
T ss_dssp             HHHHCG
T ss_pred             HHHhCc
Confidence            887643


No 49 
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=1e-43  Score=310.97  Aligned_cols=229  Identities=21%  Similarity=0.253  Sum_probs=182.1

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCc----ceEEEEeCCCCCHHHHHhhcCCCCCCCCH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEV----PLLVYEFIPNGSLYQYIHEQTDDQLPITW   77 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~   77 (290)
                      |+.||||+++... .....+.+|+.+++.++||||+++++++.....    +++||||+++|+|.+++...     .+++
T Consensus        47 ~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~  120 (322)
T 3soc_A           47 NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN-----VVSW  120 (322)
T ss_dssp             TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC-----CBCH
T ss_pred             CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhc-----CCCH
Confidence            5789999997543 334456679999999999999999999987553    69999999999999999764     4899


Q ss_pred             HHHHHHHHHHHHHHHHHhhC----------CCCCeEeccCCCCceEeccCCcEEEeccccccccccCCce-eeccceecc
Q 044846           78 EMRLRITVEVSRVLSYLHSV----------ASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH-LTTQVKVTF  146 (290)
Q Consensus        78 ~~~~~~~~~i~~~l~ylH~~----------~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~g~~  146 (290)
                      ..++.++.|++.||.|||+.          +   |+||||||+|||++.++.+||+|||+++........ ......||+
T Consensus       121 ~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~  197 (322)
T 3soc_A          121 NELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTR  197 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCG
T ss_pred             HHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCc
Confidence            99999999999999999998          8   999999999999999999999999998654332221 233467899


Q ss_pred             cccCccccccC-----CCCCcccchhhHHHHHHHhcCCCCcccchhh--------------hhhhHHHhh----------
Q 044846          147 GYVDPKYFRSS-----QFTEKSDVYSFSVVLVELNWTKPIHLVDVEE--------------NRSLAAYFS----------  197 (290)
Q Consensus       147 ~y~aPE~~~~~-----~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~--------------~~~~~~~~~----------  197 (290)
                      .|+|||++.+.     .++.++|||||||++|+|++|..||......              .........          
T Consensus       198 ~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (322)
T 3soc_A          198 RYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRD  277 (322)
T ss_dssp             GGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCG
T ss_pred             cccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccc
Confidence            99999999863     4556889999999999999998887543211              000000000          


Q ss_pred             hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhHhh
Q 044846          198 KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRAS  239 (290)
Q Consensus       198 ~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~~  239 (290)
                      .......+..+.+||.+||+.||++|||+.|+++.|+.+.+.
T Consensus       278 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          278 YWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             GGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            001223456699999999999999999999999999998764


No 50 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=5.1e-43  Score=319.06  Aligned_cols=225  Identities=15%  Similarity=0.172  Sum_probs=186.9

Q ss_pred             CceEEEEeecccC--chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKSVH--ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.||+|++....  ....+.+.+|+++++.++||||+++++++...+..|+|||||.+|+|.+.+....    .+++..
T Consensus        36 ~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~----~~~e~~  111 (444)
T 3soa_A           36 GQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE----YYSEAD  111 (444)
T ss_dssp             TEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHHCS----CCCHHH
T ss_pred             CcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcC----CCCHHH
Confidence            6789999986433  3456779999999999999999999999999999999999999999999998765    589999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEec---cCCcEEEeccccccccccCCceeeccceecccccCcccccc
Q 044846           80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLV---DKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRS  156 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~  156 (290)
                      +..++.||+.||.|||+++   |+||||||+|||++   .++.+||+|||++....... .......||+.|+|||++.+
T Consensus       112 ~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~-~~~~~~~gt~~Y~APE~l~~  187 (444)
T 3soa_A          112 ASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEVLRK  187 (444)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC-CBCCCSCSCGGGCCHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC-ceeecccCCcccCCHHHhcC
Confidence            9999999999999999999   99999999999998   45789999999986543222 22345678999999999999


Q ss_pred             CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHH
Q 044846          157 SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVT  230 (290)
Q Consensus       157 ~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~  230 (290)
                      ..++.++||||+||++|+|++|.+||........ ......      .......+..+.+||.+||+.||.+|||+.|++
T Consensus       188 ~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L  266 (444)
T 3soa_A          188 DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRL-YQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEAL  266 (444)
T ss_dssp             CCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred             CCCCCccccHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence            9999999999999999999999999865432211 111111      111234567899999999999999999999999


Q ss_pred             HHHHh
Q 044846          231 LELAG  235 (290)
Q Consensus       231 ~~l~~  235 (290)
                      ++.+-
T Consensus       267 ~hp~~  271 (444)
T 3soa_A          267 KHPWI  271 (444)
T ss_dssp             HSCTT
T ss_pred             cCccc
Confidence            88543


No 51 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=4e-43  Score=312.15  Aligned_cols=223  Identities=18%  Similarity=0.216  Sum_probs=185.0

Q ss_pred             CceEEEEeeccc--CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKSV--HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.||+|+++..  .....+.+.+|+.+++.|+||||+++++++...+..|+||||+++|+|.+++....    .+++..
T Consensus        54 ~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----~~~~~~  129 (362)
T 2bdw_A           54 GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE----FYSEAD  129 (362)
T ss_dssp             CCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCS----CCCHHH
T ss_pred             CCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcC----CCCHHH
Confidence            678999998643  34556789999999999999999999999999999999999999999999997654    589999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccC---CcEEEeccccccccccCCceeeccceecccccCcccccc
Q 044846           80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDK---YQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRS  156 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~  156 (290)
                      +..++.||+.||.|||+++   |+||||||+|||++.+   +.+||+|||++.....  ........||+.|+|||++.+
T Consensus       130 ~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~--~~~~~~~~gt~~y~aPE~~~~  204 (362)
T 2bdw_A          130 ASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND--SEAWHGFAGTPGYLSPEVLKK  204 (362)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT--CCSCCCSCSCTTTCCHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceEecC--CcccccCCCCccccCHHHHcc
Confidence            9999999999999999999   9999999999999865   4599999999865432  222344678999999999999


Q ss_pred             CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHH
Q 044846          157 SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVT  230 (290)
Q Consensus       157 ~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~  230 (290)
                      ..++.++|||||||++|+|++|.+||....... .......      .......+..+.+||.+||+.||++|||+.|++
T Consensus       205 ~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l  283 (362)
T 2bdw_A          205 DPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-LYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQAL  283 (362)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence            899999999999999999999999986543221 1111111      111234467799999999999999999999999


Q ss_pred             HHHH
Q 044846          231 LELA  234 (290)
Q Consensus       231 ~~l~  234 (290)
                      ++.+
T Consensus       284 ~hp~  287 (362)
T 2bdw_A          284 KVPW  287 (362)
T ss_dssp             TSHH
T ss_pred             cCcc
Confidence            8754


No 52 
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=2.7e-43  Score=302.36  Aligned_cols=229  Identities=19%  Similarity=0.277  Sum_probs=175.9

Q ss_pred             ceEEEEeeccc-CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            3 ELWLLKKSKSV-HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         3 ~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      ..||+|+.+.. .....+.+.+|+.+++.++||||+++++++. .+..++||||+++|+|.+++.....   .+++..+.
T Consensus        44 ~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~  119 (281)
T 1mp8_A           44 LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKY---SLDLASLI  119 (281)
T ss_dssp             EEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTTT---TSCHHHHH
T ss_pred             eEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEecCCCCCHHHHHHhcCC---CCCHHHHH
Confidence            45899988753 3445678999999999999999999999984 5678999999999999999986542   58999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTE  161 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~  161 (290)
                      .++.|++.||.|||+++   |+||||||+||+++.++.+||+|||+++..............+++.|+|||++.+..++.
T Consensus       120 ~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  196 (281)
T 1mp8_A          120 LYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS  196 (281)
T ss_dssp             HHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHHCCCSH
T ss_pred             HHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccccCcccccccccCCCcccccChhhcccCCCCC
Confidence            99999999999999999   999999999999999999999999998754433222233445678899999999889999


Q ss_pred             cccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHh---hhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhH
Q 044846          162 KSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYF---SKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIR  237 (290)
Q Consensus       162 ~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~  237 (290)
                      ++||||||+++|+|++ |.+||....... ......   ....+...+..+.+++.+||+.||++|||+.+++++|+.+.
T Consensus       197 ~~Di~slG~~l~ell~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  275 (281)
T 1mp8_A          197 ASDVWMFGVCMWEILMHGVKPFQGVKNND-VIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  275 (281)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCTTTTCCGGG-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccCchHHHHHHHHHHhcCCCCCCcCCHHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999996 777775432221 111111   11223345677999999999999999999999999999886


Q ss_pred             hh
Q 044846          238 AS  239 (290)
Q Consensus       238 ~~  239 (290)
                      ..
T Consensus       276 ~~  277 (281)
T 1mp8_A          276 EE  277 (281)
T ss_dssp             HH
T ss_pred             HH
Confidence            54


No 53 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=2.3e-43  Score=316.66  Aligned_cols=225  Identities=19%  Similarity=0.252  Sum_probs=182.2

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW   77 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~   77 (290)
                      |+.||+|+++..   .....+.+.+|..++.++ +||||++++++|...+..|+|||||++|+|..++....    .+++
T Consensus        77 ~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~----~l~~  152 (396)
T 4dc2_A           77 DRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR----KLPE  152 (396)
T ss_dssp             TEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS----SCCH
T ss_pred             CCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcC----CCCH
Confidence            578999998643   233455688999999987 89999999999999999999999999999999998765    5899


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccC
Q 044846           78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSS  157 (290)
Q Consensus        78 ~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  157 (290)
                      ..++.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++.... .........||+.|+|||++.+.
T Consensus       153 ~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~-~~~~~~~~~gt~~Y~aPE~l~~~  228 (396)
T 4dc2_A          153 EHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PGDTTSTFCGTPNYIAPEILRGE  228 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC-TTCCBCCCCBCGGGCCHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeeccc-CCCccccccCCcccCCchhhcCC
Confidence            999999999999999999999   99999999999999999999999999874222 22234557799999999999999


Q ss_pred             CCCCcccchhhHHHHHHHhcCCCCcccchhh-------hh-hhHHHh--hhhhhHHHHHHHHHHHHHhhccCCCCCCCH-
Q 044846          158 QFTEKSDVYSFSVVLVELNWTKPIHLVDVEE-------NR-SLAAYF--SKEAEKEEVITFAMVAKRCLNLNGKKQPTM-  226 (290)
Q Consensus       158 ~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~-------~~-~~~~~~--~~~~~~~~~~~~~~li~~cl~~dp~~Rps~-  226 (290)
                      .++.++|||||||++|+|++|.+||......       .. ......  ....+...+..+.+||.+||+.||.+||++ 
T Consensus       229 ~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~  308 (396)
T 4dc2_A          229 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCH  308 (396)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTSTTCS
T ss_pred             CCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCcCCHHHHHHHHHHhcCCHhHcCCCC
Confidence            9999999999999999999999998532110       00 111111  112223456779999999999999999985 


Q ss_pred             -----HHHHHHHH
Q 044846          227 -----KEVTLELA  234 (290)
Q Consensus       227 -----~el~~~l~  234 (290)
                           .|+++|.+
T Consensus       309 ~~~~~~ei~~Hpf  321 (396)
T 4dc2_A          309 PQTGFADIQGHPF  321 (396)
T ss_dssp             TTTHHHHHHHSTT
T ss_pred             CCCCHHHHhcCcc
Confidence                 68877753


No 54 
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=3.1e-43  Score=306.08  Aligned_cols=233  Identities=22%  Similarity=0.310  Sum_probs=189.1

Q ss_pred             ceEEEEeeccc-CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCC-----------
Q 044846            3 ELWLLKKSKSV-HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD-----------   70 (290)
Q Consensus         3 ~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-----------   70 (290)
                      +.||+|+++.. .....+.+.+|+++++.++||||+++++++...+..++||||+++|+|.+++.....           
T Consensus        54 ~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  133 (314)
T 2ivs_A           54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS  133 (314)
T ss_dssp             EEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC-----
T ss_pred             ceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCccccccc
Confidence            67999998753 355677899999999999999999999999999999999999999999999987542           


Q ss_pred             ---------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCce-eec
Q 044846           71 ---------DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH-LTT  140 (290)
Q Consensus        71 ---------~~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~  140 (290)
                               ....+++..++.++.||+.||.|||+++   |+||||||+||+++.++.+||+|||++......... ...
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~  210 (314)
T 2ivs_A          134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRS  210 (314)
T ss_dssp             -----------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSS
T ss_pred             ccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---CcccccchheEEEcCCCCEEEccccccccccccccceecc
Confidence                     1124889999999999999999999999   999999999999999999999999998654332222 123


Q ss_pred             cceecccccCccccccCCCCCcccchhhHHHHHHHhc-CCCCcccchhhhh--hhHHHhhhhhhHHHHHHHHHHHHHhhc
Q 044846          141 QVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNW-TKPIHLVDVEENR--SLAAYFSKEAEKEEVITFAMVAKRCLN  217 (290)
Q Consensus       141 ~~~g~~~y~aPE~~~~~~~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~cl~  217 (290)
                      ...+++.|+|||++.+..++.++||||||+++|+|++ |..|+........  ..........+...+..+.+++.+||+
T Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  290 (314)
T 2ivs_A          211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWK  290 (314)
T ss_dssp             CCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCCCCccCCHHHHHHHHHHcc
Confidence            3456788999999998889999999999999999998 8877754322111  111111112233456789999999999


Q ss_pred             cCCCCCCCHHHHHHHHHhhHh
Q 044846          218 LNGKKQPTMKEVTLELAGIRA  238 (290)
Q Consensus       218 ~dp~~Rps~~el~~~l~~~~~  238 (290)
                      .||.+|||+.+++++|+.+..
T Consensus       291 ~dp~~Rps~~~l~~~l~~~~~  311 (314)
T 2ivs_A          291 QEPDKRPVFADISKDLEKMMV  311 (314)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHH
T ss_pred             CChhhCcCHHHHHHHHHHHHh
Confidence            999999999999999998764


No 55 
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=2.4e-43  Score=310.61  Aligned_cols=234  Identities=18%  Similarity=0.272  Sum_probs=188.0

Q ss_pred             ceEEEEeeccc-CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCC----------
Q 044846            3 ELWLLKKSKSV-HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDD----------   71 (290)
Q Consensus         3 ~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~----------   71 (290)
                      +.||+|+++.. .....+.+.+|+.+++.++||||+++++++...+..++||||+++|+|.+++......          
T Consensus        78 ~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  157 (343)
T 1luf_A           78 TMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL  157 (343)
T ss_dssp             EEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC-----------
T ss_pred             eeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccc
Confidence            67999999754 3445678999999999999999999999999999999999999999999999874321          


Q ss_pred             ----------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCc-eeec
Q 044846           72 ----------QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT-HLTT  140 (290)
Q Consensus        72 ----------~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~  140 (290)
                                ...+++..++.++.||+.||.|||+++   |+||||||+||+++.++.+||+|||+++....... ....
T Consensus       158 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  234 (343)
T 1luf_A          158 STRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADG  234 (343)
T ss_dssp             -----------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC---
T ss_pred             cccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEECCCCeEEEeecCCCcccccCccccccC
Confidence                      136899999999999999999999999   99999999999999999999999999864332211 2223


Q ss_pred             cceecccccCccccccCCCCCcccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHhh---hhhhHHHHHHHHHHHHHhh
Q 044846          141 QVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYFS---KEAEKEEVITFAMVAKRCL  216 (290)
Q Consensus       141 ~~~g~~~y~aPE~~~~~~~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl  216 (290)
                      ...+++.|+|||++.+..++.++||||||+++|+|++ |..|+........ ......   ...+...+..+.+|+.+||
T Consensus       235 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l  313 (343)
T 1luf_A          235 NDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV-IYYVRDGNILACPENCPLELYNLMRLCW  313 (343)
T ss_dssp             -CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-HHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHH-HHHHhCCCcCCCCCCCCHHHHHHHHHHc
Confidence            4567889999999999999999999999999999998 8877754332211 111111   1122345667999999999


Q ss_pred             ccCCCCCCCHHHHHHHHHhhHhhh
Q 044846          217 NLNGKKQPTMKEVTLELAGIRASI  240 (290)
Q Consensus       217 ~~dp~~Rps~~el~~~l~~~~~~~  240 (290)
                      +.||.+|||+.+++++|+.+....
T Consensus       314 ~~~p~~Rps~~~~~~~L~~~~~~~  337 (343)
T 1luf_A          314 SKLPADRPSFCSIHRILQRMCERA  337 (343)
T ss_dssp             CSSGGGSCCHHHHHHHHHHTTC--
T ss_pred             ccCcccCCCHHHHHHHHHHHHhhh
Confidence            999999999999999999886543


No 56 
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=8.7e-43  Score=303.27  Aligned_cols=231  Identities=22%  Similarity=0.288  Sum_probs=182.6

Q ss_pred             ceEEEEeeccc--CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            3 ELWLLKKSKSV--HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         3 ~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      ..+|+|+++..  .....+.+.+|+++++.++||||+++++++. .+..++||||+.+|+|.+++.....   .+++..+
T Consensus        59 ~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~  134 (307)
T 3lb7_A           59 GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLHVQET---KFQMFQL  134 (307)
T ss_dssp             SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCBHHHHHHTSCC---CCCHHHH
T ss_pred             CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCCCcHHHHHHhccc---CCCHHHH
Confidence            35788887643  3455678999999999999999999999875 4568999999999999999975433   5899999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEecccccccccc-CCceeeccceecccccCccccc---c
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAI-DRTHLTTQVKVTFGYVDPKYFR---S  156 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~-~~~~~~~~~~g~~~y~aPE~~~---~  156 (290)
                      +.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++..... ..........||+.|+|||++.   +
T Consensus       135 ~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  211 (307)
T 3lb7_A          135 IDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDN  211 (307)
T ss_dssp             HHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC------------CCCCTTSCCHHHHHCCSS
T ss_pred             HHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceecccccccccccCCCCCcceECcceeeccCC
Confidence            999999999999999999   99999999999999999999999999864332 1122234457899999999986   5


Q ss_pred             CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh-------hhhHHHHHHHHHHHHHhhccCCCCCCCHHHH
Q 044846          157 SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK-------EAEKEEVITFAMVAKRCLNLNGKKQPTMKEV  229 (290)
Q Consensus       157 ~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~cl~~dp~~Rps~~el  229 (290)
                      ..++.++|||||||++|+|++|..||................       .....++..+.+|+.+||+.||++|||+.|+
T Consensus       212 ~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i  291 (307)
T 3lb7_A          212 NPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQI  291 (307)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHH
Confidence            668889999999999999999999886433322221111111       1112346779999999999999999999999


Q ss_pred             HHHHHhhHhhh
Q 044846          230 TLELAGIRASI  240 (290)
Q Consensus       230 ~~~l~~~~~~~  240 (290)
                      +++|+.+....
T Consensus       292 l~~l~~l~~~~  302 (307)
T 3lb7_A          292 LSSIELLQHSL  302 (307)
T ss_dssp             HHHHHHHHTTC
T ss_pred             HHHHHHHHhhc
Confidence            99999887654


No 57 
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=2.1e-43  Score=303.07  Aligned_cols=230  Identities=20%  Similarity=0.304  Sum_probs=187.7

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      ++.||+|+++..... .+.+.+|+++++.++||||+++++++...+..++||||+++|+|.+++.....   .+++..++
T Consensus        48 ~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~  123 (283)
T 3gen_A           48 QYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH---RFQTQQLL  123 (283)
T ss_dssp             TEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGG---CCCHHHHH
T ss_pred             CCeEEEEEecCCCCC-HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhcc---CCCHHHHH
Confidence            357999999864333 46789999999999999999999999999999999999999999999986432   58999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTE  161 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~  161 (290)
                      .++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++...............+++.|+|||++.+..++.
T Consensus       124 ~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  200 (283)
T 3gen_A          124 EMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS  200 (283)
T ss_dssp             HHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSH
T ss_pred             HHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccccccccccCCccCcccCCHHHhccCCCCc
Confidence            99999999999999999   999999999999999999999999998654332222233345677899999999899999


Q ss_pred             cccchhhHHHHHHHhc-CCCCcccchhhhhh--hHHHhhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhHh
Q 044846          162 KSDVYSFSVVLVELNW-TKPIHLVDVEENRS--LAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRA  238 (290)
Q Consensus       162 ~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~  238 (290)
                      ++||||||+++|+|++ |..||.........  +........+...+..+.+++.+||+.||.+|||+.+++++|+.+..
T Consensus       201 ~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~  280 (283)
T 3gen_A          201 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD  280 (283)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence            9999999999999998 88777543322111  11111112223345678999999999999999999999999988764


No 58 
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=4.5e-43  Score=320.40  Aligned_cols=225  Identities=24%  Similarity=0.379  Sum_probs=184.6

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC-cceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETE-VPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      |+.||||+++...  ..+.|.+|+++|++++||||+++++++.... ..++|||||++|+|.+++......  .+++..+
T Consensus       216 ~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~--~~~~~~~  291 (450)
T 1k9a_A          216 GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS--VLGGDCL  291 (450)
T ss_dssp             TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTT--TCCHHHH
T ss_pred             CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCC--CCCHHHH
Confidence            5789999998643  5678999999999999999999999987765 789999999999999999876432  4788999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCCC
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFT  160 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~  160 (290)
                      +.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++.....    .....+++.|+|||++.+..++
T Consensus       292 ~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~~~~~~~~y~aPE~~~~~~~~  364 (450)
T 1k9a_A          292 LKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----QDTGKLPVKWTAPEALREKKFS  364 (450)
T ss_dssp             HHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC----------CCCTTTSCHHHHHSSCCC
T ss_pred             HHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCccccccc----ccCCCCCcceeCHHHhcCCCCC
Confidence            999999999999999999   999999999999999999999999998643211    1223567889999999999999


Q ss_pred             CcccchhhHHHHHHHhc-CCCCcccchhhhhhhHHH---hhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 044846          161 EKSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAY---FSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGI  236 (290)
Q Consensus       161 ~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~  236 (290)
                      .++||||||+++|||++ |..|+...... ......   .....+..++..+.+||.+||+.||.+|||+.++++.|+.+
T Consensus       365 ~~sDvwslG~~l~el~t~g~~P~~~~~~~-~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i  443 (450)
T 1k9a_A          365 TKSDVWSFGILLWEIYSFGRVPYPRIPLK-DVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI  443 (450)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCSSTTSCTT-THHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            99999999999999997 88777533211 111111   11223345567899999999999999999999999999987


Q ss_pred             Hh
Q 044846          237 RA  238 (290)
Q Consensus       237 ~~  238 (290)
                      ..
T Consensus       444 ~~  445 (450)
T 1k9a_A          444 RT  445 (450)
T ss_dssp             HH
T ss_pred             HH
Confidence            64


No 59 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=1.3e-43  Score=314.28  Aligned_cols=224  Identities=20%  Similarity=0.223  Sum_probs=182.8

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW   77 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~   77 (290)
                      |+.||+|+++..   .....+.+.+|..+++.+ +||||+++++++...+..|+|||||++|+|..++....    .+++
T Consensus        48 ~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~----~~~~  123 (353)
T 3txo_A           48 GDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSR----RFDE  123 (353)
T ss_dssp             CCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS----SCCH
T ss_pred             CCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC----CCCH
Confidence            678999998742   344567788999999998 79999999999999999999999999999999998765    5899


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccC
Q 044846           78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSS  157 (290)
Q Consensus        78 ~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  157 (290)
                      ..++.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++..... ........||+.|+|||++.+.
T Consensus       124 ~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~  199 (353)
T 3txo_A          124 ARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN-GVTTATFCGTPDYIAPEILQEM  199 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC----------CCGGGCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeecccC-CccccccCCCcCeEChhhcCCC
Confidence            999999999999999999999   999999999999999999999999998743222 2233456799999999999998


Q ss_pred             CCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh--hhhHHHHHHHHHHHHHhhccCCCCCCCH------HHH
Q 044846          158 QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK--EAEKEEVITFAMVAKRCLNLNGKKQPTM------KEV  229 (290)
Q Consensus       158 ~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~dp~~Rps~------~el  229 (290)
                      .++.++|||||||++|+|++|.+||....... ........  ..+...+..+.+||.+||+.||.+||++      .|+
T Consensus       200 ~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~i  278 (353)
T 3txo_A          200 LYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD-LFEAILNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAI  278 (353)
T ss_dssp             HCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHH
T ss_pred             CcCCccCCCcchHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHH
Confidence            99999999999999999999999986543321 11111111  1223356678999999999999999998      788


Q ss_pred             HHHHH
Q 044846          230 TLELA  234 (290)
Q Consensus       230 ~~~l~  234 (290)
                      ++|.+
T Consensus       279 l~hp~  283 (353)
T 3txo_A          279 LRHPF  283 (353)
T ss_dssp             HTSGG
T ss_pred             hhCCc
Confidence            87754


No 60 
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.2e-43  Score=309.45  Aligned_cols=235  Identities=20%  Similarity=0.304  Sum_probs=186.2

Q ss_pred             ceEEEEeeccc-CchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCC---------
Q 044846            3 ELWLLKKSKSV-HESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDD---------   71 (290)
Q Consensus         3 ~~~avK~~~~~-~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~---------   71 (290)
                      +.||+|+++.. .....+.+.+|+.+++.+ +||||+++++++...+..++||||+++|+|.+++......         
T Consensus        76 ~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~  155 (344)
T 1rjb_A           76 IQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYE  155 (344)
T ss_dssp             EEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC--------
T ss_pred             eEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchh
Confidence            46999998743 344567899999999999 9999999999999999999999999999999999865421         


Q ss_pred             ----------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCc-eeec
Q 044846           72 ----------QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT-HLTT  140 (290)
Q Consensus        72 ----------~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~  140 (290)
                                ...+++..++.++.||+.||.|||+++   |+||||||+||+++.++.+||+|||++........ ....
T Consensus       156 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~  232 (344)
T 1rjb_A          156 NQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRG  232 (344)
T ss_dssp             -------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEET
T ss_pred             hhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEEcCCCcEEeCCCccCcccccCccceecc
Confidence                      124789999999999999999999999   99999999999999999999999999875433222 2234


Q ss_pred             cceecccccCccccccCCCCCcccchhhHHHHHHHhc-CCCCcccchhhhhhh---HHHhhhhhhHHHHHHHHHHHHHhh
Q 044846          141 QVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNW-TKPIHLVDVEENRSL---AAYFSKEAEKEEVITFAMVAKRCL  216 (290)
Q Consensus       141 ~~~g~~~y~aPE~~~~~~~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~cl  216 (290)
                      ...+|+.|+|||++.+..++.++||||||+++|+|++ |..|+..........   ........+...+..+.+|+.+||
T Consensus       233 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  312 (344)
T 1rjb_A          233 NARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCW  312 (344)
T ss_dssp             TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHc
Confidence            4667889999999999999999999999999999997 887775432211111   111111223345678999999999


Q ss_pred             ccCCCCCCCHHHHHHHHHhhHhhh
Q 044846          217 NLNGKKQPTMKEVTLELAGIRASI  240 (290)
Q Consensus       217 ~~dp~~Rps~~el~~~l~~~~~~~  240 (290)
                      +.||.+|||+.+++++|+.+....
T Consensus       313 ~~dp~~Rps~~~l~~~l~~~~~~~  336 (344)
T 1rjb_A          313 AFDSRKRPSFPNLTSFLGCQLADA  336 (344)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHC---
T ss_pred             CCCchhCcCHHHHHHHHHHHHHHH
Confidence            999999999999999999886654


No 61 
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=9.9e-44  Score=325.13  Aligned_cols=230  Identities=19%  Similarity=0.284  Sum_probs=186.0

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      ++.||||+++... ...+.|.+|+.+|+.++||||+++++++. .+..++|||||++|+|.+++......  .+++..+.
T Consensus       212 ~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~--~~~~~~~~  287 (454)
T 1qcf_A          212 HTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGS--KQPLPKLI  287 (454)
T ss_dssp             TEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHHSHHHH--TCCHHHHH
T ss_pred             ccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHHHHHHhccCC--CCCHHHHH
Confidence            4579999998643 45778999999999999999999999986 66789999999999999999854321  47888999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTE  161 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~  161 (290)
                      .++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++..............++..|+|||++....++.
T Consensus       288 ~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  364 (454)
T 1qcf_A          288 DFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTI  364 (454)
T ss_dssp             HHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCH
T ss_pred             HHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCc
Confidence            99999999999999999   999999999999999999999999998754322111223344677899999999899999


Q ss_pred             cccchhhHHHHHHHhc-CCCCcccchhhhh--hhHHHhhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhHh
Q 044846          162 KSDVYSFSVVLVELNW-TKPIHLVDVEENR--SLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRA  238 (290)
Q Consensus       162 ~~DiwS~G~il~~l~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~  238 (290)
                      ++|||||||++|||++ |..|+........  .+........+..++..+.+||.+||+.||++|||+.+|+..|+.+..
T Consensus       365 ~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~  444 (454)
T 1qcf_A          365 KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT  444 (454)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred             HHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence            9999999999999998 8877754322111  111111122234456789999999999999999999999999988754


No 62 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=5.4e-43  Score=309.35  Aligned_cols=225  Identities=20%  Similarity=0.256  Sum_probs=183.9

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW   77 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~   77 (290)
                      |+.||+|+++..   .....+.+.+|..++..+ +||||+++++++...+..|+||||+++|+|..++....    .+++
T Consensus        34 ~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----~l~~  109 (345)
T 3a8x_A           34 DRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR----KLPE  109 (345)
T ss_dssp             TEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS----SCCH
T ss_pred             CCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC----CCCH
Confidence            678999998643   344567788999999998 89999999999999999999999999999999998765    5899


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccC
Q 044846           78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSS  157 (290)
Q Consensus        78 ~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  157 (290)
                      ..++.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++..... ........||+.|+|||++.+.
T Consensus       110 ~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~  185 (345)
T 3a8x_A          110 EHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDTTSTFCGTPNYIAPEILRGE  185 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT-TCCBCCCCSCGGGCCHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccCC-CCcccccCCCccccCccccCCC
Confidence            999999999999999999999   999999999999999999999999998743211 2233456789999999999999


Q ss_pred             CCCCcccchhhHHHHHHHhcCCCCcccchh-------hhhhh-HHHhh--hhhhHHHHHHHHHHHHHhhccCCCCCCCH-
Q 044846          158 QFTEKSDVYSFSVVLVELNWTKPIHLVDVE-------ENRSL-AAYFS--KEAEKEEVITFAMVAKRCLNLNGKKQPTM-  226 (290)
Q Consensus       158 ~~~~~~DiwS~G~il~~l~~~~~~~~~~~~-------~~~~~-~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rps~-  226 (290)
                      .++.++|+|||||++|+|++|.+||.....       ..... .....  ...+...+..+.+||.+||+.||.+||++ 
T Consensus       186 ~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~  265 (345)
T 3a8x_A          186 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCH  265 (345)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCC
T ss_pred             CCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhcCCHhHCCCCC
Confidence            999999999999999999999998853110       00011 11111  11223356679999999999999999995 


Q ss_pred             -----HHHHHHHH
Q 044846          227 -----KEVTLELA  234 (290)
Q Consensus       227 -----~el~~~l~  234 (290)
                           .|++.|.+
T Consensus       266 ~~~~~~~i~~hp~  278 (345)
T 3a8x_A          266 PQTGFADIQGHPF  278 (345)
T ss_dssp             TTTHHHHHHTSGG
T ss_pred             CcCCHHHHhcCCc
Confidence                 68877654


No 63 
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=4.5e-43  Score=313.04  Aligned_cols=225  Identities=19%  Similarity=0.171  Sum_probs=187.8

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      |+.||+|+++.......+.+.+|+++++.++||||+++++++...+..+|||||+++|+|.+++.....   .+++..+.
T Consensus       114 g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~---~l~~~~~~  190 (373)
T 2x4f_A          114 GLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESY---NLTELDTI  190 (373)
T ss_dssp             CCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGG---GCCHHHHH
T ss_pred             CcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCC---CCCHHHHH
Confidence            678999999876667788899999999999999999999999999999999999999999999876432   58899999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEe--ccCCcEEEeccccccccccCCceeeccceecccccCccccccCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILL--VDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQF  159 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~--~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~  159 (290)
                      .++.||+.||.|||+++   |+||||||+|||+  +.++.+||+|||+++.....  .......||+.|+|||++.+..+
T Consensus       191 ~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~  265 (373)
T 2x4f_A          191 LFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR--EKLKVNFGTPEFLAPEVVNYDFV  265 (373)
T ss_dssp             HHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT--CBCCCCCSSCTTCCHHHHTTCBC
T ss_pred             HHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCc--cccccccCCCcEeChhhccCCCC
Confidence            99999999999999999   9999999999999  56678999999998754322  22234568999999999998889


Q ss_pred             CCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q 044846          160 TEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLEL  233 (290)
Q Consensus       160 ~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l  233 (290)
                      +.++|||||||++|+|++|..||........ +.....      .......+..+.+||.+||+.||.+|||+.|++++.
T Consensus       266 ~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp  344 (373)
T 2x4f_A          266 SFPTDMWSVGVIAYMLLSGLSPFLGDNDAET-LNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHP  344 (373)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred             CcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence            9999999999999999999998865433221 111111      111234567899999999999999999999999875


Q ss_pred             Hh
Q 044846          234 AG  235 (290)
Q Consensus       234 ~~  235 (290)
                      +-
T Consensus       345 ~~  346 (373)
T 2x4f_A          345 WL  346 (373)
T ss_dssp             HH
T ss_pred             Cc
Confidence            53


No 64 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=5.1e-43  Score=306.21  Aligned_cols=221  Identities=19%  Similarity=0.223  Sum_probs=185.5

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|+++..   .....+.+.+|+.+++.++||||+++++++.+....|+||||+++|+|.+++....    .+++.
T Consensus        31 ~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----~~~~~  106 (318)
T 1fot_A           31 GRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQ----RFPNP  106 (318)
T ss_dssp             CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTS----SCCHH
T ss_pred             CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcC----CCCHH
Confidence            678999998642   23456778899999999999999999999999999999999999999999998754    58999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCC
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .++.++.||+.||.|||+++   |+||||||+|||++.+|.+||+|||+++....    ......||+.|+|||++.+..
T Consensus       107 ~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~~~  179 (318)
T 1fot_A          107 VAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYTLCGTPDYIAPEVVSTKP  179 (318)
T ss_dssp             HHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSS----CBCCCCSCTTTCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCC----ccccccCCccccCHhHhcCCC
Confidence            99999999999999999999   99999999999999999999999999875432    223467899999999999999


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh--hhhhHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS--KEAEKEEVITFAMVAKRCLNLNGKKQP-----TMKEVTL  231 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rp-----s~~el~~  231 (290)
                      ++.++|+|||||++|+|++|.+||....... .......  ...+...+.++.++|.+||+.||.+||     +++++++
T Consensus       180 ~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          180 YNKSIDWWSFGILIYEMLAGYTPFYDSNTMK-TYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             BCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCcccchhhhHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence            9999999999999999999999886543221 1111111  112233456799999999999999999     8999988


Q ss_pred             HHH
Q 044846          232 ELA  234 (290)
Q Consensus       232 ~l~  234 (290)
                      |.+
T Consensus       259 hp~  261 (318)
T 1fot_A          259 HPW  261 (318)
T ss_dssp             SGG
T ss_pred             Ccc
Confidence            754


No 65 
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=4.5e-42  Score=300.00  Aligned_cols=229  Identities=20%  Similarity=0.250  Sum_probs=185.2

Q ss_pred             CceEEEEeecccC-chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC--cceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSVH-ESNVEQFINEVVILSQINHRNVVKILGCCLETE--VPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||||+++... ....+.+.+|+++++.++||||+++++++....  ..++||||+++|+|.+++...... ..+++.
T Consensus        34 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~  112 (319)
T 4euu_A           34 GDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNA-YGLPES  112 (319)
T ss_dssp             CCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGT-TCCCHH
T ss_pred             CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccc-cCCCHH
Confidence            6789999997533 345678889999999999999999999998765  779999999999999999875432 248999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEe----ccCCcEEEeccccccccccCCceeeccceecccccCcccc
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL----VDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYF  154 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~----~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~  154 (290)
                      .++.++.||+.||.|||+++   |+||||||+|||+    +.++.+||+|||+++.....  .......||..|+|||++
T Consensus       113 ~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~  187 (319)
T 4euu_A          113 EFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD--EQFVSLYGTEEYLHPDMY  187 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTT--CCBCCCCSCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCceecCCC--CceeecccCCCccCHHHh
Confidence            99999999999999999999   9999999999999    77888999999998654322  223345689999999998


Q ss_pred             c--------cCCCCCcccchhhHHHHHHHhcCCCCcccchhh---hhhhHHHhhh-------------------------
Q 044846          155 R--------SSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEE---NRSLAAYFSK-------------------------  198 (290)
Q Consensus       155 ~--------~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~---~~~~~~~~~~-------------------------  198 (290)
                      .        +..++.++|||||||++|+|++|..||......   ..........                         
T Consensus       188 ~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  267 (319)
T 4euu_A          188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPV  267 (319)
T ss_dssp             HHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCT
T ss_pred             hhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCc
Confidence            6        467889999999999999999999988532211   1111111110                         


Q ss_pred             --hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 044846          199 --EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGI  236 (290)
Q Consensus       199 --~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~  236 (290)
                        .........+.+++.+||+.||++|||++|++++..+.
T Consensus       268 ~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          268 SCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             TCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             ccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence              12245667899999999999999999999999998754


No 66 
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=4e-43  Score=307.69  Aligned_cols=233  Identities=21%  Similarity=0.275  Sum_probs=189.6

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEE--eCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCL--ETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~--~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.||+|++........+.+.+|+++++.++||||+++++++.  ..+..++||||+++|+|.+++.....   .+++..
T Consensus        52 ~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~  128 (327)
T 3lxl_A           52 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA---RLDASR  128 (327)
T ss_dssp             SEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGG---GCCHHH
T ss_pred             ceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhccc---CCCHHH
Confidence            5789999998877777888999999999999999999999987  45668999999999999999987542   589999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCce--eeccceecccccCccccccC
Q 044846           80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH--LTTQVKVTFGYVDPKYFRSS  157 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~  157 (290)
                      ++.++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++.........  ......++..|+|||++.+.
T Consensus       129 ~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  205 (327)
T 3lxl_A          129 LLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN  205 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccC
Confidence            9999999999999999999   999999999999999999999999998754433222  22335678889999999988


Q ss_pred             CCCCcccchhhHHHHHHHhcCCCCcccchhhhhhh-------------HHHh----hhhhhHHHHHHHHHHHHHhhccCC
Q 044846          158 QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSL-------------AAYF----SKEAEKEEVITFAMVAKRCLNLNG  220 (290)
Q Consensus       158 ~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~-------------~~~~----~~~~~~~~~~~~~~li~~cl~~dp  220 (290)
                      .++.++||||||+++|+|++|..|+..........             ....    ....+...+..+.+||.+||+.||
T Consensus       206 ~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP  285 (327)
T 3lxl_A          206 IFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSP  285 (327)
T ss_dssp             EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             CCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCCh
Confidence            89999999999999999999998876443221110             0000    011122345679999999999999


Q ss_pred             CCCCCHHHHHHHHHhhHhhh
Q 044846          221 KKQPTMKEVTLELAGIRASI  240 (290)
Q Consensus       221 ~~Rps~~el~~~l~~~~~~~  240 (290)
                      .+|||+.|++++|+.+....
T Consensus       286 ~~Rps~~ell~~L~~~~~~~  305 (327)
T 3lxl_A          286 QDRPSFSALGPQLDMLWSGS  305 (327)
T ss_dssp             GGSCCHHHHHHHHHHC----
T ss_pred             hhCcCHHHHHHHHHHHHhhh
Confidence            99999999999999886544


No 67 
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=9.9e-43  Score=303.36  Aligned_cols=223  Identities=18%  Similarity=0.178  Sum_probs=178.1

Q ss_pred             CceEEEEeeccc--CchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSV--HESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||||++...  .......+..|+..+..+ +||||++++++|...+..++||||+ +++|.+++.....   .+++.
T Consensus        82 ~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~---~l~~~  157 (311)
T 3p1a_A           82 GRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGA---SLPEA  157 (311)
T ss_dssp             SCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHHCS---CCCHH
T ss_pred             CeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-CCCHHHHHHhcCC---CCCHH
Confidence            678999998643  334455667777777766 9999999999999999999999999 7799999987653   58999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCC
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .++.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++.....  ........||+.|+|||++.+ .
T Consensus       158 ~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~--~~~~~~~~gt~~y~aPE~~~~-~  231 (311)
T 3p1a_A          158 QVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGT--AGAGEVQEGDPRYMAPELLQG-S  231 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC--------CCCCCGGGCCGGGGGT-C
T ss_pred             HHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeeccc--CCCCcccCCCccccCHhHhcC-C
Confidence            99999999999999999999   99999999999999999999999999765432  223344568999999999876 7


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      ++.++|||||||++|+|++|..++......................+..+.+||.+||+.||++|||+.|++++.+
T Consensus       232 ~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~  307 (311)
T 3p1a_A          232 YGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPV  307 (311)
T ss_dssp             CSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCcc
Confidence            8999999999999999999977665443322221111112223334677999999999999999999999997643


No 68 
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=8e-43  Score=300.07  Aligned_cols=233  Identities=21%  Similarity=0.314  Sum_probs=193.5

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      |+.||+|+++. +....+.+.+|+++++.++||||+++++++...+..++||||+.+|+|.+++......  .+++..++
T Consensus        38 ~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~  114 (288)
T 3kfa_A           38 SLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ--EVSAVVLL  114 (288)
T ss_dssp             TEEEEEEEECS-CSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTT--TSCHHHHH
T ss_pred             CEEEEEEecCc-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccC--CccHhHHH
Confidence            56799999875 3445778999999999999999999999999999999999999999999999875432  58999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTE  161 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~  161 (290)
                      .++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++...............+++.|+|||++.+..++.
T Consensus       115 ~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  191 (288)
T 3kfa_A          115 YMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI  191 (288)
T ss_dssp             HHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCH
T ss_pred             HHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCc
Confidence            99999999999999999   999999999999999999999999998765544444455566788999999999999999


Q ss_pred             cccchhhHHHHHHHhc-CCCCcccchhhhh--hhHHHhhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhHh
Q 044846          162 KSDVYSFSVVLVELNW-TKPIHLVDVEENR--SLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRA  238 (290)
Q Consensus       162 ~~DiwS~G~il~~l~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~  238 (290)
                      ++||||||+++|+|++ |.+|+........  ..........+...+..+.+|+.+||+.||.+|||+.++++.|+.+..
T Consensus       192 ~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~  271 (288)
T 3kfa_A          192 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  271 (288)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence            9999999999999998 7777654322111  111111122233456779999999999999999999999999988876


Q ss_pred             hh
Q 044846          239 SI  240 (290)
Q Consensus       239 ~~  240 (290)
                      ..
T Consensus       272 ~~  273 (288)
T 3kfa_A          272 ES  273 (288)
T ss_dssp             HH
T ss_pred             hc
Confidence            53


No 69 
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=7.6e-43  Score=299.42  Aligned_cols=229  Identities=21%  Similarity=0.313  Sum_probs=183.0

Q ss_pred             eEEEEeeccc-CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHHH
Q 044846            4 LWLLKKSKSV-HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLR   82 (290)
Q Consensus         4 ~~avK~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~   82 (290)
                      .||+|+++.. .....+.+.+|+.+++.++||||+++++++.. +..++||||+++++|.+++.....   .+++..+..
T Consensus        42 ~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~  117 (281)
T 3cc6_A           42 NVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKN---SLKVLTLVL  117 (281)
T ss_dssp             EEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHHHHHTT---TCCHHHHHH
T ss_pred             eEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecCCCCCHHHHHHhccc---cCCHHHHHH
Confidence            5899998754 44567789999999999999999999999865 457899999999999999987543   588999999


Q ss_pred             HHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCCCCc
Q 044846           83 ITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEK  162 (290)
Q Consensus        83 ~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~  162 (290)
                      ++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++...............+++.|+|||++.+..++.+
T Consensus       118 ~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  194 (281)
T 3cc6_A          118 YSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA  194 (281)
T ss_dssp             HHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHH
T ss_pred             HHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCch
Confidence            9999999999999999   9999999999999999999999999987544332222334556788999999998899999


Q ss_pred             ccchhhHHHHHHHhc-CCCCcccchhhhh--hhHHHhhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhHhh
Q 044846          163 SDVYSFSVVLVELNW-TKPIHLVDVEENR--SLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRAS  239 (290)
Q Consensus       163 ~DiwS~G~il~~l~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~~  239 (290)
                      +||||||+++|+|++ |..|+........  ..........+...+..+.+++.+||+.||++|||+.|++++|+.+...
T Consensus       195 ~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~  274 (281)
T 3cc6_A          195 SDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM  274 (281)
T ss_dssp             HHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence            999999999999997 8888753322111  1111111122233556799999999999999999999999999988653


No 70 
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=1.1e-42  Score=302.62  Aligned_cols=236  Identities=22%  Similarity=0.312  Sum_probs=191.5

Q ss_pred             CceEEEEeecccC-chhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCC--------
Q 044846            2 EELWLLKKSKSVH-ESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDD--------   71 (290)
Q Consensus         2 ~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~--------   71 (290)
                      ++.||+|+++... ....+.+.+|+++++.+ +||||+++++++...+..++||||+++|+|.+++......        
T Consensus        53 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~  132 (313)
T 1t46_A           53 AMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP  132 (313)
T ss_dssp             EEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC-------
T ss_pred             hhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccc
Confidence            4679999997543 34567899999999999 9999999999999999999999999999999999875421        


Q ss_pred             ------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCc-eeecccee
Q 044846           72 ------QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT-HLTTQVKV  144 (290)
Q Consensus        72 ------~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~g  144 (290)
                            ...+++..++.++.||+.||.|||+++   |+||||||+||+++.++.+||+|||++........ .......+
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  209 (313)
T 1t46_A          133 AIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL  209 (313)
T ss_dssp             -------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEE
T ss_pred             cccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCC
Confidence                  124899999999999999999999999   99999999999999999999999999875443322 22334567


Q ss_pred             cccccCccccccCCCCCcccchhhHHHHHHHhc-CCCCcccchhhhhh---hHHHhhhhhhHHHHHHHHHHHHHhhccCC
Q 044846          145 TFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNW-TKPIHLVDVEENRS---LAAYFSKEAEKEEVITFAMVAKRCLNLNG  220 (290)
Q Consensus       145 ~~~y~aPE~~~~~~~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~cl~~dp  220 (290)
                      ++.|+|||++.+..++.++||||||+++|+|++ |..|+.........   .........+...+..+.+++.+||+.||
T Consensus       210 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp  289 (313)
T 1t46_A          210 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADP  289 (313)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             cceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCc
Confidence            889999999999999999999999999999998 88777543221111   11111112223456779999999999999


Q ss_pred             CCCCCHHHHHHHHHhhHhhh
Q 044846          221 KKQPTMKEVTLELAGIRASI  240 (290)
Q Consensus       221 ~~Rps~~el~~~l~~~~~~~  240 (290)
                      .+|||+.|++++|+.+....
T Consensus       290 ~~Rps~~ell~~L~~~~~~~  309 (313)
T 1t46_A          290 LKRPTFKQIVQLIEKQISES  309 (313)
T ss_dssp             GGSCCHHHHHHHHHHHHHHT
T ss_pred             hhCcCHHHHHHHHHHHHHHh
Confidence            99999999999999886543


No 71 
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=3e-42  Score=302.60  Aligned_cols=230  Identities=13%  Similarity=0.089  Sum_probs=186.8

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      |+.||||++.....  .+.+.+|+++++.| +||||+++++++...+..++||||+ +++|.+++.....   .+++..+
T Consensus        34 ~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~---~~~~~~~  107 (330)
T 2izr_A           34 NEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDR---TFSLKTV  107 (330)
T ss_dssp             TEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT---CCCHHHH
T ss_pred             CcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCC---CCCHHHH
Confidence            67899999875332  34588999999999 9999999999999999999999999 9999999986532   5899999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCc-----EEEeccccccccccCCce------eeccceeccccc
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ-----AKISDFRTFKSRAIDRTH------LTTQVKVTFGYV  149 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~-----~kl~dfg~~~~~~~~~~~------~~~~~~g~~~y~  149 (290)
                      +.++.|++.||.|||+++   |+||||||+|||++.++.     +||+|||+++........      ......||+.|+
T Consensus       108 ~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~  184 (330)
T 2izr_A          108 LMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYM  184 (330)
T ss_dssp             HHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTC
T ss_pred             HHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCcccc
Confidence            999999999999999999   999999999999998887     999999998754322211      123567899999


Q ss_pred             CccccccCCCCCcccchhhHHHHHHHhcCCCCcccchhh--hhhhHHHhh--hhhh-----HHHHHHHHHHHHHhhccCC
Q 044846          150 DPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEE--NRSLAAYFS--KEAE-----KEEVITFAMVAKRCLNLNG  220 (290)
Q Consensus       150 aPE~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~--~~~~~~~~~--~~~~-----~~~~~~~~~li~~cl~~dp  220 (290)
                      |||++.+..++.++|||||||++|+|++|..||......  .........  ...+     ...+ .+.+++.+||+.||
T Consensus       185 aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p  263 (330)
T 2izr_A          185 SINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDF  263 (330)
T ss_dssp             CHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCT
T ss_pred             ChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCC
Confidence            999999999999999999999999999999988653211  111111100  0011     1123 89999999999999


Q ss_pred             CCCCCHHHHHHHHHhhHhhhC
Q 044846          221 KKQPTMKEVTLELAGIRASIG  241 (290)
Q Consensus       221 ~~Rps~~el~~~l~~~~~~~~  241 (290)
                      .+||++++|.+.|+.+....+
T Consensus       264 ~~RP~~~~l~~~l~~~~~~~~  284 (330)
T 2izr_A          264 FEKPDYDYLRKLFTDLFDRKG  284 (330)
T ss_dssp             TCCCCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCHHHHHHHHHHHHHHcC
Confidence            999999999999988876553


No 72 
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=5.6e-43  Score=297.67  Aligned_cols=229  Identities=23%  Similarity=0.337  Sum_probs=187.4

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      ++.||+|+++.... ..+.+.+|+++++.++||||+++++++...+..++||||+++++|.+++.....   .+++..+.
T Consensus        32 ~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~  107 (267)
T 3t9t_A           32 KDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRG---LFAAETLL  107 (267)
T ss_dssp             TEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTT---CCCHHHHH
T ss_pred             CCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcc---cCCHHHHH
Confidence            46799999976443 346799999999999999999999999999999999999999999999986542   58899999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTE  161 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~  161 (290)
                      .++.|++.||.|||+++   ++||||||+||+++.++.+||+|||++...............++..|+|||++.+..++.
T Consensus       108 ~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  184 (267)
T 3t9t_A          108 GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS  184 (267)
T ss_dssp             HHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCH
T ss_pred             HHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEcccccccccccccccccccccccccccChhhhcCCCccc
Confidence            99999999999999999   999999999999999999999999997654322222223345677899999999889999


Q ss_pred             cccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHh---hhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhH
Q 044846          162 KSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYF---SKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIR  237 (290)
Q Consensus       162 ~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~  237 (290)
                      ++||||||+++|+|++ |..|+....... ......   ....+...+..+.+++.+||+.||++|||+.+++++|+.+.
T Consensus       185 ~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~  263 (267)
T 3t9t_A          185 KSDVWSFGVLMWEVFSEGKIPYENRSNSE-VVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA  263 (267)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhchhhhHHHHHHHhccCCCCCCCCCHHH-HHHHHhcCCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999998 777775432221 111111   11122334667899999999999999999999999999886


Q ss_pred             h
Q 044846          238 A  238 (290)
Q Consensus       238 ~  238 (290)
                      .
T Consensus       264 ~  264 (267)
T 3t9t_A          264 E  264 (267)
T ss_dssp             H
T ss_pred             h
Confidence            5


No 73 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=8.2e-43  Score=308.76  Aligned_cols=222  Identities=16%  Similarity=0.168  Sum_probs=186.5

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|+++..   .....+.+.+|+.+++.++||||+++++++.+.+..|+||||+++|+|.+++....    .+++.
T Consensus        66 ~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----~~~~~  141 (350)
T 1rdq_E           66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEP  141 (350)
T ss_dssp             CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHC----CCCHH
T ss_pred             CCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcC----CCCHH
Confidence            678999998642   23456788999999999999999999999999999999999999999999998765    58999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCC
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .++.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++.....    .....||+.|+|||++.+..
T Consensus       142 ~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~  214 (350)
T 1rdq_E          142 HARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEALAPEIILSKG  214 (350)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC----BCCCEECGGGCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCC----cccccCCccccCHHHhcCCC
Confidence            99999999999999999999   999999999999999999999999998754321    23467899999999999999


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh--hhhhHHHHHHHHHHHHHhhccCCCCCCC-----HHHHHH
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS--KEAEKEEVITFAMVAKRCLNLNGKKQPT-----MKEVTL  231 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rps-----~~el~~  231 (290)
                      ++.++|||||||++|+|++|.+||....... .......  ...+...+..+.+||.+||+.||.+||+     ++|+++
T Consensus       215 ~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ-IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCCcCCEecccHhHhHHhhCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence            9999999999999999999999886543221 1111111  1122345677999999999999999998     899987


Q ss_pred             HHHh
Q 044846          232 ELAG  235 (290)
Q Consensus       232 ~l~~  235 (290)
                      |.+.
T Consensus       294 h~~f  297 (350)
T 1rdq_E          294 HKWF  297 (350)
T ss_dssp             SGGG
T ss_pred             CcCc
Confidence            7543


No 74 
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=1.2e-42  Score=300.67  Aligned_cols=224  Identities=22%  Similarity=0.300  Sum_probs=176.5

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHh--cCCCceeeEEeEEEeC----CcceEEEEeCCCCCHHHHHhhcCCCCCCC
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQ--INHRNVVKILGCCLET----EVPLLVYEFIPNGSLYQYIHEQTDDQLPI   75 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~--l~Hpniv~~~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~   75 (290)
                      |+.||||++..   .....+..|.+++..  ++||||+++++++...    ...++||||+++|+|.++++..     .+
T Consensus        31 ~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~  102 (301)
T 3q4u_A           31 GENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT-----TL  102 (301)
T ss_dssp             TEEEEEEEECG---GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTC-----CB
T ss_pred             CEEEEEEEecc---ccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhhc-----cc
Confidence            67899999864   344566778888777  7999999999997653    4579999999999999999643     48


Q ss_pred             CHHHHHHHHHHHHHHHHHHh--------hCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCcee---ecccee
Q 044846           76 TWEMRLRITVEVSRVLSYLH--------SVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL---TTQVKV  144 (290)
Q Consensus        76 ~~~~~~~~~~~i~~~l~ylH--------~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~g  144 (290)
                      ++..++.++.|++.||.|||        +.+   |+||||||+|||++.++.+||+|||+++.........   .....|
T Consensus       103 ~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g  179 (301)
T 3q4u_A          103 DTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVG  179 (301)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEeeCCCeeeccccccccccccccccc
Confidence            99999999999999999999        777   9999999999999999999999999986543332222   233478


Q ss_pred             cccccCccccccC------CCCCcccchhhHHHHHHHhcC----------CCCcccchhhh---hhhHHHhh--------
Q 044846          145 TFGYVDPKYFRSS------QFTEKSDVYSFSVVLVELNWT----------KPIHLVDVEEN---RSLAAYFS--------  197 (290)
Q Consensus       145 ~~~y~aPE~~~~~------~~~~~~DiwS~G~il~~l~~~----------~~~~~~~~~~~---~~~~~~~~--------  197 (290)
                      |+.|+|||++.+.      .++.++|||||||++|+|++|          .+||.......   ........        
T Consensus       180 t~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (301)
T 3q4u_A          180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNI  259 (301)
T ss_dssp             CGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCC
T ss_pred             ccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCC
Confidence            9999999999876      345689999999999999999          66664322111   11111100        


Q ss_pred             --hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 044846          198 --KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGI  236 (290)
Q Consensus       198 --~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~  236 (290)
                        .......+..+.+|+.+||+.||++|||+.++++.|+.+
T Consensus       260 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          260 PNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             CGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             ChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence              112234667899999999999999999999999999875


No 75 
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=7e-43  Score=297.86  Aligned_cols=227  Identities=23%  Similarity=0.358  Sum_probs=175.9

Q ss_pred             CceEEEEeecccC----chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCH
Q 044846            2 EELWLLKKSKSVH----ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW   77 (290)
Q Consensus         2 ~~~~avK~~~~~~----~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~   77 (290)
                      |+.||+|+++...    ....+.+.+|+++++.++||||+++++++...+..++||||+++++|.+++...     .+++
T Consensus        30 ~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-----~~~~  104 (271)
T 3dtc_A           30 GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK-----RIPP  104 (271)
T ss_dssp             TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTEEHHHHHTSS-----CCCH
T ss_pred             CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhhcC-----CCCH
Confidence            5779999986432    233578899999999999999999999999999999999999999999998643     5899


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEecc--------CCcEEEeccccccccccCCceeeccceeccccc
Q 044846           78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD--------KYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYV  149 (290)
Q Consensus        78 ~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~--------~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~  149 (290)
                      ..++.++.|++.||.|||+++..+|+||||||+||+++.        ++.+||+|||++......   ......|++.|+
T Consensus       105 ~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~~y~  181 (271)
T 3dtc_A          105 DILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT---TKMSAAGAYAWM  181 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC----------------CCGGGS
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccc---cccCCCCcccee
Confidence            999999999999999999988555889999999999986        678999999997643321   122456899999


Q ss_pred             CccccccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh---hhhhHHHHHHHHHHHHHhhccCCCCCCCH
Q 044846          150 DPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS---KEAEKEEVITFAMVAKRCLNLNGKKQPTM  226 (290)
Q Consensus       150 aPE~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~dp~~Rps~  226 (290)
                      |||++.+..++.++||||||+++|+|++|..||...............   ...+...+..+.+++.+||+.||.+|||+
T Consensus       182 aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  261 (271)
T 3dtc_A          182 APEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSF  261 (271)
T ss_dssp             CHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCH
Confidence            999999999999999999999999999999988654332222111111   12223455679999999999999999999


Q ss_pred             HHHHHHHHhh
Q 044846          227 KEVTLELAGI  236 (290)
Q Consensus       227 ~el~~~l~~~  236 (290)
                      .|++++|+.+
T Consensus       262 ~e~l~~L~~l  271 (271)
T 3dtc_A          262 TNILDQLTTI  271 (271)
T ss_dssp             HHHHHHHHC-
T ss_pred             HHHHHHHhcC
Confidence            9999999753


No 76 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=1.4e-42  Score=299.51  Aligned_cols=225  Identities=18%  Similarity=0.244  Sum_probs=180.4

Q ss_pred             CceEEEEeeccc--CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKSV--HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.||+|+++..  .....+.+.+|+.+++.++||||+++++++...+..++||||+. |++.+.+.....   .+++..
T Consensus        27 ~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~---~l~~~~  102 (292)
T 3o0g_A           27 HEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD-QDLKKYFDSCNG---DLDPEI  102 (292)
T ss_dssp             CCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHTTT---CCCHHH
T ss_pred             CceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCC-CCHHHHHHhCCC---CCCHHH
Confidence            678999998643  33445788999999999999999999999999999999999996 477777765432   589999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCC-
Q 044846           80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ-  158 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-  158 (290)
                      ++.++.|++.||.|||+++   |+||||||+||+++.++.+||+|||+++..... ........||+.|+|||++.+.. 
T Consensus       103 ~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~  178 (292)
T 3o0g_A          103 VKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIP-VRCYSAEVVTLWYRPPDVLFGAKL  178 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSC-CSCCCSCCSCGGGCCHHHHTTCSC
T ss_pred             HHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCc-cccccCCccccCCcChHHHcCCCC
Confidence            9999999999999999999   999999999999999999999999998654322 22234456799999999998765 


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh-------------------------------hhhHHHHHH
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK-------------------------------EAEKEEVIT  207 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~  207 (290)
                      ++.++|||||||++|+|++|..|+.........+......                               ......+..
T Consensus       179 ~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (292)
T 3o0g_A          179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNAT  258 (292)
T ss_dssp             CCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHH
T ss_pred             cCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChH
Confidence            7999999999999999998777765443332222221110                               001124567


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          208 FAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       208 ~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      +.+||.+||+.||++|||++|+++|-+
T Consensus       259 ~~~li~~~L~~dP~~R~t~~e~l~hp~  285 (292)
T 3o0g_A          259 GRDLLQNLLKCNPVQRISAEEALQHPY  285 (292)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             HHHHHHHHhccChhhCCCHHHHhcCcc
Confidence            889999999999999999999998754


No 77 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=8.7e-43  Score=311.79  Aligned_cols=223  Identities=19%  Similarity=0.234  Sum_probs=183.2

Q ss_pred             CceEEEEeecc---cCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKS---VHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~---~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|++..   ......+.+.+|+++|+.++|||||+++++|...+..|+||||+.||+|..++....    .+++.
T Consensus        40 ~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----~l~~~  115 (384)
T 4fr4_A           40 KKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNV----HFKEE  115 (384)
T ss_dssp             CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHTTC----CCCHH
T ss_pred             CCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcC----CCCHH
Confidence            67899999863   234456789999999999999999999999999999999999999999999998654    58999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCcccccc--
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRS--  156 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--  156 (290)
                      .++.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++....  ........||+.|+|||++.+  
T Consensus       116 ~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~--~~~~~~~~gt~~Y~aPE~~~~~~  190 (384)
T 4fr4_A          116 TVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--ETQITTMAGTKPYMAPEMFSSRK  190 (384)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCT--TCCBCCCCSCGGGCCGGGTCCCS
T ss_pred             HHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccC--CCceeccCCCccccCCeeeccCC
Confidence            99999999999999999999   99999999999999999999999999875432  223345679999999999874  


Q ss_pred             -CCCCCcccchhhHHHHHHHhcCCCCcccchhh--hhhhHHH--hhhhhhHHHHHHHHHHHHHhhccCCCCCCC-HHHHH
Q 044846          157 -SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEE--NRSLAAY--FSKEAEKEEVITFAMVAKRCLNLNGKKQPT-MKEVT  230 (290)
Q Consensus       157 -~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~dp~~Rps-~~el~  230 (290)
                       ..++.++|||||||++|+|++|.+||......  .......  .....+...+..+.+||.+||+.||.+||+ +++++
T Consensus       191 ~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~  270 (384)
T 4fr4_A          191 GAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQ  270 (384)
T ss_dssp             SCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred             CCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence             45889999999999999999999998643221  1111111  111223345678999999999999999998 77777


Q ss_pred             HHH
Q 044846          231 LEL  233 (290)
Q Consensus       231 ~~l  233 (290)
                      .+.
T Consensus       271 ~hp  273 (384)
T 4fr4_A          271 NFP  273 (384)
T ss_dssp             TSG
T ss_pred             cCh
Confidence            653


No 78 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=1.4e-42  Score=302.54  Aligned_cols=225  Identities=17%  Similarity=0.224  Sum_probs=177.9

Q ss_pred             CceEEEEeeccc--CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKSV--HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.||+|+++..  .....+.+.+|+++++.++||||+++++++...+..++||||++ |+|.+++.....   .+++..
T Consensus        45 ~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~---~~~~~~  120 (311)
T 3niz_A           45 GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKT---GLQDSQ  120 (311)
T ss_dssp             SCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS-EEHHHHHHTCTT---CCCHHH
T ss_pred             CCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC-CCHHHHHHhccC---CCCHHH
Confidence            678999998743  23345778999999999999999999999999999999999996 589998876543   589999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCcccccc-CC
Q 044846           80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRS-SQ  158 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~  158 (290)
                      +..++.|++.||.|||+++   |+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+ ..
T Consensus       121 ~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~  196 (311)
T 3niz_A          121 IKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPV-RSYTHEVVTLWYRAPDVLMGSKK  196 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSCC-C---CCCCCCTTCCHHHHTTCCS
T ss_pred             HHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCCc-ccccCCcccCCcCCHHHhcCCCC
Confidence            9999999999999999999   9999999999999999999999999987543221 22334567999999999876 56


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhh--hHHHhhh-----------------------------hhhHHHHHH
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRS--LAAYFSK-----------------------------EAEKEEVIT  207 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~--~~~~~~~-----------------------------~~~~~~~~~  207 (290)
                      ++.++|||||||++|+|++|.+||.........  .......                             ......+.+
T Consensus       197 ~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (311)
T 3niz_A          197 YSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQE  276 (311)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHH
T ss_pred             CCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHH
Confidence            899999999999999999999888643322111  1100000                             001123457


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          208 FAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       208 ~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      +.+||.+||+.||++|||+.|+++|.+
T Consensus       277 ~~~li~~~L~~dP~~Rpt~~ell~hp~  303 (311)
T 3niz_A          277 GIDLLSNMLCFDPNKRISARDAMNHPY  303 (311)
T ss_dssp             HHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred             HHHHHHHHcCCChhHCCCHHHHhcCcc
Confidence            889999999999999999999998744


No 79 
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=8.1e-43  Score=305.98  Aligned_cols=230  Identities=20%  Similarity=0.317  Sum_probs=181.5

Q ss_pred             eEEEEeecc-cCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHHH
Q 044846            4 LWLLKKSKS-VHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLR   82 (290)
Q Consensus         4 ~~avK~~~~-~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~   82 (290)
                      .||+|+++. ......+.+.+|+.+++.++||||++++++|.... .++|+||+.+|+|.+++.....   .+++..++.
T Consensus        46 ~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~~~~g~L~~~l~~~~~---~~~~~~~~~  121 (327)
T 3poz_A           46 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKD---NIGSQYLLN  121 (327)
T ss_dssp             EEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEECCTTCBHHHHHHHSTT---SCCHHHHHH
T ss_pred             EEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEecCCCcHHHHHHhcCC---CCCHHHHHH
Confidence            368888753 33455778999999999999999999999998765 7899999999999999987543   589999999


Q ss_pred             HHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCce-eeccceecccccCccccccCCCCC
Q 044846           83 ITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH-LTTQVKVTFGYVDPKYFRSSQFTE  161 (290)
Q Consensus        83 ~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~  161 (290)
                      ++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++........ ......+|..|+|||++.+..++.
T Consensus       122 ~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  198 (327)
T 3poz_A          122 WCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH  198 (327)
T ss_dssp             HHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCH
T ss_pred             HHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCc
Confidence            9999999999999999   999999999999999999999999998754332222 223345678999999999999999


Q ss_pred             cccchhhHHHHHHHhc-CCCCcccchhhhh--hhHHHhhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhHh
Q 044846          162 KSDVYSFSVVLVELNW-TKPIHLVDVEENR--SLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRA  238 (290)
Q Consensus       162 ~~DiwS~G~il~~l~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~  238 (290)
                      ++|||||||++|+|++ |..|+........  .+........+...+..+.+++.+||+.||.+|||+.+++++|+.+..
T Consensus       199 ~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          199 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred             hhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            9999999999999998 8887754322211  111111112233456679999999999999999999999999998865


Q ss_pred             hh
Q 044846          239 SI  240 (290)
Q Consensus       239 ~~  240 (290)
                      ..
T Consensus       279 ~~  280 (327)
T 3poz_A          279 DP  280 (327)
T ss_dssp             SH
T ss_pred             hh
Confidence            43


No 80 
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=8.1e-42  Score=296.52  Aligned_cols=232  Identities=32%  Similarity=0.485  Sum_probs=187.6

Q ss_pred             CceEEEEeeccc----CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCH
Q 044846            2 EELWLLKKSKSV----HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW   77 (290)
Q Consensus         2 ~~~~avK~~~~~----~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~   77 (290)
                      |+.||+|++...    .....+.+.+|+++++.++||||+++++++...+..++||||+++|+|.+++...... ..+++
T Consensus        54 ~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~  132 (307)
T 2nru_A           54 NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT-PPLSW  132 (307)
T ss_dssp             SCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGC-CCCCH
T ss_pred             CceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCC-CCCCH
Confidence            578999998642    2345678999999999999999999999999999999999999999999999754322 25899


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCC-ceeeccceecccccCcccccc
Q 044846           78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDR-THLTTQVKVTFGYVDPKYFRS  156 (290)
Q Consensus        78 ~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~  156 (290)
                      ..++.++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++....... ........|++.|+|||++.+
T Consensus       133 ~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~  209 (307)
T 2nru_A          133 HMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG  209 (307)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC
Confidence            999999999999999999999   9999999999999999999999999986543222 222334578999999998865


Q ss_pred             CCCCCcccchhhHHHHHHHhcCCCCcccchhhhh--hhH-----------HHhh---hhhhHHHHHHHHHHHHHhhccCC
Q 044846          157 SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENR--SLA-----------AYFS---KEAEKEEVITFAMVAKRCLNLNG  220 (290)
Q Consensus       157 ~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~--~~~-----------~~~~---~~~~~~~~~~~~~li~~cl~~dp  220 (290)
                       .++.++||||||+++|+|++|.+|+........  .+.           ....   .......+..+.+++.+||+.||
T Consensus       210 -~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p  288 (307)
T 2nru_A          210 -EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKK  288 (307)
T ss_dssp             -EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSST
T ss_pred             -CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCc
Confidence             478899999999999999999988864322110  000           0000   11234566789999999999999


Q ss_pred             CCCCCHHHHHHHHHhhHh
Q 044846          221 KKQPTMKEVTLELAGIRA  238 (290)
Q Consensus       221 ~~Rps~~el~~~l~~~~~  238 (290)
                      .+|||+.+++++|+.+..
T Consensus       289 ~~Rps~~~l~~~L~~l~~  306 (307)
T 2nru_A          289 NKRPDIKKVQQLLQEMTA  306 (307)
T ss_dssp             TTSCCHHHHHHHHHHHC-
T ss_pred             ccCcCHHHHHHHHHHHhc
Confidence            999999999999988753


No 81 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=3.6e-43  Score=310.34  Aligned_cols=224  Identities=20%  Similarity=0.197  Sum_probs=185.2

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW   77 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~   77 (290)
                      |+.||+|+++..   .....+.+..|..++..+ +||||+++++++.+.+..|+||||++||+|.+++....    .+++
T Consensus        42 ~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~----~~~~  117 (345)
T 1xjd_A           42 NQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH----KFDL  117 (345)
T ss_dssp             TEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS----SCCH
T ss_pred             CCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC----CCCH
Confidence            678999998742   234567788999999987 99999999999999999999999999999999998765    5899


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccC
Q 044846           78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSS  157 (290)
Q Consensus        78 ~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  157 (290)
                      ..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++..... ........||+.|+|||++.+.
T Consensus       118 ~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~  193 (345)
T 1xjd_A          118 SRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG-DAKTNTFCGTPDYIAPEILLGQ  193 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT-TCCBCCCCSCGGGCCHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhhcccC-CCcccCCCCCcccCChhhhcCC
Confidence            999999999999999999999   999999999999999999999999998753322 1223456789999999999999


Q ss_pred             CCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh--hhhhHHHHHHHHHHHHHhhccCCCCCCCHH-HHHHHHH
Q 044846          158 QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS--KEAEKEEVITFAMVAKRCLNLNGKKQPTMK-EVTLELA  234 (290)
Q Consensus       158 ~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rps~~-el~~~l~  234 (290)
                      .++.++|+|||||++|+|++|.+||....... .......  ...+...+..+.+||.+||+.||.+||++. ++++|.+
T Consensus       194 ~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~  272 (345)
T 1xjd_A          194 KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE-LFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPL  272 (345)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGG
T ss_pred             CCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH-HHHHHHhCCCCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCcc
Confidence            99999999999999999999999886543221 1111111  112223467799999999999999999997 8876643


No 82 
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=1e-42  Score=304.08  Aligned_cols=231  Identities=22%  Similarity=0.313  Sum_probs=188.2

Q ss_pred             CceEEEEeecccC-chhHHHHHHHHHHHHhcCCCceeeEEeEEEeC--CcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSVH-ESNVEQFINEVVILSQINHRNVVKILGCCLET--EVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|+++... ....+.+.+|+++++.++||||+++++++...  ...++||||+++|+|.+++...     .+++.
T Consensus        60 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~  134 (318)
T 3lxp_A           60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH-----SIGLA  134 (318)
T ss_dssp             CEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGS-----CCCHH
T ss_pred             CcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhC-----CCCHH
Confidence            5679999997543 45577899999999999999999999999884  5789999999999999999764     38899


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCce--eeccceecccccCcccccc
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH--LTTQVKVTFGYVDPKYFRS  156 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~  156 (290)
                      .++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++.........  ......++..|+|||++.+
T Consensus       135 ~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  211 (318)
T 3lxp_A          135 QLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE  211 (318)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcC
Confidence            99999999999999999999   999999999999999999999999998765433221  2234557888999999998


Q ss_pred             CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhh-------------HHHh----hhhhhHHHHHHHHHHHHHhhccC
Q 044846          157 SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSL-------------AAYF----SKEAEKEEVITFAMVAKRCLNLN  219 (290)
Q Consensus       157 ~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~-------------~~~~----~~~~~~~~~~~~~~li~~cl~~d  219 (290)
                      ..++.++||||||+++|+|++|..|+..........             ....    ....+...+..+.+||.+||+.|
T Consensus       212 ~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  291 (318)
T 3lxp_A          212 YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETE  291 (318)
T ss_dssp             CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCC
Confidence            889999999999999999999998876443221110             0000    01122334567999999999999


Q ss_pred             CCCCCCHHHHHHHHHhhHhhh
Q 044846          220 GKKQPTMKEVTLELAGIRASI  240 (290)
Q Consensus       220 p~~Rps~~el~~~l~~~~~~~  240 (290)
                      |.+|||+.|+++.|+.+....
T Consensus       292 P~~Rps~~ell~~L~~l~~~~  312 (318)
T 3lxp_A          292 ASFRPTFENLIPILKTVHEKY  312 (318)
T ss_dssp             GGGSCCHHHHHHHHHHHHHHH
T ss_pred             cccCcCHHHHHHHHHHHHHhh
Confidence            999999999999999887655


No 83 
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=3e-42  Score=298.42  Aligned_cols=230  Identities=23%  Similarity=0.332  Sum_probs=184.4

Q ss_pred             CceEEEEeeccc-CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeC--CcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSV-HESNVEQFINEVVILSQINHRNVVKILGCCLET--EVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|+++.. .....+.+.+|+++++.++||||+++++++...  +..++||||+++|+|.+++.....   .+++.
T Consensus        50 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~  126 (302)
T 4e5w_A           50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN---KINLK  126 (302)
T ss_dssp             SEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTT---TCCHH
T ss_pred             CeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccc---cCCHH
Confidence            678999998743 344567899999999999999999999999876  678999999999999999976543   58999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCc--eeeccceecccccCcccccc
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT--HLTTQVKVTFGYVDPKYFRS  156 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~  156 (290)
                      .++.++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++........  .......+|..|+|||++.+
T Consensus       127 ~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  203 (302)
T 4e5w_A          127 QQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQ  203 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecC
Confidence            99999999999999999999   99999999999999999999999999876543322  12234567888999999999


Q ss_pred             CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhh-------------hHHHh----hhhhhHHHHHHHHHHHHHhhccC
Q 044846          157 SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRS-------------LAAYF----SKEAEKEEVITFAMVAKRCLNLN  219 (290)
Q Consensus       157 ~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~-------------~~~~~----~~~~~~~~~~~~~~li~~cl~~d  219 (290)
                      ..++.++||||||+++|+|++|..++.........             .....    ....+...+..+.+|+.+||+.|
T Consensus       204 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  283 (302)
T 4e5w_A          204 SKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQ  283 (302)
T ss_dssp             CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSS
T ss_pred             CCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            88999999999999999999998875433211110             00000    01112234567999999999999


Q ss_pred             CCCCCCHHHHHHHHHhhH
Q 044846          220 GKKQPTMKEVTLELAGIR  237 (290)
Q Consensus       220 p~~Rps~~el~~~l~~~~  237 (290)
                      |.+|||+.++++.|+.+.
T Consensus       284 p~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          284 PSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             GGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHh
Confidence            999999999999998763


No 84 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=1.1e-42  Score=311.83  Aligned_cols=224  Identities=17%  Similarity=0.173  Sum_probs=186.7

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      |+.||+|++..........+.+|+.+|+.++||||+++++++...+..++||||+.+|+|.+++.....   .+++..+.
T Consensus        76 ~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~---~l~~~~~~  152 (387)
T 1kob_A           76 GRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY---KMSEAEVI  152 (387)
T ss_dssp             CCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTC---CBCHHHHH
T ss_pred             CCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcC---CCCHHHHH
Confidence            678999999876666677899999999999999999999999999999999999999999999975432   58999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEecc--CCcEEEeccccccccccCCceeeccceecccccCccccccCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD--KYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQF  159 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~  159 (290)
                      .++.||+.||.|||+++   |+||||||+|||++.  .+.+||+|||+++.....  .......||+.|+|||++.+..+
T Consensus       153 ~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~  227 (387)
T 1kob_A          153 NYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD--EIVKVTTATAEFAAPEIVDREPV  227 (387)
T ss_dssp             HHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT--SCEEEECSSGGGCCHHHHTTCCB
T ss_pred             HHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCC--cceeeeccCCCccCchhccCCCC
Confidence            99999999999999999   999999999999974  577999999998754322  22234568999999999999999


Q ss_pred             CCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q 044846          160 TEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLEL  233 (290)
Q Consensus       160 ~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l  233 (290)
                      +.++|||||||++|+|++|.+||........ +.....      .......+..+.+||.+||+.||.+|||+.|++++.
T Consensus       228 ~~~~DiwSlG~il~elltg~~Pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp  306 (387)
T 1kob_A          228 GFYTDMWAIGVLGYVLLSGLSPFAGEDDLET-LQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHP  306 (387)
T ss_dssp             CHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTST
T ss_pred             CCcccEeeHhHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCc
Confidence            9999999999999999999998865432211 111111      111223467799999999999999999999999885


Q ss_pred             H
Q 044846          234 A  234 (290)
Q Consensus       234 ~  234 (290)
                      +
T Consensus       307 ~  307 (387)
T 1kob_A          307 W  307 (387)
T ss_dssp             T
T ss_pred             c
Confidence            4


No 85 
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=6.9e-42  Score=295.46  Aligned_cols=230  Identities=12%  Similarity=0.032  Sum_probs=187.2

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      |+.||+|++....  ..+.+.+|+.+++.+ +|+|++++++++......++||||+ +++|.+++.....   .+++..+
T Consensus        35 ~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~---~~~~~~~  108 (298)
T 1csn_A           35 NQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGR---KFSVKTV  108 (298)
T ss_dssp             TEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT---CCCHHHH
T ss_pred             CcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCHHHHHHHhcc---CCCHHHH
Confidence            6789999986432  334678999999999 8999999999999999999999999 9999999986542   5899999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCc-----EEEeccccccccccCCce------eeccceeccccc
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ-----AKISDFRTFKSRAIDRTH------LTTQVKVTFGYV  149 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~-----~kl~dfg~~~~~~~~~~~------~~~~~~g~~~y~  149 (290)
                      ..++.||+.||.|||+++   |+||||||+||+++.++.     +||+|||+++........      ......||+.|+
T Consensus       109 ~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  185 (298)
T 1csn_A          109 AMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYM  185 (298)
T ss_dssp             HHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTC
T ss_pred             HHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccC
Confidence            999999999999999999   999999999999987776     999999998754432221      124466899999


Q ss_pred             CccccccCCCCCcccchhhHHHHHHHhcCCCCcccchh--hhhhhHHHhh----h---hhhHHHHHHHHHHHHHhhccCC
Q 044846          150 DPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVE--ENRSLAAYFS----K---EAEKEEVITFAMVAKRCLNLNG  220 (290)
Q Consensus       150 aPE~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~--~~~~~~~~~~----~---~~~~~~~~~~~~li~~cl~~dp  220 (290)
                      |||++.+..++.++||||||+++|+|++|..||.....  ..........    .   ......+..+.+++.+||+.||
T Consensus       186 aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp  265 (298)
T 1csn_A          186 SINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAF  265 (298)
T ss_dssp             CHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCT
T ss_pred             CchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCc
Confidence            99999999999999999999999999999998865321  1111111101    0   1111345689999999999999


Q ss_pred             CCCCCHHHHHHHHHhhHhhh
Q 044846          221 KKQPTMKEVTLELAGIRASI  240 (290)
Q Consensus       221 ~~Rps~~el~~~l~~~~~~~  240 (290)
                      ++|||+.++++.|+.+....
T Consensus       266 ~~RP~~~~l~~~l~~~~~~~  285 (298)
T 1csn_A          266 DATPDYDYLQGLFSKVLERL  285 (298)
T ss_dssp             TCCCCHHHHHHHHHHHHHHT
T ss_pred             ccCCCHHHHHHHHHHHHHhc
Confidence            99999999999999987755


No 86 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=2.2e-43  Score=318.26  Aligned_cols=225  Identities=19%  Similarity=0.213  Sum_probs=185.3

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|+++..   .....+.+.+|+.+++.++||||++++++|.+.+..|+|||||+||+|.+++...     .+++.
T Consensus        94 ~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~-----~~~e~  168 (410)
T 3v8s_A           94 RKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-----DVPEK  168 (410)
T ss_dssp             CCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHC-----CCCHH
T ss_pred             CcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHcC-----CCCHH
Confidence            678999998641   2233445889999999999999999999999999999999999999999999754     48899


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCC
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .++.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++..............||+.|+|||++.+..
T Consensus       169 ~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~  245 (410)
T 3v8s_A          169 WARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG  245 (410)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTT
T ss_pred             HHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccC
Confidence            99999999999999999999   999999999999999999999999998765433333345678999999999998765


Q ss_pred             ----CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------hhhhHHHHHHHHHHHHHhhccCCCC--CCCH
Q 044846          159 ----FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------KEAEKEEVITFAMVAKRCLNLNGKK--QPTM  226 (290)
Q Consensus       159 ----~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~--Rps~  226 (290)
                          ++.++|||||||++|+|++|.+||........ ......      .+.....+..+.+||.+||..+|.+  ||++
T Consensus       246 ~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~-~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~  324 (410)
T 3v8s_A          246 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT-YSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGV  324 (410)
T ss_dssp             TTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCH
T ss_pred             CCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhH-HHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCH
Confidence                78899999999999999999999875432211 111111      1111235678999999999999988  9999


Q ss_pred             HHHHHHHHh
Q 044846          227 KEVTLELAG  235 (290)
Q Consensus       227 ~el~~~l~~  235 (290)
                      +|+++|.+.
T Consensus       325 ~ei~~Hp~f  333 (410)
T 3v8s_A          325 EEIKRHLFF  333 (410)
T ss_dssp             HHHHTSGGG
T ss_pred             HHHhcCccc
Confidence            999998654


No 87 
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=4.8e-43  Score=320.41  Aligned_cols=229  Identities=20%  Similarity=0.288  Sum_probs=180.8

Q ss_pred             ceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHHH
Q 044846            3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLR   82 (290)
Q Consensus         3 ~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~   82 (290)
                      ..||||+++... ...+.|.+|+++|+.++||||+++++++.. +..++||||+++|+|.+++......  .+++..+..
T Consensus       209 ~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~~~~~--~~~~~~~~~  284 (452)
T 1fmk_A          209 TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGK--YLRLPQLVD  284 (452)
T ss_dssp             EEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHHHT--TCCHHHHHH
T ss_pred             ceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHhcCCC--CCCHHHHHH
Confidence            469999998643 346789999999999999999999999876 6789999999999999999754321  488999999


Q ss_pred             HHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCCCCc
Q 044846           83 ITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEK  162 (290)
Q Consensus        83 ~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~  162 (290)
                      ++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++..............++..|+|||++.+..++.+
T Consensus       285 i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  361 (452)
T 1fmk_A          285 MAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK  361 (452)
T ss_dssp             HHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHH
T ss_pred             HHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCcc
Confidence            9999999999999999   9999999999999999999999999987543322222233456788999999999999999


Q ss_pred             ccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHh---hhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhHh
Q 044846          163 SDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYF---SKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRA  238 (290)
Q Consensus       163 ~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~  238 (290)
                      +||||||+++|+|++ |..|+...... .......   ....+..++..+.+||.+||+.||++|||++++++.|+.+..
T Consensus       362 sDvwslG~~l~el~t~g~~P~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~  440 (452)
T 1fmk_A          362 SDVWSFGILLTELTTKGRVPYPGMVNR-EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  440 (452)
T ss_dssp             HHHHHHHHHHHHHHTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             ccHHhHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence            999999999999998 77776533221 1111111   112234456789999999999999999999999999988754


Q ss_pred             h
Q 044846          239 S  239 (290)
Q Consensus       239 ~  239 (290)
                      .
T Consensus       441 ~  441 (452)
T 1fmk_A          441 S  441 (452)
T ss_dssp             C
T ss_pred             c
Confidence            3


No 88 
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=6.2e-43  Score=304.52  Aligned_cols=228  Identities=20%  Similarity=0.239  Sum_probs=176.7

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcc----eEEEEeCCCCCHHHHHhhcCCCCCC
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQINHRNVVKILGCCLETEVP----LLVYEFIPNGSLYQYIHEQTDDQLP   74 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~----~lv~e~~~~g~L~~~l~~~~~~~~~   74 (290)
                      |+.||+|+++..   +......+.+|+++++.++||||+++++++......    |+||||+++|+|.+++....    .
T Consensus        37 ~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~----~  112 (311)
T 3ork_A           37 HRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG----P  112 (311)
T ss_dssp             TEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHC----S
T ss_pred             CceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcC----C
Confidence            678999999753   334466789999999999999999999999876544    99999999999999998765    5


Q ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCc--eeeccceecccccCcc
Q 044846           75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT--HLTTQVKVTFGYVDPK  152 (290)
Q Consensus        75 ~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~g~~~y~aPE  152 (290)
                      +++..++.++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++........  .......||+.|+|||
T Consensus       113 ~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  189 (311)
T 3ork_A          113 MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE  189 (311)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC------------------CCTTCCHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHH
Confidence            899999999999999999999999   99999999999999999999999999865432221  1223456899999999


Q ss_pred             ccccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhhhh-----hHHHHHHHHHHHHHhhccCCCCCCCHH
Q 044846          153 YFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSKEA-----EKEEVITFAMVAKRCLNLNGKKQPTMK  227 (290)
Q Consensus       153 ~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~li~~cl~~dp~~Rps~~  227 (290)
                      ++.+..++.++||||||+++|+|++|..||..................     ....+..+.++|.+||+.||++||++.
T Consensus       190 ~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~  269 (311)
T 3ork_A          190 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTA  269 (311)
T ss_dssp             HHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSH
T ss_pred             HhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhH
Confidence            999999999999999999999999999988654433222221111111     122456799999999999999999866


Q ss_pred             HHHHH-HHhh
Q 044846          228 EVTLE-LAGI  236 (290)
Q Consensus       228 el~~~-l~~~  236 (290)
                      +++.+ +...
T Consensus       270 ~~l~~~l~~~  279 (311)
T 3ork_A          270 AEMRADLVRV  279 (311)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            66544 4443


No 89 
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=3.6e-42  Score=306.12  Aligned_cols=233  Identities=13%  Similarity=0.141  Sum_probs=181.5

Q ss_pred             CceEEEEeecccCchh-----------HHHHHHHHHHHHhcCCCceeeEEeEEEeC----CcceEEEEeCCCCCHHHHHh
Q 044846            2 EELWLLKKSKSVHESN-----------VEQFINEVVILSQINHRNVVKILGCCLET----EVPLLVYEFIPNGSLYQYIH   66 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~-----------~~~~~~E~~~l~~l~Hpniv~~~~~~~~~----~~~~lv~e~~~~g~L~~~l~   66 (290)
                      ++.||+|++.......           ...+..|+..+..++||||+++++++...    ...+|||||+ +++|.+++.
T Consensus        65 ~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~  143 (364)
T 3op5_A           65 DAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYE  143 (364)
T ss_dssp             TCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHH
T ss_pred             ccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHH
Confidence            5789999987543221           11234455667777899999999999875    4589999999 999999998


Q ss_pred             hcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEec--cCCcEEEeccccccccccCCcee------
Q 044846           67 EQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLV--DKYQAKISDFRTFKSRAIDRTHL------  138 (290)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~--~~~~~kl~dfg~~~~~~~~~~~~------  138 (290)
                      ....   .+++..++.++.||+.||.|||+++   |+||||||+|||++  .++.+||+|||+++.........      
T Consensus       144 ~~~~---~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  217 (364)
T 3op5_A          144 ANAK---RFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADP  217 (364)
T ss_dssp             HTTS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCS
T ss_pred             hccC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCc
Confidence            7532   5899999999999999999999999   99999999999999  88999999999986543221111      


Q ss_pred             eccceecccccCccccccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHH---hhhhh---h------HHHHH
Q 044846          139 TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAY---FSKEA---E------KEEVI  206 (290)
Q Consensus       139 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~---~~~~~---~------~~~~~  206 (290)
                      .....||+.|+|||++.+..++.++|||||||++|+|++|..||.............   .....   .      ...+.
T Consensus       218 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (364)
T 3op5_A          218 KRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPG  297 (364)
T ss_dssp             SCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCH
T ss_pred             ccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHH
Confidence            123458999999999999999999999999999999999999887432221111110   00000   0      12256


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHHHHhhHhhhC
Q 044846          207 TFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIG  241 (290)
Q Consensus       207 ~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~~~~  241 (290)
                      .+.+++.+||+.||.+||++.+|++.|+.+....+
T Consensus       298 ~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~  332 (364)
T 3op5_A          298 EIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG  332 (364)
T ss_dssp             HHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence            79999999999999999999999999998877653


No 90 
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.4e-42  Score=311.39  Aligned_cols=224  Identities=21%  Similarity=0.276  Sum_probs=177.0

Q ss_pred             CceEEEEeecc--cCchhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCC--cceEEEEeCCCCCHHHHHhhcCCCCCCCC
Q 044846            2 EELWLLKKSKS--VHESNVEQFINEVVILSQIN-HRNVVKILGCCLETE--VPLLVYEFIPNGSLYQYIHEQTDDQLPIT   76 (290)
Q Consensus         2 ~~~~avK~~~~--~~~~~~~~~~~E~~~l~~l~-Hpniv~~~~~~~~~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~   76 (290)
                      |+.||+|++..  ......+.+.+|+.+++.+. ||||+++++++...+  ..|+|||||. |+|..++...     .++
T Consensus        34 ~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-----~~~  107 (388)
T 3oz6_A           34 GEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME-TDLHAVIRAN-----ILE  107 (388)
T ss_dssp             CCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS-EEHHHHHHHT-----CCC
T ss_pred             CCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccC-cCHHHHHHcC-----CCC
Confidence            67899999854  34556778899999999996 999999999998654  6899999996 6999999863     488


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccC--------------------Cc
Q 044846           77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAID--------------------RT  136 (290)
Q Consensus        77 ~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~--------------------~~  136 (290)
                      +..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++.....                    ..
T Consensus       108 ~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (388)
T 3oz6_A          108 PVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ  184 (388)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC----------
T ss_pred             HHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCccccccccccccccccccccccccccccccc
Confidence            9999999999999999999999   999999999999999999999999998753210                    11


Q ss_pred             eeeccceecccccCcccccc-CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhh--HHHhhhh--------------
Q 044846          137 HLTTQVKVTFGYVDPKYFRS-SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSL--AAYFSKE--------------  199 (290)
Q Consensus       137 ~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~--~~~~~~~--------------  199 (290)
                      .......||+.|+|||++.+ ..++.++|||||||++|+|++|.+||..........  ......+              
T Consensus       185 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~  264 (388)
T 3oz6_A          185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAK  264 (388)
T ss_dssp             -----CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHH
T ss_pred             ccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHH
Confidence            12344678999999999986 678999999999999999999999886543221110  0000000              


Q ss_pred             --------------------------------hhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          200 --------------------------------AEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       200 --------------------------------~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                                                      .....+..+.+|+.+||+.||++|||++|+++|.+
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~  331 (388)
T 3oz6_A          265 TMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPF  331 (388)
T ss_dssp             HHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTT
T ss_pred             HHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHH
Confidence                                            00022457899999999999999999999998854


No 91 
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=1.8e-42  Score=303.85  Aligned_cols=225  Identities=18%  Similarity=0.206  Sum_probs=176.5

Q ss_pred             CceEEEEeeccc----CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCH
Q 044846            2 EELWLLKKSKSV----HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW   77 (290)
Q Consensus         2 ~~~~avK~~~~~----~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~   77 (290)
                      |+.||+|+++..    .......+.+|+.+++.++||||+++++++...+..|+||||+++|+|.+++....    .+++
T Consensus        45 ~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~  120 (327)
T 3a62_A           45 GKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREG----IFME  120 (327)
T ss_dssp             TCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHS----SCCH
T ss_pred             CcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCC----CCCH
Confidence            678999998753    23345678899999999999999999999999999999999999999999998765    5889


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccC
Q 044846           78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSS  157 (290)
Q Consensus        78 ~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  157 (290)
                      ..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++..... ........||+.|+|||++.+.
T Consensus       121 ~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~  196 (327)
T 3a62_A          121 DTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD-GTVTHTFCGTIEYMAPEILMRS  196 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC-----------CTTSSCCTTSCHHHHTTS
T ss_pred             HHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCcccccccC-CccccccCCCcCccCHhhCcCC
Confidence            999999999999999999999   999999999999999999999999997643221 1223446789999999999999


Q ss_pred             CCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh--hhhhHHHHHHHHHHHHHhhccCCCCCC-----CHHHHH
Q 044846          158 QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS--KEAEKEEVITFAMVAKRCLNLNGKKQP-----TMKEVT  230 (290)
Q Consensus       158 ~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rp-----s~~el~  230 (290)
                      .++.++|||||||++|+|++|..||........ ......  ...+...+..+.+||.+||+.||.+||     ++.|++
T Consensus       197 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l  275 (327)
T 3a62_A          197 GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT-IDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQ  275 (327)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHTCCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHH
T ss_pred             CCCCcccchhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhCCCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHH
Confidence            999999999999999999999998865432211 111111  112233467799999999999999999     788998


Q ss_pred             HHHHh
Q 044846          231 LELAG  235 (290)
Q Consensus       231 ~~l~~  235 (290)
                      +|.+.
T Consensus       276 ~hp~f  280 (327)
T 3a62_A          276 AHPFF  280 (327)
T ss_dssp             HSGGG
T ss_pred             cCCcc
Confidence            87553


No 92 
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=3.1e-42  Score=299.70  Aligned_cols=237  Identities=21%  Similarity=0.242  Sum_probs=183.6

Q ss_pred             CceEEEEeecc---cCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKS---VHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~---~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|+++.   .+....+.+.+|+.+++.++||||+++++++...+..++||||+.+|+|.+++.........+++.
T Consensus        57 ~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  136 (310)
T 2wqm_A           57 GVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPER  136 (310)
T ss_dssp             CCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHH
T ss_pred             CceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHH
Confidence            67899999874   335567789999999999999999999999999999999999999999999997643333368999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCC
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .++.++.|++.||.|||+++   ++||||||+||+++.++.+||+|||++...... ........|+..|+|||++.+..
T Consensus       137 ~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~  212 (310)
T 2wqm_A          137 TVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSK-TTAAHSLVGTPYYMSPERIHENG  212 (310)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC-------------------CCSSCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeecCC-CccccccCCCeeEeChHHhCCCC
Confidence            99999999999999999999   999999999999999999999999997643322 12223456889999999999999


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh-----hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK-----EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLEL  233 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l  233 (290)
                      ++.++||||||+++|+|++|..|+................     ......+..+.+|+.+||+.||.+|||+.++++.|
T Consensus       213 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l  292 (310)
T 2wqm_A          213 YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVA  292 (310)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence            9999999999999999999998886432221111111111     11123456799999999999999999999999999


Q ss_pred             HhhHhhhCc
Q 044846          234 AGIRASIGA  242 (290)
Q Consensus       234 ~~~~~~~~~  242 (290)
                      +.+......
T Consensus       293 ~~l~~~~~~  301 (310)
T 2wqm_A          293 KRMHACTAS  301 (310)
T ss_dssp             HHHHHHHC-
T ss_pred             HHHHHhhhh
Confidence            999876543


No 93 
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.8e-42  Score=296.92  Aligned_cols=233  Identities=21%  Similarity=0.294  Sum_probs=189.9

Q ss_pred             CceEEEEeeccc-CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            2 EELWLLKKSKSV-HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         2 ~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      ++.||+|+++.. .....+.+.+|+++++.++||||+++++++ ..+..++||||+++++|.+++.....   .+++..+
T Consensus        37 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~  112 (287)
T 1u59_A           37 QIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKRE---EIPVSNV  112 (287)
T ss_dssp             CEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHTTCTT---TSCHHHH
T ss_pred             cceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCCCHHHHHHhCCc---cCCHHHH
Confidence            456999999764 345677899999999999999999999999 55678999999999999999975432   5899999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCcee--eccceecccccCccccccCC
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL--TTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~  158 (290)
                      ..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++..........  .....+++.|+|||++.+..
T Consensus       113 ~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  189 (287)
T 1u59_A          113 AELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK  189 (287)
T ss_dssp             HHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCE
T ss_pred             HHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCC
Confidence            999999999999999999   9999999999999999999999999987543322221  12344678899999998888


Q ss_pred             CCCcccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHh---hhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          159 FTEKSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYF---SKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      ++.++||||||+++|+|++ |..|+....... ......   ....+...+..+.++|.+||+.||++|||+.+++++|+
T Consensus       190 ~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~  268 (287)
T 1u59_A          190 FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-VMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR  268 (287)
T ss_dssp             ECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHHcCCCCCcccCCHHH-HHHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            9999999999999999998 888875433221 111111   11223345678999999999999999999999999999


Q ss_pred             hhHhhhCc
Q 044846          235 GIRASIGA  242 (290)
Q Consensus       235 ~~~~~~~~  242 (290)
                      .+..+...
T Consensus       269 ~~~~~~~~  276 (287)
T 1u59_A          269 ACYYSLAS  276 (287)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHhcCC
Confidence            99876543


No 94 
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=1.3e-42  Score=302.73  Aligned_cols=226  Identities=20%  Similarity=0.222  Sum_probs=179.6

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      |+.||||+++.......+.+.+|++++.++ +||||+++++++...+..++||||+++|+|.+++....    .+++..+
T Consensus        38 ~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~  113 (316)
T 2ac3_A           38 SQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRR----HFNELEA  113 (316)
T ss_dssp             CCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHS----SCCHHHH
T ss_pred             CcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccC----CCCHHHH
Confidence            678999999876666778899999999996 89999999999999999999999999999999998765    5899999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCc---EEEeccccccccccCCc------eeeccceecccccCc
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ---AKISDFRTFKSRAIDRT------HLTTQVKVTFGYVDP  151 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~---~kl~dfg~~~~~~~~~~------~~~~~~~g~~~y~aP  151 (290)
                      ..++.||+.||.|||+++   |+||||||+||+++.++.   +||+|||++........      .......||+.|+||
T Consensus       114 ~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  190 (316)
T 2ac3_A          114 SVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAP  190 (316)
T ss_dssp             HHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCH
T ss_pred             HHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccCh
Confidence            999999999999999999   999999999999998776   99999999765432111      112234589999999


Q ss_pred             ccccc-----CCCCCcccchhhHHHHHHHhcCCCCcccchhhh-------------hhh-HHHhhh------hhhHHHHH
Q 044846          152 KYFRS-----SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEEN-------------RSL-AAYFSK------EAEKEEVI  206 (290)
Q Consensus       152 E~~~~-----~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~-------------~~~-~~~~~~------~~~~~~~~  206 (290)
                      |++.+     ..++.++|||||||++|+|++|.+||.......             ..+ ......      ......+.
T Consensus       191 E~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  270 (316)
T 2ac3_A          191 EVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISC  270 (316)
T ss_dssp             HHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCH
T ss_pred             HHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCH
Confidence            99875     457889999999999999999999886532110             111 111110      01112456


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          207 TFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       207 ~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      .+.+||.+||+.||.+|||+.|++++.+
T Consensus       271 ~~~~li~~~L~~dP~~Rps~~e~l~hp~  298 (316)
T 2ac3_A          271 AAKDLISKLLVRDAKQRLSAAQVLQHPW  298 (316)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHHSTT
T ss_pred             HHHHHHHHHhhCChhhCCCHHHHhcChh
Confidence            7999999999999999999999998754


No 95 
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=3.5e-42  Score=299.56  Aligned_cols=230  Identities=19%  Similarity=0.180  Sum_probs=179.4

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|+++..   +....+.+.+|+.+++.++||||+++++++...+..++||||+++++|.+++....    .+++.
T Consensus        59 ~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~  134 (309)
T 2h34_A           59 ERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQG----PLAPP  134 (309)
T ss_dssp             TEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHHHC----SCCHH
T ss_pred             CeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcC----CCCHH
Confidence            578999998643   23345789999999999999999999999999999999999999999999998764    58999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCC
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .++.++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++...............|++.|+|||++.+..
T Consensus       135 ~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  211 (309)
T 2h34_A          135 RAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESH  211 (309)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC----------------CCGGGCCGGGTCC--
T ss_pred             HHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCccccccccccccccCCCcCccCHHHHcCCC
Confidence            99999999999999999999   999999999999999999999999997654433223334466899999999999999


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------hhhhHHHHHHHHHHHHHhhccCCCCCC-CHHHHHH
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------KEAEKEEVITFAMVAKRCLNLNGKKQP-TMKEVTL  231 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~Rp-s~~el~~  231 (290)
                      ++.++||||||+++|+|++|..||.......  ......      .......+..+.++|.+||+.||++|| |++++++
T Consensus       212 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          212 ATYRADIYALTCVLYECLTGSPPYQGDQLSV--MGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             --CCCHHHHHHHHHHHHHHSSCSSCSCHHHH--HHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             CCchHhHHHHHHHHHHHHHCCCCCCCchHHH--HHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence            9999999999999999999999886544321  111111      111233456799999999999999999 8999999


Q ss_pred             HHHhhHhhh
Q 044846          232 ELAGIRASI  240 (290)
Q Consensus       232 ~l~~~~~~~  240 (290)
                      .|+......
T Consensus       290 ~l~~~l~~~  298 (309)
T 2h34_A          290 AAHAALATA  298 (309)
T ss_dssp             HHHHTCC--
T ss_pred             HHHHHHHhh
Confidence            998775543


No 96 
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=3.6e-42  Score=315.07  Aligned_cols=226  Identities=22%  Similarity=0.254  Sum_probs=172.5

Q ss_pred             CceEEEEeecc--cCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-----CcceEEEEeCCCCCHHHHHhhcCCCCCC
Q 044846            2 EELWLLKKSKS--VHESNVEQFINEVVILSQINHRNVVKILGCCLET-----EVPLLVYEFIPNGSLYQYIHEQTDDQLP   74 (290)
Q Consensus         2 ~~~~avK~~~~--~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~   74 (290)
                      |+.||||++..  .+....+++.+|+++|+.++||||+++++++...     ...|+||||+ +|+|.+++....    .
T Consensus        78 ~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~----~  152 (458)
T 3rp9_A           78 KRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA-DSDFKKLFRTPV----Y  152 (458)
T ss_dssp             -CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCC-SEEHHHHHHSSC----C
T ss_pred             CcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEecc-ccchhhhcccCC----C
Confidence            67899999864  3345567899999999999999999999999543     4689999998 679999998654    5


Q ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCc------------------
Q 044846           75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT------------------  136 (290)
Q Consensus        75 ~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~------------------  136 (290)
                      +++..++.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++.......                  
T Consensus       153 l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (458)
T 3rp9_A          153 LTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVT  229 (458)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC------------
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCcccccccccc
Confidence            899999999999999999999999   99999999999999999999999999875432111                  


Q ss_pred             --------eeeccceecccccCcccc-ccCCCCCcccchhhHHHHHHHhc-----------CCCCcccchh---------
Q 044846          137 --------HLTTQVKVTFGYVDPKYF-RSSQFTEKSDVYSFSVVLVELNW-----------TKPIHLVDVE---------  187 (290)
Q Consensus       137 --------~~~~~~~g~~~y~aPE~~-~~~~~~~~~DiwS~G~il~~l~~-----------~~~~~~~~~~---------  187 (290)
                              .......||+.|+|||++ ....|+.++|||||||++|||++           +.++|.....         
T Consensus       230 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~  309 (458)
T 3rp9_A          230 FPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKA  309 (458)
T ss_dssp             ---------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC-------------
T ss_pred             ccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccc
Confidence                    122446789999999986 45679999999999999999998           5555532210         


Q ss_pred             ----------hhhhhHHH---hhh------------------------------hhhHHHHHHHHHHHHHhhccCCCCCC
Q 044846          188 ----------ENRSLAAY---FSK------------------------------EAEKEEVITFAMVAKRCLNLNGKKQP  224 (290)
Q Consensus       188 ----------~~~~~~~~---~~~------------------------------~~~~~~~~~~~~li~~cl~~dp~~Rp  224 (290)
                                ....+...   ...                              ......+.++.+||.+||..||++||
T Consensus       310 ~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~  389 (458)
T 3rp9_A          310 GNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRI  389 (458)
T ss_dssp             -------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSC
T ss_pred             cccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccC
Confidence                      00000000   000                              00112256789999999999999999


Q ss_pred             CHHHHHHHHHh
Q 044846          225 TMKEVTLELAG  235 (290)
Q Consensus       225 s~~el~~~l~~  235 (290)
                      |++|+++|.+-
T Consensus       390 t~~e~L~Hp~f  400 (458)
T 3rp9_A          390 TINECLAHPFF  400 (458)
T ss_dssp             CHHHHHHSGGG
T ss_pred             CHHHHhcCHhh
Confidence            99999998654


No 97 
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=8.7e-43  Score=308.53  Aligned_cols=223  Identities=20%  Similarity=0.211  Sum_probs=170.9

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      |+.||+|+++..  ...+.+.+|+++++.++||||+++++++...+..++||||+++|+|.+++....    .+++..+.
T Consensus        78 ~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~  151 (349)
T 2w4o_A           78 QKPYALKVLKKT--VDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKG----YYSERDAA  151 (349)
T ss_dssp             CCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCS----SCCHHHHH
T ss_pred             CcEEEEEEeccc--hhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHhcC----CCCHHHHH
Confidence            578999999753  245678899999999999999999999999999999999999999999997654    58999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEecc---CCcEEEeccccccccccCCceeeccceecccccCccccccCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD---KYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .++.||+.||.|||+++   |+||||||+|||++.   ++.+||+|||+++....  ........||+.|+|||++.+..
T Consensus       152 ~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~gt~~y~aPE~~~~~~  226 (349)
T 2w4o_A          152 DAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH--QVLMKTVCGTPGYCAPEILRGCA  226 (349)
T ss_dssp             HHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC------------------CGGGSCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccCc--ccccccccCCCCccCHHHhcCCC
Confidence            99999999999999999   999999999999975   88999999999765332  22234467899999999999999


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh------hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK------EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLE  232 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~  232 (290)
                      ++.++|||||||++|+|++|..||................      ......+..+.+||.+||+.||++|||+.|++++
T Consensus       227 ~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          227 YGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH  306 (349)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             CCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            9999999999999999999999886544332222222111      1123456679999999999999999999999987


Q ss_pred             HHh
Q 044846          233 LAG  235 (290)
Q Consensus       233 l~~  235 (290)
                      .+-
T Consensus       307 p~~  309 (349)
T 2w4o_A          307 PWV  309 (349)
T ss_dssp             TTT
T ss_pred             ccc
Confidence            543


No 98 
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=6.4e-42  Score=292.95  Aligned_cols=224  Identities=18%  Similarity=0.185  Sum_probs=185.3

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      ++.||+|++........+.+.+|+++++.++||||+++++++...+..++||||+++++|.+++....    .+++..+.
T Consensus        34 ~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~  109 (277)
T 3f3z_A           34 RIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKR----VFRESDAA  109 (277)
T ss_dssp             CCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHC----SCCHHHHH
T ss_pred             CcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHcC----CCCHHHHH
Confidence            46789999987666678889999999999999999999999999999999999999999999998765    58999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEe---ccCCcEEEeccccccccccCCceeeccceecccccCccccccCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILL---VDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .++.|++.||.|||+++   |+||||||+||++   +.++.+||+|||++......  .......||+.|+|||++.+. 
T Consensus       110 ~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~-  183 (277)
T 3f3z_A          110 RIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTKVGTPYYVSPQVLEGL-  183 (277)
T ss_dssp             HHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT--SCBCCCCSCTTTCCHHHHTTC-
T ss_pred             HHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc--cchhccCCCCCccChHHhccc-
Confidence            99999999999999999   9999999999999   78889999999997654322  223345689999999998654 


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh-----hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS-----KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLEL  233 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l  233 (290)
                      ++.++||||||+++|+|++|..|+...............     .......+..+.+||.+||+.||.+|||+.+++++.
T Consensus       184 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~  263 (277)
T 3f3z_A          184 YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHE  263 (277)
T ss_dssp             BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred             CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence            899999999999999999999988654332221111111     011113467799999999999999999999999875


Q ss_pred             Hh
Q 044846          234 AG  235 (290)
Q Consensus       234 ~~  235 (290)
                      +-
T Consensus       264 ~~  265 (277)
T 3f3z_A          264 WF  265 (277)
T ss_dssp             HH
T ss_pred             HH
Confidence            53


No 99 
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=8.2e-43  Score=314.71  Aligned_cols=226  Identities=16%  Similarity=0.177  Sum_probs=184.4

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|+++..   .....+.+.+|..++..++||||++++++|.+.+..|+||||++||+|.+++.....   .+++.
T Consensus        86 ~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~---~l~~~  162 (412)
T 2vd5_A           86 GQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGE---RIPAE  162 (412)
T ss_dssp             CCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSS---CCCHH
T ss_pred             CCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCC---CCCHH
Confidence            678999998642   233445688999999999999999999999999999999999999999999987542   58999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccc---
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFR---  155 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---  155 (290)
                      .++.++.||+.||.|||+++   |+||||||+|||++.++++||+|||+++..............||+.|+|||++.   
T Consensus       163 ~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~  239 (412)
T 2vd5_A          163 MARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVG  239 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcc
Confidence            99999999999999999999   999999999999999999999999998765443333344567999999999987   


Q ss_pred             ----cCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh-------hhhhHHHHHHHHHHHHHhhccCCCCC-
Q 044846          156 ----SSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS-------KEAEKEEVITFAMVAKRCLNLNGKKQ-  223 (290)
Q Consensus       156 ----~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~cl~~dp~~R-  223 (290)
                          ...++.++|||||||++|||++|.+||........ ......       .......+.++.+||.+||. +|.+| 
T Consensus       240 ~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~-~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rl  317 (412)
T 2vd5_A          240 GGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET-YGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRL  317 (412)
T ss_dssp             TCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCT
T ss_pred             cCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH-HHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcC
Confidence                35689999999999999999999999875433221 111111       01112356789999999999 99998 


Q ss_pred             --CCHHHHHHHHHh
Q 044846          224 --PTMKEVTLELAG  235 (290)
Q Consensus       224 --ps~~el~~~l~~  235 (290)
                        |+++|+++|-+.
T Consensus       318 gr~~~~ei~~Hpff  331 (412)
T 2vd5_A          318 GRGGAGDFRTHPFF  331 (412)
T ss_dssp             TTTTHHHHHTSGGG
T ss_pred             CCCCHHHHhcCCCc
Confidence              589999988553


No 100
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=1e-42  Score=303.46  Aligned_cols=234  Identities=20%  Similarity=0.304  Sum_probs=187.2

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEe----CCcceEEEEeCCCCCHHHHHhhcCCCCCCCCH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLE----TEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW   77 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~   77 (290)
                      |+.||+|++........+.+.+|+++++.++||||+++++++..    ....++||||+.+|+|.+++.........+++
T Consensus        54 ~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~  133 (317)
T 2buj_A           54 GHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTE  133 (317)
T ss_dssp             CCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCH
T ss_pred             CcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCH
Confidence            67899999987777778899999999999999999999999873    34789999999999999999875333346899


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCce--------eeccceeccccc
Q 044846           78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH--------LTTQVKVTFGYV  149 (290)
Q Consensus        78 ~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~--------~~~~~~g~~~y~  149 (290)
                      ..++.++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++.........        ......|++.|+
T Consensus       134 ~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  210 (317)
T 2buj_A          134 DQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYR  210 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGC
T ss_pred             HHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccC
Confidence            999999999999999999999   999999999999999999999999987643211100        012245688999


Q ss_pred             CccccccCC---CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHH----hhhhhhHHHHHHHHHHHHHhhccCCCC
Q 044846          150 DPKYFRSSQ---FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAY----FSKEAEKEEVITFAMVAKRCLNLNGKK  222 (290)
Q Consensus       150 aPE~~~~~~---~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~cl~~dp~~  222 (290)
                      |||++.+..   ++.++||||||+++|+|++|..||.............    .........+..+.++|.+||+.||.+
T Consensus       211 aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~  290 (317)
T 2buj_A          211 APELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQ  290 (317)
T ss_dssp             CGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             CHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhh
Confidence            999987654   6889999999999999999999875322211111111    111112234567999999999999999


Q ss_pred             CCCHHHHHHHHHhhHh
Q 044846          223 QPTMKEVTLELAGIRA  238 (290)
Q Consensus       223 Rps~~el~~~l~~~~~  238 (290)
                      |||+.+++++|+.+..
T Consensus       291 Rps~~~ll~~L~~~~~  306 (317)
T 2buj_A          291 RPHIPLLLSQLEALQP  306 (317)
T ss_dssp             SCCHHHHHHHHHHTCC
T ss_pred             CCCHHHHHHHhhhcCC
Confidence            9999999999988754


No 101
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.3e-42  Score=302.87  Aligned_cols=233  Identities=26%  Similarity=0.380  Sum_probs=189.7

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC--cceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETE--VPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.||+|++........+.+.+|+++++.++||||+++++++...+  ..++||||+++|+|.+++.....   .+++..
T Consensus        70 ~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~  146 (326)
T 2w1i_A           70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE---RIDHIK  146 (326)
T ss_dssp             CEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTT---SSCHHH
T ss_pred             ceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhccc---CCCHHH
Confidence            6789999998777777889999999999999999999999987644  78999999999999999987543   589999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCcee--eccceecccccCccccccC
Q 044846           80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL--TTQVKVTFGYVDPKYFRSS  157 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~  157 (290)
                      ++.++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++..........  .....++..|+|||++.+.
T Consensus       147 ~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  223 (326)
T 2w1i_A          147 LLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTES  223 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCC
Confidence            9999999999999999999   9999999999999999999999999987654332221  2234567789999999988


Q ss_pred             CCCCcccchhhHHHHHHHhcCCCCcccchhhhh--------------hhHHHhh----hhhhHHHHHHHHHHHHHhhccC
Q 044846          158 QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENR--------------SLAAYFS----KEAEKEEVITFAMVAKRCLNLN  219 (290)
Q Consensus       158 ~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~--------------~~~~~~~----~~~~~~~~~~~~~li~~cl~~d  219 (290)
                      .++.++||||||+++|+|++|..++........              .+.....    ...+...+..+.++|.+||+.|
T Consensus       224 ~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  303 (326)
T 2w1i_A          224 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNN  303 (326)
T ss_dssp             EEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSS
T ss_pred             CCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCC
Confidence            899999999999999999999887753321110              0001100    1112334567999999999999


Q ss_pred             CCCCCCHHHHHHHHHhhHhhh
Q 044846          220 GKKQPTMKEVTLELAGIRASI  240 (290)
Q Consensus       220 p~~Rps~~el~~~l~~~~~~~  240 (290)
                      |++|||+.|+++.|+.+...+
T Consensus       304 P~~Rps~~el~~~L~~l~~~l  324 (326)
T 2w1i_A          304 VNQRPSFRDLALRVDQIRDQM  324 (326)
T ss_dssp             GGGSCCHHHHHHHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHHHHHHHh
Confidence            999999999999999987654


No 102
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=1.8e-42  Score=307.93  Aligned_cols=225  Identities=20%  Similarity=0.199  Sum_probs=174.7

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      |+.||+|++..... ..+.+.+|+.+++.++||||+++++++...+..++||||+.+|+|.+++....    .+++..++
T Consensus        45 ~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~  119 (361)
T 3uc3_A           45 KELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAG----RFSEDEAR  119 (361)
T ss_dssp             CCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS----SCCHHHHH
T ss_pred             CcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcC----CCCHHHHH
Confidence            67899999975332 34568899999999999999999999999999999999999999999998765    58999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCc--EEEeccccccccccCCceeeccceecccccCccccccCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ--AKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQF  159 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~--~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~  159 (290)
                      .++.|++.||.|||+++   |+||||||+|||++.++.  +||+|||+++....  ........||+.|+|||++.+..+
T Consensus       120 ~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~  194 (361)
T 3uc3_A          120 FFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL--HSQPKSTVGTPAYIAPEVLLRQEY  194 (361)
T ss_dssp             HHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC-----------------CTTSCHHHHHCSSC
T ss_pred             HHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCccccccc--cCCCCCCcCCCCcCChhhhcCCCC
Confidence            99999999999999999   999999999999987765  99999999764322  122234568999999999988887


Q ss_pred             CCc-ccchhhHHHHHHHhcCCCCcccchhhh---hhhHHHhh----hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 044846          160 TEK-SDVYSFSVVLVELNWTKPIHLVDVEEN---RSLAAYFS----KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTL  231 (290)
Q Consensus       160 ~~~-~DiwS~G~il~~l~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~  231 (290)
                      +.+ +|||||||++|+|++|..||.......   ........    .+.....+..+.+||.+||+.||.+|||+.|+++
T Consensus       195 ~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~  274 (361)
T 3uc3_A          195 DGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKT  274 (361)
T ss_dssp             CHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             CCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence            665 899999999999999999886433211   11111111    1111134567899999999999999999999999


Q ss_pred             HHHhh
Q 044846          232 ELAGI  236 (290)
Q Consensus       232 ~l~~~  236 (290)
                      |.+..
T Consensus       275 hp~f~  279 (361)
T 3uc3_A          275 HSWFL  279 (361)
T ss_dssp             SHHHH
T ss_pred             Ccchh
Confidence            87653


No 103
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=6.8e-43  Score=318.93  Aligned_cols=226  Identities=17%  Similarity=0.157  Sum_probs=176.6

Q ss_pred             CceEEEEeecc---cCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKS---VHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~---~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|+++.   ........+.+|+.+++.++||||++++++|...+..++||||+++|+|..++....    .+++.
T Consensus       173 ~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~  248 (446)
T 4ejn_A          173 GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSED  248 (446)
T ss_dssp             CCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHHHS----CCCHH
T ss_pred             CCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcC----CCCHH
Confidence            67899999864   244556778899999999999999999999999999999999999999999998765    58999


Q ss_pred             HHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccC
Q 044846           79 MRLRITVEVSRVLSYLHS-VASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSS  157 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~-~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  157 (290)
                      .+..++.||+.||.|||+ ++   |+||||||+|||++.++.+||+|||+++..... ........||+.|+|||++.+.
T Consensus       249 ~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~  324 (446)
T 4ejn_A          249 RARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-GATMKTFCGTPEYLAPEVLEDN  324 (446)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC------CCSSSCGGGCCHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceeccCC-CcccccccCCccccCHhhcCCC
Confidence            999999999999999998 88   999999999999999999999999998643222 2223456789999999999999


Q ss_pred             CCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhH-HHhhhhhhHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q 044846          158 QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLA-AYFSKEAEKEEVITFAMVAKRCLNLNGKKQP-----TMKEVTL  231 (290)
Q Consensus       158 ~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-----s~~el~~  231 (290)
                      .++.++|||||||++|+|++|..||........... .......+...+..+.+||.+||+.||.+||     |+.|+++
T Consensus       325 ~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          325 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             CCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence            999999999999999999999998865432211111 1111112234567799999999999999999     9999998


Q ss_pred             HHHh
Q 044846          232 ELAG  235 (290)
Q Consensus       232 ~l~~  235 (290)
                      |.+.
T Consensus       405 hp~f  408 (446)
T 4ejn_A          405 HRFF  408 (446)
T ss_dssp             SGGG
T ss_pred             Cccc
Confidence            7543


No 104
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=2.7e-42  Score=301.69  Aligned_cols=233  Identities=17%  Similarity=0.289  Sum_probs=177.5

Q ss_pred             eEEEEeeccc--CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcc------eEEEEeCCCCCHHHHHhhcCC--CCC
Q 044846            4 LWLLKKSKSV--HESNVEQFINEVVILSQINHRNVVKILGCCLETEVP------LLVYEFIPNGSLYQYIHEQTD--DQL   73 (290)
Q Consensus         4 ~~avK~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~------~lv~e~~~~g~L~~~l~~~~~--~~~   73 (290)
                      .||+|+++..  .....+.+.+|+++++.++||||+++++++......      ++||||+.+|+|.+++.....  ...
T Consensus        53 ~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~  132 (323)
T 3qup_A           53 KVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPF  132 (323)
T ss_dssp             EEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CC
T ss_pred             eEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhcccccc
Confidence            6899998753  455678899999999999999999999999877655      999999999999999976432  222


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCc-eeeccceecccccCcc
Q 044846           74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT-HLTTQVKVTFGYVDPK  152 (290)
Q Consensus        74 ~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE  152 (290)
                      .+++..++.++.|++.||.|||+++   |+||||||+|||++.++.+||+|||+++....... .......+++.|+|||
T Consensus       133 ~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE  209 (323)
T 3qup_A          133 NLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALE  209 (323)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHH
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCch
Confidence            5889999999999999999999999   99999999999999999999999999865432221 1223345677899999


Q ss_pred             ccccCCCCCcccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHh---hhhhhHHHHHHHHHHHHHhhccCCCCCCCHHH
Q 044846          153 YFRSSQFTEKSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYF---SKEAEKEEVITFAMVAKRCLNLNGKKQPTMKE  228 (290)
Q Consensus       153 ~~~~~~~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~e  228 (290)
                      ++.+..++.++|||||||++|+|++ |.+|+...... .......   ....+...+..+.+|+.+||+.||.+|||+.+
T Consensus       210 ~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  288 (323)
T 3qup_A          210 SLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA-EIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTC  288 (323)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHH
T ss_pred             hhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH-HHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHH
Confidence            9999999999999999999999999 77776543222 1111111   11223345577999999999999999999999


Q ss_pred             HHHHHHhhHhhh
Q 044846          229 VTLELAGIRASI  240 (290)
Q Consensus       229 l~~~l~~~~~~~  240 (290)
                      +++.|+.+....
T Consensus       289 l~~~l~~~l~~~  300 (323)
T 3qup_A          289 LRMELENILGHL  300 (323)
T ss_dssp             HHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHh
Confidence            999999887644


No 105
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=2e-42  Score=303.74  Aligned_cols=234  Identities=20%  Similarity=0.298  Sum_probs=188.3

Q ss_pred             ceEEEEeeccc-CchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCC----------
Q 044846            3 ELWLLKKSKSV-HESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD----------   70 (290)
Q Consensus         3 ~~~avK~~~~~-~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~----------   70 (290)
                      ..||+|+++.. .....+.+.+|+.+++.+ +||||+++++++...+..++||||+++|+|.+++.....          
T Consensus        77 ~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~  156 (333)
T 2i1m_A           77 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAI  156 (333)
T ss_dssp             CEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-----
T ss_pred             hHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccc
Confidence            46999998754 344567899999999999 899999999999999999999999999999999976421          


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCc-eeeccceeccccc
Q 044846           71 DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT-HLTTQVKVTFGYV  149 (290)
Q Consensus        71 ~~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~g~~~y~  149 (290)
                      ....+++..++.++.||+.||.|||+++   |+||||||+||+++.++.+||+|||++........ .......+++.|+
T Consensus       157 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~  233 (333)
T 2i1m_A          157 ANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM  233 (333)
T ss_dssp             --CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGS
T ss_pred             cccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCcccc
Confidence            0125789999999999999999999999   99999999999999999999999999875433222 2233456788999


Q ss_pred             CccccccCCCCCcccchhhHHHHHHHhc-CCCCcccchhhhhh---hHHHhhhhhhHHHHHHHHHHHHHhhccCCCCCCC
Q 044846          150 DPKYFRSSQFTEKSDVYSFSVVLVELNW-TKPIHLVDVEENRS---LAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPT  225 (290)
Q Consensus       150 aPE~~~~~~~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  225 (290)
                      |||++.+..++.++||||||+++|+|++ |.+|+.........   .........+...+..+.+++.+||+.||.+|||
T Consensus       234 aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps  313 (333)
T 2i1m_A          234 APESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT  313 (333)
T ss_dssp             CHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcC
Confidence            9999999999999999999999999998 77776543221111   1111111122234567899999999999999999


Q ss_pred             HHHHHHHHHhhHhh
Q 044846          226 MKEVTLELAGIRAS  239 (290)
Q Consensus       226 ~~el~~~l~~~~~~  239 (290)
                      +.+++++|+.+...
T Consensus       314 ~~~l~~~L~~~~~~  327 (333)
T 2i1m_A          314 FQQICSFLQEQAQE  327 (333)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999887654


No 106
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.9e-42  Score=302.40  Aligned_cols=231  Identities=19%  Similarity=0.274  Sum_probs=182.7

Q ss_pred             ceEEEEeeccc-CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            3 ELWLLKKSKSV-HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         3 ~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      ..||+|+++.. .......+.+|+++++.++||||+++++++...+..++||||+++|+|.+++.....   .+++..++
T Consensus        74 ~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~  150 (333)
T 1mqb_A           74 VPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG---EFSVLQLV  150 (333)
T ss_dssp             EEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTT---CSCHHHHH
T ss_pred             ccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCC---CCCHHHHH
Confidence            35999998753 344566799999999999999999999999999999999999999999999986532   58999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCcee--eccceecccccCccccccCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL--TTQVKVTFGYVDPKYFRSSQF  159 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~  159 (290)
                      .++.||+.||.|||+++   |+||||||+||+++.++.+||+|||+++.........  .....++..|+|||++.+..+
T Consensus       151 ~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  227 (333)
T 1mqb_A          151 GMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKF  227 (333)
T ss_dssp             HHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCC
T ss_pred             HHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCC
Confidence            99999999999999999   9999999999999999999999999986543222111  122345778999999999999


Q ss_pred             CCcccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHh---hhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 044846          160 TEKSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYF---SKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAG  235 (290)
Q Consensus       160 ~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~  235 (290)
                      +.++||||||+++|+|++ |..|+...... .......   ....+...+..+.+++.+||+.||.+||++.++++.|+.
T Consensus       228 ~~~~Di~slG~il~ellt~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~  306 (333)
T 1mqb_A          228 TSASDVWSFGIVMWEVMTYGERPYWELSNH-EVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDK  306 (333)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             CchhhhHHHHHHHHHHHcCCCCCcccCCHH-HHHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            999999999999999998 88877543221 1111111   112223456679999999999999999999999999998


Q ss_pred             hHhhh
Q 044846          236 IRASI  240 (290)
Q Consensus       236 ~~~~~  240 (290)
                      +....
T Consensus       307 ~~~~~  311 (333)
T 1mqb_A          307 LIRAP  311 (333)
T ss_dssp             HHHSG
T ss_pred             HHhcc
Confidence            87643


No 107
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.6e-42  Score=304.10  Aligned_cols=229  Identities=20%  Similarity=0.334  Sum_probs=179.3

Q ss_pred             EEEEeecc-cCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHHHH
Q 044846            5 WLLKKSKS-VHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRI   83 (290)
Q Consensus         5 ~avK~~~~-~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~   83 (290)
                      ||+|.++. ......+.+.+|+.+++.++||||+++++++.... .++|+||+.+|+|.+++.....   .+++..++.+
T Consensus        47 v~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~~~l~~~~~---~~~~~~~~~i  122 (327)
T 3lzb_A           47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKD---NIGSQYLLNW  122 (327)
T ss_dssp             EEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCCSSCBHHHHHHHTTT---CCCHHHHHHH
T ss_pred             EEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEecCCCcHHHHHHhcCC---CCCHHHHHHH
Confidence            57777753 34556788999999999999999999999998765 7899999999999999987543   5899999999


Q ss_pred             HHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCce-eeccceecccccCccccccCCCCCc
Q 044846           84 TVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH-LTTQVKVTFGYVDPKYFRSSQFTEK  162 (290)
Q Consensus        84 ~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~  162 (290)
                      +.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++........ ......+++.|+|||++.+..++.+
T Consensus       123 ~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~  199 (327)
T 3lzb_A          123 CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ  199 (327)
T ss_dssp             HHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHH
T ss_pred             HHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChH
Confidence            999999999999999   999999999999999999999999998754322221 2233456778999999999999999


Q ss_pred             ccchhhHHHHHHHhc-CCCCcccchhhhhh--hHHHhhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhHhh
Q 044846          163 SDVYSFSVVLVELNW-TKPIHLVDVEENRS--LAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRAS  239 (290)
Q Consensus       163 ~DiwS~G~il~~l~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~~  239 (290)
                      +|||||||++|+|++ |..||.........  +........+...+..+.++|.+||+.||.+|||+.|+++.|+.+...
T Consensus       200 ~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  279 (327)
T 3lzb_A          200 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             HHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence            999999999999998 88877543222111  111111122334566799999999999999999999999999988754


Q ss_pred             h
Q 044846          240 I  240 (290)
Q Consensus       240 ~  240 (290)
                      .
T Consensus       280 ~  280 (327)
T 3lzb_A          280 P  280 (327)
T ss_dssp             H
T ss_pred             c
Confidence            3


No 108
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=2.7e-42  Score=301.37  Aligned_cols=228  Identities=20%  Similarity=0.260  Sum_probs=181.4

Q ss_pred             CceEEEEeecccC-chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCC--CCCCCCHH
Q 044846            2 EELWLLKKSKSVH-ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD--DQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~   78 (290)
                      |+.||+|+++... ....+.+.+|+++++.++||||+++++++...+..++||||+. |+|.+++.....  ....+++.
T Consensus        30 ~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~  108 (317)
T 2pmi_A           30 GVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELN  108 (317)
T ss_dssp             CCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHH
T ss_pred             CcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CCHHHHHHhccccccccCCCHH
Confidence            6789999987533 3345678899999999999999999999999999999999996 699999976532  11258899


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccC-
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSS-  157 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-  157 (290)
                      .+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+. 
T Consensus       109 ~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~  184 (317)
T 2pmi_A          109 LVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV-NTFSSEVVTLWYRAPDVLMGSR  184 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETTSCC-CCCCCCCSCCTTCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecCCCc-ccCCCCcccccccCchHhhCCC
Confidence            99999999999999999999   9999999999999999999999999986543221 122345679999999999764 


Q ss_pred             CCCCcccchhhHHHHHHHhcCCCCcccchhhhhh--hHHHh---------------------------------hhhhhH
Q 044846          158 QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRS--LAAYF---------------------------------SKEAEK  202 (290)
Q Consensus       158 ~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~--~~~~~---------------------------------~~~~~~  202 (290)
                      .++.++|||||||++|+|++|.+||.........  +....                                 ......
T Consensus       185 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (317)
T 2pmi_A          185 TYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKE  264 (317)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSS
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccc
Confidence            5899999999999999999999988654322111  00000                                 000011


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          203 EEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       203 ~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      ..+..+.+||.+||+.||++|||+.|++++.+
T Consensus       265 ~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~  296 (317)
T 2pmi_A          265 PLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW  296 (317)
T ss_dssp             CCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred             cCCHHHHHHHHHHCCCCcccCCCHHHHhCChh
Confidence            23457999999999999999999999987754


No 109
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.9e-42  Score=325.87  Aligned_cols=231  Identities=22%  Similarity=0.287  Sum_probs=185.2

Q ss_pred             ceEEEEeeccc-CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            3 ELWLLKKSKSV-HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         3 ~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      ..||||+++.. .....+.+.+|+++|+.++|||||++++++.. +..++|||||++|+|.+++.....   .+++..+.
T Consensus       364 ~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~---~l~~~~~~  439 (613)
T 2ozo_A          364 IDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKRE---EIPVSNVA  439 (613)
T ss_dssp             EEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCBHHHHHTTCTT---TSCHHHHH
T ss_pred             EEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCcHHHHHhhccC---CCCHHHHH
Confidence            46899999754 34467889999999999999999999999976 568999999999999999975432   58999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceee--ccceecccccCccccccCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLT--TQVKVTFGYVDPKYFRSSQF  159 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~  159 (290)
                      .++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++..........  ....+++.|+|||++.+..+
T Consensus       440 ~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~  516 (613)
T 2ozo_A          440 ELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF  516 (613)
T ss_dssp             HHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCC
Confidence            99999999999999999   99999999999999999999999999875433222111  22345678999999999999


Q ss_pred             CCcccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHh---hhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 044846          160 TEKSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYF---SKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAG  235 (290)
Q Consensus       160 ~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~  235 (290)
                      +.++|||||||++|||++ |..|+....... ......   ....+..++..+.+||.+||+.||++|||+.++++.|+.
T Consensus       517 ~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~  595 (613)
T 2ozo_A          517 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-VMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA  595 (613)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-HHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            999999999999999997 888775433221 111111   112234466789999999999999999999999999998


Q ss_pred             hHhhhC
Q 044846          236 IRASIG  241 (290)
Q Consensus       236 ~~~~~~  241 (290)
                      +.....
T Consensus       596 ~~~~~~  601 (613)
T 2ozo_A          596 CYYSLA  601 (613)
T ss_dssp             HHHHHS
T ss_pred             HHHHhc
Confidence            876653


No 110
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=2.4e-42  Score=305.98  Aligned_cols=224  Identities=19%  Similarity=0.212  Sum_probs=185.1

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW   77 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~   77 (290)
                      |+.||+|+++..   .....+.+..|..++..+ +||||+++++++...+..|+||||++||+|.+++....    .+++
T Consensus        45 ~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~----~~~~  120 (353)
T 2i0e_A           45 DELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG----RFKE  120 (353)
T ss_dssp             EEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS----SCCH
T ss_pred             CCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcC----CCCH
Confidence            567999998642   234567788999999988 89999999999999999999999999999999998765    5899


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccC
Q 044846           78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSS  157 (290)
Q Consensus        78 ~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  157 (290)
                      ..++.++.||+.||.|||+++   |+||||||+|||++.+|.+||+|||+++..... ........||+.|+|||++.+.
T Consensus       121 ~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~  196 (353)
T 2i0e_A          121 PHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD-GVTTKTFCGTPDYIAPEIIAYQ  196 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT-TCCBCCCCSCGGGCCHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCcccccccC-CcccccccCCccccChhhhcCC
Confidence            999999999999999999999   999999999999999999999999998753221 2223456789999999999999


Q ss_pred             CCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh--hhhhHHHHHHHHHHHHHhhccCCCCCCC-----HHHHH
Q 044846          158 QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS--KEAEKEEVITFAMVAKRCLNLNGKKQPT-----MKEVT  230 (290)
Q Consensus       158 ~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rps-----~~el~  230 (290)
                      .++.++|+|||||++|+|++|.+||...... ........  ...+...+.++.+||.+||+.||.+||+     +.+++
T Consensus       197 ~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~  275 (353)
T 2i0e_A          197 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-ELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK  275 (353)
T ss_dssp             CBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHH
T ss_pred             CcCCcccccchHHHHHHHHcCCCCCCCCCHH-HHHHHHHhCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence            9999999999999999999999988654322 11111111  1122345678999999999999999995     58887


Q ss_pred             HHHH
Q 044846          231 LELA  234 (290)
Q Consensus       231 ~~l~  234 (290)
                      +|.+
T Consensus       276 ~h~~  279 (353)
T 2i0e_A          276 EHAF  279 (353)
T ss_dssp             TSGG
T ss_pred             cCcc
Confidence            7643


No 111
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=7e-42  Score=300.74  Aligned_cols=236  Identities=20%  Similarity=0.310  Sum_probs=189.4

Q ss_pred             CceEEEEeeccc-CchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCC--------
Q 044846            2 EELWLLKKSKSV-HESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDD--------   71 (290)
Q Consensus         2 ~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~--------   71 (290)
                      ++.||+|+++.. .....+.+.+|+++++.+ +||||+++++++...+..++||||+++|+|.+++......        
T Consensus        67 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~  146 (334)
T 2pvf_A           67 AVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI  146 (334)
T ss_dssp             -CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--
T ss_pred             ceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccc
Confidence            457999998753 345577899999999999 9999999999999999999999999999999999875421        


Q ss_pred             ----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCc-eeeccceecc
Q 044846           72 ----QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT-HLTTQVKVTF  146 (290)
Q Consensus        72 ----~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~g~~  146 (290)
                          ...+++..++.++.||+.||.|||+++   |+||||||+||+++.++.+||+|||+++....... .......+++
T Consensus       147 ~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~  223 (334)
T 2pvf_A          147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV  223 (334)
T ss_dssp             ------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCG
T ss_pred             cccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCccc
Confidence                124889999999999999999999999   99999999999999999999999999865433221 1223345678


Q ss_pred             cccCccccccCCCCCcccchhhHHHHHHHhc-CCCCcccchhhhh--hhHHHhhhhhhHHHHHHHHHHHHHhhccCCCCC
Q 044846          147 GYVDPKYFRSSQFTEKSDVYSFSVVLVELNW-TKPIHLVDVEENR--SLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQ  223 (290)
Q Consensus       147 ~y~aPE~~~~~~~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  223 (290)
                      .|+|||++.+..++.++||||||+++|+|++ |..|+........  .+........+...+..+.+++.+||+.||.+|
T Consensus       224 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R  303 (334)
T 2pvf_A          224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQR  303 (334)
T ss_dssp             GGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             ceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhC
Confidence            8999999998889999999999999999998 8777754322111  111111112223456679999999999999999


Q ss_pred             CCHHHHHHHHHhhHhhh
Q 044846          224 PTMKEVTLELAGIRASI  240 (290)
Q Consensus       224 ps~~el~~~l~~~~~~~  240 (290)
                      ||+.|++++|+.+....
T Consensus       304 ps~~ell~~L~~l~~~~  320 (334)
T 2pvf_A          304 PTFKQLVEDLDRILTLT  320 (334)
T ss_dssp             CCHHHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHhcc
Confidence            99999999999987654


No 112
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.9e-42  Score=299.46  Aligned_cols=207  Identities=20%  Similarity=0.256  Sum_probs=167.3

Q ss_pred             HHHHHHHHHHHHhcCCCceeeEEeEEEe--CCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 044846           18 VEQFINEVVILSQINHRNVVKILGCCLE--TEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLH   95 (290)
Q Consensus        18 ~~~~~~E~~~l~~l~Hpniv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~ylH   95 (290)
                      .+.+.+|+++++.++||||+++++++..  .+..++||||+++|+|.+++...     .+++..++.++.||+.||.|||
T Consensus        80 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH  154 (298)
T 2zv2_A           80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK-----PLSEDQARFYFQDLIKGIEYLH  154 (298)
T ss_dssp             -CHHHHHHHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS-----CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHH
Confidence            4578999999999999999999999987  56789999999999998765422     5899999999999999999999


Q ss_pred             hCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCC---CCCcccchhhHHHH
Q 044846           96 SVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ---FTEKSDVYSFSVVL  172 (290)
Q Consensus        96 ~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~~DiwS~G~il  172 (290)
                      +++   |+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+..   ++.++|||||||++
T Consensus       155 ~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l  230 (298)
T 2zv2_A          155 YQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD-ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL  230 (298)
T ss_dssp             HTT---EECCCCCGGGEEECTTSCEEECCCTTCEECSSSS-CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHH
T ss_pred             HCC---eeccCCCHHHEEECCCCCEEEecCCCcccccccc-ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHH
Confidence            999   9999999999999999999999999987543322 2234467899999999998765   36789999999999


Q ss_pred             HHHhcCCCCcccchhhhhhhHHHhh----hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          173 VELNWTKPIHLVDVEENRSLAAYFS----KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       173 ~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      |+|++|..||........ ......    .+.....+..+.+||.+||+.||++|||+.|+++|.+
T Consensus       231 ~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~  295 (298)
T 2zv2_A          231 YCFVFGQCPFMDERIMCL-HSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPW  295 (298)
T ss_dssp             HHHHHSSCSSCCSSHHHH-HHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHH
T ss_pred             HHHHHCCCCCCCccHHHH-HHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcc
Confidence            999999998865432211 111101    1111234567999999999999999999999987754


No 113
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=2.4e-42  Score=304.63  Aligned_cols=230  Identities=19%  Similarity=0.156  Sum_probs=178.7

Q ss_pred             CceEEEEeeccc-----CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCC-----
Q 044846            2 EELWLLKKSKSV-----HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDD-----   71 (290)
Q Consensus         2 ~~~~avK~~~~~-----~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-----   71 (290)
                      |+.||+|+++..     .....+.+.+|+++++.++||||+++++++...+..++|||||++|+|.+++......     
T Consensus        51 ~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~  130 (345)
T 3hko_A           51 RAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKC  130 (345)
T ss_dssp             CCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEE
T ss_pred             CceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhccccccc
Confidence            567999988642     4556788999999999999999999999999999999999999999999999531100     


Q ss_pred             -------------------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCC--
Q 044846           72 -------------------------------QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY--  118 (290)
Q Consensus        72 -------------------------------~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~--  118 (290)
                                                     ...+++..++.++.||+.||.|||+++   |+||||||+||+++.++  
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~  207 (345)
T 3hko_A          131 AMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG---ICHRDIKPENFLFSTNKSF  207 (345)
T ss_dssp             EEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSC
T ss_pred             ccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEecCCCc
Confidence                                           112456778899999999999999999   99999999999998776  


Q ss_pred             cEEEeccccccccccCCc---eeeccceecccccCcccccc--CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhH
Q 044846          119 QAKISDFRTFKSRAIDRT---HLTTQVKVTFGYVDPKYFRS--SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLA  193 (290)
Q Consensus       119 ~~kl~dfg~~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~--~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~  193 (290)
                      .+||+|||+++.......   .......||+.|+|||++.+  ..++.++|||||||++|+|++|..||...........
T Consensus       208 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~  287 (345)
T 3hko_A          208 EIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQ  287 (345)
T ss_dssp             CEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             eEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHH
Confidence            899999999875332111   12345678999999999875  6788999999999999999999998865433222111


Q ss_pred             HHhh-----hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          194 AYFS-----KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       194 ~~~~-----~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      ....     .......+..+.+||.+||+.||.+|||+.+++++.+
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~  333 (345)
T 3hko_A          288 VLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPW  333 (345)
T ss_dssp             HHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHH
T ss_pred             HHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChh
Confidence            1111     1122234678999999999999999999999998754


No 114
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=5.9e-42  Score=295.91  Aligned_cols=232  Identities=20%  Similarity=0.291  Sum_probs=187.5

Q ss_pred             eEEEEeeccc-CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcc-eEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            4 LWLLKKSKSV-HESNVEQFINEVVILSQINHRNVVKILGCCLETEVP-LLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         4 ~~avK~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~-~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      .||+|+++.. .....+.+.+|+.+++.++||||+++++++...+.. ++||||+.+|+|.+++.....   .+++..+.
T Consensus        51 ~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~---~~~~~~~~  127 (298)
T 3pls_A           51 QCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQR---NPTVKDLI  127 (298)
T ss_dssp             EEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTC---CCBHHHHH
T ss_pred             eeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhcccc---CCCHHHHH
Confidence            6899998753 345577899999999999999999999999876655 999999999999999986432   58899999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCC---ceeeccceecccccCccccccCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDR---THLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .++.|++.||.|||+++   |+||||||+||+++.++.+||+|||+++......   ........+++.|+|||.+.+..
T Consensus       128 ~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  204 (298)
T 3pls_A          128 SFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYR  204 (298)
T ss_dssp             HHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCC
Confidence            99999999999999999   9999999999999999999999999986433211   12223456788999999999999


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh---hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS---KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAG  235 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~  235 (290)
                      ++.++||||||+++|+|++|..++...............   ...+...+..+.+++.+||+.||.+|||+.++++.|+.
T Consensus       205 ~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~  284 (298)
T 3pls_A          205 FTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQ  284 (298)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            999999999999999999966555433322222111111   12223345679999999999999999999999999999


Q ss_pred             hHhhhC
Q 044846          236 IRASIG  241 (290)
Q Consensus       236 ~~~~~~  241 (290)
                      +.....
T Consensus       285 ~~~~l~  290 (298)
T 3pls_A          285 IVSALL  290 (298)
T ss_dssp             HHHHCC
T ss_pred             HHHHHh
Confidence            887653


No 115
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=1.5e-42  Score=304.17  Aligned_cols=227  Identities=18%  Similarity=0.192  Sum_probs=182.2

Q ss_pred             CceEEEEeeccc--CchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSV--HESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|+++..  .......+.+|+.+++.+ .||||+++++++...+..++||||+.+|+|.+++......  .+++.
T Consensus        54 ~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~--~~~~~  131 (327)
T 3lm5_A           54 GQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAE--MVSEN  131 (327)
T ss_dssp             CCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-C--CCCHH
T ss_pred             CCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhccc--CCCHH
Confidence            678999998642  334477899999999999 5799999999999999999999999999999998654322  58999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEecc---CCcEEEeccccccccccCCceeeccceecccccCccccc
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD---KYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFR  155 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~  155 (290)
                      .++.++.|++.||.|||+++   |+||||||+||+++.   ++.+||+|||+++....  ........||+.|+|||++.
T Consensus       132 ~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~--~~~~~~~~gt~~y~aPE~~~  206 (327)
T 3lm5_A          132 DVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH--ACELREIMGTPEYLAPEILN  206 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-----------CCCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcEEEeeCccccccCC--ccccccccCCcCccCCeeec
Confidence            99999999999999999999   999999999999987   78999999999865432  12223457899999999999


Q ss_pred             cCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHh-----hhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHH
Q 044846          156 SSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYF-----SKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVT  230 (290)
Q Consensus       156 ~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~  230 (290)
                      +..++.++||||||+++|+|++|..||..............     ........+..+.+||.+||+.||.+|||+++++
T Consensus       207 ~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll  286 (327)
T 3lm5_A          207 YDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICL  286 (327)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence            99999999999999999999999998865433222111110     1112234566799999999999999999999999


Q ss_pred             HHHHh
Q 044846          231 LELAG  235 (290)
Q Consensus       231 ~~l~~  235 (290)
                      ++.+-
T Consensus       287 ~h~~~  291 (327)
T 3lm5_A          287 SHSWL  291 (327)
T ss_dssp             TCGGG
T ss_pred             CCHhh
Confidence            87553


No 116
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=4.1e-42  Score=299.26  Aligned_cols=236  Identities=22%  Similarity=0.277  Sum_probs=189.1

Q ss_pred             CceEEEEeecccC-chhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCC-cceEEEEeCCCCCHHHHHhhcCCC-------
Q 044846            2 EELWLLKKSKSVH-ESNVEQFINEVVILSQI-NHRNVVKILGCCLETE-VPLLVYEFIPNGSLYQYIHEQTDD-------   71 (290)
Q Consensus         2 ~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~-------   71 (290)
                      |+.||+|+++... ....+.+.+|++++..+ +||||+++++++...+ ..++||||+++|+|.+++......       
T Consensus        57 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  136 (316)
T 2xir_A           57 CRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA  136 (316)
T ss_dssp             EEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC---
T ss_pred             ceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhccccccccccc
Confidence            4679999997533 44567899999999999 7999999999998754 589999999999999999875431       


Q ss_pred             -----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCc-eeeccceec
Q 044846           72 -----QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT-HLTTQVKVT  145 (290)
Q Consensus        72 -----~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~g~  145 (290)
                           ...+++..++.++.|++.||.|||+++   |+||||||+||+++.++.+||+|||+++....... .......+|
T Consensus       137 ~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t  213 (316)
T 2xir_A          137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP  213 (316)
T ss_dssp             ----CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEEC
T ss_pred             chhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcc
Confidence                 112789999999999999999999999   99999999999999999999999999875433222 233446678


Q ss_pred             ccccCccccccCCCCCcccchhhHHHHHHHhc-CCCCcccchhhhhhhHHH---hhhhhhHHHHHHHHHHHHHhhccCCC
Q 044846          146 FGYVDPKYFRSSQFTEKSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAY---FSKEAEKEEVITFAMVAKRCLNLNGK  221 (290)
Q Consensus       146 ~~y~aPE~~~~~~~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~cl~~dp~  221 (290)
                      +.|+|||++.+..++.++||||||+++|+|++ |..|+.............   .....+...+..+.+++.+||+.||.
T Consensus       214 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~  293 (316)
T 2xir_A          214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPS  293 (316)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             eeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChh
Confidence            89999999999999999999999999999997 887775432221111111   11112233456799999999999999


Q ss_pred             CCCCHHHHHHHHHhhHhhh
Q 044846          222 KQPTMKEVTLELAGIRASI  240 (290)
Q Consensus       222 ~Rps~~el~~~l~~~~~~~  240 (290)
                      +|||+.|++++|+.+....
T Consensus       294 ~Rps~~ell~~L~~~~~~~  312 (316)
T 2xir_A          294 QRPTFSELVEHLGNLLQAN  312 (316)
T ss_dssp             GSCCHHHHHHHHHHHHHHH
T ss_pred             hCcCHHHHHHHHHHHHhhh
Confidence            9999999999999887643


No 117
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.4e-41  Score=297.02  Aligned_cols=228  Identities=21%  Similarity=0.258  Sum_probs=177.6

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhc--CCCceeeEEeEEEeC----CcceEEEEeCCCCCHHHHHhhcCCCCCCC
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQI--NHRNVVKILGCCLET----EVPLLVYEFIPNGSLYQYIHEQTDDQLPI   75 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l--~Hpniv~~~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~   75 (290)
                      |+.||||++...   ....+.+|.+++..+  +||||+++++++...    ...++||||+++|+|.++++..     .+
T Consensus        60 ~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~  131 (337)
T 3mdy_A           60 GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST-----TL  131 (337)
T ss_dssp             TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHC-----CB
T ss_pred             CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhcc-----CC
Confidence            678999998643   334556677777665  899999999999887    6789999999999999999764     48


Q ss_pred             CHHHHHHHHHHHHHHHHHHhhC--------CCCCeEeccCCCCceEeccCCcEEEeccccccccccCCcee---ecccee
Q 044846           76 TWEMRLRITVEVSRVLSYLHSV--------ASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL---TTQVKV  144 (290)
Q Consensus        76 ~~~~~~~~~~~i~~~l~ylH~~--------~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~g  144 (290)
                      ++..++.++.|++.||.|||++        +   |+||||||+|||++.++.+||+|||+++.........   .....|
T Consensus       132 ~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g  208 (337)
T 3mdy_A          132 DAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA---IAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVG  208 (337)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC---EECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhhhccCCC---EEecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCcc
Confidence            9999999999999999999998        7   9999999999999999999999999986543222211   124578


Q ss_pred             cccccCccccccCCCCCc------ccchhhHHHHHHHhcC----------CCCcccchhhh---hhhHHHh-----h---
Q 044846          145 TFGYVDPKYFRSSQFTEK------SDVYSFSVVLVELNWT----------KPIHLVDVEEN---RSLAAYF-----S---  197 (290)
Q Consensus       145 ~~~y~aPE~~~~~~~~~~------~DiwS~G~il~~l~~~----------~~~~~~~~~~~---~~~~~~~-----~---  197 (290)
                      |+.|+|||++.+..++..      +|||||||++|||++|          ..|+.......   .......     .   
T Consensus       209 t~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (337)
T 3mdy_A          209 TKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSF  288 (337)
T ss_dssp             CGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCC
T ss_pred             CcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccc
Confidence            999999999988776665      9999999999999999          44443211110   0111100     0   


Q ss_pred             --hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhHhhh
Q 044846          198 --KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASI  240 (290)
Q Consensus       198 --~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~~~  240 (290)
                        .......+..+.+|+.+||+.||.+|||+.+++++|+.+..+.
T Consensus       289 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~  333 (337)
T 3mdy_A          289 PNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ  333 (337)
T ss_dssp             CGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             cccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence              0112356778999999999999999999999999999988754


No 118
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=1e-41  Score=302.54  Aligned_cols=221  Identities=21%  Similarity=0.243  Sum_probs=179.0

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcC-----CCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCC
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQIN-----HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPIT   76 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~-----Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~   76 (290)
                      |+.||||+++. .....+.+..|+.+++.+.     ||||+++++++...+..++||||+ +++|.+++......  .++
T Consensus        60 ~~~vavK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~--~~~  135 (360)
T 3llt_A           60 KKYYAVKVVRN-IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYN--GFH  135 (360)
T ss_dssp             CCEEEEEEECS-CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTC--CCC
T ss_pred             CeEEEEEEecc-chhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCC--CCC
Confidence            67899999974 3445667788999999996     999999999999999999999999 89999999876533  488


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEecc-------------------------CCcEEEecccccccc
Q 044846           77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD-------------------------KYQAKISDFRTFKSR  131 (290)
Q Consensus        77 ~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~-------------------------~~~~kl~dfg~~~~~  131 (290)
                      +..++.++.||+.||.|||+++   |+||||||+|||++.                         ++.+||+|||+++..
T Consensus       136 ~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~  212 (360)
T 3llt_A          136 IEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFK  212 (360)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEET
T ss_pred             HHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceec
Confidence            9999999999999999999999   999999999999975                         788999999998653


Q ss_pred             ccCCceeeccceecccccCccccccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhh--hHHHhhhh----------
Q 044846          132 AIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRS--LAAYFSKE----------  199 (290)
Q Consensus       132 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~--~~~~~~~~----------  199 (290)
                      ..    ......||+.|+|||++.+..++.++|||||||++|+|++|..||.........  ........          
T Consensus       213 ~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  288 (360)
T 3llt_A          213 SD----YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATK  288 (360)
T ss_dssp             TS----CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTT
T ss_pred             CC----CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhh
Confidence            32    223467899999999999999999999999999999999999988643321110  00000000          


Q ss_pred             -----------------------------------hhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q 044846          200 -----------------------------------AEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLEL  233 (290)
Q Consensus       200 -----------------------------------~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l  233 (290)
                                                         ........+.+||.+||+.||.+|||+.|++++.
T Consensus       289 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp  357 (360)
T 3llt_A          289 TNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHK  357 (360)
T ss_dssp             SGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSG
T ss_pred             ccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCc
Confidence                                               0000125678999999999999999999998764


No 119
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=2.6e-42  Score=302.57  Aligned_cols=223  Identities=19%  Similarity=0.230  Sum_probs=164.7

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~-Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      |+.||+|++..   .....+.+|+.+++.+. ||||+++++++.+....|+||||+++|+|.+++....    .+++..+
T Consensus        36 ~~~vavK~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~  108 (325)
T 3kn6_A           36 NQAFAVKIISK---RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKK----HFSETEA  108 (325)
T ss_dssp             CCEEEEEEEEG---GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHCS----CCCHHHH
T ss_pred             CCEEEEEEECh---hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcC----CCCHHHH
Confidence            67899999864   34556789999999996 9999999999999999999999999999999998754    6899999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCC---cEEEeccccccccccCCceeeccceecccccCccccccC
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY---QAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSS  157 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  157 (290)
                      ..++.||+.||.|||+++   |+||||||+|||++.++   .+||+|||+++...... .......||+.|+|||++.+.
T Consensus       109 ~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~~t~~y~aPE~~~~~  184 (325)
T 3kn6_A          109 SYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-QPLKTPCFTLHYAAPELLNQN  184 (325)
T ss_dssp             HHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----------------------C
T ss_pred             HHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-CcccccCCCcCccCHHHhcCC
Confidence            999999999999999999   99999999999998766   89999999986543222 223345679999999999999


Q ss_pred             CCCCcccchhhHHHHHHHhcCCCCcccchhh------hhhhHHHhh------hhhhHHHHHHHHHHHHHhhccCCCCCCC
Q 044846          158 QFTEKSDVYSFSVVLVELNWTKPIHLVDVEE------NRSLAAYFS------KEAEKEEVITFAMVAKRCLNLNGKKQPT  225 (290)
Q Consensus       158 ~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~------~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~Rps  225 (290)
                      .++.++|||||||++|+|++|..||......      .........      .......+..+.+||.+||+.||.+|||
T Consensus       185 ~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt  264 (325)
T 3kn6_A          185 GYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLK  264 (325)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCC
T ss_pred             CCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCC
Confidence            9999999999999999999999988643221      111111111      1112335678999999999999999999


Q ss_pred             HHHHHHHHHh
Q 044846          226 MKEVTLELAG  235 (290)
Q Consensus       226 ~~el~~~l~~  235 (290)
                      +.|++++.+-
T Consensus       265 ~~ell~h~w~  274 (325)
T 3kn6_A          265 MSGLRYNEWL  274 (325)
T ss_dssp             TTTSTTCGGG
T ss_pred             HHHHhcChhh
Confidence            9999877543


No 120
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=2.7e-42  Score=297.19  Aligned_cols=225  Identities=20%  Similarity=0.256  Sum_probs=176.9

Q ss_pred             CceEEEEeecccC--chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKSVH--ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.||+|+++...  ....+.+.+|+++++.++||||+++++++...+..++||||+. ++|.+++.....   .+++..
T Consensus        26 ~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~---~~~~~~  101 (288)
T 1ob3_A           26 GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCEG---GLESVT  101 (288)
T ss_dssp             SCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS-EEHHHHHHTSTT---CCCHHH
T ss_pred             CCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecC-CCHHHHHHhccc---CCCHHH
Confidence            6789999986533  2335678899999999999999999999999999999999996 599999976432   588999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccC-C
Q 044846           80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSS-Q  158 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~  158 (290)
                      +..++.|++.||.|||+++   |+||||||+||+++.++.+||+|||+++...... .......||+.|+|||++.+. .
T Consensus       102 ~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~  177 (288)
T 1ob3_A          102 AKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPV-RKYTHEIVTLWYRAPDVLMGSKK  177 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----------CCCTTCCHHHHTTCCS
T ss_pred             HHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCccc-cccccccccccccCchheeCCCC
Confidence            9999999999999999999   9999999999999999999999999986543221 122345679999999998764 5


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHH--hhh----------------------------hhhHHHHHHH
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAY--FSK----------------------------EAEKEEVITF  208 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~--~~~----------------------------~~~~~~~~~~  208 (290)
                      ++.++|||||||++|+|++|.+||.............  ...                            ......+..+
T Consensus       178 ~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (288)
T 1ob3_A          178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESG  257 (288)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHH
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHH
Confidence            8999999999999999999999886543221111100  000                            0001235678


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          209 AMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       209 ~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      .+||.+||+.||++|||+.|++++.+
T Consensus       258 ~~li~~~L~~dP~~Rpt~~e~l~hp~  283 (288)
T 1ob3_A          258 IDLLSKMLKLDPNQRITAKQALEHAY  283 (288)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred             HHHHHHHcCCCcccCCCHHHHhcCcc
Confidence            89999999999999999999987654


No 121
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=9.5e-43  Score=316.42  Aligned_cols=227  Identities=15%  Similarity=0.190  Sum_probs=185.6

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|+++..   .....+.+.+|+.++..++||||++++++|.+.+..|+|||||++|+|.+++.....   .+++.
T Consensus        99 ~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~---~l~e~  175 (437)
T 4aw2_A           99 DKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFED---RLPEE  175 (437)
T ss_dssp             TEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTT---CCCHH
T ss_pred             CcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccC---CCCHH
Confidence            578999998642   222334588999999999999999999999999999999999999999999986432   58999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccc---
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFR---  155 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---  155 (290)
                      .++.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++..............||+.|+|||++.   
T Consensus       176 ~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~  252 (437)
T 4aw2_A          176 MARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAME  252 (437)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcc
Confidence            99999999999999999999   999999999999999999999999998765444444445568999999999987   


Q ss_pred             --cCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh----hhh---HHHHHHHHHHHHHhhccCCCC--CC
Q 044846          156 --SSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK----EAE---KEEVITFAMVAKRCLNLNGKK--QP  224 (290)
Q Consensus       156 --~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~li~~cl~~dp~~--Rp  224 (290)
                        ...++.++|||||||++|||++|.+||........ .......    ..+   ...+..+.+||.+||..+|++  ||
T Consensus       253 ~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~-~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~  331 (437)
T 4aw2_A          253 GGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET-YGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQN  331 (437)
T ss_dssp             TSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTT
T ss_pred             cCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH-HHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCC
Confidence              45689999999999999999999999875432211 1111110    111   125678999999999988888  99


Q ss_pred             CHHHHHHHHHh
Q 044846          225 TMKEVTLELAG  235 (290)
Q Consensus       225 s~~el~~~l~~  235 (290)
                      +++|+++|.+.
T Consensus       332 ~~~eil~Hpff  342 (437)
T 4aw2_A          332 GIEDFKKHPFF  342 (437)
T ss_dssp             TTHHHHTSGGG
T ss_pred             CHHHHhCCCcc
Confidence            99999988654


No 122
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=3.7e-42  Score=303.93  Aligned_cols=229  Identities=15%  Similarity=0.147  Sum_probs=182.5

Q ss_pred             CceEEEEeecccCch-----------hHHHHHHHHHHHHhcCCCceeeEEeEEEe----CCcceEEEEeCCCCCHHHHHh
Q 044846            2 EELWLLKKSKSVHES-----------NVEQFINEVVILSQINHRNVVKILGCCLE----TEVPLLVYEFIPNGSLYQYIH   66 (290)
Q Consensus         2 ~~~~avK~~~~~~~~-----------~~~~~~~E~~~l~~l~Hpniv~~~~~~~~----~~~~~lv~e~~~~g~L~~~l~   66 (290)
                      ++.||+|+.......           ....+.+|+..++.++||||+++++++..    ....++||||+ +++|.+++.
T Consensus        65 ~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~  143 (345)
T 2v62_A           65 DARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISG  143 (345)
T ss_dssp             GCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCB
T ss_pred             cceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHH
Confidence            467899998754322           12346678889999999999999999988    67899999999 999999998


Q ss_pred             hcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCC--cEEEeccccccccccCCc------ee
Q 044846           67 EQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY--QAKISDFRTFKSRAIDRT------HL  138 (290)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~--~~kl~dfg~~~~~~~~~~------~~  138 (290)
                      ...    .+++..++.++.||+.||.|||+++   |+||||||+|||++.++  .+||+|||+++.......      ..
T Consensus       144 ~~~----~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~  216 (345)
T 2v62_A          144 QNG----TFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENP  216 (345)
T ss_dssp             GGG----BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCG
T ss_pred             hcC----CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhcc
Confidence            765    6899999999999999999999999   99999999999999887  999999999865432211      11


Q ss_pred             eccceecccccCccccccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhh---HHHhhhhhhH---------HHHH
Q 044846          139 TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSL---AAYFSKEAEK---------EEVI  206 (290)
Q Consensus       139 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~---------~~~~  206 (290)
                      .....||..|+|||++.+..++.++|||||||++|+|++|..||..........   ........+.         ..+.
T Consensus       217 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (345)
T 2v62_A          217 RKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCC  296 (345)
T ss_dssp             GGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCH
T ss_pred             ccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHH
Confidence            134578999999999999999999999999999999999999885432211111   1111111111         3445


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHHHHhhHh
Q 044846          207 TFAMVAKRCLNLNGKKQPTMKEVTLELAGIRA  238 (290)
Q Consensus       207 ~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~  238 (290)
                      .+.++|.+||+.||++|||+.++++.|+.+..
T Consensus       297 ~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~  328 (345)
T 2v62_A          297 EIAQFLVCAHSLAYDEKPNYQALKKILNPHGI  328 (345)
T ss_dssp             HHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred             HHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence            89999999999999999999999999987643


No 123
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=6.3e-42  Score=313.79  Aligned_cols=220  Identities=19%  Similarity=0.243  Sum_probs=174.0

Q ss_pred             CceEEEEeeccc--CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC------cceEEEEeCCCCCHHHHHhhcCCCCC
Q 044846            2 EELWLLKKSKSV--HESNVEQFINEVVILSQINHRNVVKILGCCLETE------VPLLVYEFIPNGSLYQYIHEQTDDQL   73 (290)
Q Consensus         2 ~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~------~~~lv~e~~~~g~L~~~l~~~~~~~~   73 (290)
                      |+.||||++...  .....+++.+|+.+|+.++||||+++++++...+      ..||||||+.+ +|.+.+..      
T Consensus        87 ~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~-~l~~~~~~------  159 (464)
T 3ttj_A           87 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQM------  159 (464)
T ss_dssp             TEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSE-EHHHHHTS------
T ss_pred             CCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCCC-CHHHHHhh------
Confidence            678999999643  4555778999999999999999999999997654      45999999964 67777753      


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccc
Q 044846           74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKY  153 (290)
Q Consensus        74 ~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~  153 (290)
                      .+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++....  ........||+.|+|||+
T Consensus       160 ~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~--~~~~~~~~gt~~y~aPE~  234 (464)
T 3ttj_A          160 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV  234 (464)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC-------CCCC----CCCTTCCHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEeeeecCC--CcccCCCcccccccCHHH
Confidence            3788999999999999999999999   99999999999999999999999999865432  223345678999999999


Q ss_pred             cccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------------------------------------
Q 044846          154 FRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------------------------------------  197 (290)
Q Consensus       154 ~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------------------------------------  197 (290)
                      +.+..|+.++||||+||++|+|++|.+||........ +.....                                    
T Consensus       235 ~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~-~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (464)
T 3ttj_A          235 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLF  313 (464)
T ss_dssp             HTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHS
T ss_pred             HcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhC
Confidence            9999999999999999999999999998865432111 100000                                    


Q ss_pred             --------hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          198 --------KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       198 --------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                              .......+..+.+||.+||+.||++|||++|+++|.+
T Consensus       314 ~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~  358 (464)
T 3ttj_A          314 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY  358 (464)
T ss_dssp             CGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred             cccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChh
Confidence                    0011122567899999999999999999999998854


No 124
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=2.8e-42  Score=326.93  Aligned_cols=231  Identities=22%  Similarity=0.270  Sum_probs=184.8

Q ss_pred             CceEEEEeeccc--CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKSV--HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      ++.||||+++..  +....+.+.+|+++|+.++|||||++++++.. +..++|||||++|+|.+++....    .+++..
T Consensus       396 ~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~----~l~~~~  470 (635)
T 4fl3_A          396 VKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNR----HVKDKN  470 (635)
T ss_dssp             EEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHHHCT----TCCHHH
T ss_pred             ceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCCCCHHHHHhhCC----CCCHHH
Confidence            467999999753  34457889999999999999999999999964 56789999999999999998654    589999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCc--eeeccceecccccCccccccC
Q 044846           80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT--HLTTQVKVTFGYVDPKYFRSS  157 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~  157 (290)
                      ++.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++.......  .......+|+.|+|||++.+.
T Consensus       471 ~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~  547 (635)
T 4fl3_A          471 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY  547 (635)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCC
Confidence            9999999999999999999   99999999999999999999999999875443222  122334567889999999999


Q ss_pred             CCCCcccchhhHHHHHHHhc-CCCCcccchhhhh--hhHHHhhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          158 QFTEKSDVYSFSVVLVELNW-TKPIHLVDVEENR--SLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       158 ~~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      .++.++|||||||++|||++ |..||........  .+........+..++..+.+||.+||+.||++|||+.+|++.|+
T Consensus       548 ~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~  627 (635)
T 4fl3_A          548 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR  627 (635)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence            99999999999999999998 8888764432211  11111112223456678999999999999999999999999999


Q ss_pred             hhHhhh
Q 044846          235 GIRASI  240 (290)
Q Consensus       235 ~~~~~~  240 (290)
                      .+...+
T Consensus       628 ~~~~~l  633 (635)
T 4fl3_A          628 NYYYDV  633 (635)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            876543


No 125
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.6e-42  Score=309.39  Aligned_cols=231  Identities=23%  Similarity=0.338  Sum_probs=177.1

Q ss_pred             eEEEEeecc-cCchhHHHHHHHHHHHHhcCCCceeeEEeEEEe-CCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            4 LWLLKKSKS-VHESNVEQFINEVVILSQINHRNVVKILGCCLE-TEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         4 ~~avK~~~~-~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      .||+|.++. ......+.+.+|+.+++.++||||+++++++.. .+..++||||+++|+|.+++.....   .+++..+.
T Consensus       119 ~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~  195 (373)
T 3c1x_A          119 HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH---NPTVKDLI  195 (373)
T ss_dssp             EEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTC---CCBHHHHH
T ss_pred             EEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhccc---CCCHHHHH
Confidence            578998864 345567889999999999999999999998754 5688999999999999999976543   57889999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCc---eeeccceecccccCccccccCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT---HLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++.......   .......+++.|+|||++.+..
T Consensus       196 ~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  272 (373)
T 3c1x_A          196 GFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK  272 (373)
T ss_dssp             HHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC---------------------CCGGGSCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCC
Confidence            99999999999999999   99999999999999999999999999875432211   1123345678899999999999


Q ss_pred             CCCcccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHhh---hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          159 FTEKSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYFS---KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      ++.++|||||||++|+|++ |.+|+.... ..........   ...+...+..+.++|.+||+.||++|||+.|++++|+
T Consensus       273 ~~~~~DvwSlG~il~ellt~~~~p~~~~~-~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~  351 (373)
T 3c1x_A          273 FTTKSDVWSFGVLLWELMTRGAPPYPDVN-TFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS  351 (373)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCSCTTSC-SSCHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHhCcCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            9999999999999999999 555553322 1111111111   1122345667999999999999999999999999999


Q ss_pred             hhHhhhC
Q 044846          235 GIRASIG  241 (290)
Q Consensus       235 ~~~~~~~  241 (290)
                      .+.....
T Consensus       352 ~i~~~~~  358 (373)
T 3c1x_A          352 AIFSTFI  358 (373)
T ss_dssp             HHHHTCC
T ss_pred             HHHHhcc
Confidence            9887653


No 126
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=3.2e-42  Score=304.76  Aligned_cols=223  Identities=23%  Similarity=0.281  Sum_probs=182.6

Q ss_pred             CceEEEEeecccC---chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSVH---ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||||++....   ....+.+.+|+++++.++||||+++++++...+..++||||+. |+|.+++.....   .+++.
T Consensus        79 ~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-g~l~~~l~~~~~---~l~~~  154 (348)
T 1u5q_A           79 SEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKK---PLQEV  154 (348)
T ss_dssp             TEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHHTS---CCCHH
T ss_pred             CeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-CCHHHHHHHhcC---CCCHH
Confidence            6789999986432   3345678999999999999999999999999999999999996 689988865443   58999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccc---
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFR---  155 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---  155 (290)
                      .+..++.|++.||.|||+++   |+||||||+|||++.++.+||+|||++.....     .....||+.|+|||++.   
T Consensus       155 ~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-----~~~~~gt~~y~aPE~~~~~~  226 (348)
T 1u5q_A          155 EIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-----ANSFVGTPYWMAPEVILAMD  226 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-----BCCCCSCGGGCCHHHHHTTS
T ss_pred             HHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCC-----CCcccCCcceeCHhhhcccc
Confidence            99999999999999999999   99999999999999999999999999765332     23456899999999985   


Q ss_pred             cCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh----hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 044846          156 SSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK----EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTL  231 (290)
Q Consensus       156 ~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~  231 (290)
                      ...++.++|||||||++|+|++|.+|+.......... .....    ......+..+.+||.+||+.||++|||+.++++
T Consensus       227 ~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          227 EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-HIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             SCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            5678899999999999999999999886543322211 11111    112234567899999999999999999999998


Q ss_pred             HHHhhH
Q 044846          232 ELAGIR  237 (290)
Q Consensus       232 ~l~~~~  237 (290)
                      +.+...
T Consensus       306 h~~~~~  311 (348)
T 1u5q_A          306 HRFVLR  311 (348)
T ss_dssp             CHHHHS
T ss_pred             Chhhhc
Confidence            876543


No 127
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=8.3e-42  Score=295.23  Aligned_cols=231  Identities=24%  Similarity=0.365  Sum_probs=183.2

Q ss_pred             eEEEEeecc-cCchhHHHHHHHHHHHHhcCCCceeeEEeEEE-eCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            4 LWLLKKSKS-VHESNVEQFINEVVILSQINHRNVVKILGCCL-ETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         4 ~~avK~~~~-~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      .||+|+++. ......+.+.+|+.++++++||||+++++++. ..+..++||||+.+|+|.+++.....   .+++..++
T Consensus        55 ~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~  131 (298)
T 3f66_A           55 HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH---NPTVKDLI  131 (298)
T ss_dssp             EEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTC---CCCHHHHH
T ss_pred             EEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhccc---CCCHHHHH
Confidence            478898875 33455778999999999999999999999865 45688999999999999999976432   57899999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCc---eeeccceecccccCccccccCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT---HLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .++.|++.||.|||+++   |+||||||+||+++.++.+||+|||+++.......   .......+|+.|+|||.+.+..
T Consensus       132 ~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  208 (298)
T 3f66_A          132 GFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK  208 (298)
T ss_dssp             HHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCC
Confidence            99999999999999999   99999999999999999999999999875432211   1223456778899999999999


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh---hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS---KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAG  235 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~  235 (290)
                      ++.++||||||+++|+|++|..++...............   ...+...+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus       209 ~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~  288 (298)
T 3f66_A          209 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA  288 (298)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            999999999999999999955444433222221111111   11223345679999999999999999999999999998


Q ss_pred             hHhhh
Q 044846          236 IRASI  240 (290)
Q Consensus       236 ~~~~~  240 (290)
                      +....
T Consensus       289 ~~~~~  293 (298)
T 3f66_A          289 IFSTF  293 (298)
T ss_dssp             HHHTS
T ss_pred             HHHhh
Confidence            87654


No 128
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=7.8e-42  Score=293.87  Aligned_cols=225  Identities=24%  Similarity=0.416  Sum_probs=179.3

Q ss_pred             CceEEEEeecccCchh-------HHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCC
Q 044846            2 EELWLLKKSKSVHESN-------VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP   74 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~-------~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~   74 (290)
                      |+.||+|++.......       .+.+.+|+.+++.++||||+++++++....  ++||||+++|+|.+++.....   .
T Consensus        44 ~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~---~  118 (287)
T 4f0f_A           44 KSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAH---P  118 (287)
T ss_dssp             CCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEECCTTCBHHHHHHCTTS---C
T ss_pred             ceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEEecCCCCHHHHHhcccC---C
Confidence            6789999986433221       167899999999999999999999986554  799999999999999876543   5


Q ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCc-----EEEeccccccccccCCceeeccceeccccc
Q 044846           75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ-----AKISDFRTFKSRAIDRTHLTTQVKVTFGYV  149 (290)
Q Consensus        75 ~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~-----~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~  149 (290)
                      +++..++.++.|++.||.|||+++. +|+||||||+||+++.++.     +||+|||+++....    ......|++.|+
T Consensus       119 ~~~~~~~~~~~~l~~~l~~lH~~~~-~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~----~~~~~~g~~~y~  193 (287)
T 4f0f_A          119 IKWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH----SVSGLLGNFQWM  193 (287)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTSSS-CCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSS----CEECCCCCCTTS
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhCCC-CeecCCCCcceEEEeccCCCCceeEEeCCCCccccccc----cccccCCCcccc
Confidence            8999999999999999999999863 3999999999999988776     99999999764321    233467899999


Q ss_pred             Cccccc--cCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHh-----hhhhhHHHHHHHHHHHHHhhccCCCC
Q 044846          150 DPKYFR--SSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYF-----SKEAEKEEVITFAMVAKRCLNLNGKK  222 (290)
Q Consensus       150 aPE~~~--~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~cl~~dp~~  222 (290)
                      |||++.  ...++.++|||||||++|+|++|..||..............     ....+...+..+.++|.+||+.||.+
T Consensus       194 aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~  273 (287)
T 4f0f_A          194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKK  273 (287)
T ss_dssp             CGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             CchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhh
Confidence            999984  44578899999999999999999998864332222111111     11223345677999999999999999


Q ss_pred             CCCHHHHHHHHHhh
Q 044846          223 QPTMKEVTLELAGI  236 (290)
Q Consensus       223 Rps~~el~~~l~~~  236 (290)
                      |||+.|+++.|+.+
T Consensus       274 Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          274 RPHFSYIVKELSEL  287 (287)
T ss_dssp             SCCHHHHHHHHHTC
T ss_pred             CcCHHHHHHHHHhC
Confidence            99999999998753


No 129
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=9.5e-42  Score=300.14  Aligned_cols=227  Identities=19%  Similarity=0.202  Sum_probs=186.7

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|++...   .....+.+.+|+.+++.++||||+++++++...+..++||||+.+++|.+++....    .+++.
T Consensus        66 ~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~----~l~~~  141 (335)
T 2owb_A           66 KEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK----ALTEP  141 (335)
T ss_dssp             CCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHC----SCCHH
T ss_pred             CCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhccC----CCCHH
Confidence            578999998642   34567789999999999999999999999999999999999999999999998764    58999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCC
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .++.++.||+.||.|||+++   |+||||||+||+++.++.+||+|||++....... .......|+..|+|||++.+..
T Consensus       142 ~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~  217 (335)
T 2owb_A          142 EARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-ERKKVLCGTPNYIAPEVLSKKG  217 (335)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCSTT-CCBCCCCSCCSSCCHHHHHTSC
T ss_pred             HHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecccCc-ccccccCCCccccCHHHhccCC
Confidence            99999999999999999999   9999999999999999999999999986543221 2223456889999999999989


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHH-hhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAY-FSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGI  236 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~  236 (290)
                      ++.++||||||+++|+|++|..+|............. .....+...+..+.+||.+||+.||++|||+.|++++.+..
T Consensus       218 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~  296 (335)
T 2owb_A          218 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFT  296 (335)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHH
T ss_pred             CCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccc
Confidence            9999999999999999999999886543222111110 01111223456788999999999999999999999876543


No 130
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=3.6e-42  Score=292.98  Aligned_cols=227  Identities=20%  Similarity=0.299  Sum_probs=184.2

Q ss_pred             CceEEEEeeccc--CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeC--CcceEEEEeCCCCCHHHHHhhcCCCCCCCCH
Q 044846            2 EELWLLKKSKSV--HESNVEQFINEVVILSQINHRNVVKILGCCLET--EVPLLVYEFIPNGSLYQYIHEQTDDQLPITW   77 (290)
Q Consensus         2 ~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~   77 (290)
                      |+.||+|+++..  .....+.+.+|+.+++.++||||+++++++...  +..++||||+++|+|.+++.....  ..+++
T Consensus        33 ~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~  110 (271)
T 3kmu_A           33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTN--FVVDQ  110 (271)
T ss_dssp             TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSS--CCCCH
T ss_pred             CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhccc--CCCCH
Confidence            567999998753  345567899999999999999999999999887  788999999999999999986543  25899


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccC
Q 044846           78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSS  157 (290)
Q Consensus        78 ~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  157 (290)
                      ..++.++.|++.||.|||+++.. |+||||||+||+++.++.++|+|||++....      .....||+.|+|||++.+.
T Consensus       111 ~~~~~i~~qi~~~l~~lH~~~~~-i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~------~~~~~~t~~y~aPE~~~~~  183 (271)
T 3kmu_A          111 SQAVKFALDMARGMAFLHTLEPL-IPRHALNSRSVMIDEDMTARISMADVKFSFQ------SPGRMYAPAWVAPEALQKK  183 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSSSC-CTTCCCSGGGEEECTTSCEEEEGGGSCCTTS------CTTCBSCGGGSCHHHHHSC
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCc-eecCCCccceEEEcCCcceeEEeccceeeec------ccCccCCccccChhhhccC
Confidence            99999999999999999997643 9999999999999999999999888754322      2235678999999999876


Q ss_pred             CCCC---cccchhhHHHHHHHhcCCCCcccchhhhhhhHHH---hhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 044846          158 QFTE---KSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAY---FSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTL  231 (290)
Q Consensus       158 ~~~~---~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~  231 (290)
                      .++.   ++||||||+++|+|++|..|+.............   .....+...+..+.+++.+||+.||++|||+.++++
T Consensus       184 ~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          184 PEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             GGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            5544   7999999999999999999886443322211111   111223345677999999999999999999999999


Q ss_pred             HHHhhH
Q 044846          232 ELAGIR  237 (290)
Q Consensus       232 ~l~~~~  237 (290)
                      .|+.+.
T Consensus       264 ~L~~l~  269 (271)
T 3kmu_A          264 ILEKMQ  269 (271)
T ss_dssp             HHHHHC
T ss_pred             HHHHhh
Confidence            998774


No 131
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=5.7e-43  Score=307.98  Aligned_cols=224  Identities=18%  Similarity=0.184  Sum_probs=182.9

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|++...   .......+.+|+.+++.++||||+++++++...+..++||||+ +|+|.+++....    .+++.
T Consensus        34 ~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l~~~l~~~~----~l~~~  108 (336)
T 3h4j_B           34 QQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKK----RMTED  108 (336)
T ss_dssp             CCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CEEHHHHHHHHC----SCCHH
T ss_pred             CCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CCcHHHHHHHcC----CCCHH
Confidence            678999998642   1223457889999999999999999999999999999999999 789999998765    58999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCC
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .++.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++......  .......||+.|+|||++.+..
T Consensus       109 ~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~--~~~~~~~gt~~y~aPE~~~~~~  183 (336)
T 3h4j_B          109 EGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG--NFLKTSCGSPNYAAPEVINGKL  183 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS--BTTCCCTTSTTTSCGGGSCCSG
T ss_pred             HHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccCC--cccccccCCcCcCCHHHHcCCC
Confidence            99999999999999999999   999999999999999999999999998654322  2234456899999999998877


Q ss_pred             C-CCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHh--hhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 044846          159 F-TEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYF--SKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAG  235 (290)
Q Consensus       159 ~-~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~  235 (290)
                      + +.++|||||||++|+|++|..||........ .....  ....+...+..+.+||.+||+.||.+|||+.|++++.+.
T Consensus       184 ~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~  262 (336)
T 3h4j_B          184 YAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-FKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWF  262 (336)
T ss_dssp             GGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-BCCCCSSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHH
T ss_pred             CCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-HHHHHcCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhh
Confidence            6 6799999999999999999998864322111 00000  011122345678999999999999999999999988764


Q ss_pred             h
Q 044846          236 I  236 (290)
Q Consensus       236 ~  236 (290)
                      .
T Consensus       263 ~  263 (336)
T 3h4j_B          263 N  263 (336)
T ss_dssp             H
T ss_pred             c
Confidence            3


No 132
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=5.8e-42  Score=293.81  Aligned_cols=225  Identities=23%  Similarity=0.327  Sum_probs=183.2

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEe----------------CCcceEEEEeCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLE----------------TEVPLLVYEFIPNGSLYQYI   65 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~----------------~~~~~lv~e~~~~g~L~~~l   65 (290)
                      |+.||+|+++...    +.+.+|+++++.++||||+++++++..                ....++||||+++|+|.+++
T Consensus        36 ~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l  111 (284)
T 2a19_B           36 GKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI  111 (284)
T ss_dssp             CCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHH
T ss_pred             CeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHH
Confidence            6789999997543    246789999999999999999999864                34579999999999999999


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceec
Q 044846           66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT  145 (290)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~  145 (290)
                      ......  .+++..++.++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++......  .......|+
T Consensus       112 ~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~  184 (284)
T 2a19_B          112 EKRRGE--KLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND--GKRTRSKGT  184 (284)
T ss_dssp             HHGGGS--CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEESSCC--SCCCCCCSC
T ss_pred             hhccCC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCCEEECcchhheecccc--ccccccCCc
Confidence            765322  5889999999999999999999999   999999999999999999999999997654322  122345689


Q ss_pred             ccccCccccccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhhhhhHHHHHHHHHHHHHhhccCCCCCCC
Q 044846          146 FGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPT  225 (290)
Q Consensus       146 ~~y~aPE~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  225 (290)
                      +.|+|||++.+..++.++||||||+++|+|++|..++........   .......+...+..+.++|.+||+.||.+|||
T Consensus       185 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps  261 (284)
T 2a19_B          185 LRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFT---DLRDGIISDIFDKKEKTLLQKLLSKKPEDRPN  261 (284)
T ss_dssp             CTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHH---HHHTTCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             ccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHH---HhhcccccccCCHHHHHHHHHHccCChhhCcC
Confidence            999999999999999999999999999999999987753322111   11111122234567889999999999999999


Q ss_pred             HHHHHHHHHhhHhhh
Q 044846          226 MKEVTLELAGIRASI  240 (290)
Q Consensus       226 ~~el~~~l~~~~~~~  240 (290)
                      +.|++++|+.+....
T Consensus       262 ~~e~l~~l~~~~~~~  276 (284)
T 2a19_B          262 TSEILRTLTVWKKSP  276 (284)
T ss_dssp             HHHHHHHHHHHTC--
T ss_pred             HHHHHHHHHHHhhCC
Confidence            999999999886544


No 133
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=5.2e-42  Score=295.56  Aligned_cols=228  Identities=21%  Similarity=0.314  Sum_probs=174.4

Q ss_pred             ceEEEEeeccc--CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            3 ELWLLKKSKSV--HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         3 ~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      ..||+|+++..  .....+.+.+|+++++.++||||+++++++ ..+..++||||+.+++|.+++.....   .+++..+
T Consensus        47 ~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~  122 (289)
T 3og7_A           47 GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHASET---KFEMKKL  122 (289)
T ss_dssp             SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEEHHHHHTTC------CCHHHH
T ss_pred             CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCcHHHHHhhccC---CCCHHHH
Confidence            45899998643  345567899999999999999999999965 55678999999999999999975432   5899999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccC-CceeeccceecccccCccccc---c
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAID-RTHLTTQVKVTFGYVDPKYFR---S  156 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~g~~~y~aPE~~~---~  156 (290)
                      +.++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++...... .........||+.|+|||++.   +
T Consensus       123 ~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  199 (289)
T 3og7_A          123 IDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS  199 (289)
T ss_dssp             HHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC----
T ss_pred             HHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCC
Confidence            999999999999999999   999999999999999999999999997643321 112223456899999999986   5


Q ss_pred             CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh-------hhhHHHHHHHHHHHHHhhccCCCCCCCHHHH
Q 044846          157 SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK-------EAEKEEVITFAMVAKRCLNLNGKKQPTMKEV  229 (290)
Q Consensus       157 ~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~cl~~dp~~Rps~~el  229 (290)
                      ..++.++||||||+++|+|++|..||................       ......+..+.+|+.+||+.||.+|||+.++
T Consensus       200 ~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~el  279 (289)
T 3og7_A          200 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRI  279 (289)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHH
Confidence            668889999999999999999999886533222221111111       1112455779999999999999999999999


Q ss_pred             HHHHHhhH
Q 044846          230 TLELAGIR  237 (290)
Q Consensus       230 ~~~l~~~~  237 (290)
                      ++.|+.+.
T Consensus       280 l~~L~~l~  287 (289)
T 3og7_A          280 LAEIEELA  287 (289)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHHHh
Confidence            99998874


No 134
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=1e-41  Score=295.72  Aligned_cols=223  Identities=21%  Similarity=0.219  Sum_probs=182.4

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      |+.||+|+++.......+.+.+|+.+++.++||||+++++++...+..++||||+++|+|.+++....    .+++..+.
T Consensus        34 ~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~  109 (304)
T 2jam_A           34 GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERG----VYTEKDAS  109 (304)
T ss_dssp             CCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS----CCCHHHHH
T ss_pred             CCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHHcC----CCCHHHHH
Confidence            67899999986555556778999999999999999999999999999999999999999999998765    58999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEe---ccCCcEEEeccccccccccCCceeeccceecccccCccccccCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILL---VDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .++.|++.||.|||+++   |+||||||+||++   +.++.+||+|||++.....   .......|++.|+|||++.+..
T Consensus       110 ~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~  183 (304)
T 2jam_A          110 LVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN---GIMSTACGTPGYVAPEVLAQKP  183 (304)
T ss_dssp             HHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC---BTTHHHHSCCCBCCTTTBSSCS
T ss_pred             HHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecCC---CccccccCCCCccChHHhccCC
Confidence            99999999999999999   9999999999999   7788999999999764332   1223456889999999999999


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLE  232 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~  232 (290)
                      ++.++||||||+++|+|++|..|+........ ......      .......+..+.++|.+||+.||++|||+.|++++
T Consensus       184 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (304)
T 2jam_A          184 YSKAVDCWSIGVITYILLCGYPPFYEETESKL-FEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH  262 (304)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            99999999999999999999998865432211 111111      11123346779999999999999999999999987


Q ss_pred             HHh
Q 044846          233 LAG  235 (290)
Q Consensus       233 l~~  235 (290)
                      .+-
T Consensus       263 ~~~  265 (304)
T 2jam_A          263 PWI  265 (304)
T ss_dssp             HHH
T ss_pred             ccc
Confidence            653


No 135
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=6.3e-42  Score=297.75  Aligned_cols=230  Identities=27%  Similarity=0.358  Sum_probs=178.0

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      |+.||+|++..  ....+.+.+|+++++.++||||+++++++.  +..++||||+++|+|.+++..... ...++...++
T Consensus        31 ~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~  105 (307)
T 2eva_A           31 AKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEP-LPYYTAAHAM  105 (307)
T ss_dssp             TEEEEEEECSS--TTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHHHHHHCSSS-EECCCHHHHH
T ss_pred             CeeEEEEEecC--hhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHHHHHhccCC-CCccCHHHHH
Confidence            56799999864  445678999999999999999999999886  458999999999999999986532 1247888999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCc-EEEeccccccccccCCceeeccceecccccCccccccCCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ-AKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFT  160 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~-~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~  160 (290)
                      .++.|++.||.|||+.+..+|+||||||+||+++.++. +||+|||++.....    ......||+.|+|||++.+..++
T Consensus       106 ~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~  181 (307)
T 2eva_A          106 SWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT----HMTNNKGSAAWMAPEVFEGSNYS  181 (307)
T ss_dssp             HHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------------CCTTSSCHHHHTCCCCC
T ss_pred             HHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc----ccccCCCCCceEChhhhCCCCCC
Confidence            99999999999999932222999999999999998886 79999999764321    12334689999999999999999


Q ss_pred             CcccchhhHHHHHHHhcCCCCcccchhhhhhhH-HH---hhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 044846          161 EKSDVYSFSVVLVELNWTKPIHLVDVEENRSLA-AY---FSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGI  236 (290)
Q Consensus       161 ~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~  236 (290)
                      .++||||||+++|+|++|..|+........... ..   .........+..+.+++.+||+.||.+|||+.++++.|+.+
T Consensus       182 ~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  261 (307)
T 2eva_A          182 EKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL  261 (307)
T ss_dssp             THHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            999999999999999999998853322111111 11   11112234456789999999999999999999999999988


Q ss_pred             Hhhh
Q 044846          237 RASI  240 (290)
Q Consensus       237 ~~~~  240 (290)
                      ....
T Consensus       262 ~~~~  265 (307)
T 2eva_A          262 MRYF  265 (307)
T ss_dssp             GGGC
T ss_pred             HHhc
Confidence            6544


No 136
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=1.3e-41  Score=291.82  Aligned_cols=225  Identities=17%  Similarity=0.204  Sum_probs=185.2

Q ss_pred             CceEEEEeecc--cCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKS--VHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~--~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.||+|++..  ......+.+.+|+.+++.++||||+++++++...+..++||||+++|+|.+.+....    .+++..
T Consensus        31 ~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~----~~~~~~  106 (284)
T 3kk8_A           31 GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE----FYSEAD  106 (284)
T ss_dssp             CCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS----SCCHHH
T ss_pred             CceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcC----CCCHHH
Confidence            67899999864  344556788999999999999999999999999999999999999999999998765    589999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCc---EEEeccccccccccCCceeeccceecccccCcccccc
Q 044846           80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ---AKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRS  156 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~---~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~  156 (290)
                      +..++.|++.||.|||+++   |+||||||+||+++.++.   +||+|||++.....  ........|++.|+|||++.+
T Consensus       107 ~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~~~~y~aPE~~~~  181 (284)
T 3kk8_A          107 ASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND--SEAWHGFAGTPGYLSPEVLKK  181 (284)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS--SCBCCCSCSCGGGCCHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc--CccccCCCCCcCCcCchhhcC
Confidence            9999999999999999999   999999999999986655   99999999764432  222334678999999999999


Q ss_pred             CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh-----hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 044846          157 SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS-----KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTL  231 (290)
Q Consensus       157 ~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~  231 (290)
                      ..++.++||||||+++|+|++|..||...............     .......+..+.+|+.+||+.||++|||+.|+++
T Consensus       182 ~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          182 DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            99999999999999999999999988654332211111100     1111234567999999999999999999999998


Q ss_pred             HHHh
Q 044846          232 ELAG  235 (290)
Q Consensus       232 ~l~~  235 (290)
                      +.+-
T Consensus       262 h~~~  265 (284)
T 3kk8_A          262 VPWI  265 (284)
T ss_dssp             SHHH
T ss_pred             Cccc
Confidence            7653


No 137
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=2.8e-42  Score=310.61  Aligned_cols=224  Identities=20%  Similarity=0.235  Sum_probs=174.4

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhc-CCCceeeEEeEEEe----CCcceEEEEeCCCCCHHHHHhhcCCCCCCCC
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQI-NHRNVVKILGCCLE----TEVPLLVYEFIPNGSLYQYIHEQTDDQLPIT   76 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~   76 (290)
                      |+.||||+++.     ...+.+|+.++.++ +||||++++++|..    ...+|||||||.+|+|.+++.....  ..++
T Consensus        87 ~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~--~~l~  159 (400)
T 1nxk_A           87 QEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD--QAFT  159 (400)
T ss_dssp             CCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC-----CCB
T ss_pred             CCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCC--CCCC
Confidence            67899999863     23567899987554 89999999999876    5678999999999999999986532  2589


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEecc---CCcEEEeccccccccccCCceeeccceecccccCccc
Q 044846           77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD---KYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKY  153 (290)
Q Consensus        77 ~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~  153 (290)
                      +..+..++.||+.||.|||+++   |+||||||+|||++.   ++.+||+|||+++....  ........||+.|+|||+
T Consensus       160 ~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~--~~~~~~~~gt~~y~aPE~  234 (400)
T 1nxk_A          160 EREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS--HNSLTTPCYTPYYVAPEV  234 (400)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-------------CTTCCGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEecccccccCC--CCccccCCCCCCccCHhh
Confidence            9999999999999999999999   999999999999997   78899999999875332  122345678999999999


Q ss_pred             cccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhh---hhHHHhh------hhhhHHHHHHHHHHHHHhhccCCCCCC
Q 044846          154 FRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENR---SLAAYFS------KEAEKEEVITFAMVAKRCLNLNGKKQP  224 (290)
Q Consensus       154 ~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~---~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~Rp  224 (290)
                      +.+..++.++|||||||++|+|++|.+||........   .......      .......+.++.+||.+||+.||++||
T Consensus       235 ~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp  314 (400)
T 1nxk_A          235 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM  314 (400)
T ss_dssp             SCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSC
T ss_pred             cCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCc
Confidence            9999999999999999999999999998865432110   0011100      111134567799999999999999999


Q ss_pred             CHHHHHHHHHhhH
Q 044846          225 TMKEVTLELAGIR  237 (290)
Q Consensus       225 s~~el~~~l~~~~  237 (290)
                      |+.|++++.+...
T Consensus       315 t~~eil~hp~~~~  327 (400)
T 1nxk_A          315 TITEFMNHPWIMQ  327 (400)
T ss_dssp             CHHHHHHSHHHHT
T ss_pred             CHHHHhcCccccC
Confidence            9999999976543


No 138
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=1.4e-41  Score=297.25  Aligned_cols=223  Identities=22%  Similarity=0.246  Sum_probs=184.2

Q ss_pred             CceEEEEeecccCch------hHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCC
Q 044846            2 EELWLLKKSKSVHES------NVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPI   75 (290)
Q Consensus         2 ~~~~avK~~~~~~~~------~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~   75 (290)
                      |+.||+|+++.....      ..+.+.+|+.+++.++||||+++++++...+..++||||+++++|.+++....    .+
T Consensus        37 ~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~  112 (321)
T 2a2a_A           37 GLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE----SL  112 (321)
T ss_dssp             CCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCS----CE
T ss_pred             CeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHhcC----CC
Confidence            678999998643321      36789999999999999999999999999999999999999999999998644    58


Q ss_pred             CHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCC----cEEEeccccccccccCCceeeccceecccccCc
Q 044846           76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY----QAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDP  151 (290)
Q Consensus        76 ~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~----~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aP  151 (290)
                      ++..++.++.|++.||.|||+++   |+||||||+||+++.++    .+||+|||++......  .......||+.|+||
T Consensus       113 ~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~gt~~y~aP  187 (321)
T 2a2a_A          113 SEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG--VEFKNIFGTPEFVAP  187 (321)
T ss_dssp             EHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTT--CCCCCCCSCGGGCCH
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCccceecCcc--ccccccCCCCCccCc
Confidence            99999999999999999999999   99999999999999887    7999999998654322  222345689999999


Q ss_pred             cccccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------hhhhHHHHHHHHHHHHHhhccCCCCCCC
Q 044846          152 KYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------KEAEKEEVITFAMVAKRCLNLNGKKQPT  225 (290)
Q Consensus       152 E~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~Rps  225 (290)
                      |++.+..++.++||||||+++|+|++|..||........ ......      .......+..+.+||.+||+.||++|||
T Consensus       188 E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps  266 (321)
T 2a2a_A          188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-LANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLT  266 (321)
T ss_dssp             HHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCC
T ss_pred             ccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcC
Confidence            999999999999999999999999999998865432211 111111      1111234567899999999999999999


Q ss_pred             HHHHHHHHH
Q 044846          226 MKEVTLELA  234 (290)
Q Consensus       226 ~~el~~~l~  234 (290)
                      +.|++++.+
T Consensus       267 ~~e~l~hp~  275 (321)
T 2a2a_A          267 IQEALRHPW  275 (321)
T ss_dssp             HHHHHHSTT
T ss_pred             HHHHhcCcc
Confidence            999998754


No 139
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=9e-42  Score=297.13  Aligned_cols=234  Identities=19%  Similarity=0.310  Sum_probs=178.9

Q ss_pred             ceEEEEeeccc--CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC-----cceEEEEeCCCCCHHHHHhhcC--CCCC
Q 044846            3 ELWLLKKSKSV--HESNVEQFINEVVILSQINHRNVVKILGCCLETE-----VPLLVYEFIPNGSLYQYIHEQT--DDQL   73 (290)
Q Consensus         3 ~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~-----~~~lv~e~~~~g~L~~~l~~~~--~~~~   73 (290)
                      +.||+|+++..  .....+.+.+|+.+++.++||||+++++++...+     ..++||||+++|+|.+++....  ....
T Consensus        63 ~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~  142 (313)
T 3brb_A           63 LKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPK  142 (313)
T ss_dssp             EEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCC
T ss_pred             eEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCc
Confidence            47999998743  3455678999999999999999999999998754     3499999999999999995432  1223


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCc-eeeccceecccccCcc
Q 044846           74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT-HLTTQVKVTFGYVDPK  152 (290)
Q Consensus        74 ~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE  152 (290)
                      .+++..++.++.||+.||.|||+++   |+||||||+||+++.++.+||+|||+++....... .......+++.|+|||
T Consensus       143 ~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  219 (313)
T 3brb_A          143 HIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIE  219 (313)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCch
Confidence            6899999999999999999999999   99999999999999999999999999865432221 1123345678899999


Q ss_pred             ccccCCCCCcccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHh---hhhhhHHHHHHHHHHHHHhhccCCCCCCCHHH
Q 044846          153 YFRSSQFTEKSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYF---SKEAEKEEVITFAMVAKRCLNLNGKKQPTMKE  228 (290)
Q Consensus       153 ~~~~~~~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~e  228 (290)
                      ++.+..++.++||||||+++|+|++ |.+|+...... .......   ....+...+..+.+++.+||+.||.+|||+.+
T Consensus       220 ~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  298 (313)
T 3brb_A          220 SLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH-EMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSV  298 (313)
T ss_dssp             HHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHH
T ss_pred             hhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH-HHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHH
Confidence            9999999999999999999999999 76666433221 1111111   11223345577999999999999999999999


Q ss_pred             HHHHHHhhHhhh
Q 044846          229 VTLELAGIRASI  240 (290)
Q Consensus       229 l~~~l~~~~~~~  240 (290)
                      ++++|+.+...+
T Consensus       299 l~~~L~~l~~~l  310 (313)
T 3brb_A          299 LRLQLEKLLESL  310 (313)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhc
Confidence            999999987654


No 140
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=1e-41  Score=293.88  Aligned_cols=230  Identities=22%  Similarity=0.281  Sum_probs=185.2

Q ss_pred             CceEEEEeecccC--chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKSVH--ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      ++.||+|+++...  ....+.+.+|+++++.++||||+++++++ ..+..++||||+++++|.+++....    .+++..
T Consensus        44 ~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~  118 (291)
T 1xbb_A           44 VKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR----HVKDKN  118 (291)
T ss_dssp             EEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHHHCT----TCCHHH
T ss_pred             eeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCCCHHHHHHhCc----CCCHHH
Confidence            4679999987532  33467899999999999999999999999 5677899999999999999998754    589999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceee--ccceecccccCccccccC
Q 044846           80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLT--TQVKVTFGYVDPKYFRSS  157 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~  157 (290)
                      ++.++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++...........  ....+++.|+|||++.+.
T Consensus       119 ~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  195 (291)
T 1xbb_A          119 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY  195 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccC
Confidence            9999999999999999999   99999999999999999999999999875443322221  223456889999999988


Q ss_pred             CCCCcccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHhh---hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q 044846          158 QFTEKSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYFS---KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLEL  233 (290)
Q Consensus       158 ~~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l  233 (290)
                      .++.++||||||+++|+|++ |..|+........ ......   ...+...+..+.++|.+||+.||.+|||+.++++.|
T Consensus       196 ~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L  274 (291)
T 1xbb_A          196 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL  274 (291)
T ss_dssp             EEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH-HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred             CCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH-HHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            89999999999999999998 8887764332211 111111   112234567899999999999999999999999999


Q ss_pred             HhhHhhh
Q 044846          234 AGIRASI  240 (290)
Q Consensus       234 ~~~~~~~  240 (290)
                      +.+....
T Consensus       275 ~~~~~~~  281 (291)
T 1xbb_A          275 RNYYYDV  281 (291)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9887654


No 141
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=7.8e-42  Score=292.80  Aligned_cols=226  Identities=22%  Similarity=0.250  Sum_probs=183.0

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      ++.||+|++...   .......+.+|+.+++.++||||+++++++...+..++||||+++|+|.+++....    .+++.
T Consensus        34 ~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~----~~~~~  109 (279)
T 3fdn_A           34 KFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQ  109 (279)
T ss_dssp             CCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHS----SCCHH
T ss_pred             CcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCCcHHHHHHhcC----CCCHH
Confidence            567999998542   22335678999999999999999999999999999999999999999999998765    58999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCC
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .+..++.|++.||.|||+++   |+||||||+||+++.++.++|+|||++.....   .......|++.|+|||++.+..
T Consensus       110 ~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~  183 (279)
T 3fdn_A          110 RTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS---SRRTDLCGTLDYLPPEMIEGRM  183 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC-----------CCCCTTCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCc---ccccccCCCCCccCHhHhccCC
Confidence            99999999999999999999   99999999999999999999999998754322   2223456889999999999999


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhhh-HHHhhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhH
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSL-AAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIR  237 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~  237 (290)
                      ++.++||||||+++|+|++|..|+.......... ........+...+..+.+||.+||+.||.+|||+.|++++.+-..
T Consensus       184 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~  263 (279)
T 3fdn_A          184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA  263 (279)
T ss_dssp             CCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHH
T ss_pred             CCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccC
Confidence            9999999999999999999999886443221111 111111222335567899999999999999999999999876443


No 142
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.3e-41  Score=295.74  Aligned_cols=225  Identities=18%  Similarity=0.196  Sum_probs=176.7

Q ss_pred             CceEEEEeecccC--chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKSVH--ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.||+|++....  ....+.+.+|+++++.++||||+++++++...+..++||||+++++|..++....    .+++..
T Consensus        28 ~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----~~~~~~  103 (311)
T 4agu_A           28 GQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQR----GVPEHL  103 (311)
T ss_dssp             CCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTSS----CCCHHH
T ss_pred             CcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCchHHHHHhhhc----CCCHHH
Confidence            6789999986433  3346678899999999999999999999999999999999999999998887554    589999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCcccccc-CC
Q 044846           80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRS-SQ  158 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~  158 (290)
                      +..++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++...... ........|+..|+|||++.+ ..
T Consensus       104 ~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~  179 (311)
T 4agu_A          104 VKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGP-SDYYDDEVATRWYRSPELLVGDTQ  179 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC-------------GGGCCHHHHHTCSC
T ss_pred             HHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCc-ccccCCCcCCccccChHHHhcCCC
Confidence            9999999999999999999   999999999999999999999999998654322 122334568899999999876 56


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHH--Hhhh------------------------------hhhHHHHH
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAA--YFSK------------------------------EAEKEEVI  206 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~--~~~~------------------------------~~~~~~~~  206 (290)
                      ++.++||||||+++|+|++|.+|+............  ....                              ......+.
T Consensus       180 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (311)
T 4agu_A          180 YGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISY  259 (311)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCH
T ss_pred             CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccH
Confidence            899999999999999999999988654332211110  0000                              00012345


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          207 TFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       207 ~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      .+.+|+.+||+.||.+|||++|++++.+
T Consensus       260 ~~~~li~~~L~~dP~~Rpt~~ell~hp~  287 (311)
T 4agu_A          260 PALGLLKGCLHMDPTERLTCEQLLHHPY  287 (311)
T ss_dssp             HHHHHHHHHCCSSTTTSCCHHHHHTSGG
T ss_pred             HHHHHHHHHccCChhhcCCHHHHhcChH
Confidence            6889999999999999999999998744


No 143
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=6.5e-42  Score=293.20  Aligned_cols=231  Identities=18%  Similarity=0.282  Sum_probs=186.2

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      ++.||+|+++... ...+.+.+|+++++.++||||+++++++. .+..++||||+++++|.+++.....  ..+++..+.
T Consensus        37 ~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~  112 (279)
T 1qpc_A           37 HTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSG--IKLTINKLL  112 (279)
T ss_dssp             TEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTTSHHH--HTCCHHHHH
T ss_pred             CcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHHHHHhcCCC--CCCCHHHHH
Confidence            4579999987543 34678999999999999999999999986 4568999999999999999975431  148899999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTE  161 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~  161 (290)
                      .++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++...............++..|+|||++.+..++.
T Consensus       113 ~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  189 (279)
T 1qpc_A          113 DMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI  189 (279)
T ss_dssp             HHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECH
T ss_pred             HHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCc
Confidence            99999999999999999   999999999999999999999999998755433323333455678899999999888999


Q ss_pred             cccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHh---hhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhH
Q 044846          162 KSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYF---SKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIR  237 (290)
Q Consensus       162 ~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~  237 (290)
                      ++||||||+++|+|++ |..|+...... .......   ....+...+..+.+++.+||+.||++|||+.++++.|+.+.
T Consensus       190 ~~Di~slG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  268 (279)
T 1qpc_A          190 KSDVWSFGILLTEIVTHGRIPYPGMTNP-EVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (279)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHhCCCCCCcccCHH-HHHHHHhcccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence            9999999999999998 77776533221 1111111   11122344567999999999999999999999999999887


Q ss_pred             hhh
Q 044846          238 ASI  240 (290)
Q Consensus       238 ~~~  240 (290)
                      ...
T Consensus       269 ~~~  271 (279)
T 1qpc_A          269 TAT  271 (279)
T ss_dssp             HHC
T ss_pred             Hhc
Confidence            654


No 144
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=4.7e-42  Score=294.59  Aligned_cols=224  Identities=17%  Similarity=0.226  Sum_probs=180.0

Q ss_pred             CceEEEEeecc--cCchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKS--VHESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~--~~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|+++.  ........+.+|+..+..+ +||||+++++++...+..++||||+++|+|.+++.........+++.
T Consensus        36 ~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  115 (289)
T 1x8b_A           36 GCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEA  115 (289)
T ss_dssp             CCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHH
T ss_pred             CceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHH
Confidence            67899999874  3344567889999999999 99999999999999999999999999999999998753222258999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccC-------------------CcEEEeccccccccccCCceee
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDK-------------------YQAKISDFRTFKSRAIDRTHLT  139 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~-------------------~~~kl~dfg~~~~~~~~~~~~~  139 (290)
                      .++.++.||+.||.|||+++   |+||||||+||+++.+                   ..+||+|||.+......     
T Consensus       116 ~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----  187 (289)
T 1x8b_A          116 ELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP-----  187 (289)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCS-----
T ss_pred             HHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCc-----
Confidence            99999999999999999999   9999999999999844                   47999999997654322     


Q ss_pred             ccceecccccCccccccC-CCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhhhhhHHHHHHHHHHHHHhhcc
Q 044846          140 TQVKVTFGYVDPKYFRSS-QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNL  218 (290)
Q Consensus       140 ~~~~g~~~y~aPE~~~~~-~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  218 (290)
                      ....|+..|+|||++.+. .++.++|||||||++|+|++|.+++........ +........+...+..+.+++.+||+.
T Consensus       188 ~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~  266 (289)
T 1x8b_A          188 QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHE-IRQGRLPRIPQVLSQEFTELLKVMIHP  266 (289)
T ss_dssp             CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHH-HHTTCCCCCSSCCCHHHHHHHHHHTCS
T ss_pred             cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHH-HHcCCCCCCCcccCHHHHHHHHHHhCC
Confidence            224588999999999876 566799999999999999999887654332211 111111122234567799999999999


Q ss_pred             CCCCCCCHHHHHHHHH
Q 044846          219 NGKKQPTMKEVTLELA  234 (290)
Q Consensus       219 dp~~Rps~~el~~~l~  234 (290)
                      ||++|||+.|++++.+
T Consensus       267 dp~~Rps~~~ll~h~~  282 (289)
T 1x8b_A          267 DPERRPSAMALVKHSV  282 (289)
T ss_dssp             SGGGSCCHHHHHTCTT
T ss_pred             CcccCCCHHHHhhChH
Confidence            9999999999997754


No 145
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=5.3e-42  Score=314.55  Aligned_cols=223  Identities=17%  Similarity=0.196  Sum_probs=184.3

Q ss_pred             CceEEEEeecccC---chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSVH---ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||||+++...   ....+.+.+|+.+++.++||||+++++++...+..++||||+++|+|.+++....    .+++.
T Consensus        41 g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~----~l~~~  116 (476)
T 2y94_A           41 GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG----RLDEK  116 (476)
T ss_dssp             CCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSS----SCCHH
T ss_pred             CCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcC----CCCHH
Confidence            6789999986432   2346688999999999999999999999999999999999999999999997644    58999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCC
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .++.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++.....  ........||+.|+|||++.+..
T Consensus       117 ~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~--~~~~~~~~gt~~y~aPE~~~~~~  191 (476)
T 2y94_A          117 ESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD--GEFLRTSCGSPNYAAPEVISGRL  191 (476)
T ss_dssp             HHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCT--TCCBCCCCSCSTTCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhccc--cccccccCCCcCeEChhhccCCC
Confidence            99999999999999999999   99999999999999999999999999865432  22234567899999999998877


Q ss_pred             C-CCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh--hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          159 F-TEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK--EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       159 ~-~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      + +.++|||||||++|+|++|..||....... ........  ..+...+..+.+||.+||+.||.+|||+.|++++.+
T Consensus       192 ~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~-~~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~  269 (476)
T 2y94_A          192 YAGPEVDIWSSGVILYALLCGTLPFDDDHVPT-LFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEW  269 (476)
T ss_dssp             BCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH-HHHHHHTTCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHH
T ss_pred             CCCCcceehhhHHHHHHHhhCCCCCCCCCHHH-HHHHHhcCCcCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHH
Confidence            5 679999999999999999999886443221 11111111  112234567899999999999999999999998754


No 146
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=1.3e-41  Score=297.25  Aligned_cols=233  Identities=19%  Similarity=0.294  Sum_probs=186.5

Q ss_pred             CceEEEEeeccc-CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCC------CCCC
Q 044846            2 EELWLLKKSKSV-HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD------DQLP   74 (290)
Q Consensus         2 ~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------~~~~   74 (290)
                      ++.||+|++... .......+.+|+++++.++||||+++++++...+..++||||+++|+|.+++.....      ....
T Consensus        55 ~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  134 (322)
T 1p4o_A           55 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP  134 (322)
T ss_dssp             EEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCC
T ss_pred             ceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCC
Confidence            356999998743 344566799999999999999999999999999999999999999999999976421      1124


Q ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCce-eeccceecccccCccc
Q 044846           75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH-LTTQVKVTFGYVDPKY  153 (290)
Q Consensus        75 ~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~  153 (290)
                      +++..++.++.||+.||.|||+++   |+||||||+||+++.++.+||+|||+++........ ......+++.|+|||+
T Consensus       135 ~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  211 (322)
T 1p4o_A          135 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES  211 (322)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhh
Confidence            688999999999999999999999   999999999999999999999999998654322211 2233456888999999


Q ss_pred             cccCCCCCcccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHhh---hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHH
Q 044846          154 FRSSQFTEKSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYFS---KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV  229 (290)
Q Consensus       154 ~~~~~~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el  229 (290)
                      +.+..++.++||||||+++|+|++ |..|+...... ........   ...+...+..+.++|.+||+.||.+|||+.|+
T Consensus       212 ~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~  290 (322)
T 1p4o_A          212 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEI  290 (322)
T ss_dssp             HHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             hccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence            999999999999999999999998 66666433221 11111111   11223456679999999999999999999999


Q ss_pred             HHHHHhhHh
Q 044846          230 TLELAGIRA  238 (290)
Q Consensus       230 ~~~l~~~~~  238 (290)
                      +++|+....
T Consensus       291 l~~L~~~~~  299 (322)
T 1p4o_A          291 ISSIKEEME  299 (322)
T ss_dssp             HHHHGGGSC
T ss_pred             HHHHHHhhc
Confidence            999987643


No 147
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=4.2e-42  Score=301.51  Aligned_cols=236  Identities=20%  Similarity=0.295  Sum_probs=170.9

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcC-CCceeeEEeEEEe--------CCcceEEEEeCCCCCHHHHHhhcCCCC
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQIN-HRNVVKILGCCLE--------TEVPLLVYEFIPNGSLYQYIHEQTDDQ   72 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~-Hpniv~~~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~~~~   72 (290)
                      |+.||+|++........+.+.+|+.+++++. ||||+++++++..        ....++||||+ +|+|.+++...... 
T Consensus        53 ~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~-~g~L~~~l~~~~~~-  130 (337)
T 3ll6_A           53 GREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELC-KGQLVEFLKKMESR-  130 (337)
T ss_dssp             CCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECC-SEEHHHHHHHHHTT-
T ss_pred             CcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEec-CCCHHHHHHHhhcc-
Confidence            6789999997777777888999999999995 9999999999953        33579999999 57999999763322 


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCce-----------eecc
Q 044846           73 LPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH-----------LTTQ  141 (290)
Q Consensus        73 ~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-----------~~~~  141 (290)
                      ..+++..++.++.||+.||.|||+.+. +|+||||||+|||++.++.+||+|||+++........           ....
T Consensus       131 ~~~~~~~~~~i~~qi~~~l~~LH~~~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (337)
T 3ll6_A          131 GPLSCDTVLKIFYQTCRAVQHMHRQKP-PIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEIT  209 (337)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHTSSS-CCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC-----------------
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCC-CEEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhcc
Confidence            258999999999999999999999763 3999999999999999999999999998754322111           1113


Q ss_pred             ceecccccCcccc---ccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhhhhhHHHHHHHHHHHHHhhcc
Q 044846          142 VKVTFGYVDPKYF---RSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNL  218 (290)
Q Consensus       142 ~~g~~~y~aPE~~---~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  218 (290)
                      ..||+.|+|||++   .+..++.++|||||||++|+|++|..||....... ..............+..+.+||.+||+.
T Consensus       210 ~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~  288 (337)
T 3ll6_A          210 RNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR-IVNGKYSIPPHDTQYTVFHSLIRAMLQV  288 (337)
T ss_dssp             --------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------------CCCCTTCCSSGGGHHHHHHHSCS
T ss_pred             ccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-hhcCcccCCcccccchHHHHHHHHHccC
Confidence            4588999999998   56678889999999999999999999885432221 1111111112222334588999999999


Q ss_pred             CCCCCCCHHHHHHHHHhhHhhhC
Q 044846          219 NGKKQPTMKEVTLELAGIRASIG  241 (290)
Q Consensus       219 dp~~Rps~~el~~~l~~~~~~~~  241 (290)
                      ||.+|||+.|++++|+.+.....
T Consensus       289 ~p~~Rps~~e~l~~l~~~~~~~~  311 (337)
T 3ll6_A          289 NPEERLSIAEVVHQLQEIAAARN  311 (337)
T ss_dssp             SGGGSCCHHHHHHHHHHHHHHTT
T ss_pred             ChhhCcCHHHHHHHHHHHHhccC
Confidence            99999999999999999987543


No 148
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=6.1e-42  Score=302.30  Aligned_cols=226  Identities=19%  Similarity=0.267  Sum_probs=177.5

Q ss_pred             CceEEEEeeccc--CchhHHHHHHHHHHHHhcCC--CceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCH
Q 044846            2 EELWLLKKSKSV--HESNVEQFINEVVILSQINH--RNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW   77 (290)
Q Consensus         2 ~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~H--pniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~   77 (290)
                      |+.||+|++...  .....+.+.+|+.+|+.++|  |||+++++++...+..++|||+ .+|+|.+++....    .+++
T Consensus        33 ~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~-~~~~L~~~l~~~~----~~~~  107 (343)
T 3dbq_A           33 KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKK----SIDP  107 (343)
T ss_dssp             SCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC-CSEEHHHHHHHSC----CCCH
T ss_pred             CCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeC-CCCCHHHHHHhcC----CCCH
Confidence            578999998643  34456789999999999976  9999999999999999999995 5889999998754    5899


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCce-eeccceecccccCcccccc
Q 044846           78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH-LTTQVKVTFGYVDPKYFRS  156 (290)
Q Consensus        78 ~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~  156 (290)
                      ..+..++.||+.||.|||+++   |+||||||+|||++ ++.+||+|||+++........ ......||+.|+|||++.+
T Consensus       108 ~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  183 (343)
T 3dbq_A          108 WERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD  183 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC------------CCCCSSCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhh
Confidence            999999999999999999999   99999999999997 688999999998754332221 2335678999999999865


Q ss_pred             -----------CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh----hhhHHHHHHHHHHHHHhhccCCC
Q 044846          157 -----------SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK----EAEKEEVITFAMVAKRCLNLNGK  221 (290)
Q Consensus       157 -----------~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~dp~  221 (290)
                                 ..++.++|||||||++|+|++|..||................    ..+...+..+.+|+.+||+.||.
T Consensus       184 ~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~  263 (343)
T 3dbq_A          184 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPK  263 (343)
T ss_dssp             CC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTT
T ss_pred             ccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChh
Confidence                       668889999999999999999999886433322222222111    11222345788999999999999


Q ss_pred             CCCCHHHHHHHHHhh
Q 044846          222 KQPTMKEVTLELAGI  236 (290)
Q Consensus       222 ~Rps~~el~~~l~~~  236 (290)
                      +|||+.|++++.+.-
T Consensus       264 ~Rpt~~e~l~hp~~~  278 (343)
T 3dbq_A          264 QRISIPELLAHPYVQ  278 (343)
T ss_dssp             TSCCHHHHHTSHHHH
T ss_pred             HCCCHHHHHhCcccc
Confidence            999999999887643


No 149
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=8.1e-42  Score=317.12  Aligned_cols=229  Identities=17%  Similarity=0.141  Sum_probs=187.0

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|+++..   .....+.+.+|+.+++.++||||++++++|......|+||||++||+|..++.........+++.
T Consensus       210 g~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~  289 (543)
T 3c4z_A          210 GKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP  289 (543)
T ss_dssp             CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHH
T ss_pred             CcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHH
Confidence            688999998642   23446788999999999999999999999999999999999999999999998765434469999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCC
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .++.++.||+.||.|||+++   |+||||||+|||++.+|.+||+|||+++...... .......||+.|+|||++.+..
T Consensus       290 ~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~  365 (543)
T 3c4z_A          290 RAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-TKTKGYAGTPGFMAPELLLGEE  365 (543)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTTC-CCBCCCCSCTTTSCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeeccCCC-cccccccCCccccChhhhcCCC
Confidence            99999999999999999999   9999999999999999999999999987543222 2233457899999999999999


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhh---hhhhHHHhh--hhhhHHHHHHHHHHHHHhhccCCCCCCCH-----HH
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEE---NRSLAAYFS--KEAEKEEVITFAMVAKRCLNLNGKKQPTM-----KE  228 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rps~-----~e  228 (290)
                      ++.++|||||||++|||++|.+||......   .........  ...+...+..+.+||.+||+.||.+||++     ++
T Consensus       366 ~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~e  445 (543)
T 3c4z_A          366 YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDG  445 (543)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHH
T ss_pred             CChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHH
Confidence            999999999999999999999998654211   111111111  11233456789999999999999999964     67


Q ss_pred             HHHHHH
Q 044846          229 VTLELA  234 (290)
Q Consensus       229 l~~~l~  234 (290)
                      ++.|..
T Consensus       446 i~~Hpf  451 (543)
T 3c4z_A          446 LRTHPL  451 (543)
T ss_dssp             HHTSGG
T ss_pred             HHcCcc
Confidence            776643


No 150
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.7e-41  Score=300.92  Aligned_cols=220  Identities=18%  Similarity=0.215  Sum_probs=178.9

Q ss_pred             CceEEEEeecc--cCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC------cceEEEEeCCCCCHHHHHhhcCCCCC
Q 044846            2 EELWLLKKSKS--VHESNVEQFINEVVILSQINHRNVVKILGCCLETE------VPLLVYEFIPNGSLYQYIHEQTDDQL   73 (290)
Q Consensus         2 ~~~~avK~~~~--~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~------~~~lv~e~~~~g~L~~~l~~~~~~~~   73 (290)
                      |+.||+|++..  ......+++.+|+++++.++||||+++++++...+      .+|+||||+ +++|.+++...     
T Consensus        50 ~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-----  123 (367)
T 1cm8_A           50 GAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHE-----  123 (367)
T ss_dssp             CCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHHC-----
T ss_pred             CCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHHhcC-----
Confidence            67899999854  23445678999999999999999999999998753      459999999 88999999863     


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccc
Q 044846           74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKY  153 (290)
Q Consensus        74 ~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~  153 (290)
                      .+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++.....    .....+|+.|+|||+
T Consensus       124 ~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~  196 (367)
T 1cm8_A          124 KLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSE----MTGYVVTRWYRAPEV  196 (367)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCSS----CCSSCSCGGGCCTHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeecccccccc----cCcCcCCCCcCCHHH
Confidence            4889999999999999999999999   999999999999999999999999998754321    234578999999999


Q ss_pred             ccc-CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhh--hHHHhhh------------------------------hh
Q 044846          154 FRS-SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRS--LAAYFSK------------------------------EA  200 (290)
Q Consensus       154 ~~~-~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~--~~~~~~~------------------------------~~  200 (290)
                      +.+ ..++.++||||+||++|+|++|.+||.........  .......                              ..
T Consensus       197 ~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (367)
T 1cm8_A          197 ILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASI  276 (367)
T ss_dssp             HHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGT
T ss_pred             HhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHH
Confidence            887 67999999999999999999999988654322111  0000000                              00


Q ss_pred             hHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          201 EKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       201 ~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      ....+..+.+|+.+||+.||.+|||+.|+++|..
T Consensus       277 ~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~  310 (367)
T 1cm8_A          277 LTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPY  310 (367)
T ss_dssp             CTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred             CCCCCHHHHHHHHHHccCChhHCCCHHHHhcChH
Confidence            0122567899999999999999999999998854


No 151
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=2.5e-42  Score=321.82  Aligned_cols=229  Identities=20%  Similarity=0.288  Sum_probs=184.6

Q ss_pred             ceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHHH
Q 044846            3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLR   82 (290)
Q Consensus         3 ~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~   82 (290)
                      ..||||+++... ...+.|.+|+++|+.|+||||+++++++.. +..+||||||.+|+|.+++......  .+++..++.
T Consensus       292 ~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~--~l~~~~~~~  367 (535)
T 2h8h_A          292 TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGK--YLRLPQLVD  367 (535)
T ss_dssp             EEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSHHHHT--TCCHHHHHH
T ss_pred             ceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhhcCCC--CCCHHHHHH
Confidence            469999998643 346789999999999999999999999876 6789999999999999999764321  488999999


Q ss_pred             HHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCCCCc
Q 044846           83 ITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEK  162 (290)
Q Consensus        83 ~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~  162 (290)
                      ++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++..............++..|+|||++.+..++.+
T Consensus       368 i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  444 (535)
T 2h8h_A          368 MAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK  444 (535)
T ss_dssp             HHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHH
T ss_pred             HHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCch
Confidence            9999999999999999   9999999999999999999999999986543221111223456778999999999999999


Q ss_pred             ccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHh---hhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhHh
Q 044846          163 SDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYF---SKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRA  238 (290)
Q Consensus       163 ~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~  238 (290)
                      +|||||||++|||++ |..|+...... .......   ....+..++..+.+||.+||+.||++|||+.+|++.|+.+..
T Consensus       445 sDvwSlGv~l~el~t~g~~P~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~  523 (535)
T 2h8h_A          445 SDVWSFGILLTELTTKGRVPYPGMVNR-EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  523 (535)
T ss_dssp             HHHHHHHHHHHHHTTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence            999999999999998 77776533221 1111111   112233456779999999999999999999999999988754


Q ss_pred             h
Q 044846          239 S  239 (290)
Q Consensus       239 ~  239 (290)
                      .
T Consensus       524 ~  524 (535)
T 2h8h_A          524 S  524 (535)
T ss_dssp             C
T ss_pred             c
Confidence            3


No 152
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=9.6e-42  Score=306.18  Aligned_cols=225  Identities=19%  Similarity=0.269  Sum_probs=178.4

Q ss_pred             CceEEEEeecc--cCchhHHHHHHHHHHHHhcC--CCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCH
Q 044846            2 EELWLLKKSKS--VHESNVEQFINEVVILSQIN--HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW   77 (290)
Q Consensus         2 ~~~~avK~~~~--~~~~~~~~~~~E~~~l~~l~--Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~   77 (290)
                      |+.||||++..  .+....+.+.+|+++|+.|+  ||||+++++++...+..++||| +.+++|.+++....    .+++
T Consensus        80 ~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~~~----~~~~  154 (390)
T 2zmd_A           80 KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKK----SIDP  154 (390)
T ss_dssp             CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCSEEHHHHHHHCS----SCCH
T ss_pred             CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCCCCHHHHHHhcC----CCCH
Confidence            57899999864  34456778999999999996  5999999999999999999999 55889999998754    5888


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCce-eeccceecccccCcccccc
Q 044846           78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH-LTTQVKVTFGYVDPKYFRS  156 (290)
Q Consensus        78 ~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~  156 (290)
                      ..+..++.||+.||.|||+++   |+||||||+|||++ ++.+||+|||+++........ ......||+.|+|||++.+
T Consensus       155 ~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  230 (390)
T 2zmd_A          155 WERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKD  230 (390)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhh
Confidence            899999999999999999999   99999999999995 689999999998754332221 2345678999999999875


Q ss_pred             -----------CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh----hhhHHHHHHHHHHHHHhhccCCC
Q 044846          157 -----------SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK----EAEKEEVITFAMVAKRCLNLNGK  221 (290)
Q Consensus       157 -----------~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~dp~  221 (290)
                                 ..++.++|||||||++|+|++|.+||.........+......    ..+...+..+.+||.+||+.||.
T Consensus       231 ~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  310 (390)
T 2zmd_A          231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPK  310 (390)
T ss_dssp             C------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTT
T ss_pred             ccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChh
Confidence                       368889999999999999999999986543322222222211    11122245789999999999999


Q ss_pred             CCCCHHHHHHHHHh
Q 044846          222 KQPTMKEVTLELAG  235 (290)
Q Consensus       222 ~Rps~~el~~~l~~  235 (290)
                      +|||+.|++++.+.
T Consensus       311 ~Rps~~ell~hp~~  324 (390)
T 2zmd_A          311 QRISIPELLAHPYV  324 (390)
T ss_dssp             TSCCHHHHHTSHHH
T ss_pred             hCCCHHHHhhCcCc
Confidence            99999999988654


No 153
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=1.1e-41  Score=292.95  Aligned_cols=226  Identities=21%  Similarity=0.219  Sum_probs=177.3

Q ss_pred             CceEEEEeeccc-CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            2 EELWLLKKSKSV-HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         2 ~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      |+.||+|++... .....+.+.+|+++++.++||||+++++++......++||||+++|+|.+++.........+++..+
T Consensus        47 ~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  126 (285)
T 3is5_A           47 GLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYV  126 (285)
T ss_dssp             CCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHH
T ss_pred             CceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHH
Confidence            568999998643 3445778999999999999999999999999999999999999999999999664322236899999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEe---ccCCcEEEeccccccccccCCceeeccceecccccCccccccC
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILL---VDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSS  157 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  157 (290)
                      +.++.|++.||.|||+++   |+||||||+||++   +.++.+||+|||++......  .......|++.|+|||++. .
T Consensus       127 ~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~t~~y~aPE~~~-~  200 (285)
T 3is5_A          127 AELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD--EHSTNAAGTALYMAPEVFK-R  200 (285)
T ss_dssp             HHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC------------CTTGGGCCHHHHT-T
T ss_pred             HHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCc--ccCcCcccccCcCChHHhc-c
Confidence            999999999999999999   9999999999999   45678999999998643322  2234466899999999985 5


Q ss_pred             CCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh-h---hhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q 044846          158 QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK-E---AEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLEL  233 (290)
Q Consensus       158 ~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l  233 (290)
                      .++.++||||||+++|+|++|..||................ .   .....+..+.+|+.+||+.||++|||+.|++++.
T Consensus       201 ~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp  280 (285)
T 3is5_A          201 DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHE  280 (285)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSG
T ss_pred             CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence            68899999999999999999999886543222211111110 0   1112356788999999999999999999998764


No 154
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=2.5e-41  Score=293.80  Aligned_cols=226  Identities=21%  Similarity=0.276  Sum_probs=178.7

Q ss_pred             CceEEEEeecccC-----chhHHHHHHHHHHHHhc---CCCceeeEEeEEEeCC-----cceEEEEeCCCCCHHHHHhhc
Q 044846            2 EELWLLKKSKSVH-----ESNVEQFINEVVILSQI---NHRNVVKILGCCLETE-----VPLLVYEFIPNGSLYQYIHEQ   68 (290)
Q Consensus         2 ~~~~avK~~~~~~-----~~~~~~~~~E~~~l~~l---~Hpniv~~~~~~~~~~-----~~~lv~e~~~~g~L~~~l~~~   68 (290)
                      |+.||+|+++...     ......+.+|+++++.+   +||||+++++++....     ..++||||+. |+|.+++...
T Consensus        34 ~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~  112 (308)
T 3g33_A           34 GHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKA  112 (308)
T ss_dssp             CCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTC
T ss_pred             CcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhc
Confidence            6789999986422     12234567788887776   4999999999998765     5799999995 6999999876


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccc
Q 044846           69 TDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGY  148 (290)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y  148 (290)
                      ...  .+++..++.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++....  ........||+.|
T Consensus       113 ~~~--~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~gt~~y  185 (308)
T 3g33_A          113 PPP--GLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY--QMALTPVVVTLWY  185 (308)
T ss_dssp             CTT--CSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEECSCSCTTTSTT--CCCSGGGGCCCSS
T ss_pred             cCC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEEeeCccccccCC--CcccCCccccccc
Confidence            532  4899999999999999999999999   99999999999999999999999999864332  2223456789999


Q ss_pred             cCccccccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHH--hh--------------------------hhh
Q 044846          149 VDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAY--FS--------------------------KEA  200 (290)
Q Consensus       149 ~aPE~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~--~~--------------------------~~~  200 (290)
                      +|||++.+..++.++|||||||++|+|++|.+||.............  ..                          ...
T Consensus       186 ~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (308)
T 3g33_A          186 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSV  265 (308)
T ss_dssp             CCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHH
T ss_pred             cCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHh
Confidence            99999999999999999999999999999999886543322111110  00                          000


Q ss_pred             hHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 044846          201 EKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAG  235 (290)
Q Consensus       201 ~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~  235 (290)
                      ....+..+.+||.+||+.||++|||+.|+++|.+-
T Consensus       266 ~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~  300 (308)
T 3g33_A          266 VPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL  300 (308)
T ss_dssp             SCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC
T ss_pred             CccccHHHHHHHHHHhcCCCccCCCHHHHhcCccc
Confidence            11234678999999999999999999999987543


No 155
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=4.4e-42  Score=301.56  Aligned_cols=224  Identities=19%  Similarity=0.256  Sum_probs=171.4

Q ss_pred             CceEEEEeecccC--chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKSVH--ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.||+|+++...  ....+.+.+|+++++.++||||+++++++...+..++||||+. |+|.+++....    .+++..
T Consensus        59 ~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~----~~~~~~  133 (329)
T 3gbz_A           59 NETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYMDKNP----DVSMRV  133 (329)
T ss_dssp             TEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHCT----TCCHHH
T ss_pred             CceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-CCHHHHHhhcC----CCCHHH
Confidence            6789999997533  2335678899999999999999999999999999999999996 59999998765    589999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEec-----cCCcEEEeccccccccccCCceeeccceecccccCcccc
Q 044846           80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLV-----DKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYF  154 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~-----~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~  154 (290)
                      ++.++.||+.||.|||+++   |+||||||+|||++     ..+.+||+|||+++..... ........||..|+|||++
T Consensus       134 ~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~~t~~y~aPE~~  209 (329)
T 3gbz_A          134 IKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP-IRQFTHEIITLWYRPPEIL  209 (329)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC------------CCTTCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCCccccCCc-ccccCCCcCCccccCHHHh
Confidence            9999999999999999999   99999999999994     4556999999998654322 1223345678999999999


Q ss_pred             ccC-CCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh-------------------------------hhhhH
Q 044846          155 RSS-QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS-------------------------------KEAEK  202 (290)
Q Consensus       155 ~~~-~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~  202 (290)
                      .+. .++.++|||||||++|+|++|.+||...............                               .....
T Consensus       210 ~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (329)
T 3gbz_A          210 LGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGA  289 (329)
T ss_dssp             TTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGG
T ss_pred             cCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhccc
Confidence            875 4899999999999999999999988654332221111000                               00011


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          203 EEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       203 ~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      ..+..+.+||.+||+.||.+|||+.|+++|.+
T Consensus       290 ~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  321 (329)
T 3gbz_A          290 LLDDEGLDLLTAMLEMDPVKRISAKNALEHPY  321 (329)
T ss_dssp             GSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred             ccCHHHHHHHHHHccCChhhCCCHHHHhCCcc
Confidence            13467899999999999999999999997754


No 156
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=3.1e-41  Score=311.11  Aligned_cols=224  Identities=21%  Similarity=0.226  Sum_probs=183.4

Q ss_pred             CceEEEEeecc--cCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKS--VHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~--~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.||+|++..  ........+.+|+++++.++||||+++++++...+..++|||||.+|+|.+.+....    .+++..
T Consensus        47 ~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~  122 (486)
T 3mwu_A           47 QQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK----RFSEHD  122 (486)
T ss_dssp             CCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS----SCCHHH
T ss_pred             CCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcC----CCCHHH
Confidence            67899999853  223456789999999999999999999999999999999999999999999998765    589999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEec---cCCcEEEeccccccccccCCceeeccceecccccCcccccc
Q 044846           80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLV---DKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRS  156 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~  156 (290)
                      +..++.||+.||.|||+++   |+||||||+|||++   .++.+||+|||+++.....  .......||+.|+|||++.+
T Consensus       123 ~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~  197 (486)
T 3mwu_A          123 AARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRIGTAYYIAPEVLRG  197 (486)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC------CCTTGGGGCCGGGGGS
T ss_pred             HHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC--CccCCCcCCCCCCCHHHhCC
Confidence            9999999999999999999   99999999999995   4567999999998644322  22344568999999999876


Q ss_pred             CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHH
Q 044846          157 SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVT  230 (290)
Q Consensus       157 ~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~  230 (290)
                       .++.++||||+||++|+|++|.+||........ +.....      .+.....+..+.+||.+||+.||.+|||+.|++
T Consensus       198 -~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l  275 (486)
T 3mwu_A          198 -TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-LKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCL  275 (486)
T ss_dssp             -CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             -CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence             589999999999999999999999865433221 111111      122234567899999999999999999999999


Q ss_pred             HHHHhh
Q 044846          231 LELAGI  236 (290)
Q Consensus       231 ~~l~~~  236 (290)
                      ++.+-.
T Consensus       276 ~hp~~~  281 (486)
T 3mwu_A          276 EHPWIQ  281 (486)
T ss_dssp             HCHHHH
T ss_pred             cCHhhc
Confidence            986543


No 157
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=1.4e-41  Score=301.76  Aligned_cols=226  Identities=20%  Similarity=0.245  Sum_probs=183.8

Q ss_pred             CceEEEEeeccc-CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            2 EELWLLKKSKSV-HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         2 ~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      |+.||+|+++.. .....+.+.+|+.+++.++||||+++++++...+..++||||+++|+|.+++....    .+++..+
T Consensus        58 ~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~  133 (360)
T 3eqc_A           58 GLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG----RIPEQIL  133 (360)
T ss_dssp             CCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHS----SCCHHHH
T ss_pred             CcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHcC----CCCHHHH
Confidence            678999998754 44556789999999999999999999999999999999999999999999998765    5889999


Q ss_pred             HHHHHHHHHHHHHHhhC-CCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCC
Q 044846           81 LRITVEVSRVLSYLHSV-ASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQF  159 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~-~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~  159 (290)
                      ..++.|++.||.|||+. +   |+||||||+||+++.++.+||+|||++.....   .......||+.|+|||++.+..+
T Consensus       134 ~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~  207 (360)
T 3eqc_A          134 GKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSFVGTRSYMSPERLQGTHY  207 (360)
T ss_dssp             HHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHH---HC----CCCCTTCCHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCccccc---ccccCCCCCCCeECHHHHcCCCC
Confidence            99999999999999986 8   99999999999999999999999998754321   12234578999999999999999


Q ss_pred             CCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHH-----------------------------------------hh-
Q 044846          160 TEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAY-----------------------------------------FS-  197 (290)
Q Consensus       160 ~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~-----------------------------------------~~-  197 (290)
                      +.++|||||||++|+|++|..||.............                                         .. 
T Consensus       208 ~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (360)
T 3eqc_A          208 SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNE  287 (360)
T ss_dssp             SHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHS
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhcc
Confidence            999999999999999999998886433221110000                                         00 


Q ss_pred             ---hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhH
Q 044846          198 ---KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIR  237 (290)
Q Consensus       198 ---~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~  237 (290)
                         .......+..+.+||.+||+.||++|||+.|+++|.+--.
T Consensus       288 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  330 (360)
T 3eqc_A          288 PPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR  330 (360)
T ss_dssp             CCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHH
T ss_pred             CCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhc
Confidence               0000113557899999999999999999999999876544


No 158
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=9e-42  Score=302.19  Aligned_cols=229  Identities=12%  Similarity=0.138  Sum_probs=183.0

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceee---------------EEeEEEe-CCcceEEEEeCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVK---------------ILGCCLE-TEVPLLVYEFIPNGSLYQYI   65 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~---------------~~~~~~~-~~~~~lv~e~~~~g~L~~~l   65 (290)
                      |+.||+|++...     +.+.+|+++++.++||||++               +++++.. ....++||||+ +++|.+++
T Consensus        75 ~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l  148 (352)
T 2jii_A           75 KQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSAL  148 (352)
T ss_dssp             --CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHH
T ss_pred             CceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHH
Confidence            578999998753     35789999999999999988               5677766 67889999999 99999999


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCC--cEEEeccccccccccCCce------
Q 044846           66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY--QAKISDFRTFKSRAIDRTH------  137 (290)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~--~~kl~dfg~~~~~~~~~~~------  137 (290)
                      .....  ..+++..++.++.||+.||.|||+++   |+||||||+|||++.++  .+||+|||+++........      
T Consensus       149 ~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  223 (352)
T 2jii_A          149 DVSPK--HVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEG  223 (352)
T ss_dssp             HHSGG--GCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTT
T ss_pred             HhCCc--CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCcccccccc
Confidence            87521  15899999999999999999999999   99999999999999998  8999999998654322111      


Q ss_pred             eeccceecccccCccccccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh---hh-h--h------HHHH
Q 044846          138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS---KE-A--E------KEEV  205 (290)
Q Consensus       138 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~---~~-~--~------~~~~  205 (290)
                      ......||+.|+|||++.+..++.++|||||||++|+|++|..||...............   .. .  .      ...+
T Consensus       224 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (352)
T 2jii_A          224 SRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPS  303 (352)
T ss_dssp             SSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCC
T ss_pred             ccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCc
Confidence            113357899999999999999999999999999999999999888654312111111111   00 0  0      1235


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHHHHHhhHhhhC
Q 044846          206 ITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASIG  241 (290)
Q Consensus       206 ~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~~~~  241 (290)
                      ..+.+|+.+||+.||++|||+.++++.|+.+....+
T Consensus       304 ~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~  339 (352)
T 2jii_A          304 ETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR  339 (352)
T ss_dssp             HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence            779999999999999999999999999999877653


No 159
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=1.2e-41  Score=290.97  Aligned_cols=222  Identities=18%  Similarity=0.191  Sum_probs=171.5

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|++...   .....+.+.+|+++++.++||||+++++++...+..++||||+ +++|.+++....    .+++.
T Consensus        38 ~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~----~~~~~  112 (275)
T 2eue_A           38 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRD----KMSEQ  112 (275)
T ss_dssp             CCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-CEEHHHHHHTSS----SCCHH
T ss_pred             CCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-CCcHHHHHHhcC----CCCHH
Confidence            678999998643   2344668899999999999999999999999999999999999 779999887654    58999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCC
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .++.++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++.....  ........||+.|+|||++.+..
T Consensus       113 ~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~  187 (275)
T 2eue_A          113 EARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSCGSPNYAAPEVISGKL  187 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC-----------------CTTCCHHHHCC--
T ss_pred             HHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccC--cccccCCCCCcCcCCceeeeCCC
Confidence            99999999999999999999   99999999999999999999999999764332  22233456899999999998876


Q ss_pred             C-CCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHh--hhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          159 F-TEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYF--SKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       159 ~-~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      + +.++||||||+++|+|++|..||........ .....  ....+...+..+.+||.+||+.||.+|||+.|++++.+
T Consensus       188 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h~~  265 (275)
T 2eue_A          188 YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL-FKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW  265 (275)
T ss_dssp             ---THHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCHH
T ss_pred             CCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhCCe
Confidence            5 6899999999999999999998864432211 11111  11122335667899999999999999999999998754


No 160
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=2.5e-42  Score=302.49  Aligned_cols=228  Identities=19%  Similarity=0.297  Sum_probs=180.0

Q ss_pred             EEEEeeccc-CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHHHH
Q 044846            5 WLLKKSKSV-HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRI   83 (290)
Q Consensus         5 ~avK~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~   83 (290)
                      ||+|++... .....+.+.+|+.+++.++||||+++++++. .+..++||||+.+|+|.+++.....   .+++..++.+
T Consensus        45 v~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~  120 (325)
T 3kex_A           45 VCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRG---ALGPQLLLNW  120 (325)
T ss_dssp             EEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECCTTCBSHHHHHSSGG---GSCTTHHHHH
T ss_pred             EEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeCCCCCHHHHHHHccc---cCCHHHHHHH
Confidence            777877532 2344556789999999999999999999986 4568999999999999999986432   5888899999


Q ss_pred             HHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCce-eeccceecccccCccccccCCCCCc
Q 044846           84 TVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH-LTTQVKVTFGYVDPKYFRSSQFTEK  162 (290)
Q Consensus        84 ~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~  162 (290)
                      +.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++........ ......++..|+|||++.+..++.+
T Consensus       121 ~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  197 (325)
T 3kex_A          121 GVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQ  197 (325)
T ss_dssp             HHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHH
T ss_pred             HHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChh
Confidence            999999999999999   999999999999999999999999998765433222 2344567889999999999999999


Q ss_pred             ccchhhHHHHHHHhc-CCCCcccchhhhh--hhHHHhhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhHhh
Q 044846          163 SDVYSFSVVLVELNW-TKPIHLVDVEENR--SLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRAS  239 (290)
Q Consensus       163 ~DiwS~G~il~~l~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~~  239 (290)
                      +|||||||++|+|++ |..||........  .+........+...+..+.+++.+||+.||.+|||+.+++++|+.+...
T Consensus       198 ~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~  277 (325)
T 3kex_A          198 SDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD  277 (325)
T ss_dssp             HHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred             hHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            999999999999999 8888754322111  1111111112223455788999999999999999999999999888654


No 161
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=1.5e-41  Score=297.71  Aligned_cols=234  Identities=20%  Similarity=0.256  Sum_probs=186.7

Q ss_pred             CceEEEEeeccc-CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCC---CCCCCH
Q 044846            2 EELWLLKKSKSV-HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDD---QLPITW   77 (290)
Q Consensus         2 ~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~---~~~~~~   77 (290)
                      |+.||+|++... .......+.+|+.+++.++||||+++++++...+..++||||+++|+|.+++......   ...+++
T Consensus        60 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  139 (327)
T 2yfx_A           60 PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM  139 (327)
T ss_dssp             CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCH
T ss_pred             cceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccH
Confidence            457999999643 4555678999999999999999999999999999999999999999999999876421   124889


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEecc---CCcEEEeccccccccccCCc-eeeccceecccccCccc
Q 044846           78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD---KYQAKISDFRTFKSRAIDRT-HLTTQVKVTFGYVDPKY  153 (290)
Q Consensus        78 ~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~---~~~~kl~dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~  153 (290)
                      ..++.++.|++.||.|||+++   |+||||||+||+++.   +..+||+|||++........ .......+++.|+|||+
T Consensus       140 ~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  216 (327)
T 2yfx_A          140 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA  216 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhH
Confidence            999999999999999999999   999999999999984   44699999998764322211 12234567889999999


Q ss_pred             cccCCCCCcccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHhh---hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHH
Q 044846          154 FRSSQFTEKSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYFS---KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV  229 (290)
Q Consensus       154 ~~~~~~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el  229 (290)
                      +.+..++.++||||||+++|+|++ |..|+....... .......   ...+...+..+.++|.+||+.||.+|||+.++
T Consensus       217 ~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l  295 (327)
T 2yfx_A          217 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE-VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII  295 (327)
T ss_dssp             HHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             hcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH-HHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHH
Confidence            999999999999999999999997 777775432221 1111111   11223455679999999999999999999999


Q ss_pred             HHHHHhhHhh
Q 044846          230 TLELAGIRAS  239 (290)
Q Consensus       230 ~~~l~~~~~~  239 (290)
                      +++|+.+...
T Consensus       296 l~~l~~~~~~  305 (327)
T 2yfx_A          296 LERIEYCTQD  305 (327)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHhcC
Confidence            9999988654


No 162
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=7.3e-42  Score=318.51  Aligned_cols=226  Identities=19%  Similarity=0.175  Sum_probs=186.4

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|++...   .......+.+|+.+|+.++||||+++++++.+.+..|+||||++||+|.+++......  .+++.
T Consensus       209 g~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~--~l~e~  286 (576)
T 2acx_A          209 GKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQA--GFPEA  286 (576)
T ss_dssp             CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSC--CCCHH
T ss_pred             CCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCC--CCCHH
Confidence            678999998642   2344667889999999999999999999999999999999999999999999865422  48999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCC
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .++.++.||+.||.|||+++   |+||||||+|||++.+|.+||+|||+++.....  .......||+.|+|||++.+..
T Consensus       287 ~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~--~~~~~~~GT~~Y~APEvl~~~~  361 (576)
T 2acx_A          287 RAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEG--QTIKGRVGTVGYMAPEVVKNER  361 (576)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTT--CCEECCCSCGGGCCHHHHTTCE
T ss_pred             HHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceecccC--ccccccCCCccccCHHHHcCCC
Confidence            99999999999999999999   999999999999999999999999998754322  2233457899999999999989


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhh--hhhhHHH---hhhhhhHHHHHHHHHHHHHhhccCCCCCC-----CHHH
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEE--NRSLAAY---FSKEAEKEEVITFAMVAKRCLNLNGKKQP-----TMKE  228 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-----s~~e  228 (290)
                      ++.++|||||||++|+|++|.+||......  ...+...   .....+...+..+.+||.+||+.||.+||     ++.|
T Consensus       362 ~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~e  441 (576)
T 2acx_A          362 YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSARE  441 (576)
T ss_dssp             ESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHH
T ss_pred             CCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHH
Confidence            999999999999999999999998754221  1111111   11122234567899999999999999999     7899


Q ss_pred             HHHHHH
Q 044846          229 VTLELA  234 (290)
Q Consensus       229 l~~~l~  234 (290)
                      +++|.+
T Consensus       442 il~Hpf  447 (576)
T 2acx_A          442 VKEHPL  447 (576)
T ss_dssp             HHTSGG
T ss_pred             HHhChh
Confidence            988754


No 163
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=2.1e-41  Score=307.90  Aligned_cols=226  Identities=18%  Similarity=0.195  Sum_probs=173.9

Q ss_pred             CceEEEEeecc--cCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-----CcceEEEEeCCCCCHHHHHhhcCCCCCC
Q 044846            2 EELWLLKKSKS--VHESNVEQFINEVVILSQINHRNVVKILGCCLET-----EVPLLVYEFIPNGSLYQYIHEQTDDQLP   74 (290)
Q Consensus         2 ~~~~avK~~~~--~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~   74 (290)
                      |+.||||+++.  ......+++.+|+++|+.++||||+++++++...     +..|+||||+. |+|.+++....    .
T Consensus        51 ~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~----~  125 (432)
T 3n9x_A           51 EKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFKTPI----F  125 (432)
T ss_dssp             TEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECCS-EEHHHHHHSSC----C
T ss_pred             CcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEecCC-cCHHHHHhccC----C
Confidence            67899999975  3344567899999999999999999999999876     56899999994 69999998654    5


Q ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCc------------------
Q 044846           75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRT------------------  136 (290)
Q Consensus        75 ~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~------------------  136 (290)
                      +++..++.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++.......                  
T Consensus       126 l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (432)
T 3n9x_A          126 LTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNK  202 (432)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC-----------------------
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCccccccccccccccccccccccccccc
Confidence            899999999999999999999999   99999999999999999999999999875432211                  


Q ss_pred             ---eeeccceecccccCcccc-ccCCCCCcccchhhHHHHHHHhcC-----------CCCcccchh--------------
Q 044846          137 ---HLTTQVKVTFGYVDPKYF-RSSQFTEKSDVYSFSVVLVELNWT-----------KPIHLVDVE--------------  187 (290)
Q Consensus       137 ---~~~~~~~g~~~y~aPE~~-~~~~~~~~~DiwS~G~il~~l~~~-----------~~~~~~~~~--------------  187 (290)
                         .......||+.|+|||++ ....++.++||||+||++|||++|           .++|.....              
T Consensus       203 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~  282 (432)
T 3n9x_A          203 NLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHE  282 (432)
T ss_dssp             --------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CH
T ss_pred             chhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccc
Confidence               123456789999999986 556799999999999999999974           333322110              


Q ss_pred             --hhhhhHHH---hhh------------------------------hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 044846          188 --ENRSLAAY---FSK------------------------------EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLE  232 (290)
Q Consensus       188 --~~~~~~~~---~~~------------------------------~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~  232 (290)
                        ....+...   ...                              ......+..+.+||.+||+.||.+|||++|+++|
T Consensus       283 ~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  362 (432)
T 3n9x_A          283 KSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDH  362 (432)
T ss_dssp             HHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTC
T ss_pred             cchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence              00000000   000                              0001245678999999999999999999999988


Q ss_pred             HHh
Q 044846          233 LAG  235 (290)
Q Consensus       233 l~~  235 (290)
                      .+-
T Consensus       363 p~f  365 (432)
T 3n9x_A          363 PYL  365 (432)
T ss_dssp             GGG
T ss_pred             hhh
Confidence            543


No 164
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.8e-42  Score=305.96  Aligned_cols=228  Identities=21%  Similarity=0.209  Sum_probs=183.8

Q ss_pred             CceEEEEeeccc----CchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCC
Q 044846            2 EELWLLKKSKSV----HESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPIT   76 (290)
Q Consensus         2 ~~~~avK~~~~~----~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~   76 (290)
                      |+.||||+++..    .....+.+.+|+++++.+ +||||+++++++...+..++||||+++|+|.+++....    .++
T Consensus        82 ~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~  157 (355)
T 1vzo_A           82 GKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE----RFT  157 (355)
T ss_dssp             TCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHS----CCC
T ss_pred             CeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcC----CCC
Confidence            678999998642    223455678899999999 79999999999999999999999999999999998765    589


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCcccccc
Q 044846           77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRS  156 (290)
Q Consensus        77 ~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~  156 (290)
                      +..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++..............||+.|+|||++.+
T Consensus       158 ~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~  234 (355)
T 1vzo_A          158 EHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG  234 (355)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcC
Confidence            9999999999999999999999   9999999999999999999999999987544333333445678999999999986


Q ss_pred             C--CCCCcccchhhHHHHHHHhcCCCCcccchhh--hhhhH-HHh--hhhhhHHHHHHHHHHHHHhhccCCCCCC-----
Q 044846          157 S--QFTEKSDVYSFSVVLVELNWTKPIHLVDVEE--NRSLA-AYF--SKEAEKEEVITFAMVAKRCLNLNGKKQP-----  224 (290)
Q Consensus       157 ~--~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~--~~~~~-~~~--~~~~~~~~~~~~~~li~~cl~~dp~~Rp-----  224 (290)
                      .  .++.++|||||||++|+|++|..||......  ...+. ...  ....+...+..+.+||.+||+.||.+||     
T Consensus       235 ~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~  314 (355)
T 1vzo_A          235 GDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPR  314 (355)
T ss_dssp             CC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTT
T ss_pred             CCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCC
Confidence            3  4788999999999999999999988643211  11111 111  1122234456789999999999999999     


Q ss_pred             CHHHHHHHHHhh
Q 044846          225 TMKEVTLELAGI  236 (290)
Q Consensus       225 s~~el~~~l~~~  236 (290)
                      |+.|++++....
T Consensus       315 s~~ell~h~~f~  326 (355)
T 1vzo_A          315 DADEIKEHLFFQ  326 (355)
T ss_dssp             THHHHHTSGGGT
T ss_pred             CHHHHHcCcchh
Confidence            999999887543


No 165
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=6.4e-42  Score=305.35  Aligned_cols=217  Identities=18%  Similarity=0.240  Sum_probs=169.8

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHH-HHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVI-LSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW   77 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~-l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~   77 (290)
                      |+.||+|+++..   .......+.+|..+ ++.++||||++++++|...+..|+||||++||+|..++....    .+++
T Consensus        63 ~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~----~~~~  138 (373)
T 2r5t_A           63 EVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRER----CFLE  138 (373)
T ss_dssp             CCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS----SCCH
T ss_pred             CCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcC----CCCH
Confidence            578999998643   23345567778877 466899999999999999999999999999999999998765    5889


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccC
Q 044846           78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSS  157 (290)
Q Consensus        78 ~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  157 (290)
                      ..++.++.||+.||.|||+++   |+||||||+|||++.+|.+||+|||+++..... ........||+.|+|||++.+.
T Consensus       139 ~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~  214 (373)
T 2r5t_A          139 PRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEH-NSTTSTFCGTPEYLAPEVLHKQ  214 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC-CCCCCSBSCCCCCCCHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCccccccccC-CCccccccCCccccCHHHhCCC
Confidence            999999999999999999999   999999999999999999999999998753221 2233456789999999999999


Q ss_pred             CCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh--hhhHHHHHHHHHHHHHhhccCCCCCCCHH
Q 044846          158 QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK--EAEKEEVITFAMVAKRCLNLNGKKQPTMK  227 (290)
Q Consensus       158 ~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~dp~~Rps~~  227 (290)
                      .++.++|+|||||++|||++|.+||....... ........  ..+...+..+.+||.+||+.||.+||++.
T Consensus       215 ~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~  285 (373)
T 2r5t_A          215 PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-MYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAK  285 (373)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH-HHHHHHHSCCCCCSSSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred             CCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHhcccCCCCCCCHHHHHHHHHHcccCHHhCCCCC
Confidence            99999999999999999999999886543221 11111111  11233556789999999999999999974


No 166
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=4.4e-42  Score=302.39  Aligned_cols=220  Identities=18%  Similarity=0.236  Sum_probs=181.8

Q ss_pred             CceEEEEeecccC--------chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCC-CHHHHHhhcCCCC
Q 044846            2 EELWLLKKSKSVH--------ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNG-SLYQYIHEQTDDQ   72 (290)
Q Consensus         2 ~~~~avK~~~~~~--------~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~   72 (290)
                      |+.||+|+++...        ....+.+.+|+.+++.++||||+++++++...+..++||||+.+| +|.+++....   
T Consensus        49 ~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~---  125 (335)
T 3dls_A           49 NKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHP---  125 (335)
T ss_dssp             TEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCC---
T ss_pred             CcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcC---
Confidence            6789999987532        123446788999999999999999999999999999999999766 9999998654   


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCcc
Q 044846           73 LPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPK  152 (290)
Q Consensus        73 ~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE  152 (290)
                       .+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++.....  .......||+.|+|||
T Consensus       126 -~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE  199 (335)
T 3dls_A          126 -RLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG--KLFYTFCGTIEYCAPE  199 (335)
T ss_dssp             -CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTT--CCBCEECSCGGGCCHH
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeecccceECCCC--CceeccCCCccccChh
Confidence             5899999999999999999999999   999999999999999999999999998654322  2233466899999999


Q ss_pred             ccccCCC-CCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 044846          153 YFRSSQF-TEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTL  231 (290)
Q Consensus       153 ~~~~~~~-~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~  231 (290)
                      ++.+..+ +.++|||||||++|+|++|..||.........     ....+...+..+.+||.+||+.||++|||+.++++
T Consensus       200 ~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-----~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~  274 (335)
T 3dls_A          200 VLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEA-----AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVT  274 (335)
T ss_dssp             HHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTTT-----CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHhh-----ccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            9988876 77899999999999999999988643221110     01112224567899999999999999999999998


Q ss_pred             HHHh
Q 044846          232 ELAG  235 (290)
Q Consensus       232 ~l~~  235 (290)
                      +.+-
T Consensus       275 hp~~  278 (335)
T 3dls_A          275 DPWV  278 (335)
T ss_dssp             CTTT
T ss_pred             Cccc
Confidence            8653


No 167
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=1.8e-41  Score=297.25  Aligned_cols=230  Identities=20%  Similarity=0.320  Sum_probs=181.9

Q ss_pred             EEEEeecc-cCchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcC------------C
Q 044846            5 WLLKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQT------------D   70 (290)
Q Consensus         5 ~avK~~~~-~~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~------------~   70 (290)
                      +|+|+++. ......+.+.+|+++++.+ +||||+++++++...+..++||||+++|+|.+++....            .
T Consensus        55 v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  134 (327)
T 1fvr_A           55 AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS  134 (327)
T ss_dssp             EEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTT
T ss_pred             eeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCCCCCHHHHHHhccccccccccccccc
Confidence            48888864 3344566799999999999 99999999999999999999999999999999998653            1


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccC
Q 044846           71 DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVD  150 (290)
Q Consensus        71 ~~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~a  150 (290)
                      ....+++..++.++.||+.||.|||+++   |+||||||+||+++.++.+||+|||+++....  ........+++.|+|
T Consensus       135 ~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~--~~~~~~~~~~~~y~a  209 (327)
T 1fvr_A          135 TASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSRGQEV--YVKKTMGRLPVRWMA  209 (327)
T ss_dssp             BSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEESSCE--ECCC----CCTTTCC
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeEEEcccCcCccccc--cccccCCCCCccccC
Confidence            2236899999999999999999999999   99999999999999999999999999763221  111233456788999


Q ss_pred             ccccccCCCCCcccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHh---hhhhhHHHHHHHHHHHHHhhccCCCCCCCH
Q 044846          151 PKYFRSSQFTEKSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYF---SKEAEKEEVITFAMVAKRCLNLNGKKQPTM  226 (290)
Q Consensus       151 PE~~~~~~~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  226 (290)
                      ||++.+..++.++||||||+++|+|++ |..|+....... ......   ....+...+..+.+||.+||+.||.+|||+
T Consensus       210 PE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~  288 (327)
T 1fvr_A          210 IESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-LYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSF  288 (327)
T ss_dssp             HHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             hhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH-HHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCH
Confidence            999998889999999999999999997 888775432221 111111   112223445779999999999999999999


Q ss_pred             HHHHHHHHhhHhhh
Q 044846          227 KEVTLELAGIRASI  240 (290)
Q Consensus       227 ~el~~~l~~~~~~~  240 (290)
                      .+++++|+.+....
T Consensus       289 ~ell~~L~~~~~~~  302 (327)
T 1fvr_A          289 AQILVSLNRMLEER  302 (327)
T ss_dssp             HHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999887654


No 168
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=1.5e-41  Score=313.14  Aligned_cols=224  Identities=21%  Similarity=0.191  Sum_probs=185.5

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||||++...   .....+.+.+|+.+++.++||||+++++++...+..++|||||.+|+|.+++....    .+++.
T Consensus        51 ~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~  126 (484)
T 3nyv_A           51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK----RFSEV  126 (484)
T ss_dssp             CCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCS----CCBHH
T ss_pred             CCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcC----CCCHH
Confidence            678999998542   24457789999999999999999999999999999999999999999999998654    58999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEe---ccCCcEEEeccccccccccCCceeeccceecccccCccccc
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL---VDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFR  155 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~  155 (290)
                      .+..++.||+.||.|||+++   |+||||||+|||+   +.++.+||+|||+++.....  .......||+.|+|||++.
T Consensus       127 ~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~  201 (484)
T 3nyv_A          127 DAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS--KKMKDKIGTAYYIAPEVLH  201 (484)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCC--CSHHHHTTGGGTCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccc--cccccCCCCccccCceeec
Confidence            99999999999999999999   9999999999999   46789999999997654322  2234456899999999987


Q ss_pred             cCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHH
Q 044846          156 SSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEV  229 (290)
Q Consensus       156 ~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el  229 (290)
                      + .++.++||||+||++|+|++|.+||........ ......      .+.....+..+.+||.+||+.||.+|||+.|+
T Consensus       202 ~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~  279 (484)
T 3nyv_A          202 G-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDI-LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDA  279 (484)
T ss_dssp             T-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             C-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence            6 689999999999999999999999865433221 111111      12223456789999999999999999999999


Q ss_pred             HHHHHhh
Q 044846          230 TLELAGI  236 (290)
Q Consensus       230 ~~~l~~~  236 (290)
                      ++|.+-.
T Consensus       280 l~h~~~~  286 (484)
T 3nyv_A          280 LDHEWIQ  286 (484)
T ss_dssp             HTSHHHH
T ss_pred             hhChhhc
Confidence            9886543


No 169
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=6.1e-42  Score=300.01  Aligned_cols=228  Identities=19%  Similarity=0.280  Sum_probs=174.7

Q ss_pred             CceEEEEeecccCchh-HHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            2 EELWLLKKSKSVHESN-VEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~-~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      |+.||+|+++...... ...+.+|+++++.++||||+++++++...+..++||||+. |+|.+++.....   .+++..+
T Consensus        27 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~---~~~~~~~  102 (324)
T 3mtl_A           27 DNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGN---IINMHNV  102 (324)
T ss_dssp             CCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EEHHHHHHHTTT---CCCHHHH
T ss_pred             CcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cCHHHHHHhcCC---CCCHHHH
Confidence            6789999987533222 2245689999999999999999999999999999999996 699999987543   5889999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCcccccc-CCC
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRS-SQF  159 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~  159 (290)
                      ..++.||+.||.|||+++   |+||||||+||+++.++.+||+|||++....... .......||+.|+|||++.+ ..+
T Consensus       103 ~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~  178 (324)
T 3mtl_A          103 KLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT-KTYDNEVVTLWYRPPDILLGSTDY  178 (324)
T ss_dssp             HHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC-------------CGGGCCHHHHTTCCCC
T ss_pred             HHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCCc-cccccccCcccccChhhhcCCCCC
Confidence            999999999999999999   9999999999999999999999999976433221 22234567999999999876 568


Q ss_pred             CCcccchhhHHHHHHHhcCCCCcccchhhhhhhH--HHhh-----------------------------hhhhHHHHHHH
Q 044846          160 TEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLA--AYFS-----------------------------KEAEKEEVITF  208 (290)
Q Consensus       160 ~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~--~~~~-----------------------------~~~~~~~~~~~  208 (290)
                      +.++|||||||++|+|++|.+||...........  ....                             .......+..+
T Consensus       179 ~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (324)
T 3mtl_A          179 STQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDG  258 (324)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHH
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHH
Confidence            9999999999999999999998865432211110  0000                             00011234678


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHHhhH
Q 044846          209 AMVAKRCLNLNGKKQPTMKEVTLELAGIR  237 (290)
Q Consensus       209 ~~li~~cl~~dp~~Rps~~el~~~l~~~~  237 (290)
                      .+||.+||+.||.+|||++|++++.+-..
T Consensus       259 ~~li~~~L~~dP~~R~t~~e~l~hp~f~~  287 (324)
T 3mtl_A          259 ADLLTKLLQFEGRNRISAEDAMKHPFFLS  287 (324)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred             HHHHHHHcCcCcccCCCHHHHhcChhhhh
Confidence            89999999999999999999998866543


No 170
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=2.4e-41  Score=288.95  Aligned_cols=226  Identities=23%  Similarity=0.264  Sum_probs=183.8

Q ss_pred             CceEEEEeeccc-CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            2 EELWLLKKSKSV-HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         2 ~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      |+.||+|+++.. .....+.+.+|+.+++.++||||+++++++...+..++||||+++++|.+++....    .+++..+
T Consensus        32 ~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~  107 (276)
T 2yex_A           32 EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDA  107 (276)
T ss_dssp             CCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTT----BCCHHHH
T ss_pred             CcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhcc----CCCHHHH
Confidence            678999998643 34456789999999999999999999999999999999999999999999987543    5899999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCC-ceeeccceecccccCccccccCCC
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDR-THLTTQVKVTFGYVDPKYFRSSQF  159 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~  159 (290)
                      ..++.|++.||.|||+++   |+||||||+||+++.++.+||+|||.+....... ........|+..|+|||++.+..+
T Consensus       108 ~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  184 (276)
T 2yex_A          108 QRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF  184 (276)
T ss_dssp             HHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSB
T ss_pred             HHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCC
Confidence            999999999999999999   9999999999999999999999999976543221 122344568899999999987765


Q ss_pred             -CCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh----hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          160 -TEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS----KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       160 -~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                       +.++||||||+++|+|++|..||...............    .......+..+.+||.+||+.||.+|||+.|++++.+
T Consensus       185 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~  264 (276)
T 2yex_A          185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRW  264 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTT
T ss_pred             CCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCcc
Confidence             67899999999999999999988654332222221111    1112234667899999999999999999999987643


No 171
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=2.6e-41  Score=291.48  Aligned_cols=228  Identities=21%  Similarity=0.259  Sum_probs=182.1

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      |+.||+|++........+.+.+|+.+++.++||||+++++++...+..++||||+++++|.+++..... ...+++..+.
T Consensus        47 ~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~  125 (295)
T 2clq_A           47 QVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWG-PLKDNEQTIG  125 (295)
T ss_dssp             CCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTC-CCTTCHHHHH
T ss_pred             CeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhcc-CCCccHHHHH
Confidence            578999999876667778899999999999999999999999999999999999999999999987532 2356788899


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEecc-CCcEEEeccccccccccCCceeeccceecccccCccccccCC--
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD-KYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ--  158 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--  158 (290)
                      .++.|++.||.|||+++   |+||||||+||+++. ++.+||+|||++...... ........|+..|+|||++.+..  
T Consensus       126 ~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~  201 (295)
T 2clq_A          126 FYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI-NPCTETFTGTLQYMAPEIIDKGPRG  201 (295)
T ss_dssp             HHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC------CCCCCCGGGCCHHHHHHGGGG
T ss_pred             HHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCC-CCcccccCCCccccChhhhcCCCCC
Confidence            99999999999999999   999999999999987 899999999997654321 12233456899999999987653  


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHH----hhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAY----FSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      ++.++||||||+++|+|++|..|+.............    .....+...+..+.++|.+||+.||++|||+.+++.+-.
T Consensus       202 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~  281 (295)
T 2clq_A          202 YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEF  281 (295)
T ss_dssp             CSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGG
T ss_pred             CCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence            7889999999999999999999886432222111111    011222345677899999999999999999999987643


No 172
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=6.1e-41  Score=287.59  Aligned_cols=223  Identities=21%  Similarity=0.247  Sum_probs=180.9

Q ss_pred             CceEEEEeecccCc------hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCC
Q 044846            2 EELWLLKKSKSVHE------SNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPI   75 (290)
Q Consensus         2 ~~~~avK~~~~~~~------~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~   75 (290)
                      |+.||+|+++....      ...+.+.+|+.+++.++||||+++++++...+..++||||+++++|.+++....    .+
T Consensus        30 ~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~  105 (283)
T 3bhy_A           30 GKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE----SL  105 (283)
T ss_dssp             CCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS----SC
T ss_pred             CCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEeecCCCcHHHHHHhcC----CC
Confidence            67899999864321      236789999999999999999999999999999999999999999999998754    58


Q ss_pred             CHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCC----cEEEeccccccccccCCceeeccceecccccCc
Q 044846           76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY----QAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDP  151 (290)
Q Consensus        76 ~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~----~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aP  151 (290)
                      ++..+..++.|++.||.|||+++   |+||||||+||+++.++    .+||+|||++......  .......|++.|+||
T Consensus       106 ~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aP  180 (283)
T 3bhy_A          106 TEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG--NEFKNIFGTPEFVAP  180 (283)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC----------CCCGGGCCH
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEecccceeccCC--CcccccCCCcCccCc
Confidence            99999999999999999999999   99999999999998877    8999999997643321  222345688999999


Q ss_pred             cccccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------hhhhHHHHHHHHHHHHHhhccCCCCCCC
Q 044846          152 KYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------KEAEKEEVITFAMVAKRCLNLNGKKQPT  225 (290)
Q Consensus       152 E~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~Rps  225 (290)
                      |++.+..++.++||||||+++|+|++|..|+........ ......      .......+..+.+++.+||+.||++|||
T Consensus       181 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps  259 (283)
T 3bhy_A          181 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET-LTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMT  259 (283)
T ss_dssp             HHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCC
T ss_pred             ceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHH-HHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcC
Confidence            999999999999999999999999999998865432211 111111      1111234567899999999999999999


Q ss_pred             HHHHHHHHH
Q 044846          226 MKEVTLELA  234 (290)
Q Consensus       226 ~~el~~~l~  234 (290)
                      +.|++++.+
T Consensus       260 ~~~~l~h~~  268 (283)
T 3bhy_A          260 IAQSLEHSW  268 (283)
T ss_dssp             HHHHHHCHH
T ss_pred             HHHHHhCHH
Confidence            999998743


No 173
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=4.4e-41  Score=310.68  Aligned_cols=223  Identities=21%  Similarity=0.215  Sum_probs=182.2

Q ss_pred             CceEEEEeecccC--chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKSVH--ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.||+|+++...  ......+.+|+.+++.++||||++++++|...+..|+|||||++|+|.+++....    .+++..
T Consensus        62 ~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~----~~~~~~  137 (494)
T 3lij_A           62 HVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRM----KFNEVD  137 (494)
T ss_dssp             CCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS----SCCHHH
T ss_pred             CcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHHcC----CCCHHH
Confidence            5679999986432  3446778999999999999999999999999999999999999999999998765    589999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEecc---CCcEEEeccccccccccCCceeeccceecccccCcccccc
Q 044846           80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD---KYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRS  156 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~  156 (290)
                      +..++.||+.||.|||+++   |+||||||+|||++.   ++.+||+|||++......  .......||+.|+|||++. 
T Consensus       138 ~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~--~~~~~~~gt~~y~aPE~l~-  211 (494)
T 3lij_A          138 AAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ--KKMKERLGTAYYIAPEVLR-  211 (494)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT--BCBCCCCSCTTTCCHHHHT-
T ss_pred             HHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC--ccccccCCCcCeeCHHHHc-
Confidence            9999999999999999999   999999999999976   455999999998654322  2234467899999999986 


Q ss_pred             CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHH
Q 044846          157 SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVT  230 (290)
Q Consensus       157 ~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~  230 (290)
                      ..++.++||||+||++|+|++|.+||........ ......      .......+..+.+||.+||+.||.+|||+.|++
T Consensus       212 ~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l  290 (494)
T 3lij_A          212 KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEI-LRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQAL  290 (494)
T ss_dssp             TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHh
Confidence            5689999999999999999999999865433221 111111      122234567799999999999999999999999


Q ss_pred             HHHHh
Q 044846          231 LELAG  235 (290)
Q Consensus       231 ~~l~~  235 (290)
                      +|.+-
T Consensus       291 ~hp~~  295 (494)
T 3lij_A          291 EHPWI  295 (494)
T ss_dssp             TCHHH
T ss_pred             cCccc
Confidence            87543


No 174
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=5.1e-41  Score=305.01  Aligned_cols=224  Identities=19%  Similarity=0.193  Sum_probs=180.7

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhc------CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCC
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQI------NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPI   75 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l------~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~   75 (290)
                      |+.||||+++. .....+.+.+|+++++.+      +|+||+++++++...+..++||||+ +++|.+++......  .+
T Consensus       122 ~~~vAvK~~~~-~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~--~~  197 (429)
T 3kvw_A          122 HQHVALKMVRN-EKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQ--GF  197 (429)
T ss_dssp             TEEEEEEEECS-CHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTC--CC
T ss_pred             CcEEEEEEECC-ccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEecc-CCCHHHHHHhccCC--CC
Confidence            67899999975 344456788899998887      5779999999999999999999999 46999999876533  48


Q ss_pred             CHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCc--EEEeccccccccccCCceeeccceecccccCccc
Q 044846           76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ--AKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKY  153 (290)
Q Consensus        76 ~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~--~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~  153 (290)
                      ++..++.++.||+.||.|||+++   |+||||||+|||++.++.  +||+|||++.....    ......||+.|+|||+
T Consensus       198 ~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~----~~~~~~gt~~y~aPE~  270 (429)
T 3kvw_A          198 SLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ----RVYTYIQSRFYRAPEV  270 (429)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTCEETTC----CCCSSCSCGGGCCHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecccceecCC----cccccCCCCCccChHH
Confidence            99999999999999999999999   999999999999999887  99999999864332    2234678999999999


Q ss_pred             cccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhh--HHHhhhh--------------------------------
Q 044846          154 FRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSL--AAYFSKE--------------------------------  199 (290)
Q Consensus       154 ~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~--~~~~~~~--------------------------------  199 (290)
                      +.+..++.++|||||||++|+|++|.+||..........  .......                                
T Consensus       271 ~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (429)
T 3kvw_A          271 ILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDG  350 (429)
T ss_dssp             HHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC-
T ss_pred             HhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccc
Confidence            999999999999999999999999999886543321111  0000000                                


Q ss_pred             --------------------------hhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 044846          200 --------------------------AEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGI  236 (290)
Q Consensus       200 --------------------------~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~  236 (290)
                                                .....+..+.+||.+||+.||++|||+.|+++|.+-.
T Consensus       351 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~  413 (429)
T 3kvw_A          351 SVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLR  413 (429)
T ss_dssp             -CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC
T ss_pred             cccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhc
Confidence                                      0001145689999999999999999999999886543


No 175
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=3.4e-41  Score=299.86  Aligned_cols=230  Identities=13%  Similarity=0.178  Sum_probs=185.7

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcC---CCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCC-CCCCCCH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQIN---HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD-DQLPITW   77 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~---Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~   77 (290)
                      |+.||+|+++...   ...+..|+++++.+.   |+||+++++++...+..++|||||++|+|.+++..... ....+++
T Consensus        95 ~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~  171 (365)
T 3e7e_A           95 KQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQ  171 (365)
T ss_dssp             CCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCH
T ss_pred             CcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCH
Confidence            6789999997543   446778888888886   99999999999999999999999999999999975322 1236999


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEecc-----------CCcEEEecccccccccc-CCceeeccceec
Q 044846           78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD-----------KYQAKISDFRTFKSRAI-DRTHLTTQVKVT  145 (290)
Q Consensus        78 ~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~-----------~~~~kl~dfg~~~~~~~-~~~~~~~~~~g~  145 (290)
                      ..++.++.||+.||.|||+++   |+||||||+|||++.           ++.+||+|||+++.... ..........||
T Consensus       172 ~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt  248 (365)
T 3e7e_A          172 GLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCET  248 (365)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCT
T ss_pred             HHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCC
Confidence            999999999999999999999   999999999999998           89999999999865331 223344556799


Q ss_pred             ccccCccccccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhhhhhHHHHHHHHHHHHHhhccCCCCC-C
Q 044846          146 FGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQ-P  224 (290)
Q Consensus       146 ~~y~aPE~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R-p  224 (290)
                      +.|+|||++.+..++.++|||||||++|+|++|..||.................   .....+.+++.+||+.+|.+| |
T Consensus       249 ~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~p~~r~~  325 (365)
T 3e7e_A          249 SGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRL---PHLDMWNEFFHVMLNIPDCHHLP  325 (365)
T ss_dssp             TSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEEECSCCTTC---SSHHHHHHHHHHHHCCCCTTCCC
T ss_pred             CCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCceeechhcccc---CcHHHHHHHHHHHcCCCCCCcch
Confidence            999999999999999999999999999999999988865433221111111111   224567889999999999999 5


Q ss_pred             CHHHHHHHHHhhHhhh
Q 044846          225 TMKEVTLELAGIRASI  240 (290)
Q Consensus       225 s~~el~~~l~~~~~~~  240 (290)
                      ++.++.+.|+......
T Consensus       326 ~~~~l~~~l~~~l~~~  341 (365)
T 3e7e_A          326 SLDLLRQKLKKVFQQH  341 (365)
T ss_dssp             CHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            6888888888776543


No 176
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=8.4e-41  Score=287.95  Aligned_cols=224  Identities=18%  Similarity=0.281  Sum_probs=180.7

Q ss_pred             CceEEEEeecc--cCchhHHHHHHHHHHHHhcCCCceeeEEeEEEe----CCcceEEEEeCCCCCHHHHHhhcCCCCCCC
Q 044846            2 EELWLLKKSKS--VHESNVEQFINEVVILSQINHRNVVKILGCCLE----TEVPLLVYEFIPNGSLYQYIHEQTDDQLPI   75 (290)
Q Consensus         2 ~~~~avK~~~~--~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~   75 (290)
                      ++.||+|++..  ......+.+.+|+.+++.++||||+++++++..    ....++||||+++|+|.+++....    .+
T Consensus        51 ~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~  126 (290)
T 1t4h_A           51 TVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK----VM  126 (290)
T ss_dssp             CCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHS----SC
T ss_pred             ceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHcc----CC
Confidence            56789998864  345567789999999999999999999999875    356899999999999999998765    58


Q ss_pred             CHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEec-cCCcEEEeccccccccccCCceeeccceecccccCcccc
Q 044846           76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLV-DKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYF  154 (290)
Q Consensus        76 ~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~  154 (290)
                      ++..++.++.|++.||.|||+.+. +|+||||||+||+++ .++.+||+|||++......   ......|++.|+|||++
T Consensus       127 ~~~~~~~~~~qi~~~l~~lH~~~~-~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~t~~y~aPE~~  202 (290)
T 1t4h_A          127 KIKVLRSWCRQILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS---FAKAVIGTPEFMAPEMY  202 (290)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTSSS-CCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT---SBEESCSSCCCCCGGGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHcCCC-CEEECCCCHHHEEEECCCCCEEEeeCCCccccccc---ccccccCCcCcCCHHHH
Confidence            899999999999999999999863 399999999999998 7899999999997643322   22345689999999988


Q ss_pred             ccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh----hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHH
Q 044846          155 RSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK----EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVT  230 (290)
Q Consensus       155 ~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~  230 (290)
                      . ..++.++||||||+++|+|++|..||................    ......+..+.+||.+||+.||.+|||+.|++
T Consensus       203 ~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell  281 (290)
T 1t4h_A          203 E-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL  281 (290)
T ss_dssp             G-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             h-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence            6 458999999999999999999998886533332222222111    12223346799999999999999999999999


Q ss_pred             HHHH
Q 044846          231 LELA  234 (290)
Q Consensus       231 ~~l~  234 (290)
                      ++.+
T Consensus       282 ~h~~  285 (290)
T 1t4h_A          282 NHAF  285 (290)
T ss_dssp             TSGG
T ss_pred             hCcc
Confidence            7654


No 177
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=6.7e-42  Score=302.02  Aligned_cols=223  Identities=19%  Similarity=0.204  Sum_probs=180.2

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      |+.||+|+++.....    ..+|++++..+ +||||+++++++.+.+..|+|||||.+|+|.+++....    .+++..+
T Consensus        47 ~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~----~~~~~~~  118 (342)
T 2qr7_A           47 NMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK----FFSEREA  118 (342)
T ss_dssp             TEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCT----TCCHHHH
T ss_pred             CCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcC----CCCHHHH
Confidence            678999999754332    34788899888 89999999999999999999999999999999998654    5899999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccC----CcEEEeccccccccccCCceeeccceecccccCcccccc
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDK----YQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRS  156 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~----~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~  156 (290)
                      ..++.||+.||.|||+++   |+||||||+|||+...    +.+||+|||+++...... .......||+.|+|||++.+
T Consensus       119 ~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~  194 (342)
T 2qr7_A          119 SAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN-GLLMTPCYTANFVAPEVLER  194 (342)
T ss_dssp             HHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT-CCBCCSSCCSSCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC-CceeccCCCccccCHHHhcC
Confidence            999999999999999999   9999999999998543    359999999987543222 22344678999999999988


Q ss_pred             CCCCCcccchhhHHHHHHHhcCCCCcccchh--hhhhhHHHhh------hhhhHHHHHHHHHHHHHhhccCCCCCCCHHH
Q 044846          157 SQFTEKSDVYSFSVVLVELNWTKPIHLVDVE--ENRSLAAYFS------KEAEKEEVITFAMVAKRCLNLNGKKQPTMKE  228 (290)
Q Consensus       157 ~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~--~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~e  228 (290)
                      ..++.++|||||||++|+|++|.+||.....  ..........      .......+..+.+||.+||+.||++|||+.+
T Consensus       195 ~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~  274 (342)
T 2qr7_A          195 QGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAAL  274 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             CCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHH
Confidence            8889999999999999999999998864321  1111111111      1112345678999999999999999999999


Q ss_pred             HHHHHHhh
Q 044846          229 VTLELAGI  236 (290)
Q Consensus       229 l~~~l~~~  236 (290)
                      +++|.+-.
T Consensus       275 il~hp~~~  282 (342)
T 2qr7_A          275 VLRHPWIV  282 (342)
T ss_dssp             HTTSHHHH
T ss_pred             HhcCCeec
Confidence            99887653


No 178
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=2.6e-41  Score=290.31  Aligned_cols=224  Identities=19%  Similarity=0.186  Sum_probs=184.6

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|++...   .....+.+.+|+++++.++||||+++++++...+..++||||+++|+|.+++....    .+++.
T Consensus        39 ~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~  114 (284)
T 2vgo_A           39 KFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG----RFDEQ  114 (284)
T ss_dssp             TEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHS----SCCHH
T ss_pred             CcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcC----CCCHH
Confidence            567999998642   22335678999999999999999999999999999999999999999999998765    58999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCC
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .+..++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++......   ......|+..|+|||++.+..
T Consensus       115 ~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~  188 (284)
T 2vgo_A          115 RSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSL---RRRTMCGTLDYLPPEMIEGKT  188 (284)
T ss_dssp             HHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSSS---CBCCCCSCGGGCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCccc---ccccccCCCCcCCHHHhccCC
Confidence            99999999999999999999   999999999999999999999999987543321   123456889999999999999


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHh--hhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYF--SKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGI  236 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~  236 (290)
                      ++.++||||||+++|+|++|..|+........ .....  ....+...+..+.++|.+||+.||.+|||+.+++++.+-.
T Consensus       189 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~  267 (284)
T 2vgo_A          189 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET-HRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK  267 (284)
T ss_dssp             BCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHTTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHH
T ss_pred             CCcccchhhHHHHHHHHHHCCCCCCCCCHhHH-HHHHhccccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHH
Confidence            99999999999999999999998864432211 11111  1112233456789999999999999999999999876543


No 179
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=1.1e-41  Score=291.65  Aligned_cols=225  Identities=21%  Similarity=0.238  Sum_probs=162.7

Q ss_pred             CceEEEEeecccC---chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSVH---ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|++....   ....+.+.+|+++++.++||||+++++++...+..++||||+++++|.+++.....   .+++.
T Consensus        36 ~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~  112 (278)
T 3cok_A           36 GLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK---PFSEN  112 (278)
T ss_dssp             CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSS---CCCHH
T ss_pred             CceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccC---CCCHH
Confidence            6789999986422   23357899999999999999999999999999999999999999999999986532   58999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCC
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .++.++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++....... .......|++.|+|||++.+..
T Consensus       113 ~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~  188 (278)
T 3cok_A          113 EARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH-EKHYTLCGTPNYISPEIATRSA  188 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC--------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccCCC-CcceeccCCCCcCCcchhcCCC
Confidence            99999999999999999999   9999999999999999999999999976543221 1223456889999999999888


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh--hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS--KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      ++.++||||||+++|+|++|.+|+........ ......  ...+...+..+.++|.+||+.||++|||+.+++++.+
T Consensus       189 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~  265 (278)
T 3cok_A          189 HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-LNKVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPF  265 (278)
T ss_dssp             ---CTHHHHHHHHHHHHHHSSCSSCCCSCC------CCSSCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTT
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-HHHHhhcccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCcc
Confidence            99999999999999999999998864322111 111000  0112234567899999999999999999999987654


No 180
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=4.9e-41  Score=289.97  Aligned_cols=227  Identities=19%  Similarity=0.202  Sum_probs=186.5

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|++...   .....+.+.+|+.+++.++||||+++++++...+..++||||+.+++|.+++....    .+++.
T Consensus        40 ~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~  115 (294)
T 2rku_A           40 KEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK----ALTEP  115 (294)
T ss_dssp             CCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHC----SCCHH
T ss_pred             CceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHhcC----CCCHH
Confidence            578999988642   34557789999999999999999999999999999999999999999999998765    58999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCC
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .++.++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++....... .......|++.|+|||++.+..
T Consensus       116 ~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~  191 (294)
T 2rku_A          116 EARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-ERKKVLCGTPNYIAPEVLSKKG  191 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCSTT-CCBCCCCSCCSSCCHHHHTTSC
T ss_pred             HHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceecccCc-cccccccCCCCcCCcchhccCC
Confidence            99999999999999999999   9999999999999999999999999986543221 2223456889999999999988


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHh-hhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYF-SKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGI  236 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~  236 (290)
                      ++.++||||||+++|+|++|..|+.............. ....+...+..+.+++.+||+.||++|||+.|++++..-.
T Consensus       192 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~  270 (294)
T 2rku_A          192 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFT  270 (294)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHH
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCccccCHHHHHHHHHHcccChhhCcCHHHHhhChhee
Confidence            99999999999999999999998865432221111110 1111223456789999999999999999999999876543


No 181
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=1.4e-41  Score=294.16  Aligned_cols=225  Identities=20%  Similarity=0.259  Sum_probs=178.8

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      |+.||+|++........+.+.+|+++++.++||||+++++++...+..++||||+++++|.+++.....   .+++..+.
T Consensus        44 ~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~  120 (302)
T 2j7t_A           44 GALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDR---GLTEPQIQ  120 (302)
T ss_dssp             CCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTS---CCCHHHHH
T ss_pred             CcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhcc---CCCHHHHH
Confidence            678999999877777788999999999999999999999999999999999999999999999876543   58999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccc-----c
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFR-----S  156 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~  156 (290)
                      .++.|++.||.|||+++   ++||||||+||+++.++.+||+|||++...... ........|+..|+|||++.     +
T Consensus       121 ~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~  196 (302)
T 2j7t_A          121 VVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-LQKRDSFIGTPYWMAPEVVMCETMKD  196 (302)
T ss_dssp             HHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-HHC-----CCGGGCCHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCcccccc-ccccccccCChhhcCCeeeccccCCC
Confidence            99999999999999999   999999999999999999999999986432111 11123356889999999983     5


Q ss_pred             CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh-----hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 044846          157 SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK-----EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTL  231 (290)
Q Consensus       157 ~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~  231 (290)
                      ..++.++||||||+++|+|++|.+|+......... ......     ..+...+..+.++|.+||+.||.+|||+.++++
T Consensus       197 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          197 TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL-LKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             TTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-HHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             CCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH-HHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            67889999999999999999999888644322211 111111     112344667999999999999999999999987


Q ss_pred             HHH
Q 044846          232 ELA  234 (290)
Q Consensus       232 ~l~  234 (290)
                      +.+
T Consensus       276 h~~  278 (302)
T 2j7t_A          276 HPF  278 (302)
T ss_dssp             STT
T ss_pred             ChH
Confidence            643


No 182
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=7.1e-41  Score=288.71  Aligned_cols=231  Identities=18%  Similarity=0.147  Sum_probs=181.6

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEE-EeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCC-LETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      |+.||+|++.....  .+.+.+|+++++.++|++++..++.+ ...+..++||||+ +++|.+++.....   .+++..+
T Consensus        34 ~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~---~~~~~~~  107 (296)
T 4hgt_A           34 GEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSR---KFSLKTV  107 (296)
T ss_dssp             TEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTS---CCCHHHH
T ss_pred             CceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhcC---CCCHHHH
Confidence            57899998754322  23578999999999887766666555 6677889999999 9999999985433   5899999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEe---ccCCcEEEeccccccccccCCc------eeeccceecccccCc
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILL---VDKYQAKISDFRTFKSRAIDRT------HLTTQVKVTFGYVDP  151 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~---~~~~~~kl~dfg~~~~~~~~~~------~~~~~~~g~~~y~aP  151 (290)
                      +.++.||+.||.|||+++   |+||||||+|||+   +.++.+||+|||+++.......      .......||+.|+||
T Consensus       108 ~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  184 (296)
T 4hgt_A          108 LLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI  184 (296)
T ss_dssp             HHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCH
T ss_pred             HHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccch
Confidence            999999999999999999   9999999999999   7889999999999875443222      112346789999999


Q ss_pred             cccccCCCCCcccchhhHHHHHHHhcCCCCcccchhh--hhhhHH----Hhhhhh---hHHHHHHHHHHHHHhhccCCCC
Q 044846          152 KYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEE--NRSLAA----YFSKEA---EKEEVITFAMVAKRCLNLNGKK  222 (290)
Q Consensus       152 E~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~--~~~~~~----~~~~~~---~~~~~~~~~~li~~cl~~dp~~  222 (290)
                      |++.+..++.++|||||||++|+|++|..||......  ......    ......   ....+..+.+++.+||+.||++
T Consensus       185 E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~  264 (296)
T 4hgt_A          185 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDD  264 (296)
T ss_dssp             HHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTC
T ss_pred             HHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCC
Confidence            9999999999999999999999999999988643211  111111    111111   1223568999999999999999


Q ss_pred             CCCHHHHHHHHHhhHhhhC
Q 044846          223 QPTMKEVTLELAGIRASIG  241 (290)
Q Consensus       223 Rps~~el~~~l~~~~~~~~  241 (290)
                      |||+.++++.|+.+....+
T Consensus       265 Rpt~~~l~~~l~~~~~~~~  283 (296)
T 4hgt_A          265 KPDYSYLRQLFRNLFHRQG  283 (296)
T ss_dssp             CCCHHHHHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHHHHhC
Confidence            9999999999999887654


No 183
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=6.7e-41  Score=294.85  Aligned_cols=228  Identities=20%  Similarity=0.256  Sum_probs=180.6

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHh--cCCCceeeEEeEEEeCC----cceEEEEeCCCCCHHHHHhhcCCCCCCC
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQ--INHRNVVKILGCCLETE----VPLLVYEFIPNGSLYQYIHEQTDDQLPI   75 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~--l~Hpniv~~~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~   75 (290)
                      |+.||+|++..   ...+.+.+|++++..  ++||||+++++++....    ..++||||+++|+|.+++...     .+
T Consensus        65 ~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~  136 (342)
T 1b6c_B           65 GEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-----TV  136 (342)
T ss_dssp             TEEEEEEEECG---GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHC-----CB
T ss_pred             CccEEEEEeCc---hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhcc-----Cc
Confidence            67899999864   345678889999988  69999999999998876    789999999999999999764     48


Q ss_pred             CHHHHHHHHHHHHHHHHHHh--------hCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCce---eecccee
Q 044846           76 TWEMRLRITVEVSRVLSYLH--------SVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH---LTTQVKV  144 (290)
Q Consensus        76 ~~~~~~~~~~~i~~~l~ylH--------~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~g  144 (290)
                      ++..++.++.|++.||.|||        +.+   |+||||||+||+++.++.+||+|||++.........   ......|
T Consensus       137 ~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~g  213 (342)
T 1b6c_B          137 TVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG  213 (342)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCC
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCc
Confidence            89999999999999999999        777   999999999999999999999999998654433222   1234578


Q ss_pred             cccccCccccccCC------CCCcccchhhHHHHHHHhcC----------CCCcccchhh---hhhhHHHh-----hhh-
Q 044846          145 TFGYVDPKYFRSSQ------FTEKSDVYSFSVVLVELNWT----------KPIHLVDVEE---NRSLAAYF-----SKE-  199 (290)
Q Consensus       145 ~~~y~aPE~~~~~~------~~~~~DiwS~G~il~~l~~~----------~~~~~~~~~~---~~~~~~~~-----~~~-  199 (290)
                      |+.|+|||++.+..      ++.++||||||+++|+|++|          ..|+......   ...+....     ... 
T Consensus       214 t~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (342)
T 1b6c_B          214 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNI  293 (342)
T ss_dssp             CGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCC
T ss_pred             CcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCC
Confidence            99999999987653      33689999999999999998          4444332110   11111111     010 


Q ss_pred             ----hhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhHhhh
Q 044846          200 ----AEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASI  240 (290)
Q Consensus       200 ----~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~~~  240 (290)
                          ........+.+|+.+||+.||++|||+.+++++|+.+....
T Consensus       294 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~  338 (342)
T 1b6c_B          294 PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE  338 (342)
T ss_dssp             CGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             cccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence                12355678999999999999999999999999999987643


No 184
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=9.8e-42  Score=292.06  Aligned_cols=226  Identities=23%  Similarity=0.358  Sum_probs=177.6

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-CcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLET-EVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      |+.||+|+++..  ...+.+.+|+++++.++||||+++++++... +..++||||+++|+|.+++......  .+++..+
T Consensus        44 ~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~  119 (278)
T 1byg_A           44 GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS--VLGGDCL  119 (278)
T ss_dssp             TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHH--HCCHHHH
T ss_pred             CCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccc--cCCHHHH
Confidence            578999998753  3567899999999999999999999997654 5789999999999999999865321  3788999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCCC
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFT  160 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~  160 (290)
                      ..++.|++.||.|||+++   ++||||||+||+++.++.+||+|||++......    .....++..|+|||++.+..++
T Consensus       120 ~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~  192 (278)
T 1byg_A          120 LKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----QDTGKLPVKWTAPEALREKKFS  192 (278)
T ss_dssp             HHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC----------------CCTTTSCHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeecccccccccc----ccCCCccccccCHHHhCCCCCC
Confidence            999999999999999999   999999999999999999999999987643321    1234567889999999999999


Q ss_pred             CcccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHh---hhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 044846          161 EKSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYF---SKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGI  236 (290)
Q Consensus       161 ~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~  236 (290)
                      .++||||||+++|+|++ |..|+...... .......   ....+...+..+.++|.+||+.||.+|||+.++++.|+.+
T Consensus       193 ~~~Di~slG~il~~l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i  271 (278)
T 1byg_A          193 TKSDVWSFGILLWEIYSFGRVPYPRIPLK-DVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI  271 (278)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCSCTTSCGG-GHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             chhcHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHH
Confidence            99999999999999997 88777543221 1111111   1122234567799999999999999999999999999988


Q ss_pred             Hhh
Q 044846          237 RAS  239 (290)
Q Consensus       237 ~~~  239 (290)
                      ...
T Consensus       272 ~~~  274 (278)
T 1byg_A          272 KTH  274 (278)
T ss_dssp             HHH
T ss_pred             Hhh
Confidence            653


No 185
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=1.3e-42  Score=310.41  Aligned_cols=220  Identities=14%  Similarity=0.156  Sum_probs=170.2

Q ss_pred             CceEEEEeecc---cCchhHHHHHHHHH---HHHhcCCCceeeEE-------eEEEeCC-----------------cceE
Q 044846            2 EELWLLKKSKS---VHESNVEQFINEVV---ILSQINHRNVVKIL-------GCCLETE-----------------VPLL   51 (290)
Q Consensus         2 ~~~~avK~~~~---~~~~~~~~~~~E~~---~l~~l~Hpniv~~~-------~~~~~~~-----------------~~~l   51 (290)
                      |+.||||+++.   ......+.+.+|+.   .++.++|||||+++       +++...+                 ..|+
T Consensus        98 ~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l  177 (377)
T 3byv_A           98 GESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFF  177 (377)
T ss_dssp             CCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEE
T ss_pred             CcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEE
Confidence            67899999873   34556788999995   55555899999998       6665543                 2789


Q ss_pred             EEEeCCCCCHHHHHhhcCCC---CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccc
Q 044846           52 VYEFIPNGSLYQYIHEQTDD---QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTF  128 (290)
Q Consensus        52 v~e~~~~g~L~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~  128 (290)
                      ||||+ +|+|.+++.....-   ...+++..++.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++
T Consensus       178 v~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DFG~a  253 (377)
T 3byv_A          178 LYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRGGVFLTGFEHL  253 (377)
T ss_dssp             EEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCGGGC
T ss_pred             EEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEechhh
Confidence            99999 68999999865310   112345788889999999999999999   999999999999999999999999998


Q ss_pred             cccccCCceeeccceecccccCccccccC-----------CCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh
Q 044846          129 KSRAIDRTHLTTQVKVTFGYVDPKYFRSS-----------QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS  197 (290)
Q Consensus       129 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----------~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~  197 (290)
                      +...    .......| +.|+|||++.+.           .++.++|||||||++|+|++|..||........ ......
T Consensus       254 ~~~~----~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~-~~~~~~  327 (377)
T 3byv_A          254 VRDG----ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGG-SEWIFR  327 (377)
T ss_dssp             EETT----CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CC-SGGGGS
T ss_pred             eecC----CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccc-hhhhhh
Confidence            7432    22344566 899999999887           799999999999999999999998864332211 111111


Q ss_pred             hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q 044846          198 KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLEL  233 (290)
Q Consensus       198 ~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l  233 (290)
                        .....+..+.+||.+||+.||++|||+.|++++.
T Consensus       328 --~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp  361 (377)
T 3byv_A          328 --SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETP  361 (377)
T ss_dssp             --SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSH
T ss_pred             --hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhCh
Confidence              1123456789999999999999999999999764


No 186
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=8.9e-41  Score=297.36  Aligned_cols=223  Identities=20%  Similarity=0.284  Sum_probs=181.5

Q ss_pred             CceEEEEeecccCc--------hhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCC
Q 044846            2 EELWLLKKSKSVHE--------SNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQ   72 (290)
Q Consensus         2 ~~~~avK~~~~~~~--------~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~   72 (290)
                      |+.||||+++....        ...+.+.+|+.+++.+ +||||+++++++......++||||+++|+|.+++....   
T Consensus       119 g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~---  195 (365)
T 2y7j_A          119 GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV---  195 (365)
T ss_dssp             CCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHS---
T ss_pred             CcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcC---
Confidence            67899999864331        2255788999999999 89999999999999999999999999999999998764   


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCcc
Q 044846           73 LPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPK  152 (290)
Q Consensus        73 ~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE  152 (290)
                       .+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.+||+|||++......  .......||+.|+|||
T Consensus       196 -~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~--~~~~~~~gt~~y~aPE  269 (365)
T 2y7j_A          196 -ALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG--EKLRELCGTPGYLAPE  269 (365)
T ss_dssp             -SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECCTT--CCBCCCCSCGGGCCHH
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEEecCcccccCCC--cccccCCCCCCccChh
Confidence             5899999999999999999999999   999999999999999999999999987654322  2234467899999999


Q ss_pred             cccc------CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh------hhhHHHHHHHHHHHHHhhccCC
Q 044846          153 YFRS------SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK------EAEKEEVITFAMVAKRCLNLNG  220 (290)
Q Consensus       153 ~~~~------~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~li~~cl~~dp  220 (290)
                      ++.+      ..++.++|||||||++|+|++|..||........ .......      +.....+..+.+||.+||+.||
T Consensus       270 ~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  348 (365)
T 2y7j_A          270 ILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILM-LRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDP  348 (365)
T ss_dssp             HHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSST
T ss_pred             hccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCCh
Confidence            9863      3578899999999999999999998865432211 1111111      1112335679999999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 044846          221 KKQPTMKEVTLELA  234 (290)
Q Consensus       221 ~~Rps~~el~~~l~  234 (290)
                      ++|||+.|++++.+
T Consensus       349 ~~Rps~~ell~hp~  362 (365)
T 2y7j_A          349 EARLTAEQALQHPF  362 (365)
T ss_dssp             TTSCCHHHHHHSGG
T ss_pred             hHCcCHHHHhcCcc
Confidence            99999999998643


No 187
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=4.8e-41  Score=297.25  Aligned_cols=227  Identities=19%  Similarity=0.198  Sum_probs=177.9

Q ss_pred             CceEEEEeecccC--chhHHHHHHHHHHHHhcCCCceeeEEeEEEe--------CCcceEEEEeCCCCCHHHHHhhcCCC
Q 044846            2 EELWLLKKSKSVH--ESNVEQFINEVVILSQINHRNVVKILGCCLE--------TEVPLLVYEFIPNGSLYQYIHEQTDD   71 (290)
Q Consensus         2 ~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~~~   71 (290)
                      |+.||+|++....  ......+.+|+++++.++||||+++++++..        .+..++||||+. |+|.+.+..... 
T Consensus        42 ~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~-  119 (351)
T 3mi9_A           42 GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVLV-  119 (351)
T ss_dssp             CCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEECCS-EEHHHHHHCTTS-
T ss_pred             CCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEEEeccC-CCHHHHHhhccC-
Confidence            6789999885432  3335578899999999999999999999987        346899999996 588888876543 


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccC---Cceeeccceecccc
Q 044846           72 QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAID---RTHLTTQVKVTFGY  148 (290)
Q Consensus        72 ~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~g~~~y  148 (290)
                        .+++..++.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++.....   .........||+.|
T Consensus       120 --~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y  194 (351)
T 3mi9_A          120 --KFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWY  194 (351)
T ss_dssp             --CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGG
T ss_pred             --CCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCc
Confidence              5899999999999999999999999   999999999999999999999999998654321   12223446689999


Q ss_pred             cCcccccc-CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHH--Hhh---h------------------------
Q 044846          149 VDPKYFRS-SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAA--YFS---K------------------------  198 (290)
Q Consensus       149 ~aPE~~~~-~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~--~~~---~------------------------  198 (290)
                      +|||++.+ ..++.++|||||||++|+|++|.++|............  ...   .                        
T Consensus       195 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (351)
T 3mi9_A          195 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRK  274 (351)
T ss_dssp             CCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCC
T ss_pred             cCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccC
Confidence            99999876 45899999999999999999999988654322111100  000   0                        


Q ss_pred             ----hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 044846          199 ----EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAG  235 (290)
Q Consensus       199 ----~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~  235 (290)
                          ......+..+.+||.+||+.||++|||++|++++.+-
T Consensus       275 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f  315 (351)
T 3mi9_A          275 VKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF  315 (351)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             HHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCc
Confidence                0000124568899999999999999999999988654


No 188
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=4.4e-41  Score=295.26  Aligned_cols=226  Identities=19%  Similarity=0.274  Sum_probs=178.2

Q ss_pred             CceEEEEeecccC--chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKSVH--ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.||+|++....  ....+.+.+|+++++.++||||+++++++...+..++||||+.+++|..++....    .+++..
T Consensus        50 ~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----~~~~~~  125 (331)
T 4aaa_A           50 GRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPN----GLDYQV  125 (331)
T ss_dssp             CCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHSTT----CCCHHH
T ss_pred             CceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcchHHHHHhhcc----CCCHHH
Confidence            6789999985433  3345678899999999999999999999999999999999999988888766543    589999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccC-C
Q 044846           80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSS-Q  158 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~  158 (290)
                      +..++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++....... .......|+..|+|||++.+. .
T Consensus       126 ~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~  201 (331)
T 4aaa_A          126 VQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-EVYDDEVATRWYRAPELLVGDVK  201 (331)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC-------------CCCCCTTCCHHHHTTCTT
T ss_pred             HHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCc-cccCCCcCCccccCcccccCCCC
Confidence            9999999999999999999   9999999999999999999999999986433211 222345688999999999875 6


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh--------------------------------hhhhHHHHH
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS--------------------------------KEAEKEEVI  206 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~  206 (290)
                      ++.++|||||||++|+|++|.+||...............                                .......+.
T Consensus       202 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (331)
T 4aaa_A          202 YGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSE  281 (331)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCH
T ss_pred             cchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhH
Confidence            889999999999999999999988654332211111000                                000112356


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 044846          207 TFAMVAKRCLNLNGKKQPTMKEVTLELAG  235 (290)
Q Consensus       207 ~~~~li~~cl~~dp~~Rps~~el~~~l~~  235 (290)
                      .+.+||.+||+.||.+|||+.|++++.+-
T Consensus       282 ~l~~li~~~L~~dP~~Rpt~~ell~hp~f  310 (331)
T 4aaa_A          282 VVIDLAKKCLHIDPDKRPFCAELLHHDFF  310 (331)
T ss_dssp             HHHHHHHHHTCSSGGGSCCGGGGGGSHHH
T ss_pred             HHHHHHHHHhccCcccCCCHHHHhcCchh
Confidence            79999999999999999999999988654


No 189
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=8.3e-41  Score=291.05  Aligned_cols=225  Identities=20%  Similarity=0.217  Sum_probs=184.7

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      |+.||+|++...  ...+.+.+|+.+++.++||||+++++++...+..++||||+++|+|.+++.....   .+++..+.
T Consensus        54 ~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~  128 (314)
T 3com_A           54 GQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNK---TLTEDEIA  128 (314)
T ss_dssp             CCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTC---CCCHHHHH
T ss_pred             CCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcCC---CCCHHHHH
Confidence            678999998753  3456789999999999999999999999999999999999999999999975432   58999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTE  161 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~  161 (290)
                      .++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||++....... .......|+..|+|||++.+..++.
T Consensus       129 ~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~  204 (314)
T 3com_A          129 TILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVIQEIGYNC  204 (314)
T ss_dssp             HHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTTB-SCBCCCCSCGGGCCHHHHSSSCBCT
T ss_pred             HHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhhc-cccCccCCCCCccChhhcCCCCCCc
Confidence            99999999999999999   9999999999999999999999999986543221 1223456889999999999999999


Q ss_pred             cccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh----hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 044846          162 KSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS----KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAG  235 (290)
Q Consensus       162 ~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~  235 (290)
                      ++||||||+++|+|++|..|+...............    ...+...+..+.+||.+||+.||.+|||+.+++++.+-
T Consensus       205 ~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~  282 (314)
T 3com_A          205 VADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFV  282 (314)
T ss_dssp             THHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHH
T ss_pred             cccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHH
Confidence            999999999999999999888643322211111000    01122345679999999999999999999999987543


No 190
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=1.1e-40  Score=287.61  Aligned_cols=231  Identities=18%  Similarity=0.154  Sum_probs=182.7

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEE-EeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCC-LETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      |+.||+|++.....  .+.+.+|+.+++.++|++++..+..+ ...+..++||||+ +++|.+++.....   .+++..+
T Consensus        34 ~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~---~~~~~~~  107 (296)
T 3uzp_A           34 GEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSR---KFSLKTV  107 (296)
T ss_dssp             TEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT---CCCHHHH
T ss_pred             CcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCHHHHHHhhcc---CCCHHHH
Confidence            67899999865332  34688999999999888766655555 5677889999999 8999999975432   5899999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEe---ccCCcEEEeccccccccccCCce------eeccceecccccCc
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILL---VDKYQAKISDFRTFKSRAIDRTH------LTTQVKVTFGYVDP  151 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~---~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~g~~~y~aP  151 (290)
                      +.++.|++.||.|||+++   |+||||||+||++   +.++.+||+|||++.........      ......||+.|+||
T Consensus       108 ~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  184 (296)
T 3uzp_A          108 LLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI  184 (296)
T ss_dssp             HHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCH
T ss_pred             HHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCCh
Confidence            999999999999999999   9999999999999   48899999999998754433221      12345789999999


Q ss_pred             cccccCCCCCcccchhhHHHHHHHhcCCCCcccchhh--hhhhHH----Hhhhh---hhHHHHHHHHHHHHHhhccCCCC
Q 044846          152 KYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEE--NRSLAA----YFSKE---AEKEEVITFAMVAKRCLNLNGKK  222 (290)
Q Consensus       152 E~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~--~~~~~~----~~~~~---~~~~~~~~~~~li~~cl~~dp~~  222 (290)
                      |++.+..++.++|||||||++|+|++|..||......  ......    .....   .....+..+.+++.+||+.||.+
T Consensus       185 E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~  264 (296)
T 3uzp_A          185 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDD  264 (296)
T ss_dssp             HHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTC
T ss_pred             hhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCc
Confidence            9999999999999999999999999999988642211  111111    11111   11234567999999999999999


Q ss_pred             CCCHHHHHHHHHhhHhhhC
Q 044846          223 QPTMKEVTLELAGIRASIG  241 (290)
Q Consensus       223 Rps~~el~~~l~~~~~~~~  241 (290)
                      |||+.++++.|+.+.....
T Consensus       265 Rps~~~l~~~l~~~~~~~~  283 (296)
T 3uzp_A          265 KPDYSYLRQLFRNLFHRQG  283 (296)
T ss_dssp             CCCHHHHHHHHHHHHHHTT
T ss_pred             CCCHHHHHHHHHHHHHhcC
Confidence            9999999999999876653


No 191
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=5.1e-41  Score=302.07  Aligned_cols=232  Identities=19%  Similarity=0.242  Sum_probs=186.3

Q ss_pred             CceEEEEeecccC-chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC--cceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSVH-ESNVEQFINEVVILSQINHRNVVKILGCCLETE--VPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|+++... ....+.+.+|+++++.++||||+++++++...+  ..++|||||++|+|.+++...... ..+++.
T Consensus        34 ~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-~~l~~~  112 (396)
T 4eut_A           34 GDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNA-YGLPES  112 (396)
T ss_dssp             CCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGT-TCCCHH
T ss_pred             CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcc-cCCCHH
Confidence            6789999997533 344677889999999999999999999998755  679999999999999999875432 238999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEe----ccCCcEEEeccccccccccCCceeeccceecccccCcccc
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL----VDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYF  154 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~----~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~  154 (290)
                      .++.++.||+.||.|||+++   |+||||||+|||+    +.++.+||+|||+++.....  .......||..|+|||++
T Consensus       113 ~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~  187 (396)
T 4eut_A          113 EFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD--EQFVSLYGTEEYLHPDMY  187 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG--GGSSCSSSCCTTCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC--CccccccCCccccCHHHh
Confidence            99999999999999999999   9999999999999    77788999999998654322  223345689999999998


Q ss_pred             cc--------CCCCCcccchhhHHHHHHHhcCCCCcccchhh---hhhhHHHhhh-------------------------
Q 044846          155 RS--------SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEE---NRSLAAYFSK-------------------------  198 (290)
Q Consensus       155 ~~--------~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~---~~~~~~~~~~-------------------------  198 (290)
                      .+        ..++.++|||||||++|+|++|..||......   ..........                         
T Consensus       188 ~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  267 (396)
T 4eut_A          188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPV  267 (396)
T ss_dssp             HHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCT
T ss_pred             hccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCc
Confidence            65        45778999999999999999999988632211   1111111111                         


Q ss_pred             --hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhHhh
Q 044846          199 --EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRAS  239 (290)
Q Consensus       199 --~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~~  239 (290)
                        .........+.+++.+||+.||++|||+.|+++.+..+...
T Consensus       268 ~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          268 SCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             TCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             ccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence              11245677899999999999999999999999999887653


No 192
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=8.3e-41  Score=289.73  Aligned_cols=228  Identities=23%  Similarity=0.286  Sum_probs=187.2

Q ss_pred             CceEEEEeecccC-chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            2 EELWLLKKSKSVH-ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         2 ~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      |+.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..++||||+++++|.+++...     .+++..+
T Consensus        47 ~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-----~~~~~~~  121 (303)
T 3a7i_A           47 QKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQI  121 (303)
T ss_dssp             CCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTTS-----CCCHHHH
T ss_pred             CcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhcC-----CCCHHHH
Confidence            6789999986433 455788999999999999999999999999999999999999999999999753     5899999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCCC
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFT  160 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~  160 (290)
                      ..++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++....... .......|+..|+|||++.+..++
T Consensus       122 ~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~  197 (303)
T 3a7i_A          122 ATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKRNTFVGTPFWMAPEVIKQSAYD  197 (303)
T ss_dssp             HHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-CCBCCCCSCGGGCCHHHHTTCCBC
T ss_pred             HHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCccc-cccCccCCCcCccCHHHHhcCCCC
Confidence            999999999999999999   9999999999999999999999999976543221 122345688999999999999999


Q ss_pred             CcccchhhHHHHHHHhcCCCCcccchhhhhhhHH--HhhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhHh
Q 044846          161 EKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAA--YFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRA  238 (290)
Q Consensus       161 ~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~  238 (290)
                      .++||||||+++|+|++|.+|+............  ..........+..+.+|+.+||+.||.+|||+.+++++.+....
T Consensus       198 ~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~  277 (303)
T 3a7i_A          198 SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN  277 (303)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred             chhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcC
Confidence            9999999999999999999887543322111110  00111122345678999999999999999999999998765544


No 193
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=1.1e-40  Score=308.71  Aligned_cols=224  Identities=23%  Similarity=0.214  Sum_probs=183.3

Q ss_pred             CceEEEEeecccCc-------------hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhc
Q 044846            2 EELWLLKKSKSVHE-------------SNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQ   68 (290)
Q Consensus         2 ~~~~avK~~~~~~~-------------~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~   68 (290)
                      |+.||+|+++....             ...+.+.+|+.+++.++||||+++++++......++|||||++|+|.+++...
T Consensus        61 ~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~  140 (504)
T 3q5i_A           61 HSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR  140 (504)
T ss_dssp             CCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHH
T ss_pred             CcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHc
Confidence            57899999864321             34678999999999999999999999999999999999999999999999876


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCC---cEEEeccccccccccCCceeeccceec
Q 044846           69 TDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY---QAKISDFRTFKSRAIDRTHLTTQVKVT  145 (290)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~g~  145 (290)
                      .    .+++..+..++.||+.||.|||+++   |+||||||+|||++.++   .+||+|||++......  .......||
T Consensus       141 ~----~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~gt  211 (504)
T 3q5i_A          141 H----KFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD--YKLRDRLGT  211 (504)
T ss_dssp             S----CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTT--SCBCCCCSC
T ss_pred             C----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCC--CccccccCC
Confidence            5    5899999999999999999999999   99999999999998776   6999999998654322  223445689


Q ss_pred             ccccCccccccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------hhhhHHHHHHHHHHHHHhhccC
Q 044846          146 FGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------KEAEKEEVITFAMVAKRCLNLN  219 (290)
Q Consensus       146 ~~y~aPE~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~d  219 (290)
                      +.|+|||++. ..++.++||||+||++|+|++|.+||........ ......      .......+..+.+||.+||+.|
T Consensus       212 ~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~d  289 (504)
T 3q5i_A          212 AYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDI-IKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYD  289 (504)
T ss_dssp             TTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSS
T ss_pred             cCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCC
Confidence            9999999987 4689999999999999999999998865433221 111111      1112234678999999999999


Q ss_pred             CCCCCCHHHHHHHHHhh
Q 044846          220 GKKQPTMKEVTLELAGI  236 (290)
Q Consensus       220 p~~Rps~~el~~~l~~~  236 (290)
                      |.+|||+.|++++.+-.
T Consensus       290 p~~R~t~~e~l~h~~~~  306 (504)
T 3q5i_A          290 YNKRCTAEEALNSRWIK  306 (504)
T ss_dssp             TTTSCCHHHHHTSHHHH
T ss_pred             hhHCCCHHHHhcCHhhh
Confidence            99999999999886543


No 194
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=9.2e-41  Score=297.88  Aligned_cols=221  Identities=19%  Similarity=0.234  Sum_probs=171.8

Q ss_pred             CceEEEEeecc--cCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC------cceEEEEeCCCCCHHHHHhhcCCCCC
Q 044846            2 EELWLLKKSKS--VHESNVEQFINEVVILSQINHRNVVKILGCCLETE------VPLLVYEFIPNGSLYQYIHEQTDDQL   73 (290)
Q Consensus         2 ~~~~avK~~~~--~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~------~~~lv~e~~~~g~L~~~l~~~~~~~~   73 (290)
                      |+.||||++..  ......+.+.+|+.+++.++||||+++++++...+      ..++||||+. |+|.+++..      
T Consensus        50 ~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~------  122 (371)
T 2xrw_A           50 ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQM------  122 (371)
T ss_dssp             TEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCS-EEHHHHHHS------
T ss_pred             CceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEEcCC-CCHHHHHhh------
Confidence            67899999864  23445678899999999999999999999998765      6799999995 589888862      


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccc
Q 044846           74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKY  153 (290)
Q Consensus        74 ~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~  153 (290)
                      .+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++....  ........||+.|+|||+
T Consensus       123 ~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~gt~~y~aPE~  197 (371)
T 2xrw_A          123 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV  197 (371)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC------------------CTTCCHHH
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeeccccccc--ccccCCceecCCccCHHH
Confidence            4788999999999999999999999   99999999999999999999999999864332  222344678999999999


Q ss_pred             cccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------------------------------------
Q 044846          154 FRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------------------------------------  197 (290)
Q Consensus       154 ~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------------------------------------  197 (290)
                      +.+..++.++|||||||++|+|++|..||........ +.....                                    
T Consensus       198 ~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (371)
T 2xrw_A          198 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLF  276 (371)
T ss_dssp             HTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHS
T ss_pred             hcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhc
Confidence            9999999999999999999999999998864432111 000000                                    


Q ss_pred             --------hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 044846          198 --------KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAG  235 (290)
Q Consensus       198 --------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~  235 (290)
                              .......+..+.+||.+||+.||.+|||++|++++.+-
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~  322 (371)
T 2xrw_A          277 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI  322 (371)
T ss_dssp             CGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHH
T ss_pred             ccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcch
Confidence                    00112336679999999999999999999999998654


No 195
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=1.4e-41  Score=306.43  Aligned_cols=230  Identities=19%  Similarity=0.271  Sum_probs=170.5

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEe--CCcceEEEEeCCCCCHHHHHhhcC-----CCCCC
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLE--TEVPLLVYEFIPNGSLYQYIHEQT-----DDQLP   74 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~-----~~~~~   74 (290)
                      ++.||+|+++...  ....+.+|+++|+.|+||||+++++++..  ....++||||+. |+|.+++....     .....
T Consensus        48 ~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~  124 (405)
T 3rgf_A           48 DKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQ  124 (405)
T ss_dssp             CCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS-EEHHHHHHHHHHHC-------
T ss_pred             CeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC-CCHHHHHHHhccccccccccC
Confidence            5679999997533  23467899999999999999999999965  668899999995 68998886432     11224


Q ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEe----ccCCcEEEeccccccccccCCc--eeeccceecccc
Q 044846           75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL----VDKYQAKISDFRTFKSRAIDRT--HLTTQVKVTFGY  148 (290)
Q Consensus        75 ~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~----~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~g~~~y  148 (290)
                      +++..++.++.||+.||.|||+++   |+||||||+|||+    +.++.+||+|||+++.......  .......||+.|
T Consensus       125 l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y  201 (405)
T 3rgf_A          125 LPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWY  201 (405)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcc
Confidence            889999999999999999999999   9999999999999    6778999999999875432211  223446789999


Q ss_pred             cCccccccC-CCCCcccchhhHHHHHHHhcCCCCcccchhhh--------hhhHHHhh----------------------
Q 044846          149 VDPKYFRSS-QFTEKSDVYSFSVVLVELNWTKPIHLVDVEEN--------RSLAAYFS----------------------  197 (290)
Q Consensus       149 ~aPE~~~~~-~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~--------~~~~~~~~----------------------  197 (290)
                      +|||++.+. .++.++|||||||++|+|++|.+||.......        ..+.....                      
T Consensus       202 ~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~  281 (405)
T 3rgf_A          202 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTL  281 (405)
T ss_dssp             CCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHH
T ss_pred             cCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhh
Confidence            999999874 48999999999999999999999885332110        00000000                      


Q ss_pred             -----hh-h----h--------HHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhH
Q 044846          198 -----KE-A----E--------KEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIR  237 (290)
Q Consensus       198 -----~~-~----~--------~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~  237 (290)
                           .. .    .        ...+..+.+||.+||+.||.+|||++|+++|.+...
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~  339 (405)
T 3rgf_A          282 MKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLE  339 (405)
T ss_dssp             HHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTS
T ss_pred             hhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhcc
Confidence                 00 0    0        001456889999999999999999999999977654


No 196
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=1.5e-40  Score=291.39  Aligned_cols=218  Identities=17%  Similarity=0.201  Sum_probs=176.7

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcC-CCceeeEEeEEEe--CCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQIN-HRNVVKILGCCLE--TEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~-Hpniv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|+++..   ..+.+.+|+++++.++ ||||+++++++..  ....++||||+.+++|.+++.       .+++.
T Consensus        61 ~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-------~~~~~  130 (330)
T 3nsz_A           61 NEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ-------TLTDY  130 (330)
T ss_dssp             CCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGG-------GCCHH
T ss_pred             CcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHH-------hCCHH
Confidence            678999998743   3467889999999996 9999999999988  667899999999999999985       37888


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCC-cEEEeccccccccccCCceeeccceecccccCcccccc-
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY-QAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRS-  156 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-  156 (290)
                      .+..++.||+.||.|||+++   |+||||||+|||++.++ .+||+|||+++.....  .......++..|+|||++.+ 
T Consensus       131 ~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~~~y~aPE~~~~~  205 (330)
T 3nsz_A          131 DIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG--QEYNVRVASRYFKGPELLVDY  205 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCTT--CCCCSCCSCGGGCCHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC--CccccccccccccChhhhcCC
Confidence            99999999999999999999   99999999999999777 8999999998654322  22334568889999999887 


Q ss_pred             CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh--------------------------------------
Q 044846          157 SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK--------------------------------------  198 (290)
Q Consensus       157 ~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------  198 (290)
                      ..++.++|||||||++|+|++|..|+.........+......                                      
T Consensus       206 ~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (330)
T 3nsz_A          206 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH  285 (330)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCC
T ss_pred             CcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhcc
Confidence            668999999999999999999998885443222211111100                                      


Q ss_pred             -hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          199 -EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       199 -~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                       ......+..+.+||.+||+.||.+|||++|+++|.+
T Consensus       286 ~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~  322 (330)
T 3nsz_A          286 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY  322 (330)
T ss_dssp             TTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGG
T ss_pred             ccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCcc
Confidence             001113577899999999999999999999998754


No 197
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3e-41  Score=298.20  Aligned_cols=226  Identities=21%  Similarity=0.204  Sum_probs=178.0

Q ss_pred             CceEEEEeecccCch-----hHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCC
Q 044846            2 EELWLLKKSKSVHES-----NVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPIT   76 (290)
Q Consensus         2 ~~~~avK~~~~~~~~-----~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~   76 (290)
                      |+.||+|+++.....     ..+.+.+|+++++.++||||+++++++...+..++||||+.+ +|..++.....   .++
T Consensus        35 ~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~---~~~  110 (346)
T 1ua2_A           35 NQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSL---VLT  110 (346)
T ss_dssp             CSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSE-EHHHHHTTCCS---SCC
T ss_pred             CcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCCC-CHHHHHHhcCc---CCC
Confidence            678999998743222     134688999999999999999999999999999999999965 89999876432   578


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCcccccc
Q 044846           77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRS  156 (290)
Q Consensus        77 ~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~  156 (290)
                      +..+..++.|++.||.|||+++   |+||||||+|||++.++.+||+|||+++..... ........||+.|+|||++.+
T Consensus       111 ~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~~t~~y~aPE~~~~  186 (346)
T 1ua2_A          111 PSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP-NRAYTHQVVTRWYRAPELLFG  186 (346)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC-CCCCCCSCCCCTTCCHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccceeccCC-cccCCcccccccccCchHhhC
Confidence            8899999999999999999999   999999999999999999999999998654322 222344668999999999876


Q ss_pred             C-CCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh------------------------------hhhHHHH
Q 044846          157 S-QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK------------------------------EAEKEEV  205 (290)
Q Consensus       157 ~-~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~  205 (290)
                      . .++.++|||||||++|+|++|.+++........ +......                              ......+
T Consensus       187 ~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (346)
T 1ua2_A          187 ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ-LTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAG  265 (346)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCC
T ss_pred             CCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCC
Confidence            4 488899999999999999999988765433221 1111100                              0002234


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 044846          206 ITFAMVAKRCLNLNGKKQPTMKEVTLELAGI  236 (290)
Q Consensus       206 ~~~~~li~~cl~~dp~~Rps~~el~~~l~~~  236 (290)
                      ..+.+||.+||+.||.+|||+.|++++.+-.
T Consensus       266 ~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~  296 (346)
T 1ua2_A          266 DDLLDLIQGLFLFNPCARITATQALKMKYFS  296 (346)
T ss_dssp             HHHHHHHHHHHCSSTTTSCCHHHHHTSGGGT
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHhcChhhh
Confidence            6799999999999999999999999886543


No 198
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=4.9e-41  Score=289.15  Aligned_cols=227  Identities=22%  Similarity=0.314  Sum_probs=179.5

Q ss_pred             eEEEEeeccc---CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            4 LWLLKKSKSV---HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         4 ~~avK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      .||+|+++..   .....+.+.+|+++++.++||||+++++++.... .++||||+++|+|.+++.....   .+++..+
T Consensus        48 ~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~~~---~~~~~~~  123 (291)
T 1u46_A           48 SVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQG---HFLLGTL  123 (291)
T ss_dssp             EEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEECCTTCBHHHHHHHHGG---GSCHHHH
T ss_pred             EEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEecccCCCHHHHHHhccC---CcCHHHH
Confidence            5899988643   3456778999999999999999999999998765 8999999999999999987532   5889999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCcee--eccceecccccCccccccCC
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL--TTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~  158 (290)
                      ..++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++..........  .....++..|+|||++.+..
T Consensus       124 ~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  200 (291)
T 1u46_A          124 SRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT  200 (291)
T ss_dssp             HHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCE
T ss_pred             HHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCC
Confidence            999999999999999999   9999999999999999999999999987544332221  23345677899999999888


Q ss_pred             CCCcccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHhh----hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q 044846          159 FTEKSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYFS----KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLEL  233 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l  233 (290)
                      ++.++||||||+++|+|++ |..|+...... ........    .......+..+.+++.+||+.||.+|||+.++++.|
T Consensus       201 ~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l  279 (291)
T 1u46_A          201 FSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL  279 (291)
T ss_dssp             EEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCcccCCHH-HHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHH
Confidence            9999999999999999998 88877543322 11111111    112234567799999999999999999999999999


Q ss_pred             HhhHh
Q 044846          234 AGIRA  238 (290)
Q Consensus       234 ~~~~~  238 (290)
                      +.+..
T Consensus       280 ~~~~~  284 (291)
T 1u46_A          280 LEAQP  284 (291)
T ss_dssp             HHHC-
T ss_pred             HHhCc
Confidence            87653


No 199
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=1e-41  Score=291.91  Aligned_cols=235  Identities=20%  Similarity=0.283  Sum_probs=183.8

Q ss_pred             CceEEEEeeccc--CchhHHHHHHHHHHHHhcCCCceeeEEeEEEe--CCcceEEEEeCCCCCHHHHHhhcCCCCCCCCH
Q 044846            2 EELWLLKKSKSV--HESNVEQFINEVVILSQINHRNVVKILGCCLE--TEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW   77 (290)
Q Consensus         2 ~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~   77 (290)
                      |+.||+|++...  .....+.+.+|+++++.++||||+++++++..  ....++||||+++|+|.+++.........+++
T Consensus        31 ~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~  110 (279)
T 2w5a_A           31 GKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDE  110 (279)
T ss_dssp             CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCH
T ss_pred             CcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCH
Confidence            678999998643  34557789999999999999999999998854  56789999999999999999875443345899


Q ss_pred             HHHHHHHHHHHHHHHHHhhCC--CCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccc
Q 044846           78 EMRLRITVEVSRVLSYLHSVA--SIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFR  155 (290)
Q Consensus        78 ~~~~~~~~~i~~~l~ylH~~~--~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~  155 (290)
                      ..++.++.|++.||.|||+.+  ..+|+||||||+||+++.++.+||+|||++....... .......|+..|+|||++.
T Consensus       111 ~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~  189 (279)
T 2w5a_A          111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT-SFAKTFVGTPYYMSPEQMN  189 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---C-HHHHHHHSCCTTCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecccc-ccccccCCCccccChHHhc
Confidence            999999999999999999876  2349999999999999999999999999976533211 1123456789999999999


Q ss_pred             cCCCCCcccchhhHHHHHHHhcCCCCcccchhhhh--hhHHHhhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q 044846          156 SSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENR--SLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLEL  233 (290)
Q Consensus       156 ~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l  233 (290)
                      +..++.++||||||+++|+|++|..|+........  .+........+...+..+.++|.+||+.||.+|||+.|+++++
T Consensus       190 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~  269 (279)
T 2w5a_A          190 RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP  269 (279)
T ss_dssp             CC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred             cCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence            98999999999999999999999988764432211  1111111112234567799999999999999999999999887


Q ss_pred             HhhH
Q 044846          234 AGIR  237 (290)
Q Consensus       234 ~~~~  237 (290)
                      +...
T Consensus       270 ~~~~  273 (279)
T 2w5a_A          270 LILE  273 (279)
T ss_dssp             TCCG
T ss_pred             hhhh
Confidence            6543


No 200
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=8.5e-41  Score=317.90  Aligned_cols=229  Identities=19%  Similarity=0.276  Sum_probs=182.3

Q ss_pred             ceEEEEeeccc-CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            3 ELWLLKKSKSV-HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         3 ~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      ..||+|+.+.. .....+.+.+|+.+++.++||||+++++++. .+..++||||+++|+|.+++.....   .+++..++
T Consensus       419 ~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~---~l~~~~~~  494 (656)
T 2j0j_A          419 MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKF---SLDLASLI  494 (656)
T ss_dssp             EEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHHHHTTT---TCCHHHHH
T ss_pred             EEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcCCCCcHHHHHHhccC---CCCHHHHH
Confidence            46899988753 3445678999999999999999999999985 4678999999999999999986542   58899999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCCCCC
Q 044846           82 RITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTE  161 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~  161 (290)
                      .++.|++.||.|||+++   |+||||||+|||++.++.+||+|||+++..............+++.|+|||++.+..++.
T Consensus       495 ~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  571 (656)
T 2j0j_A          495 LYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS  571 (656)
T ss_dssp             HHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCH
T ss_pred             HHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCc
Confidence            99999999999999999   999999999999999999999999998754433222233455678899999999899999


Q ss_pred             cccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHh---hhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhH
Q 044846          162 KSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYF---SKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIR  237 (290)
Q Consensus       162 ~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~  237 (290)
                      ++|||||||++|||++ |.+||....... ......   ....+...+..+.+||.+||+.||.+|||+.++++.|+.+.
T Consensus       572 ~~DiwSlG~il~ellt~g~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il  650 (656)
T 2j0j_A          572 ASDVWMFGVCMWEILMHGVKPFQGVKNND-VIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  650 (656)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            9999999999999986 777775432221 111111   11223345678999999999999999999999999999886


Q ss_pred             hh
Q 044846          238 AS  239 (290)
Q Consensus       238 ~~  239 (290)
                      ..
T Consensus       651 ~~  652 (656)
T 2j0j_A          651 EE  652 (656)
T ss_dssp             HH
T ss_pred             HH
Confidence            43


No 201
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=8e-43  Score=301.88  Aligned_cols=227  Identities=20%  Similarity=0.264  Sum_probs=164.5

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHh--cCCCceeeEEeEEEeCC----cceEEEEeCCCCCHHHHHhhcCCCCCCC
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQ--INHRNVVKILGCCLETE----VPLLVYEFIPNGSLYQYIHEQTDDQLPI   75 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~--l~Hpniv~~~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~   75 (290)
                      |+.||||+++.   .....+.+|.+++..  ++||||+++++++...+    ..++||||+++|+|.+++...     .+
T Consensus        26 ~~~vavK~~~~---~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~   97 (303)
T 3gxj_A           26 GEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-----TV   97 (303)
T ss_dssp             TSCEEEEECC----TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCTTCCHHHHHHHC-----CB
T ss_pred             CcceEEEEecc---cchhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEeccCCCCHHHHHhcc-----Cc
Confidence            67899999864   334567789999888  79999999999998876    789999999999999999754     37


Q ss_pred             CHHHHHHHHHHHHHHHHHHh--------hCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCcee---ecccee
Q 044846           76 TWEMRLRITVEVSRVLSYLH--------SVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL---TTQVKV  144 (290)
Q Consensus        76 ~~~~~~~~~~~i~~~l~ylH--------~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~g  144 (290)
                      ++..++.++.|++.||.|||        +.+   |+||||||+|||++.++.+||+|||++..........   .....|
T Consensus        98 ~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~g  174 (303)
T 3gxj_A           98 TVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG  174 (303)
T ss_dssp             CC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEETTTTEESCC-----C
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEEeecCcceeccCCCcccccccCCCCc
Confidence            77888999999999999999        777   9999999999999999999999999986543322221   233468


Q ss_pred             cccccCccccccC------CCCCcccchhhHHHHHHHhcC----------CCCcccchhh---hhhhHHHh-----hh--
Q 044846          145 TFGYVDPKYFRSS------QFTEKSDVYSFSVVLVELNWT----------KPIHLVDVEE---NRSLAAYF-----SK--  198 (290)
Q Consensus       145 ~~~y~aPE~~~~~------~~~~~~DiwS~G~il~~l~~~----------~~~~~~~~~~---~~~~~~~~-----~~--  198 (290)
                      |+.|+|||++.+.      .++.++|||||||++|+|++|          ..|+......   ........     ..  
T Consensus       175 t~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (303)
T 3gxj_A          175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNI  254 (303)
T ss_dssp             CGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTTSCCCCCC
T ss_pred             CccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCccHHHHHHHHHHhhcCCCc
Confidence            9999999998876      334689999999999999998          3343221110   00000100     01  


Q ss_pred             ---hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhHhh
Q 044846          199 ---EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRAS  239 (290)
Q Consensus       199 ---~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~~  239 (290)
                         ......+..+.+|+.+||+.||.+|||+.++++.|+.+...
T Consensus       255 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~  298 (303)
T 3gxj_A          255 PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             CGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred             cccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence               11225566799999999999999999999999999887653


No 202
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=4.3e-41  Score=320.83  Aligned_cols=223  Identities=19%  Similarity=0.218  Sum_probs=186.4

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW   77 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~   77 (290)
                      |+.||||+++..   .....+.+..|..++..+ +||||+++++++.+.+.+||||||+++|+|..++....    .+++
T Consensus       366 ~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~----~~~~  441 (674)
T 3pfq_A          366 DELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG----RFKE  441 (674)
T ss_dssp             CCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHS----SCCH
T ss_pred             CcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcC----CCCH
Confidence            578999998742   344567788999999998 79999999999999999999999999999999998765    5899


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccC
Q 044846           78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSS  157 (290)
Q Consensus        78 ~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  157 (290)
                      ..++.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++..... ........||+.|+|||++.+.
T Consensus       442 ~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~-~~~~~~~~GT~~Y~APE~l~~~  517 (674)
T 3pfq_A          442 PHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD-GVTTKTFCGTPDYIAPEIIAYQ  517 (674)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEECCCT-TCCBCCCCSCSSSCCHHHHTCC
T ss_pred             HHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeeccccC-CcccccccCCCcccCHhhhcCC
Confidence            999999999999999999999   999999999999999999999999998753222 2234457799999999999999


Q ss_pred             CCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh--hhhhHHHHHHHHHHHHHhhccCCCCCCCH-----HHHH
Q 044846          158 QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS--KEAEKEEVITFAMVAKRCLNLNGKKQPTM-----KEVT  230 (290)
Q Consensus       158 ~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rps~-----~el~  230 (290)
                      .|+.++|||||||++|||++|.+||...... ........  ...+...+.++.+||.+||+.||.+||++     +||+
T Consensus       518 ~~~~~~DvwSlGvilyelltG~~Pf~~~~~~-~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~  596 (674)
T 3pfq_A          518 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-ELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK  596 (674)
T ss_dssp             CBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHSSCCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHH
T ss_pred             CCCccceEechHHHHHHHHcCCCCCCCCCHH-HHHHHHHhCCCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHh
Confidence            9999999999999999999999998754332 11222111  12233456789999999999999999997     7887


Q ss_pred             HHH
Q 044846          231 LEL  233 (290)
Q Consensus       231 ~~l  233 (290)
                      +|.
T Consensus       597 ~h~  599 (674)
T 3pfq_A          597 EHA  599 (674)
T ss_dssp             SSG
T ss_pred             cCc
Confidence            664


No 203
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=3.1e-41  Score=305.61  Aligned_cols=224  Identities=21%  Similarity=0.175  Sum_probs=169.9

Q ss_pred             CceEEEEeecccC--------chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCC
Q 044846            2 EELWLLKKSKSVH--------ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL   73 (290)
Q Consensus         2 ~~~~avK~~~~~~--------~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~   73 (290)
                      |+.||+|++....        ......+.+|+++|++++||||+++++++.. +..++||||+++|+|.+++....    
T Consensus       160 ~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~----  234 (419)
T 3i6u_A          160 CKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNK----  234 (419)
T ss_dssp             CCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SEEEEEEECCTTCBGGGGTSSSC----
T ss_pred             CcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-CceEEEEEcCCCCcHHHHHhccC----
Confidence            5789999986421        2223358899999999999999999999854 45799999999999999887544    


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCC---cEEEeccccccccccCCceeeccceecccccC
Q 044846           74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKY---QAKISDFRTFKSRAIDRTHLTTQVKVTFGYVD  150 (290)
Q Consensus        74 ~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~a  150 (290)
                      .+++..+..++.|++.||.|||+++   |+||||||+|||++.++   .+||+|||+++...  .........||+.|+|
T Consensus       235 ~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~--~~~~~~~~~gt~~y~a  309 (419)
T 3i6u_A          235 RLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYLA  309 (419)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-------------CTTCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEeecccceecC--CCccccccCCCCCccC
Confidence            6899999999999999999999999   99999999999997544   59999999987543  2223345678999999


Q ss_pred             cccccc---CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------hhhhHHHHHHHHHHHHHhhccCCC
Q 044846          151 PKYFRS---SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------KEAEKEEVITFAMVAKRCLNLNGK  221 (290)
Q Consensus       151 PE~~~~---~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~  221 (290)
                      ||++.+   ..++.++|||||||++|+|++|.+||...............      .......+..+.+||.+||+.||+
T Consensus       310 PE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  389 (419)
T 3i6u_A          310 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK  389 (419)
T ss_dssp             TTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTT
T ss_pred             ceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChh
Confidence            999864   56788999999999999999999988643322111111111      111223466799999999999999


Q ss_pred             CCCCHHHHHHHHHh
Q 044846          222 KQPTMKEVTLELAG  235 (290)
Q Consensus       222 ~Rps~~el~~~l~~  235 (290)
                      +|||+.|+++|.+-
T Consensus       390 ~Rps~~e~l~hp~~  403 (419)
T 3i6u_A          390 ARFTTEEALRHPWL  403 (419)
T ss_dssp             TSCCHHHHHHSGGG
T ss_pred             HCcCHHHHhCCccc
Confidence            99999999988653


No 204
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=1.5e-41  Score=298.37  Aligned_cols=228  Identities=23%  Similarity=0.302  Sum_probs=173.0

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHH--hcCCCceeeEEeEEEe-----CCcceEEEEeCCCCCHHHHHhhcCCCCCC
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILS--QINHRNVVKILGCCLE-----TEVPLLVYEFIPNGSLYQYIHEQTDDQLP   74 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~--~l~Hpniv~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~   74 (290)
                      |+.||||+++..   ....+..|.+++.  .++||||+++++.+..     ....++|||||++|+|.+++....     
T Consensus        36 ~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----  107 (336)
T 3g2f_A           36 ERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT-----  107 (336)
T ss_dssp             TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCC-----
T ss_pred             CeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhcc-----
Confidence            678999998743   2344555555544  5799999999986643     235689999999999999997653     


Q ss_pred             CCHHHHHHHHHHHHHHHHHHhhC---------CCCCeEeccCCCCceEeccCCcEEEeccccccccccCC-------cee
Q 044846           75 ITWEMRLRITVEVSRVLSYLHSV---------ASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDR-------THL  138 (290)
Q Consensus        75 ~~~~~~~~~~~~i~~~l~ylH~~---------~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-------~~~  138 (290)
                      .++..+..++.||+.||.|||+.         +   |+||||||+|||++.++.+||+|||+++......       ...
T Consensus       108 ~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~  184 (336)
T 3g2f_A          108 SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNA  184 (336)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC--------
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcEEEeeccceeecccccccCccccccc
Confidence            58889999999999999999998         7   9999999999999999999999999987543221       111


Q ss_pred             eccceecccccCcccccc-------CCCCCcccchhhHHHHHHHhcCCCCcccchhhhh----------------hhHHH
Q 044846          139 TTQVKVTFGYVDPKYFRS-------SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENR----------------SLAAY  195 (290)
Q Consensus       139 ~~~~~g~~~y~aPE~~~~-------~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~----------------~~~~~  195 (290)
                      .....||+.|+|||++.+       ..++.++|||||||++|+|++|..++........                .....
T Consensus       185 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (336)
T 3g2f_A          185 AISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVL  264 (336)
T ss_dssp             -CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHH
T ss_pred             cccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhh
Confidence            234568999999999986       3466789999999999999999766543221100                00000


Q ss_pred             hh-----h------hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhHhhh
Q 044846          196 FS-----K------EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGIRASI  240 (290)
Q Consensus       196 ~~-----~------~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~~~  240 (290)
                      ..     .      ......+..+.+||.+||+.||++|||+.|+++.|+.+....
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~  320 (336)
T 3g2f_A          265 VSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW  320 (336)
T ss_dssp             HTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred             hcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence            00     0      011235567999999999999999999999999999987654


No 205
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=1.6e-40  Score=295.50  Aligned_cols=225  Identities=20%  Similarity=0.263  Sum_probs=178.7

Q ss_pred             CceEEEEeecccC-chhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-----CcceEEEEeCCCCCHHHHHhhcCCCCCCC
Q 044846            2 EELWLLKKSKSVH-ESNVEQFINEVVILSQINHRNVVKILGCCLET-----EVPLLVYEFIPNGSLYQYIHEQTDDQLPI   75 (290)
Q Consensus         2 ~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~   75 (290)
                      |+.||+|++.... ....+.+.+|+++++.++||||+++++++...     ...++||||+. |+|.+++...     .+
T Consensus        52 ~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~-~~L~~~l~~~-----~~  125 (364)
T 3qyz_A           52 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ-----HL  125 (364)
T ss_dssp             TEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCS-EEHHHHHHHC-----CC
T ss_pred             CeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcccC-cCHHHHHHhC-----CC
Confidence            5679999997533 44457899999999999999999999999765     36799999995 6999999764     48


Q ss_pred             CHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCce--eeccceecccccCccc
Q 044846           76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH--LTTQVKVTFGYVDPKY  153 (290)
Q Consensus        76 ~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~g~~~y~aPE~  153 (290)
                      ++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++.........  ......||+.|+|||+
T Consensus       126 ~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  202 (364)
T 3qyz_A          126 SNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI  202 (364)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHH
Confidence            99999999999999999999999   999999999999999999999999998754432221  1234578999999998


Q ss_pred             cccC-CCCCcccchhhHHHHHHHhcCCCCcccchhhhhh--hHHHhhh------------------------------hh
Q 044846          154 FRSS-QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRS--LAAYFSK------------------------------EA  200 (290)
Q Consensus       154 ~~~~-~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~--~~~~~~~------------------------------~~  200 (290)
                      +.+. .++.++|||||||++|+|++|.+||.........  .......                              ..
T Consensus       203 ~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (364)
T 3qyz_A          203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL  282 (364)
T ss_dssp             HHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHH
T ss_pred             hcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHh
Confidence            7654 5899999999999999999999988644322111  1000000                              00


Q ss_pred             hHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 044846          201 EKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAG  235 (290)
Q Consensus       201 ~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~  235 (290)
                      ....+..+.+||.+||+.||++|||+.|++++.+-
T Consensus       283 ~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  317 (364)
T 3qyz_A          283 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL  317 (364)
T ss_dssp             CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGG
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcch
Confidence            01234678999999999999999999999988653


No 206
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=1.3e-40  Score=284.45  Aligned_cols=223  Identities=17%  Similarity=0.185  Sum_probs=175.1

Q ss_pred             CceEEEEeeccc---CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSV---HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|++...   .....+.+.+|+.+++.++||||+++++++...+..++||||+++++|.+++....    .+++.
T Consensus        36 ~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~  111 (276)
T 2h6d_A           36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG----RVEEM  111 (276)
T ss_dssp             CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHC----SCCHH
T ss_pred             CceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhccC----CCCHH
Confidence            678999998643   23346688999999999999999999999999999999999999999999998765    58899


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCC
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .+..++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++......  .......+++.|+|||++.+..
T Consensus       112 ~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~  186 (276)
T 2h6d_A          112 EARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRTSCGSPNYAAPEVISGRL  186 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---------------CCTGGGTTSC
T ss_pred             HHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCCC--cceecccCCccccCHHHHcCCC
Confidence            99999999999999999999   999999999999999999999999997654322  2223456889999999998876


Q ss_pred             C-CCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh--hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          159 F-TEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS--KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       159 ~-~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      + +.++||||||+++|+|++|..|+....... .......  ...+...+..+.++|.+||+.||.+|||+.|++++.+
T Consensus       187 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~  264 (276)
T 2h6d_A          187 YAGPEVDIWSCGVILYALLCGTLPFDDEHVPT-LFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEW  264 (276)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHH
T ss_pred             CCCccchHHHHHHHHHHHHhCCCCCCCCcHHH-HHHHhhcCcccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhChh
Confidence            5 578999999999999999998885432211 1111111  0112233567899999999999999999999998754


No 207
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=6.8e-41  Score=298.31  Aligned_cols=221  Identities=19%  Similarity=0.191  Sum_probs=165.9

Q ss_pred             CceEEEEeeccc--CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeC------CcceEEEEeCCCCCHHHHHhhcCCCCC
Q 044846            2 EELWLLKKSKSV--HESNVEQFINEVVILSQINHRNVVKILGCCLET------EVPLLVYEFIPNGSLYQYIHEQTDDQL   73 (290)
Q Consensus         2 ~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~------~~~~lv~e~~~~g~L~~~l~~~~~~~~   73 (290)
                      |+.||+|++...  .....+.+.+|+++++.++||||+++++++...      ...++|+|++ +++|.+++...     
T Consensus        54 ~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-----  127 (367)
T 2fst_X           54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ-----  127 (367)
T ss_dssp             TEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECC-CEECC-----C-----
T ss_pred             CCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHhcC-----
Confidence            678999998643  344567889999999999999999999999754      5679999999 78999998752     


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccc
Q 044846           74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKY  153 (290)
Q Consensus        74 ~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~  153 (290)
                      .+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++....    ......||..|+|||+
T Consensus       128 ~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~  200 (367)
T 2fst_X          128 KLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTAD----EMTGYVATRWYRAPEI  200 (367)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC-------------------CCCTTCCHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeeccccccccc----cCCCcCcCcCccChHH
Confidence            5899999999999999999999999   99999999999999999999999999865331    1234678999999999


Q ss_pred             ccc-CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhh--hHHHhh-----------hh-------------------h
Q 044846          154 FRS-SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRS--LAAYFS-----------KE-------------------A  200 (290)
Q Consensus       154 ~~~-~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~--~~~~~~-----------~~-------------------~  200 (290)
                      +.+ ..++.++|||||||++|+|++|.+||.........  +.....           ..                   .
T Consensus       201 ~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (367)
T 2fst_X          201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV  280 (367)
T ss_dssp             HTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHH
T ss_pred             HcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHH
Confidence            887 67899999999999999999999988654322111  000000           00                   0


Q ss_pred             hHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 044846          201 EKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAG  235 (290)
Q Consensus       201 ~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~  235 (290)
                      ....+..+.+||.+||+.||.+|||+.|+++|.+-
T Consensus       281 ~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~  315 (367)
T 2fst_X          281 FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF  315 (367)
T ss_dssp             TTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             CCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhh
Confidence            01124568899999999999999999999988553


No 208
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=2.9e-40  Score=285.40  Aligned_cols=223  Identities=21%  Similarity=0.264  Sum_probs=181.8

Q ss_pred             CceEEEEeecccC---------chhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCC
Q 044846            2 EELWLLKKSKSVH---------ESNVEQFINEVVILSQIN-HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDD   71 (290)
Q Consensus         2 ~~~~avK~~~~~~---------~~~~~~~~~E~~~l~~l~-Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~   71 (290)
                      |+.||+|+++...         ....+.+.+|+++++++. ||||+++++++...+..++||||+++++|.+++....  
T Consensus        42 ~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--  119 (298)
T 1phk_A           42 CKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--  119 (298)
T ss_dssp             TEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS--
T ss_pred             CceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhccC--
Confidence            6789999986533         123567889999999995 9999999999999999999999999999999998764  


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCc
Q 044846           72 QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDP  151 (290)
Q Consensus        72 ~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aP  151 (290)
                        .+++..+..++.||+.||.|||+++   ++||||||+||+++.++.+||+|||++......  .......|++.|+||
T Consensus       120 --~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aP  192 (298)
T 1phk_A          120 --TLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG--EKLREVCGTPSYLAP  192 (298)
T ss_dssp             --SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECCTT--CCBCCCCSCGGGCCH
T ss_pred             --CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecccchhhcCCC--cccccccCCccccCH
Confidence              5899999999999999999999999   999999999999999999999999997654322  223345688999999


Q ss_pred             cccc------cCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------hhhhHHHHHHHHHHHHHhhccC
Q 044846          152 KYFR------SSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------KEAEKEEVITFAMVAKRCLNLN  219 (290)
Q Consensus       152 E~~~------~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~d  219 (290)
                      |++.      ...++.++||||||+++|+|++|..|+........ ......      .......+..+.+++.+||+.|
T Consensus       193 E~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  271 (298)
T 1phk_A          193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLM-LRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQ  271 (298)
T ss_dssp             HHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSS
T ss_pred             HHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHH-HHHHhcCCcccCcccccccCHHHHHHHHHHccCC
Confidence            9985      45678899999999999999999998864432211 111111      1112345677999999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 044846          220 GKKQPTMKEVTLELA  234 (290)
Q Consensus       220 p~~Rps~~el~~~l~  234 (290)
                      |.+|||+.|++++..
T Consensus       272 p~~Rps~~~ll~h~~  286 (298)
T 1phk_A          272 PQKRYTAEEALAHPF  286 (298)
T ss_dssp             GGGSCCHHHHTTSGG
T ss_pred             cccCCCHHHHHhChH
Confidence            999999999987643


No 209
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=2.3e-40  Score=286.15  Aligned_cols=226  Identities=19%  Similarity=0.266  Sum_probs=178.5

Q ss_pred             CceEEEEeecccC--chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKSVH--ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.||+|+++...  ....+.+.+|+.+++.++||||+++++++...+..++||||+. |+|.+++......  .+++..
T Consensus        28 ~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~--~~~~~~  104 (299)
T 2r3i_A           28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALT--GIPLPL  104 (299)
T ss_dssp             CCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHTTTT--CCCHHH
T ss_pred             CceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-CCHHHHHHhhhcc--CCCHHH
Confidence            6789999986433  2334678899999999999999999999999999999999996 6999999875432  588899


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCC-
Q 044846           80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ-  158 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-  158 (290)
                      +..++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++....... .......+++.|+|||++.+.. 
T Consensus       105 ~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~  180 (299)
T 2r3i_A          105 IKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLGAKY  180 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS-BCTTSCBCCCTTCCHHHHTTCSS
T ss_pred             HHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc-cccCcccccccccCcHHhhcccc
Confidence            9999999999999999999   9999999999999999999999999876533211 1223356789999999998765 


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh--h----------------------------hhhHHHHHHH
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS--K----------------------------EAEKEEVITF  208 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~--~----------------------------~~~~~~~~~~  208 (290)
                      ++.++||||||+++|+|++|..||...............  .                            ......+..+
T Consensus       181 ~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (299)
T 2r3i_A          181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG  260 (299)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHH
T ss_pred             CChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHH
Confidence            788999999999999999999988654332211111000  0                            0011234678


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          209 AMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       209 ~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      .+|+.+||+.||++|||+.|++++.+
T Consensus       261 ~~li~~~L~~dP~~Rpt~~~~l~hp~  286 (299)
T 2r3i_A          261 RSLLSQMLHYDPNKRISAKAALAHPF  286 (299)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred             HHHHHHhcCcCcccCCCHHHHhcChh
Confidence            99999999999999999999998654


No 210
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=7.9e-41  Score=287.72  Aligned_cols=230  Identities=18%  Similarity=0.224  Sum_probs=169.3

Q ss_pred             CceEEEEeecccC-chhHHH-HHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKSVH-ESNVEQ-FINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~~~-~~~~~~-~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.||+|+++... ...... +..+...++.++||||+++++++...+..++||||+. |+|.+++.........+++..
T Consensus        32 ~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~  110 (290)
T 3fme_A           32 GQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDI  110 (290)
T ss_dssp             TEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHH
T ss_pred             CeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-cchHHHHHHHHhcCCCCCHHH
Confidence            6789999997532 223333 4444455777899999999999999999999999996 599888876433333699999


Q ss_pred             HHHHHHHHHHHHHHHhhC-CCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCcccc----
Q 044846           80 RLRITVEVSRVLSYLHSV-ASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYF----  154 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~-~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~----  154 (290)
                      ++.++.|++.||.|||++ +   |+||||||+||+++.++.+||+|||++......  .......||+.|+|||++    
T Consensus       111 ~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~  185 (290)
T 3fme_A          111 LGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLVDD--VAKDIDAGCKPYMAPERINPEL  185 (290)
T ss_dssp             HHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC-----------------CCCCCCSCHHHHSCCT
T ss_pred             HHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCccccccc--ccccccCCCccccChhhcChhh
Confidence            999999999999999998 8   999999999999999999999999997654322  222334688999999996    


Q ss_pred             ccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh----hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHH
Q 044846          155 RSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK----EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVT  230 (290)
Q Consensus       155 ~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~  230 (290)
                      .+..++.++||||||+++|+|++|..|+................    ......+..+.+++.+||+.||++|||+.|++
T Consensus       186 ~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l  265 (290)
T 3fme_A          186 NQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM  265 (290)
T ss_dssp             TC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             cCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHH
Confidence            45678889999999999999999999886432222222222111    11223566799999999999999999999999


Q ss_pred             HHHHhhH
Q 044846          231 LELAGIR  237 (290)
Q Consensus       231 ~~l~~~~  237 (290)
                      ++.+.-.
T Consensus       266 ~hp~f~~  272 (290)
T 3fme_A          266 QHPFFTL  272 (290)
T ss_dssp             TSHHHHH
T ss_pred             hCccccc
Confidence            8765443


No 211
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=6.2e-40  Score=287.73  Aligned_cols=221  Identities=19%  Similarity=0.286  Sum_probs=179.2

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCc------eeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCC
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRN------VVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPI   75 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpn------iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~   75 (290)
                      |+.||+|+++.. ....+.+.+|+++++.++|+|      |+++++++...+..++||||+ +++|.+++.....  .++
T Consensus        40 ~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~--~~~  115 (339)
T 1z57_A           40 GRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGF--LPF  115 (339)
T ss_dssp             TEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT--CCC
T ss_pred             CcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCC--CCC
Confidence            578999999753 345677889999999987654      999999999999999999999 8899999987543  258


Q ss_pred             CHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEecc-------------------CCcEEEeccccccccccCCc
Q 044846           76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD-------------------KYQAKISDFRTFKSRAIDRT  136 (290)
Q Consensus        76 ~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~-------------------~~~~kl~dfg~~~~~~~~~~  136 (290)
                      ++..+..++.||+.||.|||+++   |+||||||+|||++.                   ++.+||+|||+++....   
T Consensus       116 ~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~---  189 (339)
T 1z57_A          116 RLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE---  189 (339)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTS---
T ss_pred             cHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcc---
Confidence            89999999999999999999999   999999999999987                   66899999999865332   


Q ss_pred             eeeccceecccccCccccccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhh--hHHHhhh----------------
Q 044846          137 HLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRS--LAAYFSK----------------  198 (290)
Q Consensus       137 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~--~~~~~~~----------------  198 (290)
                       ......||+.|+|||++.+..++.++|||||||++|+|++|.+||.........  .......                
T Consensus       190 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  268 (339)
T 1z57_A          190 -HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFH  268 (339)
T ss_dssp             -CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEE
T ss_pred             -ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHh
Confidence             223457899999999999999999999999999999999999988654322111  0000000                


Q ss_pred             ---------------------------hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q 044846          199 ---------------------------EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLEL  233 (290)
Q Consensus       199 ---------------------------~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l  233 (290)
                                                 ......+..+.+||.+||+.||.+|||+.|++++.
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp  330 (339)
T 1z57_A          269 HDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHP  330 (339)
T ss_dssp             TTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSG
T ss_pred             hccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCH
Confidence                                       00123456789999999999999999999999774


No 212
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=9.1e-41  Score=294.15  Aligned_cols=230  Identities=18%  Similarity=0.237  Sum_probs=180.2

Q ss_pred             CceEEEEeeccc-CchhHHHHHHHHHH-HHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKSV-HESNVEQFINEVVI-LSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~~-~~~~~~~~~~E~~~-l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.||||+++.. .......+..|..+ ++.++||||+++++++...+..++||||+. |+|.+++.........+++..
T Consensus        76 ~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~  154 (340)
T 3an0_A           76 GQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDI  154 (340)
T ss_dssp             TEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCS-EEHHHHHHHHHHTSCCCCHHH
T ss_pred             CCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhh-CcHHHHHHHHHhcCCCCCHHH
Confidence            678999999753 33445566677776 677899999999999999999999999996 599999875422233689999


Q ss_pred             HHHHHHHHHHHHHHHhhC-CCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCcccccc--
Q 044846           80 RLRITVEVSRVLSYLHSV-ASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRS--  156 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~-~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--  156 (290)
                      ++.++.||+.||.|||++ +   |+||||||+|||++.++.+||+|||+++....  ........||+.|+|||++.+  
T Consensus       155 ~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~  229 (340)
T 3an0_A          155 LGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLVD--SVAKTIDAGCKPYMAPERINPEL  229 (340)
T ss_dssp             HHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHHHSC--HHHHHHSSCCCCCCCHHHHSCCT
T ss_pred             HHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCceeccc--ccccccCCCCccccCcccccccc
Confidence            999999999999999987 8   99999999999999999999999999764321  112233568999999999643  


Q ss_pred             --CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh----hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHH
Q 044846          157 --SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK----EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVT  230 (290)
Q Consensus       157 --~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~  230 (290)
                        ..++.++|||||||++|+|++|..|+.........+......    ......+..+.+||.+||+.||++|||+.|++
T Consensus       230 ~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell  309 (340)
T 3an0_A          230 NQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM  309 (340)
T ss_dssp             TCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             ccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCCcccCcCHHHHh
Confidence              468889999999999999999998886432222222221111    11223467799999999999999999999999


Q ss_pred             HHHHhhH
Q 044846          231 LELAGIR  237 (290)
Q Consensus       231 ~~l~~~~  237 (290)
                      ++.+...
T Consensus       310 ~hp~f~~  316 (340)
T 3an0_A          310 QHPFFTL  316 (340)
T ss_dssp             TSHHHHH
T ss_pred             cCcCccc
Confidence            8866544


No 213
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=1.4e-40  Score=290.95  Aligned_cols=223  Identities=20%  Similarity=0.185  Sum_probs=174.2

Q ss_pred             CceEEEEeecccC--------chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCC
Q 044846            2 EELWLLKKSKSVH--------ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL   73 (290)
Q Consensus         2 ~~~~avK~~~~~~--------~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~   73 (290)
                      |+.||||++....        ......+.+|+++++.++||||+++++++.... .++||||+++|+|.+++....    
T Consensus        35 ~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~----  109 (322)
T 2ycf_A           35 CKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNK----  109 (322)
T ss_dssp             TEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEEECCTTEETHHHHSTTC----
T ss_pred             CcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEEecCCCCcHHHHHhccC----
Confidence            5789999986422        223446889999999999999999999987655 899999999999999997644    


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCc---EEEeccccccccccCCceeeccceecccccC
Q 044846           74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ---AKISDFRTFKSRAIDRTHLTTQVKVTFGYVD  150 (290)
Q Consensus        74 ~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~---~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~a  150 (290)
                      .+++..++.++.||+.||.|||+++   |+||||||+||+++.++.   +||+|||+++....  ........|++.|+|
T Consensus       110 ~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~gt~~y~a  184 (322)
T 2ycf_A          110 RLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYLA  184 (322)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECCCTTCEECCC--CHHHHHHHSCCTTCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEccCccceeccc--ccccccccCCcCccC
Confidence            5899999999999999999999999   999999999999987654   99999999765332  122234568999999


Q ss_pred             ccccc---cCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------hhhhHHHHHHHHHHHHHhhccCCC
Q 044846          151 PKYFR---SSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------KEAEKEEVITFAMVAKRCLNLNGK  221 (290)
Q Consensus       151 PE~~~---~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~  221 (290)
                      ||++.   ...++.++|||||||++|+|++|..||...............      .......+..+.+||.+||+.||+
T Consensus       185 PE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~  264 (322)
T 2ycf_A          185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK  264 (322)
T ss_dssp             HHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTT
T ss_pred             chhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHh
Confidence            99974   456889999999999999999999988643322111111111      111123456799999999999999


Q ss_pred             CCCCHHHHHHHHH
Q 044846          222 KQPTMKEVTLELA  234 (290)
Q Consensus       222 ~Rps~~el~~~l~  234 (290)
                      +|||+.+++++.+
T Consensus       265 ~Rps~~~~l~h~~  277 (322)
T 2ycf_A          265 ARFTTEEALRHPW  277 (322)
T ss_dssp             TSCCHHHHHTSGG
T ss_pred             hCCCHHHHhhCcC
Confidence            9999999997744


No 214
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=3.6e-41  Score=291.51  Aligned_cols=230  Identities=21%  Similarity=0.252  Sum_probs=167.8

Q ss_pred             CceEEEEeecccC-chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcC----CCCCCCC
Q 044846            2 EELWLLKKSKSVH-ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQT----DDQLPIT   76 (290)
Q Consensus         2 ~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~   76 (290)
                      |+.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..++||||+++|+|.+++....    .....++
T Consensus        40 ~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  119 (303)
T 2vwi_A           40 KEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLD  119 (303)
T ss_dssp             -CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSC
T ss_pred             CcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCC
Confidence            6789999986433 3446678899999999999999999999999999999999999999999997521    1122589


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCC----ceeeccceecccccCcc
Q 044846           77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDR----THLTTQVKVTFGYVDPK  152 (290)
Q Consensus        77 ~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~g~~~y~aPE  152 (290)
                      +..++.++.||+.||.|||+++   |+||||||+||+++.++.+||+|||++.......    ........|++.|+|||
T Consensus       120 ~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE  196 (303)
T 2vwi_A          120 ESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE  196 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHH
Confidence            9999999999999999999999   9999999999999999999999999876433211    11223456889999999


Q ss_pred             cccc-CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh-----------hhhHHHHHHHHHHHHHhhccCC
Q 044846          153 YFRS-SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK-----------EAEKEEVITFAMVAKRCLNLNG  220 (290)
Q Consensus       153 ~~~~-~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~li~~cl~~dp  220 (290)
                      ++.+ ..++.++||||||+++|+|++|..|+................           ......+..+.+++.+||+.||
T Consensus       197 ~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp  276 (303)
T 2vwi_A          197 VMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDP  276 (303)
T ss_dssp             HHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSG
T ss_pred             HhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCCh
Confidence            9876 568999999999999999999999886433222111111100           0011234578999999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 044846          221 KKQPTMKEVTLELA  234 (290)
Q Consensus       221 ~~Rps~~el~~~l~  234 (290)
                      .+|||+.+++++.+
T Consensus       277 ~~Rps~~~ll~h~~  290 (303)
T 2vwi_A          277 EKRPTAAELLRHKF  290 (303)
T ss_dssp             GGSCCHHHHHTSTT
T ss_pred             hhCcCHHHHhhChh
Confidence            99999999997643


No 215
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=2.3e-41  Score=301.67  Aligned_cols=222  Identities=10%  Similarity=0.048  Sum_probs=161.1

Q ss_pred             CceEEEEeecccC---chhHHHHHHHHHHHHhc--CCCceeeEE-------eEEEeCC-----------------cceEE
Q 044846            2 EELWLLKKSKSVH---ESNVEQFINEVVILSQI--NHRNVVKIL-------GCCLETE-----------------VPLLV   52 (290)
Q Consensus         2 ~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l--~Hpniv~~~-------~~~~~~~-----------------~~~lv   52 (290)
                      |+.||+|+++...   ....+.+.+|+.+++.|  +||||++++       +++...+                 ..|||
T Consensus        87 ~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv  166 (371)
T 3q60_A           87 LEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLL  166 (371)
T ss_dssp             TEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEE
T ss_pred             CceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEE
Confidence            6789999997643   34466788886655555  699988755       4444332                 37999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCHHHH------HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccc
Q 044846           53 YEFIPNGSLYQYIHEQTDDQLPITWEMR------LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFR  126 (290)
Q Consensus        53 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~------~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg  126 (290)
                      ||||. |+|.+++.....   .++...+      ..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||
T Consensus       167 ~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DFG  239 (371)
T 3q60_A          167 MPAAS-VDLELLFSTLDF---VYVFRGDEGILALHILTAQLIRLAANLQSKG---LVHGHFTPDNLFIMPDGRLMLGDVS  239 (371)
T ss_dssp             ECCCS-EEHHHHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---EEETTCSGGGEEECTTSCEEECCGG
T ss_pred             ecCCC-CCHHHHHHHhcc---ccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---CccCcCCHHHEEECCCCCEEEEecc
Confidence            99997 899999987532   2344445      677799999999999999   9999999999999999999999999


Q ss_pred             cccccccCCceeeccceecccccCcccccc--CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHH----------
Q 044846          127 TFKSRAIDRTHLTTQVKVTFGYVDPKYFRS--SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAA----------  194 (290)
Q Consensus       127 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~----------  194 (290)
                      +++....    ......+++.|+|||++.+  ..++.++|||||||++|+|++|..||............          
T Consensus       240 ~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~  315 (371)
T 3q60_A          240 ALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTD  315 (371)
T ss_dssp             GEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCC
T ss_pred             eeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhcccc
Confidence            9875431    1213455689999999987  67999999999999999999999988655322110000          


Q ss_pred             HhhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          195 YFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       195 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      ..........+..+.+||.+||+.||++|||+.+++++.+
T Consensus       316 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~  355 (371)
T 3q60_A          316 SLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPE  355 (371)
T ss_dssp             SCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHH
T ss_pred             ccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHH
Confidence            0001111244677999999999999999999999987754


No 216
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=2.6e-40  Score=288.02  Aligned_cols=224  Identities=19%  Similarity=0.230  Sum_probs=177.8

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEE--------------eCCcceEEEEeCCCCCHHHHHhh
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCL--------------ETEVPLLVYEFIPNGSLYQYIHE   67 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~--------------~~~~~~lv~e~~~~g~L~~~l~~   67 (290)
                      |+.||+|++...+....+.+.+|+++++.++||||+++++++.              ..+..++||||+. |+|.+++..
T Consensus        36 ~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~  114 (320)
T 2i6l_A           36 DKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ  114 (320)
T ss_dssp             TEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTT
T ss_pred             CeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCceeEEeeccC-CCHHHHhhc
Confidence            6789999998777777889999999999999999999999874              3467799999996 699999964


Q ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEec-cCCcEEEeccccccccccCC--ceeecccee
Q 044846           68 QTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLV-DKYQAKISDFRTFKSRAIDR--THLTTQVKV  144 (290)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~-~~~~~kl~dfg~~~~~~~~~--~~~~~~~~g  144 (290)
                      .     ++++..++.++.|++.||.|||+++   |+||||||+||+++ .++.+||+|||+++......  ........+
T Consensus       115 ~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~  186 (320)
T 2i6l_A          115 G-----PLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV  186 (320)
T ss_dssp             C-----CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGS
T ss_pred             C-----CccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccc
Confidence            3     4889999999999999999999999   99999999999997 56799999999987543211  112233456


Q ss_pred             cccccCcccccc-CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh-------------------------
Q 044846          145 TFGYVDPKYFRS-SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK-------------------------  198 (290)
Q Consensus       145 ~~~y~aPE~~~~-~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~-------------------------  198 (290)
                      +..|+|||++.+ ..++.++||||||+++|+|++|..||........ .......                         
T Consensus       187 ~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (320)
T 2i6l_A          187 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ-MQLILESIPVVHEEDRQELLSVIPVYIRNDMT  265 (320)
T ss_dssp             CCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTT
T ss_pred             cccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCchhhhhhhhhcCccccccccc
Confidence            888999998875 6788999999999999999999998865432211 1100000                         


Q ss_pred             -------hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 044846          199 -------EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAG  235 (290)
Q Consensus       199 -------~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~  235 (290)
                             ......+..+.+||.+||+.||++|||+.|++++.+-
T Consensus       266 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~  309 (320)
T 2i6l_A          266 EPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYM  309 (320)
T ss_dssp             SCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHH
T ss_pred             CCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccc
Confidence                   0011235679999999999999999999999987653


No 217
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=2.4e-40  Score=301.05  Aligned_cols=226  Identities=16%  Similarity=0.165  Sum_probs=168.4

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCC---CCH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLP---ITW   77 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~---~~~   77 (290)
                      |+.||||++...   ..+.+.+|+++++.+ +||||+++++++...+..+|||||| +|+|.+++.........   .++
T Consensus        39 g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~-~gsL~~~l~~~~~~~~~~~~~~~  114 (434)
T 2rio_A           39 GRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKE  114 (434)
T ss_dssp             SSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC-SEEHHHHHHTC------------
T ss_pred             CeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC-CCCHHHHHhccCCCchhhhhccc
Confidence            678999998642   345678999999987 8999999999999999999999999 46999999865422111   122


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccC-------------CcEEEeccccccccccCCce---eecc
Q 044846           78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDK-------------YQAKISDFRTFKSRAIDRTH---LTTQ  141 (290)
Q Consensus        78 ~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~-------------~~~kl~dfg~~~~~~~~~~~---~~~~  141 (290)
                      ..++.++.||+.||.|||+++   |+||||||+|||++.+             +.+||+|||+++........   ....
T Consensus       115 ~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~  191 (434)
T 2rio_A          115 YNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNN  191 (434)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC-----------
T ss_pred             hhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecC
Confidence            345679999999999999999   9999999999999754             48999999998765432221   1234


Q ss_pred             ceecccccCcccccc-------CCCCCcccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHh-h-----hhhhHHHHHH
Q 044846          142 VKVTFGYVDPKYFRS-------SQFTEKSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYF-S-----KEAEKEEVIT  207 (290)
Q Consensus       142 ~~g~~~y~aPE~~~~-------~~~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~  207 (290)
                      ..||+.|+|||++.+       ..++.++|||||||++|+|++ |..|+.............. .     .......+.+
T Consensus       192 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  271 (434)
T 2rio_A          192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAE  271 (434)
T ss_dssp             ---CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHHHHTCCCCCCCTTCCCHHHHHH
T ss_pred             CCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHHhcCCCCcccccccccccchHH
Confidence            578999999999976       568899999999999999998 7877754432222111110 0     1112356678


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          208 FAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       208 ~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      +.+||.+||+.||.+|||+.+++++..
T Consensus       272 ~~~li~~~L~~dP~~Rps~~eil~hp~  298 (434)
T 2rio_A          272 ATDLISQMIDHDPLKRPTAMKVLRHPL  298 (434)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred             HHHHHHHHhhCChhhCCCHHHHHhCCc
Confidence            999999999999999999999997643


No 218
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=4.5e-40  Score=284.29  Aligned_cols=223  Identities=23%  Similarity=0.371  Sum_probs=170.5

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEe-------------CCcceEEEEeCCCCCHHHHHhhc
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLE-------------TEVPLLVYEFIPNGSLYQYIHEQ   68 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~   68 (290)
                      |+.||+|+++.. ....+.+.+|+.+++.++||||+++++++..             .+..++||||+++|+|.+++...
T Consensus        31 ~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  109 (303)
T 1zy4_A           31 SRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE  109 (303)
T ss_dssp             CCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHS
T ss_pred             CeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhcc
Confidence            678999999653 4456789999999999999999999999865             34679999999999999999864


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCC-------------
Q 044846           69 TDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDR-------------  135 (290)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-------------  135 (290)
                      .   ..+++..++.++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++.......             
T Consensus       110 ~---~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~  183 (303)
T 1zy4_A          110 N---LNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS  183 (303)
T ss_dssp             C---GGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCCCSCTTC---------------
T ss_pred             c---cccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhcccccccccc
Confidence            3   25788899999999999999999999   9999999999999999999999999976533211             


Q ss_pred             ceeeccceecccccCccccccC-CCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------hhhhHHHHHHH
Q 044846          136 THLTTQVKVTFGYVDPKYFRSS-QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------KEAEKEEVITF  208 (290)
Q Consensus       136 ~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~  208 (290)
                      ........|+..|+|||++.+. .++.++|||||||++|+|+++   +...............      .......+..+
T Consensus       184 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (303)
T 1zy4_A          184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP---FSTGMERVNILKKLRSVSIEFPPDFDDNKMKVE  260 (303)
T ss_dssp             ----------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHSC---CSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHH
T ss_pred             ccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHhc---cCCchhHHHHHHhccccccccCccccccchHHH
Confidence            1122345688999999999865 689999999999999999983   2222111111111111      11222344568


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          209 AMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       209 ~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      .++|.+||+.||.+|||+.+++++.+
T Consensus       261 ~~li~~~l~~dp~~Rps~~~ll~h~~  286 (303)
T 1zy4_A          261 KKIIRLLIDHDPNKRPGARTLLNSGW  286 (303)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHSSC
T ss_pred             HHHHHHHHhcCcccCcCHHHHhCCCC
Confidence            89999999999999999999998754


No 219
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=7.7e-40  Score=300.70  Aligned_cols=230  Identities=16%  Similarity=0.133  Sum_probs=183.2

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCC-CceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINH-RNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~H-pniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      |+.||||++.....  ...+.+|+++++.|.| ++|+.+..++...+..+|||||+ +++|.+++.....   .+++..+
T Consensus        32 ~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~---~l~~~~~  105 (483)
T 3sv0_A           32 NEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSR---KLSLKTV  105 (483)
T ss_dssp             CCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT---CCCHHHH
T ss_pred             CcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHhhcC---CCCHHHH
Confidence            67899998765332  2357899999999976 66667777777888899999999 9999999986433   5899999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEe---ccCCcEEEeccccccccccCCce------eeccceecccccCc
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILL---VDKYQAKISDFRTFKSRAIDRTH------LTTQVKVTFGYVDP  151 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~---~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~g~~~y~aP  151 (290)
                      +.++.||+.||.|||+++   |+||||||+|||+   +.++.+||+|||+++........      ......||..|+||
T Consensus       106 ~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP  182 (483)
T 3sv0_A          106 LMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASV  182 (483)
T ss_dssp             HHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCH
T ss_pred             HHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCH
Confidence            999999999999999999   9999999999999   68899999999998754432221      12256789999999


Q ss_pred             cccccCCCCCcccchhhHHHHHHHhcCCCCcccchhh--hhhhHHHhh-------hhhhHHHHHHHHHHHHHhhccCCCC
Q 044846          152 KYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEE--NRSLAAYFS-------KEAEKEEVITFAMVAKRCLNLNGKK  222 (290)
Q Consensus       152 E~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~--~~~~~~~~~-------~~~~~~~~~~~~~li~~cl~~dp~~  222 (290)
                      |++.+..++.++|||||||++|+|++|..||......  ...+.....       .......+.++.+||.+||+.||++
T Consensus       183 E~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~  262 (483)
T 3sv0_A          183 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDD  262 (483)
T ss_dssp             HHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTC
T ss_pred             HHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhh
Confidence            9999999999999999999999999999988643221  111111100       1111234567999999999999999


Q ss_pred             CCCHHHHHHHHHhhHhhh
Q 044846          223 QPTMKEVTLELAGIRASI  240 (290)
Q Consensus       223 Rps~~el~~~l~~~~~~~  240 (290)
                      ||++.+|++.|+.+....
T Consensus       263 RPs~~el~~~L~~l~~~~  280 (483)
T 3sv0_A          263 KPDYSYLKRLFRDLFIRE  280 (483)
T ss_dssp             CCCHHHHHHHHHHHHHHT
T ss_pred             CcCHHHHHHHHHHHHHHc
Confidence            999999999998887644


No 220
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=6.1e-41  Score=295.92  Aligned_cols=225  Identities=19%  Similarity=0.263  Sum_probs=181.4

Q ss_pred             CceEEEEeecccCch-----------------hHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHH
Q 044846            2 EELWLLKKSKSVHES-----------------NVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQY   64 (290)
Q Consensus         2 ~~~~avK~~~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~   64 (290)
                      |+.||+|++......                 ..+.+.+|+++++.++||||+++++++...+..++||||+++|+|.++
T Consensus        54 ~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~  133 (348)
T 2pml_X           54 NKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKF  133 (348)
T ss_dssp             TEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEESSSEEEEEEECCTTCBSSEE
T ss_pred             CceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeccCCCcHHHH
Confidence            678999998642211                 127899999999999999999999999999999999999999999998


Q ss_pred             ------HhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCce
Q 044846           65 ------IHEQTDDQLPITWEMRLRITVEVSRVLSYLHS-VASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH  137 (290)
Q Consensus        65 ------l~~~~~~~~~~~~~~~~~~~~~i~~~l~ylH~-~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~  137 (290)
                            +....  ...+++..++.++.|++.||.|||+ ++   |+||||||+||+++.++.+||+|||.+......   
T Consensus       134 ~~~~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~---  205 (348)
T 2pml_X          134 DEYFFVLDKNY--TCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK---  205 (348)
T ss_dssp             SSSEESSCSSS--CCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEECTTSCEEECCCTTCEECBTT---
T ss_pred             HHHhhhhhhcc--ccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEEcCCCcEEEeccccccccccc---
Confidence                  54421  2368999999999999999999999 88   999999999999999999999999997654322   


Q ss_pred             eeccceecccccCccccccC-CCCC-cccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh--hhh------------
Q 044846          138 LTTQVKVTFGYVDPKYFRSS-QFTE-KSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK--EAE------------  201 (290)
Q Consensus       138 ~~~~~~g~~~y~aPE~~~~~-~~~~-~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~------------  201 (290)
                      ......|+..|+|||++.+. .++. ++||||||+++|+|++|..|+................  ..+            
T Consensus       206 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  285 (348)
T 2pml_X          206 KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTN  285 (348)
T ss_dssp             EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC
T ss_pred             cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccc
Confidence            33446789999999999877 5666 8999999999999999999886543312222111111  001            


Q ss_pred             -------HHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          202 -------KEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       202 -------~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                             ...+..+.+||.+||+.||.+|||+.|++++.+
T Consensus       286 ~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~  325 (348)
T 2pml_X          286 KKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEW  325 (348)
T ss_dssp             --------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGG
T ss_pred             cccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCcc
Confidence                   334677999999999999999999999998754


No 221
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.8e-40  Score=297.12  Aligned_cols=223  Identities=18%  Similarity=0.221  Sum_probs=173.8

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-----------------------------------
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLET-----------------------------------   46 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~-----------------------------------   46 (290)
                      |+.||+|++......    ..+|+++++.++||||++++++|...                                   
T Consensus        32 ~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (383)
T 3eb0_A           32 GKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNP  107 (383)
T ss_dssp             CCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC-----------------------------------
T ss_pred             CCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccC
Confidence            678999998643222    23799999999999999999998543                                   


Q ss_pred             ---CcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEec-cCCcEEE
Q 044846           47 ---EVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLV-DKYQAKI  122 (290)
Q Consensus        47 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~-~~~~~kl  122 (290)
                         ...++||||++ |+|.+.+.........+++..++.++.||+.||.|||+++   |+||||||+|||++ .++.+||
T Consensus       108 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---i~H~Dikp~Nil~~~~~~~~kl  183 (383)
T 3eb0_A          108 SQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG---ICHRDIKPQNLLVNSKDNTLKL  183 (383)
T ss_dssp             --CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEEETTTTEEEE
T ss_pred             CCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCc---CccCccCHHHEEEcCCCCcEEE
Confidence               34789999996 5888888754333336899999999999999999999999   99999999999998 6889999


Q ss_pred             eccccccccccCCceeeccceecccccCccccccC-CCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHH--hh--
Q 044846          123 SDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSS-QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAY--FS--  197 (290)
Q Consensus       123 ~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~--~~--  197 (290)
                      +|||+++.....  .......+|..|+|||++.+. .++.++||||+||++|+|++|.+||.............  ..  
T Consensus       184 ~Dfg~a~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p  261 (383)
T 3eb0_A          184 CDFGSAKKLIPS--EPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTP  261 (383)
T ss_dssp             CCCTTCEECCTT--SCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred             EECCCCcccCCC--CCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence            999998754322  223345678999999998775 48999999999999999999999886543322111110  00  


Q ss_pred             --------------------------hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          198 --------------------------KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       198 --------------------------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                                                ...+...+..+.+||.+||+.||.+|||+.|+++|.+
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  324 (383)
T 3eb0_A          262 TKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPF  324 (383)
T ss_dssp             CHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGG
T ss_pred             CHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHH
Confidence                                      0011123456899999999999999999999998744


No 222
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=4.2e-40  Score=295.15  Aligned_cols=222  Identities=23%  Similarity=0.232  Sum_probs=177.4

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcC--------CCceeeEEeEEE----eCCcceEEEEeCCCCCHHHHHhhcC
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQIN--------HRNVVKILGCCL----ETEVPLLVYEFIPNGSLYQYIHEQT   69 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~--------Hpniv~~~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~   69 (290)
                      |+.||||+++.. ....+.+.+|+++++.++        ||||+++++++.    .....++||||+ +++|.+.+....
T Consensus        62 ~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~  139 (397)
T 1wak_A           62 KKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSN  139 (397)
T ss_dssp             TEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTT
T ss_pred             CeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEecc-CccHHHHHHhcc
Confidence            678999999743 445678899999999985        788999999998    456789999999 678888776643


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHhhC-CCCCeEeccCCCCceEeccCC------------------------------
Q 044846           70 DDQLPITWEMRLRITVEVSRVLSYLHSV-ASIPIYHLDIKSANILLVDKY------------------------------  118 (290)
Q Consensus        70 ~~~~~~~~~~~~~~~~~i~~~l~ylH~~-~~~~iiHrdlkp~Nil~~~~~------------------------------  118 (290)
                      ..  .+++..++.++.||+.||.|||++ +   |+||||||+|||++.++                              
T Consensus       140 ~~--~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (397)
T 1wak_A          140 YQ--GLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAP  214 (397)
T ss_dssp             TS--CCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHHHHHHHC-------------------
T ss_pred             cC--CCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCC
Confidence            22  589999999999999999999998 8   99999999999999775                              


Q ss_pred             -------------------cEEEeccccccccccCCceeeccceecccccCccccccCCCCCcccchhhHHHHHHHhcCC
Q 044846          119 -------------------QAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTK  179 (290)
Q Consensus       119 -------------------~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwS~G~il~~l~~~~  179 (290)
                                         .+||+|||++......    .....||..|+|||++.+..++.++|||||||++|+|++|.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  290 (397)
T 1wak_A          215 ATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGD  290 (397)
T ss_dssp             --CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             cccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCC
Confidence                               7999999998654321    23456899999999999999999999999999999999999


Q ss_pred             CCcccchhh-----hhh---hHHHhh-----------------------------------------hhhhHHHHHHHHH
Q 044846          180 PIHLVDVEE-----NRS---LAAYFS-----------------------------------------KEAEKEEVITFAM  210 (290)
Q Consensus       180 ~~~~~~~~~-----~~~---~~~~~~-----------------------------------------~~~~~~~~~~~~~  210 (290)
                      .||......     ...   ......                                         .......+..+.+
T Consensus       291 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (397)
T 1wak_A          291 YLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTD  370 (397)
T ss_dssp             CSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHH
T ss_pred             CCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHH
Confidence            988532210     000   000000                                         0112445677999


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHH
Q 044846          211 VAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       211 li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      ||.+||+.||++|||+.|+++|.+
T Consensus       371 li~~~L~~dP~~Rpt~~e~l~hp~  394 (397)
T 1wak_A          371 FLLPMLELIPEKRATAAECLRHPW  394 (397)
T ss_dssp             HHGGGGCSSGGGSCCHHHHHTSGG
T ss_pred             HHHHHhccChhhcCCHHHHhhCcc
Confidence            999999999999999999997643


No 223
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=3.1e-40  Score=293.14  Aligned_cols=224  Identities=18%  Similarity=0.179  Sum_probs=170.2

Q ss_pred             CceEEEEeecccCc-----------hhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-----CcceEEEEeCCCCCHHHHH
Q 044846            2 EELWLLKKSKSVHE-----------SNVEQFINEVVILSQINHRNVVKILGCCLET-----EVPLLVYEFIPNGSLYQYI   65 (290)
Q Consensus         2 ~~~~avK~~~~~~~-----------~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~-----~~~~lv~e~~~~g~L~~~l   65 (290)
                      |+.||+|++.....           ...+.+.+|+++++.++||||+++++++...     ...++||||+. |+|.+++
T Consensus        46 ~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~  124 (362)
T 3pg1_A           46 GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVI  124 (362)
T ss_dssp             SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHH
T ss_pred             CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCC-CCHHHHH
Confidence            67899999854222           2247899999999999999999999999653     35799999996 6999998


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceec
Q 044846           66 HEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVT  145 (290)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~  145 (290)
                      .....   .+++..+..++.||+.||.|||+++   |+||||||+||+++.++.+||+|||++.....  ........|+
T Consensus       125 ~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~t  196 (362)
T 3pg1_A          125 HDQRI---VISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTA--DANKTHYVTH  196 (362)
T ss_dssp             HCTTS---CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCTTC-----------------C
T ss_pred             Hhccc---CCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEEcCCCCEEEEecCccccccc--ccccceeccc
Confidence            75432   5899999999999999999999999   99999999999999999999999999764322  2223445688


Q ss_pred             ccccCcccccc-CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhh--hHHHhhh------------------------
Q 044846          146 FGYVDPKYFRS-SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRS--LAAYFSK------------------------  198 (290)
Q Consensus       146 ~~y~aPE~~~~-~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~--~~~~~~~------------------------  198 (290)
                      +.|+|||++.+ ..++.++|||||||++|+|++|..||.........  .......                        
T Consensus       197 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (362)
T 3pg1_A          197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSN  276 (362)
T ss_dssp             GGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCC
T ss_pred             ceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhccc
Confidence            99999999887 67899999999999999999999988654321111  0000000                        


Q ss_pred             -------hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          199 -------EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       199 -------~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                             ......+..+.+||.+||+.||.+|||+.|++++.+
T Consensus       277 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~  319 (362)
T 3pg1_A          277 VPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPY  319 (362)
T ss_dssp             CCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred             CChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCch
Confidence                   001122456889999999999999999999998754


No 224
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=6.4e-40  Score=292.43  Aligned_cols=220  Identities=19%  Similarity=0.200  Sum_probs=174.8

Q ss_pred             CceEEEEeeccc--CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcc------eEEEEeCCCCCHHHHHhhcCCCCC
Q 044846            2 EELWLLKKSKSV--HESNVEQFINEVVILSQINHRNVVKILGCCLETEVP------LLVYEFIPNGSLYQYIHEQTDDQL   73 (290)
Q Consensus         2 ~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~------~lv~e~~~~g~L~~~l~~~~~~~~   73 (290)
                      |+.||+|+++..  .....+.+.+|+.+++.++||||+++++++...+..      ++||||+. |+|.+++..      
T Consensus        67 ~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~------  139 (371)
T 4exu_A           67 GEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMGM------  139 (371)
T ss_dssp             TEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECCC-EEHHHHTTS------
T ss_pred             CCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEcccc-ccHHHHhhc------
Confidence            678999999753  344467899999999999999999999999877654      99999995 689888742      


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccc
Q 044846           74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKY  153 (290)
Q Consensus        74 ~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~  153 (290)
                      .+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++....    ......||+.|+|||+
T Consensus       140 ~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~----~~~~~~~t~~y~aPE~  212 (371)
T 4exu_A          140 EFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADA----EMTGYVVTRWYRAPEV  212 (371)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC------------CTTCCCTTSCHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCccccccc----CcCCcccCccccCHHH
Confidence            4889999999999999999999999   99999999999999999999999999864332    2234567999999999


Q ss_pred             ccc-CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHh--h------------------------------hhh
Q 044846          154 FRS-SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYF--S------------------------------KEA  200 (290)
Q Consensus       154 ~~~-~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~--~------------------------------~~~  200 (290)
                      +.+ ..++.++|||||||++|+|++|..||..............  .                              ...
T Consensus       213 ~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (371)
T 4exu_A          213 ILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQL  292 (371)
T ss_dssp             HSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHH
T ss_pred             hcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHh
Confidence            887 6789999999999999999999998865432211110000  0                              000


Q ss_pred             hHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 044846          201 EKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAG  235 (290)
Q Consensus       201 ~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~  235 (290)
                      ....+..+.+||.+||+.||++|||+.|++++.+.
T Consensus       293 ~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f  327 (371)
T 4exu_A          293 FPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF  327 (371)
T ss_dssp             STTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGG
T ss_pred             ccccChHHHHHHHHHCCCChhhcCCHHHHhcCccc
Confidence            11235678999999999999999999999988653


No 225
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=3.5e-40  Score=298.80  Aligned_cols=224  Identities=21%  Similarity=0.222  Sum_probs=172.4

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeC------CcceEEEEeCCCCCHHHHHhhcCCCCCCC
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLET------EVPLLVYEFIPNGSLYQYIHEQTDDQLPI   75 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~   75 (290)
                      |+.||||++.....    .+.+|+++|+.|+|||||+++++|...      ..+++||||++ ++|..++.........+
T Consensus        79 ~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~l  153 (420)
T 1j1b_A           79 GELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-ETVYRVARHYSRAKQTL  153 (420)
T ss_dssp             CCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCC-EEHHHHHHHHHHTTCCC
T ss_pred             CcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhccc-ccHHHHHHHHhhccCCC
Confidence            67899999864322    234799999999999999999998642      23679999996 47877776532223368


Q ss_pred             CHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccC-CcEEEeccccccccccCCceeeccceecccccCcccc
Q 044846           76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDK-YQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYF  154 (290)
Q Consensus        76 ~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~  154 (290)
                      ++..++.++.||+.||.|||+++   |+||||||+|||++.+ +.+||+|||+++.....  .......||+.|+|||++
T Consensus       154 ~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~--~~~~~~~~t~~y~aPE~~  228 (420)
T 1j1b_A          154 PVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRYYRAPELI  228 (420)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECCTT--CCCCSCCSCTTSCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhhhcccC--CCceeeeeCCCcCCHHHH
Confidence            99999999999999999999999   9999999999999965 56899999998754322  122345689999999998


Q ss_pred             ccC-CCCCcccchhhHHHHHHHhcCCCCcccchhhhhhh--HHHhhh----------------------------hhhHH
Q 044846          155 RSS-QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSL--AAYFSK----------------------------EAEKE  203 (290)
Q Consensus       155 ~~~-~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~--~~~~~~----------------------------~~~~~  203 (290)
                      .+. .++.++|||||||++|||++|.+||..........  ......                            .....
T Consensus       229 ~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  308 (420)
T 1j1b_A          229 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPR  308 (420)
T ss_dssp             TTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTT
T ss_pred             cCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCC
Confidence            765 78999999999999999999999886543221111  110000                            00112


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 044846          204 EVITFAMVAKRCLNLNGKKQPTMKEVTLELAG  235 (290)
Q Consensus       204 ~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~  235 (290)
                      .+.++.+||.+||+.||.+|||+.|+++|.+.
T Consensus       309 ~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f  340 (420)
T 1j1b_A          309 TPPEAIALCSRLLEYTPTARLTPLEACAHSFF  340 (420)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             CCHHHHHHHHHhccCChhHCCCHHHHhCCHhh
Confidence            34679999999999999999999999988553


No 226
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=4.1e-40  Score=291.18  Aligned_cols=225  Identities=19%  Similarity=0.210  Sum_probs=177.1

Q ss_pred             CceEEEEeeccc-CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-----CcceEEEEeCCCCCHHHHHhhcCCCCCCC
Q 044846            2 EELWLLKKSKSV-HESNVEQFINEVVILSQINHRNVVKILGCCLET-----EVPLLVYEFIPNGSLYQYIHEQTDDQLPI   75 (290)
Q Consensus         2 ~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~   75 (290)
                      |+.||||+++.. .......+.+|+++++.++||||+++++++...     ...++||||+. |+|.+++...     .+
T Consensus        36 ~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-----~~  109 (353)
T 2b9h_A           36 GEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVISTQ-----ML  109 (353)
T ss_dssp             TEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCS-EEHHHHHHHC-----CC
T ss_pred             CcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEeccC-ccHHHHHhhc-----CC
Confidence            678999999743 344566788999999999999999999988764     67899999995 6999999763     48


Q ss_pred             CHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCce---------eeccceecc
Q 044846           76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH---------LTTQVKVTF  146 (290)
Q Consensus        76 ~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~---------~~~~~~g~~  146 (290)
                      ++..+..++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++.........         ......||+
T Consensus       110 ~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~  186 (353)
T 2b9h_A          110 SDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATR  186 (353)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccc
Confidence            99999999999999999999999   999999999999999999999999998754321111         112346799


Q ss_pred             cccCcccccc-CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHH-----------------------hh-----
Q 044846          147 GYVDPKYFRS-SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAY-----------------------FS-----  197 (290)
Q Consensus       147 ~y~aPE~~~~-~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~-----------------------~~-----  197 (290)
                      .|+|||++.+ ..++.++|||||||++|+|++|.+||.............                       ..     
T Consensus       187 ~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (353)
T 2b9h_A          187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMY  266 (353)
T ss_dssp             GGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCC
T ss_pred             cccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCC
Confidence            9999998765 678899999999999999999999886543221110000                       00     


Q ss_pred             -----hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 044846          198 -----KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAG  235 (290)
Q Consensus       198 -----~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~  235 (290)
                           .......+..+.+||.+||+.||.+|||+.|++++.+-
T Consensus       267 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~  309 (353)
T 2b9h_A          267 PAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL  309 (353)
T ss_dssp             CCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             CCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccc
Confidence                 00011345678899999999999999999999987553


No 227
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=4.3e-40  Score=287.99  Aligned_cols=225  Identities=22%  Similarity=0.251  Sum_probs=174.6

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhc-CCCceeeEEeEEEe------CCcceEEEEeCCCCCHHHHHhhcCCCCCC
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQI-NHRNVVKILGCCLE------TEVPLLVYEFIPNGSLYQYIHEQTDDQLP   74 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~   74 (290)
                      |+.||+|++.... ...+.+.+|+.+++.+ +||||+++++++..      .+..++||||+.+|+|.+++.....  ..
T Consensus        49 ~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~  125 (326)
T 2x7f_A           49 GQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG--NT  125 (326)
T ss_dssp             CCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGG--GC
T ss_pred             CCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhccc--CC
Confidence            6789999987533 3456788999999999 89999999999987      4678999999999999999987532  25


Q ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCcccc
Q 044846           75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYF  154 (290)
Q Consensus        75 ~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~  154 (290)
                      +++..++.++.||+.||.|||+++   |+||||||+||+++.++.+||+|||++...... ........|++.|+|||++
T Consensus       126 ~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~  201 (326)
T 2x7f_A          126 LKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT-VGRRNTFIGTPYWMAPEVI  201 (326)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCTTTC--------------CCGGGCCHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEEEeeCcCceecCcC-ccccccccCCccccChhhh
Confidence            889999999999999999999999   999999999999999999999999997643321 1122345689999999998


Q ss_pred             c-----cCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh----hhhHHHHHHHHHHHHHhhccCCCCCCC
Q 044846          155 R-----SSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK----EAEKEEVITFAMVAKRCLNLNGKKQPT  225 (290)
Q Consensus       155 ~-----~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~dp~~Rps  225 (290)
                      .     +..++.++|||||||++|+|++|..|+........ .......    ......+..+.+||.+||..||.+|||
T Consensus       202 ~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps  280 (326)
T 2x7f_A          202 ACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA-LFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPA  280 (326)
T ss_dssp             C--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCC
T ss_pred             ccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH-HHHhhcCccccCCccccCHHHHHHHHHHhccChhhCCC
Confidence            7     45688999999999999999999988854332221 1111111    111234567999999999999999999


Q ss_pred             HHHHHHHHH
Q 044846          226 MKEVTLELA  234 (290)
Q Consensus       226 ~~el~~~l~  234 (290)
                      +.+++++..
T Consensus       281 ~~~ll~hp~  289 (326)
T 2x7f_A          281 TEQLMKHPF  289 (326)
T ss_dssp             HHHHHTSHH
T ss_pred             HHHHhhChH
Confidence            999998754


No 228
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=1e-39  Score=282.84  Aligned_cols=227  Identities=16%  Similarity=0.119  Sum_probs=177.8

Q ss_pred             CceEEEEeecccC----chhHHHHHHHHHHHHhcCCCceeeEEeEEE--eCCcceEEEEeCCCCCHHHHHhhcCCCCCCC
Q 044846            2 EELWLLKKSKSVH----ESNVEQFINEVVILSQINHRNVVKILGCCL--ETEVPLLVYEFIPNGSLYQYIHEQTDDQLPI   75 (290)
Q Consensus         2 ~~~~avK~~~~~~----~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~--~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~   75 (290)
                      |+.||+|+++...    ....+.+.+|+++++.++||||+++++++.  ..+..++||||+.++ |.+++......  .+
T Consensus        30 ~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~--~~  106 (305)
T 2wtk_C           30 LCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEK--RF  106 (305)
T ss_dssp             CCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECCSEE-HHHHHHHSTTC--SC
T ss_pred             CcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCccc--cc
Confidence            5789999986432    345678999999999999999999999984  456789999999765 88888764432  58


Q ss_pred             CHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccC-CceeeccceecccccCcccc
Q 044846           76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAID-RTHLTTQVKVTFGYVDPKYF  154 (290)
Q Consensus        76 ~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~g~~~y~aPE~~  154 (290)
                      ++..+..++.||+.||.|||+++   |+||||||+||+++.++.+||+|||++...... .........|+..|+|||++
T Consensus       107 ~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  183 (305)
T 2wtk_C          107 PVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIA  183 (305)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhc
Confidence            99999999999999999999999   999999999999999999999999998654321 12223445689999999998


Q ss_pred             ccCC--CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh--hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHH
Q 044846          155 RSSQ--FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS--KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVT  230 (290)
Q Consensus       155 ~~~~--~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~  230 (290)
                      .+..  ++.++||||||+++|+|++|..|+........ ......  ...+...+..+.++|.+||+.||.+|||+.|++
T Consensus       184 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~i~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll  262 (305)
T 2wtk_C          184 NGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKL-FENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIR  262 (305)
T ss_dssp             TCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             cCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHH-HHHHhcCCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHh
Confidence            7654  36799999999999999999998864432211 111111  111223456789999999999999999999999


Q ss_pred             HHHHh
Q 044846          231 LELAG  235 (290)
Q Consensus       231 ~~l~~  235 (290)
                      ++.+.
T Consensus       263 ~~~~~  267 (305)
T 2wtk_C          263 QHSWF  267 (305)
T ss_dssp             HSHHH
T ss_pred             cCccc
Confidence            88654


No 229
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=8.8e-40  Score=289.80  Aligned_cols=227  Identities=17%  Similarity=0.150  Sum_probs=175.3

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCc-------ceEEEEeCCCCCHHHHHhhcCCCCCC
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEV-------PLLVYEFIPNGSLYQYIHEQTDDQLP   74 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~-------~~lv~e~~~~g~L~~~l~~~~~~~~~   74 (290)
                      |+.||||++... ......+.+|++.+..++||||++++++|...+.       .++||||+.+ +|...+.........
T Consensus        48 ~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~  125 (360)
T 3e3p_A           48 GMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVA  125 (360)
T ss_dssp             CCEEEEEEEECC-TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCC
T ss_pred             CCEEEEEEEecC-ccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecccc-cHHHHHHHHhhcccC
Confidence            678999998643 2334456788889999999999999999976443       7899999965 676666543333346


Q ss_pred             CCHHHHHHHHHHHHHHHHHHh--hCCCCCeEeccCCCCceEecc-CCcEEEeccccccccccCCceeeccceecccccCc
Q 044846           75 ITWEMRLRITVEVSRVLSYLH--SVASIPIYHLDIKSANILLVD-KYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDP  151 (290)
Q Consensus        75 ~~~~~~~~~~~~i~~~l~ylH--~~~~~~iiHrdlkp~Nil~~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aP  151 (290)
                      +++..+..++.|++.||.|||  +.+   |+||||||+|||++. ++.+||+|||+++.....  .......||+.|+||
T Consensus       126 ~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aP  200 (360)
T 3e3p_A          126 PPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPS--EPNVAYICSRYYRAP  200 (360)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTT--SCCCSTTSCGGGCCH
T ss_pred             CCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCcEEEeeCCCceecCCC--CCcccccCCcceeCH
Confidence            889999999999999999999  888   999999999999996 899999999998654322  223345679999999


Q ss_pred             cccccCC-CCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh---h-----------------------------
Q 044846          152 KYFRSSQ-FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS---K-----------------------------  198 (290)
Q Consensus       152 E~~~~~~-~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~---~-----------------------------  198 (290)
                      |++.+.. ++.++|||||||++|+|++|.+||......... .....   .                             
T Consensus       201 E~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (360)
T 3e3p_A          201 ELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQL-HEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNV  279 (360)
T ss_dssp             HHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHH
T ss_pred             HHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHH-HHHHHHcCCCCHHHHHhcccchhhccccccccCCcccc
Confidence            9987654 899999999999999999999988654322111 11100   0                             


Q ss_pred             --hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 044846          199 --EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAGI  236 (290)
Q Consensus       199 --~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~  236 (290)
                        ......+..+.+||.+||+.||.+|||+.|+++|.+--
T Consensus       280 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~  319 (360)
T 3e3p_A          280 FSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFD  319 (360)
T ss_dssp             TTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGG
T ss_pred             cchhhccccHHHHHHHHHHhccCccccCCHHHHhcCcccc
Confidence              00011356799999999999999999999999885543


No 230
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=2e-39  Score=279.04  Aligned_cols=223  Identities=21%  Similarity=0.236  Sum_probs=181.3

Q ss_pred             CceEEEEeeccc--CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKSV--HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.||+|++...  .....+.+.+|+++++.++||||+++++++...+..++||||+++++|.+++....    .+++..
T Consensus        47 ~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~  122 (287)
T 2wei_A           47 QQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK----RFSEHD  122 (287)
T ss_dssp             CCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS----SCCHHH
T ss_pred             CcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcC----CCCHHH
Confidence            678999998642  34457789999999999999999999999999999999999999999999997765    589999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccC---CcEEEeccccccccccCCceeeccceecccccCcccccc
Q 044846           80 RLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDK---YQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRS  156 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~  156 (290)
                      ++.++.||+.||.|||+++   ++||||||+||+++.+   +.+||+|||++......  .......+++.|+|||++.+
T Consensus       123 ~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~  197 (287)
T 2wei_A          123 AARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRIGTAYYIAPEVLRG  197 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC--SSCSCHHHHHTTCCHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcceeecCC--CccccccCcccccChHHhcC
Confidence            9999999999999999999   9999999999999754   46999999987643322  12233457889999999875


Q ss_pred             CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh------hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHH
Q 044846          157 SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS------KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVT  230 (290)
Q Consensus       157 ~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~  230 (290)
                      . ++.++||||||+++|+|++|.+|+........ ......      .......+..+.++|.+||+.||++|||+.|++
T Consensus       198 ~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell  275 (287)
T 2wei_A          198 T-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-LKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCL  275 (287)
T ss_dssp             C-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             C-CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHh
Confidence            4 88999999999999999999998865432211 111111      111223466799999999999999999999999


Q ss_pred             HHHHh
Q 044846          231 LELAG  235 (290)
Q Consensus       231 ~~l~~  235 (290)
                      ++.+-
T Consensus       276 ~hp~~  280 (287)
T 2wei_A          276 EHPWI  280 (287)
T ss_dssp             HSHHH
T ss_pred             cCHHH
Confidence            87543


No 231
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=7.8e-40  Score=297.31  Aligned_cols=222  Identities=21%  Similarity=0.221  Sum_probs=167.1

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      |+.||||++......   .+.+|+++|+.+ +|||||++++++......|||||||. |+|.+++.....   .+....+
T Consensus        48 ~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~~l~~~~~---~~~~~~~  120 (432)
T 3p23_A           48 NRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDF---AHLGLEP  120 (432)
T ss_dssp             SSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHSSSC---CCCSSCH
T ss_pred             CeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHHHHHHhcCC---CccchhH
Confidence            678999998654333   356899999999 89999999999999999999999995 699999986543   2444456


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEecc-----CCcEEEeccccccccccCCc--eeeccceecccccCccc
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD-----KYQAKISDFRTFKSRAIDRT--HLTTQVKVTFGYVDPKY  153 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~-----~~~~kl~dfg~~~~~~~~~~--~~~~~~~g~~~y~aPE~  153 (290)
                      ..++.||+.||.|||+++   |+||||||+|||++.     ...+||+|||+++.......  .......||+.|+|||+
T Consensus       121 ~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~  197 (432)
T 3p23_A          121 ITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEM  197 (432)
T ss_dssp             HHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGG
T ss_pred             HHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhh
Confidence            789999999999999999   999999999999953     23578999999875443221  12344678999999999


Q ss_pred             cc---cCCCCCcccchhhHHHHHHHhc-CCCCcccchhhhhhhHHHh----hhhhhHHHHHHHHHHHHHhhccCCCCCCC
Q 044846          154 FR---SSQFTEKSDVYSFSVVLVELNW-TKPIHLVDVEENRSLAAYF----SKEAEKEEVITFAMVAKRCLNLNGKKQPT  225 (290)
Q Consensus       154 ~~---~~~~~~~~DiwS~G~il~~l~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~cl~~dp~~Rps  225 (290)
                      +.   ...++.++|||||||++|+|++ |..|+..............    ........+..+.+||.+||+.||.+|||
T Consensus       198 l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps  277 (432)
T 3p23_A          198 LSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPS  277 (432)
T ss_dssp             TSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCC
T ss_pred             hhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCC
Confidence            97   4567789999999999999999 7766643322221111100    01112344566889999999999999999


Q ss_pred             HHHHHHHH
Q 044846          226 MKEVTLEL  233 (290)
Q Consensus       226 ~~el~~~l  233 (290)
                      +.|+++|.
T Consensus       278 ~~evl~hp  285 (432)
T 3p23_A          278 AKHVLKHP  285 (432)
T ss_dssp             HHHHHTST
T ss_pred             HHHHHhCc
Confidence            99999763


No 232
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=3.8e-39  Score=288.44  Aligned_cols=222  Identities=19%  Similarity=0.244  Sum_probs=176.5

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcC-CC-----ceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCC
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQIN-HR-----NVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPI   75 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~-Hp-----niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~   75 (290)
                      |+.||||+++.. ......+..|+.+++.++ |+     +|+++++++...+..++||||+. |+|.+++......  .+
T Consensus        79 ~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~--~~  154 (382)
T 2vx3_A           79 QEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLS-YNLYDLLRNTNFR--GV  154 (382)
T ss_dssp             TEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCC-CBHHHHHHHTTTS--CC
T ss_pred             CcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCC-CCHHHHHhhcCcC--CC
Confidence            578999999743 344667888999999884 55     49999999999999999999995 6999999876432  58


Q ss_pred             CHHHHHHHHHHHHHHHHHHhh--CCCCCeEeccCCCCceEec--cCCcEEEeccccccccccCCceeeccceecccccCc
Q 044846           76 TWEMRLRITVEVSRVLSYLHS--VASIPIYHLDIKSANILLV--DKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDP  151 (290)
Q Consensus        76 ~~~~~~~~~~~i~~~l~ylH~--~~~~~iiHrdlkp~Nil~~--~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aP  151 (290)
                      ++..+..++.|++.||.|||.  .+   |+||||||+|||++  .++.+||+|||+++....    ......||+.|+||
T Consensus       155 ~~~~~~~i~~qi~~al~~lH~~~~~---ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aP  227 (382)
T 2vx3_A          155 SLNLTRKFAQQMCTALLFLATPELS---IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ----RIYQYIQSRFYRSP  227 (382)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTSTTTC---EECCCCSGGGEEESSTTSCCEEECCCTTCEETTC----CCCSSCSCGGGCCH
T ss_pred             CHHHHHHHHHHHHHHHHHhccCCCC---EEcCCCCcccEEEecCCCCcEEEEeccCceeccc----ccccccCCccccCh
Confidence            899999999999999999994  56   99999999999995  477899999999865432    22346789999999


Q ss_pred             cccccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhh--hHHHhhh-------------------------------
Q 044846          152 KYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRS--LAAYFSK-------------------------------  198 (290)
Q Consensus       152 E~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~--~~~~~~~-------------------------------  198 (290)
                      |++.+..++.++|||||||++|+|++|.+||.........  .......                               
T Consensus       228 E~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (382)
T 2vx3_A          228 EVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKD  307 (382)
T ss_dssp             HHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCT
T ss_pred             HHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccc
Confidence            9999999999999999999999999999988654322111  0000000                               


Q ss_pred             --------------------------------hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          199 --------------------------------EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       199 --------------------------------~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                                                      .........+.+||.+||+.||++|||+.|+++|.+
T Consensus       308 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~  375 (382)
T 2vx3_A          308 GKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSF  375 (382)
T ss_dssp             TCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGG
T ss_pred             cccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcc
Confidence                                            001123357899999999999999999999998754


No 233
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=3e-39  Score=285.30  Aligned_cols=221  Identities=17%  Similarity=0.245  Sum_probs=177.9

Q ss_pred             ceEEEEeecccCchhHHHHHHHHHHHHhcCCCc------eeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCC
Q 044846            3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRN------VVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPIT   76 (290)
Q Consensus         3 ~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpn------iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~   76 (290)
                      +.||+|+++.. ....+.+.+|+.+++.++|++      ++.+++++...+..++||||+ +++|.+++......  .++
T Consensus        46 ~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~--~~~  121 (355)
T 2eu9_A           46 SQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQ--PYP  121 (355)
T ss_dssp             EEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTC--CCC
T ss_pred             eEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEecc-CCChHHHHHhccCC--CCC
Confidence            57999999753 445677889999999997766      999999999999999999999 77888888765432  589


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEe-------------------ccCCcEEEeccccccccccCCce
Q 044846           77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILL-------------------VDKYQAKISDFRTFKSRAIDRTH  137 (290)
Q Consensus        77 ~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~-------------------~~~~~~kl~dfg~~~~~~~~~~~  137 (290)
                      +..++.++.||+.||.|||+++   |+||||||+|||+                   +.++.+||+|||+++....    
T Consensus       122 ~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~----  194 (355)
T 2eu9_A          122 LPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE----  194 (355)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTS----
T ss_pred             HHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccc----
Confidence            9999999999999999999999   9999999999999                   6678999999999865322    


Q ss_pred             eeccceecccccCccccccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhh--HHHhhh-----------------
Q 044846          138 LTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSL--AAYFSK-----------------  198 (290)
Q Consensus       138 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~--~~~~~~-----------------  198 (290)
                      ......||+.|+|||++.+..++.++|||||||++|+|++|.+||..........  ......                 
T Consensus       195 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  274 (355)
T 2eu9_A          195 HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYK  274 (355)
T ss_dssp             CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEET
T ss_pred             cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcc
Confidence            2234578999999999999999999999999999999999999886543221111  000000                 


Q ss_pred             --------------------------hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          199 --------------------------EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       199 --------------------------~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                                                ......+..+.+||.+||+.||.+|||+.|++++.+
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~  336 (355)
T 2eu9_A          275 GGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPF  336 (355)
T ss_dssp             TEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGG
T ss_pred             cccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChh
Confidence                                      001123457889999999999999999999987754


No 234
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=8.9e-40  Score=293.77  Aligned_cols=222  Identities=20%  Similarity=0.206  Sum_probs=169.4

Q ss_pred             ceEEEEeecccCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCc------ceEEEEeCCCCCHHHHHhhcCCCCCCCC
Q 044846            3 ELWLLKKSKSVHESNVEQFINEVVILSQINHRNVVKILGCCLETEV------PLLVYEFIPNGSLYQYIHEQTDDQLPIT   76 (290)
Q Consensus         3 ~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~------~~lv~e~~~~g~L~~~l~~~~~~~~~~~   76 (290)
                      ..||+|++......    ..+|+++++.++||||++++++|...+.      .++||||+++ ++...+.........++
T Consensus        65 ~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~  139 (394)
T 4e7w_A           65 DEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMP  139 (394)
T ss_dssp             EEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSE-EHHHHHHHHHHTTSCCC
T ss_pred             CeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCc-cHHHHHHHHHhhcCCCC
Confidence            34888887543221    2379999999999999999999976443      7899999965 55555543222223689


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEec-cCCcEEEeccccccccccCCceeeccceecccccCccccc
Q 044846           77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLV-DKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFR  155 (290)
Q Consensus        77 ~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~  155 (290)
                      +..++.++.||+.||.|||+++   |+||||||+|||++ .++.+||+|||+++......  ......+|+.|+|||++.
T Consensus       140 ~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~--~~~~~~~t~~y~aPE~~~  214 (394)
T 4e7w_A          140 MLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE--PNVSYICSRYYRAPELIF  214 (394)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC--CCCSSCSCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC--CCcccccCcCccCHHHHc
Confidence            9999999999999999999999   99999999999999 79999999999987543222  223456799999999987


Q ss_pred             cC-CCCCcccchhhHHHHHHHhcCCCCcccchhhhhhh--HHHhh----------------------------hhhhHHH
Q 044846          156 SS-QFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSL--AAYFS----------------------------KEAEKEE  204 (290)
Q Consensus       156 ~~-~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~--~~~~~----------------------------~~~~~~~  204 (290)
                      +. .++.++|||||||++|+|++|.+||..........  .....                            .......
T Consensus       215 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (394)
T 4e7w_A          215 GATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRT  294 (394)
T ss_dssp             TCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTC
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccC
Confidence            65 58999999999999999999999887543221111  11000                            0001124


Q ss_pred             HHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          205 VITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       205 ~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      +.++.+||.+||+.||.+|||+.|+++|.+
T Consensus       295 ~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  324 (394)
T 4e7w_A          295 PPDAIDLISRLLEYTPSARLTAIEALCHPF  324 (394)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHHTSGG
T ss_pred             CHHHHHHHHHHhCCChhhCCCHHHHhcChh
Confidence            467999999999999999999999998854


No 235
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=1.5e-39  Score=283.25  Aligned_cols=225  Identities=20%  Similarity=0.272  Sum_probs=175.7

Q ss_pred             CceEEEEeecc--cCchhHHHHHHHHHHHHhcC--CCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCH
Q 044846            2 EELWLLKKSKS--VHESNVEQFINEVVILSQIN--HRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW   77 (290)
Q Consensus         2 ~~~~avK~~~~--~~~~~~~~~~~E~~~l~~l~--Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~   77 (290)
                      |+.||+|++..  ......+.+.+|+++++.++  ||||+++++++...+..++||| +.+++|.+++....    .+++
T Consensus        52 ~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~----~~~~  126 (313)
T 3cek_A           52 KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKK----SIDP  126 (313)
T ss_dssp             CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHCS----SCCH
T ss_pred             CcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCCCcHHHHHHhcC----CCCH
Confidence            57899999864  34456778999999999996  5999999999999999999999 45889999998754    5889


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCce-eeccceecccccCcccccc
Q 044846           78 EMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH-LTTQVKVTFGYVDPKYFRS  156 (290)
Q Consensus        78 ~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~  156 (290)
                      ..++.++.|++.||.|||+++   |+||||||+||+++ ++.+||+|||+++........ ......|++.|+|||++.+
T Consensus       127 ~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  202 (313)
T 3cek_A          127 WERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD  202 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCC--------------CCGGGCCHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEE-CCeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhh
Confidence            999999999999999999999   99999999999996 489999999998754322211 2234568999999999875


Q ss_pred             -----------CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh----hhhHHHHHHHHHHHHHhhccCCC
Q 044846          157 -----------SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK----EAEKEEVITFAMVAKRCLNLNGK  221 (290)
Q Consensus       157 -----------~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~dp~  221 (290)
                                 ..++.++||||||+++|+|++|..|+................    ..+...+..+.++|.+||+.||.
T Consensus       203 ~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~  282 (313)
T 3cek_A          203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPK  282 (313)
T ss_dssp             CC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTT
T ss_pred             cccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcc
Confidence                       467889999999999999999999886443322222222111    11122346789999999999999


Q ss_pred             CCCCHHHHHHHHHh
Q 044846          222 KQPTMKEVTLELAG  235 (290)
Q Consensus       222 ~Rps~~el~~~l~~  235 (290)
                      +|||+.|++++.+.
T Consensus       283 ~Rps~~ell~h~~~  296 (313)
T 3cek_A          283 QRISIPELLAHPYV  296 (313)
T ss_dssp             TSCCHHHHHTSHHH
T ss_pred             cCcCHHHHhcCccc
Confidence            99999999988654


No 236
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=1.6e-39  Score=284.17  Aligned_cols=224  Identities=22%  Similarity=0.315  Sum_probs=176.6

Q ss_pred             CceEEEEeecccC--chhHHHHHHHHHHHHhc---CCCceeeEEeEEE-----eCCcceEEEEeCCCCCHHHHHhhcCCC
Q 044846            2 EELWLLKKSKSVH--ESNVEQFINEVVILSQI---NHRNVVKILGCCL-----ETEVPLLVYEFIPNGSLYQYIHEQTDD   71 (290)
Q Consensus         2 ~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l---~Hpniv~~~~~~~-----~~~~~~lv~e~~~~g~L~~~l~~~~~~   71 (290)
                      |+.||+|+++...  ......+.+|+.+++.+   +||||+++++++.     .....++||||+. |+|.+++......
T Consensus        37 ~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~  115 (326)
T 1blx_A           37 GRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEP  115 (326)
T ss_dssp             TEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCTT
T ss_pred             CEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCC-CCHHHHHHhcccC
Confidence            5679999986422  22233566788877766   8999999999987     4567899999996 6999999875432


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCc
Q 044846           72 QLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDP  151 (290)
Q Consensus        72 ~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aP  151 (290)
                        .+++..++.++.|++.||.|||+++   |+||||||+||+++.++.+||+|||++......  .......|+..|+||
T Consensus       116 --~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~~y~aP  188 (326)
T 1blx_A          116 --GVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSVVVTLWYRAP  188 (326)
T ss_dssp             --CSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSCCSCCCCCGG--GGGCCCCCCCTTCCH
T ss_pred             --CCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEecCcccccccCC--CCccccccccceeCH
Confidence              4889999999999999999999999   999999999999999999999999997643321  222345688999999


Q ss_pred             cccccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh-----------------------------hhhhH
Q 044846          152 KYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS-----------------------------KEAEK  202 (290)
Q Consensus       152 E~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~  202 (290)
                      |++.+..++.++||||||+++|+|++|.+||........ +.....                             .....
T Consensus       189 E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (326)
T 1blx_A          189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ-LGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVT  267 (326)
T ss_dssp             HHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCC
T ss_pred             HHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccc
Confidence            999999999999999999999999999998865432211 111100                             00112


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 044846          203 EEVITFAMVAKRCLNLNGKKQPTMKEVTLELA  234 (290)
Q Consensus       203 ~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~  234 (290)
                      ..+..+.+||.+||+.||.+|||+.|++++.+
T Consensus       268 ~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~  299 (326)
T 1blx_A          268 DIDELGKDLLLKCLTFNPAKRISAYSALSHPY  299 (326)
T ss_dssp             SCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred             cCCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence            24567889999999999999999999997644


No 237
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=1.2e-40  Score=290.46  Aligned_cols=231  Identities=18%  Similarity=0.247  Sum_probs=177.3

Q ss_pred             ceEEEEeeccc--CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            3 ELWLLKKSKSV--HESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         3 ~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      ..+|+|+++..  .....+.+.+|+.+++.++||||+++++++...+..++||||+++++|.+++.....   .+++..+
T Consensus        56 ~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~---~~~~~~~  132 (319)
T 2y4i_B           56 GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKI---VLDVNKT  132 (319)
T ss_dssp             SSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCC---CCCSHHH
T ss_pred             CeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHhcCC---CCCHHHH
Confidence            35888988642  233456688999999999999999999999999999999999999999999976432   5888999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccC----CceeeccceecccccCcccccc
Q 044846           81 LRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAID----RTHLTTQVKVTFGYVDPKYFRS  156 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~g~~~y~aPE~~~~  156 (290)
                      +.++.||+.||.|||+++   |+||||||+||+++ ++.+||+|||++......    .........|++.|+|||++.+
T Consensus       133 ~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~  208 (319)
T 2y4i_B          133 RQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQ  208 (319)
T ss_dssp             HHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSC
T ss_pred             HHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhh
Confidence            999999999999999999   99999999999998 689999999987643211    1112233458899999999875


Q ss_pred             ---------CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh---hhhhHHHHHHHHHHHHHhhccCCCCCC
Q 044846          157 ---------SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS---KEAEKEEVITFAMVAKRCLNLNGKKQP  224 (290)
Q Consensus       157 ---------~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~dp~~Rp  224 (290)
                               ..++.++||||||+++|+|++|..|+...............   .......+..+.+++.+||+.||.+||
T Consensus       209 ~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp  288 (319)
T 2y4i_B          209 LSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERP  288 (319)
T ss_dssp             BSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSC
T ss_pred             ccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCc
Confidence                     34788999999999999999999888654332211111100   001112445789999999999999999


Q ss_pred             CHHHHHHHHHhhHhhh
Q 044846          225 TMKEVTLELAGIRASI  240 (290)
Q Consensus       225 s~~el~~~l~~~~~~~  240 (290)
                      |+.++++.|+.+....
T Consensus       289 t~~~l~~~l~~l~~~~  304 (319)
T 2y4i_B          289 TFTKLMDMLEKLPKRN  304 (319)
T ss_dssp             CHHHHHHHHTTC----
T ss_pred             CHHHHHHHHHHHHHhh
Confidence            9999999999887543


No 238
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=3.5e-39  Score=285.59  Aligned_cols=219  Identities=20%  Similarity=0.218  Sum_probs=173.7

Q ss_pred             CceEEEEeeccc--CchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCc------ceEEEEeCCCCCHHHHHhhcCCCCC
Q 044846            2 EELWLLKKSKSV--HESNVEQFINEVVILSQINHRNVVKILGCCLETEV------PLLVYEFIPNGSLYQYIHEQTDDQL   73 (290)
Q Consensus         2 ~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~------~~lv~e~~~~g~L~~~l~~~~~~~~   73 (290)
                      |+.||||++...  .....+.+.+|+.+++.++||||+++++++.....      .++||||+. |+|.+++..      
T Consensus        49 ~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~------  121 (353)
T 3coi_A           49 GEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMGL------  121 (353)
T ss_dssp             TEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCS-EEGGGTTTS------
T ss_pred             CCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEecccc-CCHHHHhcC------
Confidence            678999998653  34446788999999999999999999999987654      499999996 688877642      


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccc
Q 044846           74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKY  153 (290)
Q Consensus        74 ~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~  153 (290)
                      .+++..+..++.||+.||.|||+++   |+||||||+||+++.++.+||+|||++.....    ......+|+.|+|||+
T Consensus       122 ~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~----~~~~~~~t~~y~aPE~  194 (353)
T 3coi_A          122 KFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADA----EMTGYVVTRWYRAPEV  194 (353)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCTTC------------CCSBCCSCHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccccCCCC----CccccccCcCcCCHHH
Confidence            4889999999999999999999999   99999999999999999999999999765332    1234567899999999


Q ss_pred             ccc-CCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhh---------------------------------hh
Q 044846          154 FRS-SQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFS---------------------------------KE  199 (290)
Q Consensus       154 ~~~-~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~  199 (290)
                      +.+ ..++.++|||||||++|+|++|..||........ +.....                                 ..
T Consensus       195 ~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (353)
T 3coi_A          195 ILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ-LTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQ  273 (353)
T ss_dssp             HSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHH-HHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTT
T ss_pred             HhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHH
Confidence            887 6789999999999999999999998865432211 110000                                 00


Q ss_pred             hhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 044846          200 AEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAG  235 (290)
Q Consensus       200 ~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~  235 (290)
                      .....+..+.+||.+||+.||++|||+.|++++.+-
T Consensus       274 ~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f  309 (353)
T 3coi_A          274 LFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF  309 (353)
T ss_dssp             TCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGG
T ss_pred             hcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcch
Confidence            011335679999999999999999999999987553


No 239
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=5.2e-39  Score=286.06  Aligned_cols=223  Identities=19%  Similarity=0.202  Sum_probs=176.7

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcC-----------CCceeeEEeEEEeCC----cceEEEEeCCCCCHHHHHh
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQIN-----------HRNVVKILGCCLETE----VPLLVYEFIPNGSLYQYIH   66 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~-----------Hpniv~~~~~~~~~~----~~~lv~e~~~~g~L~~~l~   66 (290)
                      |+.||+|+++. +....+.+.+|+++++.++           ||||+++++++...+    ..++|||++ +++|.+++.
T Consensus        44 ~~~vaiK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~  121 (373)
T 1q8y_A           44 NTHVAMKIVRG-DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIK  121 (373)
T ss_dssp             TEEEEEEEECS-CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHH
T ss_pred             CcEEEEEEecC-CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHH
Confidence            67899999874 3445667889999999886           899999999998654    789999999 899999998


Q ss_pred             hcCCCCCCCCHHHHHHHHHHHHHHHHHHhhC-CCCCeEeccCCCCceEecc------CCcEEEeccccccccccCCceee
Q 044846           67 EQTDDQLPITWEMRLRITVEVSRVLSYLHSV-ASIPIYHLDIKSANILLVD------KYQAKISDFRTFKSRAIDRTHLT  139 (290)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~i~~~l~ylH~~-~~~~iiHrdlkp~Nil~~~------~~~~kl~dfg~~~~~~~~~~~~~  139 (290)
                      .....  .+++..+..++.||+.||.|||++ +   |+||||||+|||++.      .+.+||+|||++.....    ..
T Consensus       122 ~~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~----~~  192 (373)
T 1q8y_A          122 KYEHR--GIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE----HY  192 (373)
T ss_dssp             HTTTS--CCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB----CC
T ss_pred             Hhhcc--CCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCCcCcceEEEcccccccccCC----CC
Confidence            75432  588999999999999999999998 8   999999999999953      34799999999865432    12


Q ss_pred             ccceecccccCccccccCCCCCcccchhhHHHHHHHhcCCCCcccchhh-----hhhhHHHh------------------
Q 044846          140 TQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEE-----NRSLAAYF------------------  196 (290)
Q Consensus       140 ~~~~g~~~y~aPE~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~-----~~~~~~~~------------------  196 (290)
                      ....||+.|+|||++.+..++.++|||||||++|+|++|..||......     ...+....                  
T Consensus       193 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  272 (373)
T 1q8y_A          193 TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTR  272 (373)
T ss_dssp             CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHH
T ss_pred             CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhh
Confidence            3356899999999999999999999999999999999999988643210     00000000                  


Q ss_pred             --------------------------hhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 044846          197 --------------------------SKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLELAG  235 (290)
Q Consensus       197 --------------------------~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~  235 (290)
                                                ....+...+..+.+||.+||+.||++|||+.|++++.+-
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f  337 (373)
T 1q8y_A          273 TFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL  337 (373)
T ss_dssp             HHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGG
T ss_pred             hhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhh
Confidence                                      001124566789999999999999999999999987653


No 240
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=1.9e-39  Score=285.63  Aligned_cols=222  Identities=19%  Similarity=0.200  Sum_probs=154.4

Q ss_pred             CceEEEEeecccCchhHHHHHHHHH-HHHhcCCCceeeEEeEEEe----CCcceEEEEeCCCCCHHHHHhhcCCCCCCCC
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVV-ILSQINHRNVVKILGCCLE----TEVPLLVYEFIPNGSLYQYIHEQTDDQLPIT   76 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~-~l~~l~Hpniv~~~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~   76 (290)
                      |+.||+|++... .    ...+|+. .++.+.||||+++++++..    ....++||||+++|+|.+++......  .++
T Consensus        54 ~~~vavK~~~~~-~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~--~l~  126 (336)
T 3fhr_A           54 GQKCALKLLYDS-P----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQ--AFT  126 (336)
T ss_dssp             CCEEEEEEEESS-H----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CC--CCB
T ss_pred             CCEEEEEEecCc-H----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCC--CCC
Confidence            678999998642 1    1223333 4556799999999999976    44589999999999999999875432  589


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEecc---CCcEEEeccccccccccCCceeeccceecccccCccc
Q 044846           77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD---KYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKY  153 (290)
Q Consensus        77 ~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~  153 (290)
                      +..++.++.||+.||.|||+++   |+||||||+||+++.   ++.+||+|||+++....   .......+|+.|+|||+
T Consensus       127 ~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~~~t~~y~aPE~  200 (336)
T 3fhr_A          127 EREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ---NALQTPCYTPYYVAPEV  200 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC----------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEeccccceeccc---cccccCCCCcCccChhh
Confidence            9999999999999999999999   999999999999986   45599999999864332   22234567899999999


Q ss_pred             cccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhh--HHH-------hhhhhhHHHHHHHHHHHHHhhccCCCCCC
Q 044846          154 FRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSL--AAY-------FSKEAEKEEVITFAMVAKRCLNLNGKKQP  224 (290)
Q Consensus       154 ~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  224 (290)
                      +.+..++.++||||||+++|+|++|..||..........  ...       .........+..+.+||.+||+.||.+||
T Consensus       201 ~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  280 (336)
T 3fhr_A          201 LGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERL  280 (336)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSC
T ss_pred             hCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCc
Confidence            988889999999999999999999999886443221100  000       00111123466799999999999999999


Q ss_pred             CHHHHHHHHHhh
Q 044846          225 TMKEVTLELAGI  236 (290)
Q Consensus       225 s~~el~~~l~~~  236 (290)
                      |+.|++++.+-.
T Consensus       281 t~~ell~hp~~~  292 (336)
T 3fhr_A          281 TITQFMNHPWIN  292 (336)
T ss_dssp             CHHHHHHSHHHH
T ss_pred             CHHHHhcCcccc
Confidence            999999987644


No 241
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.2e-39  Score=283.46  Aligned_cols=218  Identities=22%  Similarity=0.244  Sum_probs=173.0

Q ss_pred             CceEEEEeecccCc------hhHHHHHHHHHHHHhc----CCCceeeEEeEEEeCCcceEEEEe-CCCCCHHHHHhhcCC
Q 044846            2 EELWLLKKSKSVHE------SNVEQFINEVVILSQI----NHRNVVKILGCCLETEVPLLVYEF-IPNGSLYQYIHEQTD   70 (290)
Q Consensus         2 ~~~~avK~~~~~~~------~~~~~~~~E~~~l~~l----~Hpniv~~~~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~   70 (290)
                      |+.||+|+++....      .....+.+|+.++.++    +||||+++++++...+..++|||+ +.+++|.+++.... 
T Consensus        56 ~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~-  134 (312)
T 2iwi_A           56 RLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG-  134 (312)
T ss_dssp             CCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHHHC-
T ss_pred             CeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcC-
Confidence            67899999865432      2334566799999998    899999999999999999999999 78999999998765 


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEec-cCCcEEEeccccccccccCCceeeccceeccccc
Q 044846           71 DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLV-DKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYV  149 (290)
Q Consensus        71 ~~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~  149 (290)
                         .+++..++.++.||+.||.|||+++   |+||||||+||+++ .++.+||+|||++......   ......|+..|+
T Consensus       135 ---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~  205 (312)
T 2iwi_A          135 ---PLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE---PYTDFDGTRVYS  205 (312)
T ss_dssp             ---SCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEEECCCSSCEECCSS---CBCCCCSCTTTS
T ss_pred             ---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEEEEEcchhhhcccC---cccccCCccccc
Confidence               5899999999999999999999999   99999999999999 8899999999997654322   223456889999


Q ss_pred             CccccccCCCC-CcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHH
Q 044846          150 DPKYFRSSQFT-EKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKE  228 (290)
Q Consensus       150 aPE~~~~~~~~-~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~e  228 (290)
                      |||++.+..+. .++||||||+++|+|++|..+|........   .  ........+..+.++|.+||+.||++|||+.|
T Consensus       206 aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e  280 (312)
T 2iwi_A          206 PPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILE---A--ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEE  280 (312)
T ss_dssp             CHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHH---T--CCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             CceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhh---h--ccCCcccCCHHHHHHHHHHccCChhhCcCHHH
Confidence            99999877764 489999999999999999998854322111   0  11112234567899999999999999999999


Q ss_pred             HHHHHH
Q 044846          229 VTLELA  234 (290)
Q Consensus       229 l~~~l~  234 (290)
                      ++++.+
T Consensus       281 ~l~~~~  286 (312)
T 2iwi_A          281 ILLDPW  286 (312)
T ss_dssp             HHHSTT
T ss_pred             HhcChh
Confidence            998754


No 242
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=2.1e-39  Score=283.95  Aligned_cols=230  Identities=20%  Similarity=0.204  Sum_probs=160.7

Q ss_pred             CceEEEEeeccc-CchhHHHHHHHHH-HHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcC-CCCCCCCHH
Q 044846            2 EELWLLKKSKSV-HESNVEQFINEVV-ILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQT-DDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~-~~~~~~~~~~E~~-~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~   78 (290)
                      |+.||+|+++.. .......+..|+. +++.++||||+++++++...+..++||||+. |+|.+++.... .....+++.
T Consensus        47 ~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~  125 (327)
T 3aln_A           47 GQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMS-TSFDKFYKYVYSVLDDVIPEE  125 (327)
T ss_dssp             TEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCS-EEHHHHHHHHHHTTCCCCCHH
T ss_pred             CCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecC-CChHHHHHHHHhhhcccCcHH
Confidence            678999999754 3444556777777 6667799999999999999999999999996 58888876421 111258899


Q ss_pred             HHHHHHHHHHHHHHHHhhC-CCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCcccc---
Q 044846           79 MRLRITVEVSRVLSYLHSV-ASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYF---  154 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~-~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~---  154 (290)
                      .+..++.|++.||.|||+. +   |+||||||+||+++.++.+||+|||+++.....  .......|+..|+|||++   
T Consensus       126 ~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~  200 (327)
T 3aln_A          126 ILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS--IAKTRDAGCRPYMAPERIDPS  200 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC---------------------------
T ss_pred             HHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceecccc--cccccCCCCccccCceeeccc
Confidence            9999999999999999998 8   999999999999999999999999997654321  122334688999999998   


Q ss_pred             -ccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh-------hhhHHHHHHHHHHHHHhhccCCCCCCCH
Q 044846          155 -RSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK-------EAEKEEVITFAMVAKRCLNLNGKKQPTM  226 (290)
Q Consensus       155 -~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~cl~~dp~~Rps~  226 (290)
                       .+..++.++||||||+++|+|++|..|+................       ......+..+.+|+.+||+.||.+|||+
T Consensus       201 ~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~  280 (327)
T 3aln_A          201 ASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKY  280 (327)
T ss_dssp             -----CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             cCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCH
Confidence             45668999999999999999999998886432221111111111       0112345679999999999999999999


Q ss_pred             HHHHHHHHhhH
Q 044846          227 KEVTLELAGIR  237 (290)
Q Consensus       227 ~el~~~l~~~~  237 (290)
                      .+++++.+-..
T Consensus       281 ~ell~hp~~~~  291 (327)
T 3aln_A          281 KELLKHPFILM  291 (327)
T ss_dssp             HHHTTSHHHHH
T ss_pred             HHHHhChHHHH
Confidence            99998765544


No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=9.9e-39  Score=278.12  Aligned_cols=225  Identities=19%  Similarity=0.257  Sum_probs=166.2

Q ss_pred             CceEEEEeecccCc-hhHHH-HHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKSVHE-SNVEQ-FINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~~~~-~~~~~-~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.||+|+++.... ....+ +..+..+++.++||||+++++++...+..++||||+ ++.+..+......   .+++..
T Consensus        50 ~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~~~~~---~~~~~~  125 (318)
T 2dyl_A           50 GHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQG---PIPERI  125 (318)
T ss_dssp             CCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEEHHHHHHHHTS---CCCHHH
T ss_pred             CeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CCcHHHHHHHhcc---CCCHHH
Confidence            67899999975432 22333 444455677789999999999999999999999999 5566666554332   589999


Q ss_pred             HHHHHHHHHHHHHHHhhC-CCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccc---
Q 044846           80 RLRITVEVSRVLSYLHSV-ASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFR---  155 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~-~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---  155 (290)
                      +..++.|++.||.|||++ +   |+||||||+||+++.++.+||+|||++......  .......+++.|+|||++.   
T Consensus       126 ~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~  200 (318)
T 2dyl_A          126 LGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVDD--KAKDRSAGCAAYMAPERIDPPD  200 (318)
T ss_dssp             HHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC----------------CCTTCCHHHHC---
T ss_pred             HHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccCC--ccccccCCCccccChhhccccc
Confidence            999999999999999995 8   999999999999999999999999997643321  2223456889999999985   


Q ss_pred             --cCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhhh-----hhHHHHHHHHHHHHHhhccCCCCCCCHHH
Q 044846          156 --SSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSKE-----AEKEEVITFAMVAKRCLNLNGKKQPTMKE  228 (290)
Q Consensus       156 --~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~li~~cl~~dp~~Rps~~e  228 (290)
                        ...++.++||||||+++|+|++|..||.................     .....+..+.++|.+||+.||.+|||+.+
T Consensus       201 ~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  280 (318)
T 2dyl_A          201 PTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNK  280 (318)
T ss_dssp             -----CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHH
T ss_pred             ccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHH
Confidence              45688899999999999999999988864322222222221111     11124567999999999999999999999


Q ss_pred             HHHHHHh
Q 044846          229 VTLELAG  235 (290)
Q Consensus       229 l~~~l~~  235 (290)
                      ++++..-
T Consensus       281 ll~h~~~  287 (318)
T 2dyl_A          281 LLEHSFI  287 (318)
T ss_dssp             HTTSHHH
T ss_pred             HhhCHHH
Confidence            9987543


No 244
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=1.4e-39  Score=284.56  Aligned_cols=218  Identities=20%  Similarity=0.243  Sum_probs=177.4

Q ss_pred             CceEEEEeecccCc------hhHHHHHHHHHHHHhcC--CCceeeEEeEEEeCCcceEEEEeCCC-CCHHHHHhhcCCCC
Q 044846            2 EELWLLKKSKSVHE------SNVEQFINEVVILSQIN--HRNVVKILGCCLETEVPLLVYEFIPN-GSLYQYIHEQTDDQ   72 (290)
Q Consensus         2 ~~~~avK~~~~~~~------~~~~~~~~E~~~l~~l~--Hpniv~~~~~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~   72 (290)
                      |+.||+|+++....      ...+.+.+|+.+++.++  ||||+++++++...+..++|||++.+ ++|.+++....   
T Consensus        68 ~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~---  144 (320)
T 3a99_A           68 NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG---  144 (320)
T ss_dssp             TEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHC---
T ss_pred             CcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccC---
Confidence            67899999864322      12345778999999995  69999999999999999999999975 89999998764   


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEec-cCCcEEEeccccccccccCCceeeccceecccccCc
Q 044846           73 LPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLV-DKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDP  151 (290)
Q Consensus        73 ~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aP  151 (290)
                       .+++..++.++.||+.||.|||+++   |+||||||+|||++ .++.+||+|||+++....   .......||+.|+||
T Consensus       145 -~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~---~~~~~~~gt~~y~aP  217 (320)
T 3a99_A          145 -ALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDFDGTRVYSPP  217 (320)
T ss_dssp             -SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCS---SCBCCCCSCGGGSCH
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEeeCcccccccc---ccccCCCCCccCCCh
Confidence             5899999999999999999999999   99999999999999 789999999999765432   122345689999999


Q ss_pred             cccccCCC-CCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHH
Q 044846          152 KYFRSSQF-TEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVT  230 (290)
Q Consensus       152 E~~~~~~~-~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~  230 (290)
                      |++.+..+ +.++||||||+++|+|++|..||.........     ........+..+.+||.+||+.||++|||+.|++
T Consensus       218 E~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll  292 (320)
T 3a99_A          218 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG-----QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQ  292 (320)
T ss_dssp             HHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHC-----CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhcc-----cccccccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence            99987765 67899999999999999999988543221110     0111123456789999999999999999999998


Q ss_pred             HHHH
Q 044846          231 LELA  234 (290)
Q Consensus       231 ~~l~  234 (290)
                      ++.+
T Consensus       293 ~hp~  296 (320)
T 3a99_A          293 NHPW  296 (320)
T ss_dssp             TSGG
T ss_pred             cCHh
Confidence            7654


No 245
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=7.2e-38  Score=299.61  Aligned_cols=216  Identities=19%  Similarity=0.261  Sum_probs=171.5

Q ss_pred             CceEEEEeecc-cCchhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCc-----ceEEEEeCCCCCHHHHHhhcCCCCCCC
Q 044846            2 EELWLLKKSKS-VHESNVEQFINEVVILSQINHRNVVKILGCCLETEV-----PLLVYEFIPNGSLYQYIHEQTDDQLPI   75 (290)
Q Consensus         2 ~~~~avK~~~~-~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~-----~~lv~e~~~~g~L~~~l~~~~~~~~~~   75 (290)
                      |+.||||++.. ......+.+.+|+++++.++||||+++++++...+.     .||||||++|++|.+++..      .+
T Consensus       106 ~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~------~l  179 (681)
T 2pzi_A          106 GRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ------KL  179 (681)
T ss_dssp             TEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C------CC
T ss_pred             CcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC------CC
Confidence            57899998864 334556788999999999999999999999988765     6999999999999987753      48


Q ss_pred             CHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccc
Q 044846           76 TWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFR  155 (290)
Q Consensus        76 ~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~  155 (290)
                      ++..++.++.||+.||.|||+++   |+||||||+|||++.+ .+||+|||+++.....     ....||+.|+|||++.
T Consensus       180 ~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~-----~~~~gt~~y~aPE~~~  250 (681)
T 2pzi_A          180 PVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF-----GYLYGTPGFQAPEIVR  250 (681)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEETTCC-----SCCCCCTTTSCTTHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchhcccC-----CccCCCccccCHHHHc
Confidence            89999999999999999999999   9999999999999875 8999999998654322     3456899999999987


Q ss_pred             cCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhhhhhHHHHHHHHHHHHHhhccCCCCCCC-HHHHHHHHH
Q 044846          156 SSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSKEAEKEEVITFAMVAKRCLNLNGKKQPT-MKEVTLELA  234 (290)
Q Consensus       156 ~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps-~~el~~~l~  234 (290)
                      +. ++.++|||||||++|+|++|.+++........     .........+..+.+||.+||+.||.+||+ ++++...|.
T Consensus       251 ~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~  324 (681)
T 2pzi_A          251 TG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL-----PEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT  324 (681)
T ss_dssp             HC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC-----CTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             CC-CCCceehhhhHHHHHHHHhCCCCCcccccccc-----cccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence            65 48899999999999999999887653221110     011122234567899999999999999996 566666666


Q ss_pred             hhHh
Q 044846          235 GIRA  238 (290)
Q Consensus       235 ~~~~  238 (290)
                      .+..
T Consensus       325 ~~~~  328 (681)
T 2pzi_A          325 GVLR  328 (681)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5543


No 246
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=3.9e-38  Score=296.68  Aligned_cols=224  Identities=21%  Similarity=0.239  Sum_probs=176.7

Q ss_pred             CceEEEEeecc-cCchhHHHHHHHHHHHHhcCCCceeeEEeEEEe------CCcceEEEEeCCCCCHHHHHhhcCCCCCC
Q 044846            2 EELWLLKKSKS-VHESNVEQFINEVVILSQINHRNVVKILGCCLE------TEVPLLVYEFIPNGSLYQYIHEQTDDQLP   74 (290)
Q Consensus         2 ~~~~avK~~~~-~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~   74 (290)
                      |+.||+|+++. ......+.+.+|+++++.++||||+++++++..      .+..++|||||++|+|.+++...... ..
T Consensus        39 g~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~-~~  117 (676)
T 3qa8_A           39 GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENC-CG  117 (676)
T ss_dssp             TCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCT-TC
T ss_pred             CcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccC-CC
Confidence            67899999875 345567789999999999999999999998765      67789999999999999999875432 25


Q ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCc---EEEeccccccccccCCceeeccceecccccCc
Q 044846           75 ITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQ---AKISDFRTFKSRAIDRTHLTTQVKVTFGYVDP  151 (290)
Q Consensus        75 ~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~---~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aP  151 (290)
                      +++..++.++.|++.||.|||+.+   |+||||||+||+++.++.   +||+|||++......  .......|++.|+||
T Consensus       118 lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~--~~~~~~~gt~~Y~AP  192 (676)
T 3qa8_A          118 LKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG--ELCTEFVGTLQYLAP  192 (676)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSC--CCCCCCCSCCTTCSS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEcccccccccccc--cccccccCCcccCCh
Confidence            888899999999999999999999   999999999999997665   899999998654322  223446789999999


Q ss_pred             cccccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhh-------------hHHHh------------hhhhhHHHHH
Q 044846          152 KYFRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRS-------------LAAYF------------SKEAEKEEVI  206 (290)
Q Consensus       152 E~~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~-------------~~~~~------------~~~~~~~~~~  206 (290)
                      |++.+..++.++||||||+++|+|++|..||.........             .....            ........+.
T Consensus       193 E~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~  272 (676)
T 3qa8_A          193 ELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAG  272 (676)
T ss_dssp             CSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHH
T ss_pred             HHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhH
Confidence            9999999999999999999999999999888543111000             00000            0011223567


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHH
Q 044846          207 TFAMVAKRCLNLNGKKQPTMKEVTL  231 (290)
Q Consensus       207 ~~~~li~~cl~~dp~~Rps~~el~~  231 (290)
                      .+.++|.+||..||++|||+.+++.
T Consensus       273 ~L~dLI~~mL~~DP~kRPTa~elL~  297 (676)
T 3qa8_A          273 KLERWLQCMLMWHQRQRGTDPQNPN  297 (676)
T ss_dssp             HHHHHHHHHSCSSCC---CCTTCCC
T ss_pred             HHHHHHHHHccCCHhhCcCHHHHhc
Confidence            8999999999999999999988653


No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=5.5e-37  Score=264.09  Aligned_cols=200  Identities=13%  Similarity=0.071  Sum_probs=161.9

Q ss_pred             CceEEEEeecccC---chhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHH
Q 044846            2 EELWLLKKSKSVH---ESNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWE   78 (290)
Q Consensus         2 ~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   78 (290)
                      |+.||+|+++...   ....+.+.+|+.++..++||||+++++++...+..|+||||++|++|.+++...      ....
T Consensus        56 ~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~------~~~~  129 (286)
T 3uqc_A           56 DRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTS------PSPV  129 (286)
T ss_dssp             TEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHTTC------CCHH
T ss_pred             CceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCCCHHHHHhcC------CChH
Confidence            6789999997533   344678999999999999999999999999999999999999999999999642      3455


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccCccccccCC
Q 044846           79 MRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQ  158 (290)
Q Consensus        79 ~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  158 (290)
                      .+..++.|++.||.|||+++   |+||||||+|||++.++.+||++++.                     ++       .
T Consensus       130 ~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~~---------------------~~-------~  178 (286)
T 3uqc_A          130 GAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPAT---------------------MP-------D  178 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCCC---------------------CT-------T
T ss_pred             HHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEeccc---------------------cC-------C
Confidence            67889999999999999999   99999999999999999999986543                     22       3


Q ss_pred             CCCcccchhhHHHHHHHhcCCCCcccchhhhhh------hHHHhh--hhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHH
Q 044846          159 FTEKSDVYSFSVVLVELNWTKPIHLVDVEENRS------LAAYFS--KEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVT  230 (290)
Q Consensus       159 ~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~------~~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~  230 (290)
                      ++.++|||||||++|+|++|..||.........      ......  .......+..+.+||.+||+.||++| |+.|++
T Consensus       179 ~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~  257 (286)
T 3uqc_A          179 ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLL  257 (286)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHH
Confidence            688999999999999999999888654321100      000000  11112345679999999999999999 999999


Q ss_pred             HHHHhhHhh
Q 044846          231 LELAGIRAS  239 (290)
Q Consensus       231 ~~l~~~~~~  239 (290)
                      +.|+.+...
T Consensus       258 ~~L~~~~~~  266 (286)
T 3uqc_A          258 NLMQQATAV  266 (286)
T ss_dssp             HHHHHHHC-
T ss_pred             HHHHHHhcc
Confidence            999988654


No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=5.7e-37  Score=265.39  Aligned_cols=203  Identities=21%  Similarity=0.280  Sum_probs=160.5

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHH-hcCCCceeeEEeEEEe----CCcceEEEEeCCCCCHHHHHhhcCCCCCCCC
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILS-QINHRNVVKILGCCLE----TEVPLLVYEFIPNGSLYQYIHEQTDDQLPIT   76 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~-~l~Hpniv~~~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~   76 (290)
                      |+.||+|+++.     ...+.+|+.++. .++||||+++++++..    ....++||||+++|+|.+++......  .++
T Consensus        43 ~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~  115 (299)
T 3m2w_A           43 QEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ--AFT  115 (299)
T ss_dssp             CCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTC--CCB
T ss_pred             CcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCC--CCC
Confidence            67899999864     235678999884 4599999999999987    67889999999999999999875432  589


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEecc---CCcEEEeccccccccccCCceeeccceecccccCccc
Q 044846           77 WEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVD---KYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKY  153 (290)
Q Consensus        77 ~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~  153 (290)
                      +..++.++.|++.||.|||+++   |+||||||+||+++.   ++.+||+|||++....                     
T Consensus       116 ~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~---------------------  171 (299)
T 3m2w_A          116 EREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---------------------  171 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECT---------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEeccccccccc---------------------
Confidence            9999999999999999999999   999999999999998   7889999999864321                     


Q ss_pred             cccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhh--hHHH-------hhhhhhHHHHHHHHHHHHHhhccCCCCCC
Q 044846          154 FRSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRS--LAAY-------FSKEAEKEEVITFAMVAKRCLNLNGKKQP  224 (290)
Q Consensus       154 ~~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  224 (290)
                        +..++.++|||||||++|+|++|..||.........  ....       .........+..+.+|+.+||+.||.+||
T Consensus       172 --~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rp  249 (299)
T 3m2w_A          172 --GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM  249 (299)
T ss_dssp             --TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSC
T ss_pred             --cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCC
Confidence              234677899999999999999999988543321110  0000       00111123467799999999999999999


Q ss_pred             CHHHHHHHHHhhH
Q 044846          225 TMKEVTLELAGIR  237 (290)
Q Consensus       225 s~~el~~~l~~~~  237 (290)
                      |+.|++++.+-..
T Consensus       250 s~~e~l~hp~~~~  262 (299)
T 3m2w_A          250 TITEFMNHPWIMQ  262 (299)
T ss_dssp             CHHHHHTSHHHHT
T ss_pred             CHHHHhcChhhcc
Confidence            9999998866443


No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=1.5e-37  Score=280.85  Aligned_cols=219  Identities=13%  Similarity=0.160  Sum_probs=160.8

Q ss_pred             CceEEEEeecccC---chhHHHHHHHHHHHHhcCC-Cceee---------------------EEeEEEe-----CCcceE
Q 044846            2 EELWLLKKSKSVH---ESNVEQFINEVVILSQINH-RNVVK---------------------ILGCCLE-----TEVPLL   51 (290)
Q Consensus         2 ~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~H-pniv~---------------------~~~~~~~-----~~~~~l   51 (290)
                      |+.||||+++...   ....+.+.+|+.+++.+.| +|...                     +...+..     ....++
T Consensus       103 g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (413)
T 3dzo_A          103 GESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFF  182 (413)
T ss_dssp             CCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC---------------CCSEEE
T ss_pred             CCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCCccccccCCCccccccceEE
Confidence            7889999987332   2336789999999999977 22111                     1111111     123567


Q ss_pred             EEEeCCCCCHHHHHhhc---CCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccc
Q 044846           52 VYEFIPNGSLYQYIHEQ---TDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTF  128 (290)
Q Consensus        52 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~  128 (290)
                      +|+++ +++|.+++...   ......+++..++.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++
T Consensus       183 ~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---iiHrDiKp~NILl~~~~~~kL~DFG~a  258 (413)
T 3dzo_A          183 LYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRGGVFLTGFEHL  258 (413)
T ss_dssp             EEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCGGGC
T ss_pred             Eeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcccceEEEecCCeEEEEeccce
Confidence            77776 78999998522   112225778889999999999999999999   999999999999999999999999997


Q ss_pred             cccccCCceeeccceecccccCcccc----------ccCCCCCcccchhhHHHHHHHhcCCCCcccchhhhhhhHHHhhh
Q 044846          129 KSRAIDRTHLTTQVKVTFGYVDPKYF----------RSSQFTEKSDVYSFSVVLVELNWTKPIHLVDVEENRSLAAYFSK  198 (290)
Q Consensus       129 ~~~~~~~~~~~~~~~g~~~y~aPE~~----------~~~~~~~~~DiwS~G~il~~l~~~~~~~~~~~~~~~~~~~~~~~  198 (290)
                      +....    ......| +.|+|||++          ....++.++|||||||++|+|++|..||........ .......
T Consensus       259 ~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~-~~~~~~~  332 (413)
T 3dzo_A          259 VRDGA----SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGG-SEWIFRS  332 (413)
T ss_dssp             EETTE----EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSC-SGGGGSS
T ss_pred             eecCC----ccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhh-HHHHHhh
Confidence            65332    1344566 899999999          555688899999999999999999998865432211 1111111


Q ss_pred             hhhHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 044846          199 EAEKEEVITFAMVAKRCLNLNGKKQPTMKEVTLE  232 (290)
Q Consensus       199 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~  232 (290)
                        ....+..+.+||.+||+.||++|||+.+++++
T Consensus       333 --~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~  364 (413)
T 3dzo_A          333 --CKNIPQPVRALLEGFLRYPKEDRLLPLQAMET  364 (413)
T ss_dssp             --CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             --cccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence              11335679999999999999999999999876


No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=2.2e-37  Score=272.30  Aligned_cols=212  Identities=13%  Similarity=0.079  Sum_probs=162.9

Q ss_pred             CceEEEEeecccC--------chhHHHHHHHHHHHHhcC---------CCceeeEEeEEE-----------------e--
Q 044846            2 EELWLLKKSKSVH--------ESNVEQFINEVVILSQIN---------HRNVVKILGCCL-----------------E--   45 (290)
Q Consensus         2 ~~~~avK~~~~~~--------~~~~~~~~~E~~~l~~l~---------Hpniv~~~~~~~-----------------~--   45 (290)
                      |+.||||+++...        ....+.+.+|+.+++.|+         |||||++.+.+.                 .  
T Consensus        43 ~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~  122 (336)
T 2vuw_A           43 HTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTK  122 (336)
T ss_dssp             TEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHT
T ss_pred             CceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecCCCcHHHHHHHHHHhhhc
Confidence            6789999997542        334578999999999886         667766666543                 2  


Q ss_pred             -----------CCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHh-hCCCCCeEeccCCCCceE
Q 044846           46 -----------TEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLH-SVASIPIYHLDIKSANIL  113 (290)
Q Consensus        46 -----------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~ylH-~~~~~~iiHrdlkp~Nil  113 (290)
                                 .+..|||||||++|++.+.+...     .+++..++.++.||+.||.||| +++   |+||||||+|||
T Consensus       123 ~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~-----~~~~~~~~~i~~qi~~aL~~lH~~~~---ivHrDlKp~NIL  194 (336)
T 2vuw_A          123 GSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK-----LSSLATAKSILHQLTASLAVAEASLR---FEHRDLHWGNVL  194 (336)
T ss_dssp             CCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT-----CCCHHHHHHHHHHHHHHHHHHHHHHC---CBCSCCCGGGEE
T ss_pred             cccccCccccccCeEEEEEEecCCCccHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHhCC---EeECCCCHHHEE
Confidence                       67899999999999777766442     4899999999999999999999 899   999999999999


Q ss_pred             eccCC--------------------cEEEeccccccccccCCceeeccceecccccCccccccCCCCCcccchhhHHH-H
Q 044846          114 LVDKY--------------------QAKISDFRTFKSRAIDRTHLTTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVV-L  172 (290)
Q Consensus       114 ~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwS~G~i-l  172 (290)
                      ++.++                    .+||+|||+++....      ....||+.|+|||++.+.. +.++||||+|++ .
T Consensus       195 l~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~------~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~  267 (336)
T 2vuw_A          195 LKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD------GIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKEN  267 (336)
T ss_dssp             EEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET------TEEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHH
T ss_pred             EeccCCcceeeeccCccccccCCCceEEEeeccccEecCC------CcEEEeecccChhhhcCCC-ccceehhhhhCCCC
Confidence            99887                    899999999875432      2357899999999998766 889999998877 6


Q ss_pred             HHHhcCCCCcccchhhhhhhHHHh---------hhhhhHHHHHHHHHHHHHhhccCCCCCCCHHHHH-HHH
Q 044846          173 VELNWTKPIHLVDVEENRSLAAYF---------SKEAEKEEVITFAMVAKRCLNLNGKKQPTMKEVT-LEL  233 (290)
Q Consensus       173 ~~l~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~-~~l  233 (290)
                      ++++.|..|+..............         ........+.++.+||.+||+.|     |+.|++ +|.
T Consensus       268 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp  333 (336)
T 2vuw_A          268 NNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHS  333 (336)
T ss_dssp             TTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCG
T ss_pred             cccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCC
Confidence            667778877743211011111111         12234467788999999999977     999998 664


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=100.00  E-value=5.7e-36  Score=280.15  Aligned_cols=166  Identities=19%  Similarity=0.164  Sum_probs=125.8

Q ss_pred             CceEEEEeeccc----------CchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCC
Q 044846            2 EELWLLKKSKSV----------HESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTD   70 (290)
Q Consensus         2 ~~~~avK~~~~~----------~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~   70 (290)
                      |+.||+|.+...          .+...++|.+|+++|+++ .|+||+++++++.+++..|||||||+||+|.++|.... 
T Consensus       259 g~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~-  337 (569)
T 4azs_A          259 GEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGE-  337 (569)
T ss_dssp             CSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTC-
T ss_pred             cceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCC-
Confidence            678999998532          123456799999999999 79999999999999999999999999999999998765 


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccceecccccC
Q 044846           71 DQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVKVTFGYVD  150 (290)
Q Consensus        71 ~~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~g~~~y~a  150 (290)
                         +++..   .++.||+.||.|+|++|   ||||||||+|||++.+|++||+|||+++...... ....+..||+.|+|
T Consensus       338 ---~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~-~~~~t~vGTp~YmA  407 (569)
T 4azs_A          338 ---EIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC-SWPTNLVQSFFVFV  407 (569)
T ss_dssp             ---CCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC----CCSHHHHHHHHHHH
T ss_pred             ---CCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCCCCC-ccccCceechhhcc
Confidence               56654   47899999999999999   9999999999999999999999999987654322 23345779999999


Q ss_pred             ccccccCCCCCcccchhhHHHHHHHhcCC
Q 044846          151 PKYFRSSQFTEKSDVYSFSVVLVELNWTK  179 (290)
Q Consensus       151 PE~~~~~~~~~~~DiwS~G~il~~l~~~~  179 (290)
                      ||++.+. +..++|+||+|++++++.++.
T Consensus       408 PE~l~g~-~~~~~d~~s~g~~~~~l~~~~  435 (569)
T 4azs_A          408 NELFAEN-KSWNGFWRSAPVHPFNLPQPW  435 (569)
T ss_dssp             HHHC------------------CCCCTTH
T ss_pred             HHHhCCC-CCCcccccccccchhhhcccc
Confidence            9998754 667899999999988875544


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93  E-value=1.9e-26  Score=214.51  Aligned_cols=162  Identities=13%  Similarity=0.134  Sum_probs=129.9

Q ss_pred             CceEEEEeecccCc--------hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCC
Q 044846            2 EELWLLKKSKSVHE--------SNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQL   73 (290)
Q Consensus         2 ~~~~avK~~~~~~~--------~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~   73 (290)
                      ++.+++|+......        ...+++.+|++++++++||||+++..++...+..|||||||++|+|.+++..      
T Consensus       359 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~------  432 (540)
T 3en9_A          359 DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED------  432 (540)
T ss_dssp             SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT------
T ss_pred             CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH------
Confidence            56678887643211        1245689999999999999999766666678888999999999999999875      


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCce------eeccceeccc
Q 044846           74 PITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTH------LTTQVKVTFG  147 (290)
Q Consensus        74 ~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~g~~~  147 (290)
                            +..++.|++.||.|||+++   |+||||||+|||++.  .+||+|||+++........      ......||+.
T Consensus       433 ------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~  501 (540)
T 3en9_A          433 ------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHH  501 (540)
T ss_dssp             ------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCG
T ss_pred             ------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhhhhcCCCC
Confidence                  3478999999999999999   999999999999998  9999999998765432111      1235678999


Q ss_pred             ccCcccccc--CCCCCcccchhhHHHHHHHhcCCC
Q 044846          148 YVDPKYFRS--SQFTEKSDVYSFSVVLVELNWTKP  180 (290)
Q Consensus       148 y~aPE~~~~--~~~~~~~DiwS~G~il~~l~~~~~  180 (290)
                      |+|||++..  ..|+..+|+||.++-..+-+.++.
T Consensus       502 y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~  536 (540)
T 3en9_A          502 EKFDEIWERFLEGYKSVYDRWEIILELMKDVERRA  536 (540)
T ss_dssp             GGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCS
T ss_pred             cCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcc
Confidence            999999987  567888999998887666554443


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.84  E-value=1.7e-21  Score=166.96  Aligned_cols=121  Identities=17%  Similarity=0.087  Sum_probs=96.1

Q ss_pred             CceEEEEeecccCc------------------hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHH
Q 044846            2 EELWLLKKSKSVHE------------------SNVEQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQ   63 (290)
Q Consensus         2 ~~~~avK~~~~~~~------------------~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~   63 (290)
                      |+.||+|+++....                  .....+.+|+++|+.++  | +++.+++.. +..++||||++||+|.+
T Consensus       114 g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~  189 (282)
T 1zar_A          114 FGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYAW-EGNAVLMELIDAKELYR  189 (282)
T ss_dssp             TEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEEE-ETTEEEEECCCCEEGGG
T ss_pred             CCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEec-cceEEEEEecCCCcHHH
Confidence            67899999864322                  13567899999999998  4 666665544 56799999999999988


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCceeeccce
Q 044846           64 YIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHLTTQVK  143 (290)
Q Consensus        64 ~l~~~~~~~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  143 (290)
                       +..          .....++.|++.||.|||+++   |+||||||+|||++ ++.+||+|||+++.             
T Consensus       190 -l~~----------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl~-~~~vkl~DFG~a~~-------------  241 (282)
T 1zar_A          190 -VRV----------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVS-EEGIWIIDFPQSVE-------------  241 (282)
T ss_dssp             -CCC----------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE-TTEEEECCCTTCEE-------------
T ss_pred             -cch----------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEEE-CCcEEEEECCCCeE-------------
Confidence             421          123468999999999999999   99999999999999 99999999999752             


Q ss_pred             ecccccCccccc
Q 044846          144 VTFGYVDPKYFR  155 (290)
Q Consensus       144 g~~~y~aPE~~~  155 (290)
                       +..++|||++.
T Consensus       242 -~~~~~a~e~l~  252 (282)
T 1zar_A          242 -VGEEGWREILE  252 (282)
T ss_dssp             -TTSTTHHHHHH
T ss_pred             -CCCCCHHHHHH
Confidence             33478888874


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.70  E-value=2.8e-17  Score=138.84  Aligned_cols=96  Identities=19%  Similarity=0.141  Sum_probs=75.9

Q ss_pred             HHHHHHHHHHHhcCCCce--eeEEeEEEeCCcceEEEEeCCC-C----CHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHH
Q 044846           19 EQFINEVVILSQINHRNV--VKILGCCLETEVPLLVYEFIPN-G----SLYQYIHEQTDDQLPITWEMRLRITVEVSRVL   91 (290)
Q Consensus        19 ~~~~~E~~~l~~l~Hpni--v~~~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l   91 (290)
                      ..+.+|+.+|..|.|+++  +..++.    +..+|||||+.+ |    +|.++...       .++..+..++.|++.||
T Consensus       115 ~~~~~E~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l  183 (258)
T 1zth_A          115 IWTEKEFRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENV  183 (258)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHH
Confidence            367899999999987754  344432    367899999942 3    77776543       12345678999999999


Q ss_pred             HHHh-hCCCCCeEeccCCCCceEeccCCcEEEeccccccc
Q 044846           92 SYLH-SVASIPIYHLDIKSANILLVDKYQAKISDFRTFKS  130 (290)
Q Consensus        92 ~ylH-~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~  130 (290)
                      .||| +.+   |+||||||+|||++.  .++|+|||++..
T Consensus       184 ~~lH~~~g---ivHrDlkp~NILl~~--~~~liDFG~a~~  218 (258)
T 1zth_A          184 KRLYQEAE---LVHADLSEYNIMYID--KVYFIDMGQAVT  218 (258)
T ss_dssp             HHHHHTSC---EECSSCSTTSEEESS--SEEECCCTTCEE
T ss_pred             HHHHHHCC---EEeCCCCHHHEEEcC--cEEEEECccccc
Confidence            9999 998   999999999999988  899999999754


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.48  E-value=1.2e-14  Score=128.57  Aligned_cols=93  Identities=13%  Similarity=0.155  Sum_probs=65.4

Q ss_pred             HHHHHHHhcCCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCe
Q 044846           23 NEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPI  102 (290)
Q Consensus        23 ~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~i  102 (290)
                      +|...|.+|.+.++. ....+.. ...+|||||+.|++|..+..        .  .....++.|++.+|.|||..+   |
T Consensus       162 kE~~nL~rL~~~gv~-vp~p~~~-~~~~LVME~i~G~~L~~l~~--------~--~~~~~l~~qll~~l~~lH~~g---I  226 (397)
T 4gyi_A          162 KEFAFMKALYEEGFP-VPEPIAQ-SRHTIVMSLVDALPMRQVSS--------V--PDPASLYADLIALILRLAKHG---L  226 (397)
T ss_dssp             HHHHHHHHHHHTTCS-CCCEEEE-ETTEEEEECCSCEEGGGCCC--------C--SCHHHHHHHHHHHHHHHHHTT---E
T ss_pred             HHHHHHHHHHhcCCC-CCeeeec-cCceEEEEecCCccHhhhcc--------c--HHHHHHHHHHHHHHHHHHHCC---C
Confidence            456666666433321 1111111 23479999999888765432        1  123467899999999999999   9


Q ss_pred             EeccCCCCceEeccCC----------cEEEeccccccc
Q 044846          103 YHLDIKSANILLVDKY----------QAKISDFRTFKS  130 (290)
Q Consensus       103 iHrdlkp~Nil~~~~~----------~~kl~dfg~~~~  130 (290)
                      |||||||.|||++.++          .+.|+||+.+..
T Consensus       227 VHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          227 IHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             ECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             cCCCCCHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence            9999999999998776          489999987543


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.29  E-value=6.8e-12  Score=105.62  Aligned_cols=118  Identities=15%  Similarity=0.083  Sum_probs=90.8

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMR   80 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~   80 (290)
                      |+.+++|............+.+|+++++.| .+..++++++++...+..|+|||+++|.+|.+....         ....
T Consensus        37 ~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~---------~~~~  107 (263)
T 3tm0_A           37 NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYED---------EQSP  107 (263)
T ss_dssp             SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCCT---------TTCH
T ss_pred             CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhhccCC---------cccH
Confidence            467889998753222334588999999999 577888999999988899999999999998876321         1123


Q ss_pred             HHHHHHHHHHHHHHhhCC--------------------------------------------------------CCCeEe
Q 044846           81 LRITVEVSRVLSYLHSVA--------------------------------------------------------SIPIYH  104 (290)
Q Consensus        81 ~~~~~~i~~~l~ylH~~~--------------------------------------------------------~~~iiH  104 (290)
                      ..++.+++.+|..||+..                                                        +..++|
T Consensus       108 ~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~H  187 (263)
T 3tm0_A          108 EKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSH  187 (263)
T ss_dssp             HHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEEC
T ss_pred             HHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEEC
Confidence            467889999999999811                                                        123899


Q ss_pred             ccCCCCceEeccCCcEEEeccccc
Q 044846          105 LDIKSANILLVDKYQAKISDFRTF  128 (290)
Q Consensus       105 rdlkp~Nil~~~~~~~kl~dfg~~  128 (290)
                      +|++|.||+++....+.|+||+.+
T Consensus       188 gDl~~~Nil~~~~~~~~lIDwe~a  211 (263)
T 3tm0_A          188 GDLGDSNIFVKDGKVSGFIDLGRS  211 (263)
T ss_dssp             SSCCTTSEEEETTEEEEECCCTTC
T ss_pred             CCCCcCcEEEECCcEEEEEEchhc
Confidence            999999999987655679999874


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.06  E-value=3.6e-10  Score=94.49  Aligned_cols=112  Identities=15%  Similarity=0.193  Sum_probs=82.2

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCCc--eeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHRN--VVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEM   79 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hpn--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~   79 (290)
                      |+.+++|.....   ....+.+|+.+++.+.+.+  ++++++++...+..++||||++|.+|.  ..       ..+   
T Consensus        44 g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~~-------~~~---  108 (264)
T 1nd4_A           44 RPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--SS-------HLA---  108 (264)
T ss_dssp             SCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--TS-------CCC---
T ss_pred             CCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--cC-------cCC---
Confidence            456888887643   2245778999999994333  567888888877889999999998874  21       111   


Q ss_pred             HHHHHHHHHHHHHHHhhCC-------------------------------------------------------CCCeEe
Q 044846           80 RLRITVEVSRVLSYLHSVA-------------------------------------------------------SIPIYH  104 (290)
Q Consensus        80 ~~~~~~~i~~~l~ylH~~~-------------------------------------------------------~~~iiH  104 (290)
                      ...++.+++..|..||...                                                       +..++|
T Consensus       109 ~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~H  188 (264)
T 1nd4_A          109 PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTH  188 (264)
T ss_dssp             HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEEC
T ss_pred             HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEEC
Confidence            1246677888888888643                                                       112999


Q ss_pred             ccCCCCceEeccCCcEEEeccccc
Q 044846          105 LDIKSANILLVDKYQAKISDFRTF  128 (290)
Q Consensus       105 rdlkp~Nil~~~~~~~kl~dfg~~  128 (290)
                      +|++|.||+++.++.+.|+||+.+
T Consensus       189 gDl~~~Nil~~~~~~~~liD~~~a  212 (264)
T 1nd4_A          189 GDACLPNIMVENGRFSGFIDCGRL  212 (264)
T ss_dssp             SSCCGGGEEEETTEEEEECCCTTC
T ss_pred             CCCCCCcEEEECCcEEEEEcchhc
Confidence            999999999987766779999875


No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.00  E-value=1.2e-09  Score=96.19  Aligned_cols=122  Identities=16%  Similarity=0.252  Sum_probs=88.4

Q ss_pred             ceEEEEeec--ccC-chhHHHHHHHHHHHHhcC--CCceeeEEeEEEeC---CcceEEEEeCCCCCHHHHHhhcCCCCCC
Q 044846            3 ELWLLKKSK--SVH-ESNVEQFINEVVILSQIN--HRNVVKILGCCLET---EVPLLVYEFIPNGSLYQYIHEQTDDQLP   74 (290)
Q Consensus         3 ~~~avK~~~--~~~-~~~~~~~~~E~~~l~~l~--Hpniv~~~~~~~~~---~~~~lv~e~~~~g~L~~~l~~~~~~~~~   74 (290)
                      +.+++|+..  ... ......+.+|..+++.|.  +..+++++.++.+.   +..|+||||++|..+.+...      ..
T Consensus        62 ~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~~------~~  135 (359)
T 3dxp_A           62 QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQSL------PG  135 (359)
T ss_dssp             CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCTTC------TT
T ss_pred             ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecCCeecCCCcc------cc
Confidence            456777765  322 122346788999999995  45688889888776   45899999999877643111      13


Q ss_pred             CCHHHHHHHHHHHHHHHHHHhhCC-------------------------------------------------------C
Q 044846           75 ITWEMRLRITVEVSRVLSYLHSVA-------------------------------------------------------S   99 (290)
Q Consensus        75 ~~~~~~~~~~~~i~~~l~ylH~~~-------------------------------------------------------~   99 (290)
                      ++......++.+++..|..||...                                                       +
T Consensus       136 l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  215 (359)
T 3dxp_A          136 MSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADL  215 (359)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSC
T ss_pred             CCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCC
Confidence            677888889999999999999731                                                       2


Q ss_pred             CCeEeccCCCCceEeccCCc--EEEeccccccc
Q 044846          100 IPIYHLDIKSANILLVDKYQ--AKISDFRTFKS  130 (290)
Q Consensus       100 ~~iiHrdlkp~Nil~~~~~~--~kl~dfg~~~~  130 (290)
                      ..++|+|+++.||+++.++.  +.|+||+.+..
T Consensus       216 ~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          216 TSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             CEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             ceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence            34999999999999997753  68999998653


No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.90  E-value=1.9e-09  Score=92.73  Aligned_cols=171  Identities=19%  Similarity=0.244  Sum_probs=105.7

Q ss_pred             ceEEEEeecccCchhHHHHHHHHHHHHhc-CCCc--eeeEEeEEEeCC---cceEEEEeCCCCCHHHHHhhcCCCCCCCC
Q 044846            3 ELWLLKKSKSVHESNVEQFINEVVILSQI-NHRN--VVKILGCCLETE---VPLLVYEFIPNGSLYQYIHEQTDDQLPIT   76 (290)
Q Consensus         3 ~~~avK~~~~~~~~~~~~~~~E~~~l~~l-~Hpn--iv~~~~~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~   76 (290)
                      +.+++|+-..  ......+.+|.++|+.+ .+..  +.+.+......+   ..|+|||+++|.+|......      .++
T Consensus        41 ~~~vlR~~~~--~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l~~~~~~------~l~  112 (304)
T 3sg8_A           41 RDFIFKFPKH--SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLLN------NLP  112 (304)
T ss_dssp             TSEEEEEESS--HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEECCHHHHH------TSC
T ss_pred             CEEEEEecCC--cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeECCccccc------cCC
Confidence            4577887653  24466788999999988 4332  344554443333   35899999999888654331      366


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCC-------------------------------------------------------CCC
Q 044846           77 WEMRLRITVEVSRVLSYLHSVA-------------------------------------------------------SIP  101 (290)
Q Consensus        77 ~~~~~~~~~~i~~~l~ylH~~~-------------------------------------------------------~~~  101 (290)
                      ...+..++.+++..|..||...                                                       ...
T Consensus       113 ~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~  192 (304)
T 3sg8_A          113 KQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPC  192 (304)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCE
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCce
Confidence            6777788888888888888511                                                       123


Q ss_pred             eEeccCCCCceEecc--CCcEEEeccccccccccCCce--eecc-----------ceecccccC-ccccccCCCCCcccc
Q 044846          102 IYHLDIKSANILLVD--KYQAKISDFRTFKSRAIDRTH--LTTQ-----------VKVTFGYVD-PKYFRSSQFTEKSDV  165 (290)
Q Consensus       102 iiHrdlkp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~--~~~~-----------~~g~~~y~a-PE~~~~~~~~~~~Di  165 (290)
                      ++|+|++|.||+++.  ...+.|+||+.+.........  ....           ....+.... |+....  ...-.+.
T Consensus       193 ~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r--~~~~~~~  270 (304)
T 3sg8_A          193 LIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEK--YRMKEKY  270 (304)
T ss_dssp             EECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHH--HHHHHHH
T ss_pred             eEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHH--HHHHHHH
Confidence            899999999999998  456789999876533210000  0000           000000111 111110  0112578


Q ss_pred             hhhHHHHHHHhcCCCCcc
Q 044846          166 YSFSVVLVELNWTKPIHL  183 (290)
Q Consensus       166 wS~G~il~~l~~~~~~~~  183 (290)
                      |++|.++|.+.+|.+++.
T Consensus       271 ~~l~~~~~~~~~g~~~~~  288 (304)
T 3sg8_A          271 WSFEKIIYGKEYGYMDWY  288 (304)
T ss_dssp             HHHHHHHHHHHTTCHHHH
T ss_pred             HHHHHHHHHHHcCCHHHH
Confidence            999999999999887553


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.65  E-value=2.2e-07  Score=80.32  Aligned_cols=116  Identities=14%  Similarity=0.182  Sum_probs=82.7

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCC----CceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINH----RNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW   77 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~H----pniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~   77 (290)
                      |+.+++|+...  ......+.+|.++|+.|.+    ..+++++++    +..|+||||++|.++......      .++.
T Consensus        57 g~~~vlR~~~~--~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~~l~~~~~~------~l~~  124 (320)
T 3r70_A           57 NEQYVVKVPKR--DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGERITYEQYH------KLSE  124 (320)
T ss_dssp             TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCBCCCHHHHT------TSCH
T ss_pred             CCEEEEEeCCc--HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCccccccccc------cCCH
Confidence            45677787643  2334568899999998865    234555544    567899999999888643321      3566


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCC----------------------------------------------------------
Q 044846           78 EMRLRITVEVSRVLSYLHSVAS----------------------------------------------------------   99 (290)
Q Consensus        78 ~~~~~~~~~i~~~l~ylH~~~~----------------------------------------------------------   99 (290)
                      .....++.+++..|..||+...                                                          
T Consensus       125 ~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  204 (320)
T 3r70_A          125 KEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIETIYENILSNAVLFK  204 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHHHHHHHHHHHhcccccc
Confidence            6667777888888888874322                                                          


Q ss_pred             --CCeEeccCCCCceEeccCCcEEEecccccc
Q 044846          100 --IPIYHLDIKSANILLVDKYQAKISDFRTFK  129 (290)
Q Consensus       100 --~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~  129 (290)
                        ..++|+|++|.||+++.++.+.|+||+.+.
T Consensus       205 ~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~  236 (320)
T 3r70_A          205 YTPCLVHNDFSANNMIFRNNRLFGVIDFGDFN  236 (320)
T ss_dssp             CCCEEECSCCSGGGEEEETTEEEEECCCTTCE
T ss_pred             CCceeeECCCCCCcEEEECCceEEEECCcccc
Confidence              125999999999999986667999998764


No 261
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.52  E-value=8e-07  Score=74.65  Aligned_cols=116  Identities=18%  Similarity=0.185  Sum_probs=83.6

Q ss_pred             ceEEEEeecccCchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHH
Q 044846            3 ELWLLKKSKSVHESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRL   81 (290)
Q Consensus         3 ~~~avK~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~   81 (290)
                      +.++||+-...   ....+.+|...|+.| .+--+.++++++...+..|+|||+++|.++.+......        ....
T Consensus        51 ~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~~~--------~~~~  119 (272)
T 4gkh_A           51 PELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEYP--------DSGE  119 (272)
T ss_dssp             CCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHHCG--------GGHH
T ss_pred             eEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccCCH--------HHHH
Confidence            45677776532   345678899999988 34347788889988899999999999988877654321        1223


Q ss_pred             HHHHHHHHHHHHHhhCC-------------------------------------------------------CCCeEecc
Q 044846           82 RITVEVSRVLSYLHSVA-------------------------------------------------------SIPIYHLD  106 (290)
Q Consensus        82 ~~~~~i~~~l~ylH~~~-------------------------------------------------------~~~iiHrd  106 (290)
                      .+..+++..|.-||...                                                       +..++|+|
T Consensus       120 ~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGD  199 (272)
T 4gkh_A          120 NIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGD  199 (272)
T ss_dssp             HHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSC
T ss_pred             HHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCC
Confidence            45566667777777421                                                       01279999


Q ss_pred             CCCCceEeccCCcEEEecccccc
Q 044846          107 IKSANILLVDKYQAKISDFRTFK  129 (290)
Q Consensus       107 lkp~Nil~~~~~~~kl~dfg~~~  129 (290)
                      +.+.||+++.++.+-|+||+.+.
T Consensus       200 l~~~Nil~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          200 FSLDNLIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             CCTTSEEEETTEEEEECCCTTCE
T ss_pred             CCCCeEEEECCeEEEEEECcccc
Confidence            99999999987767799998753


No 262
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.47  E-value=1.4e-06  Score=74.76  Aligned_cols=120  Identities=14%  Similarity=0.193  Sum_probs=79.6

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCC---ceeeEEeEEE-eCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHR---NVVKILGCCL-ETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITW   77 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hp---niv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~   77 (290)
                      |+.+++|+-..  ......+.+|.++|+.|.+.   .+.+.+.+.. ..+..++|||+++|.++......      .++.
T Consensus        39 g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~~~~~~------~l~~  110 (306)
T 3tdw_A           39 NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGEDGMA------VLPD  110 (306)
T ss_dssp             TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECHHHHHT------TSCH
T ss_pred             CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECchhhhh------hCCH
Confidence            45677887532  34456788999999999542   3556666664 34567899999999888763221      1344


Q ss_pred             HHHHHHHHHHHHHHHHHhhC---------------------------------------------------------CCC
Q 044846           78 EMRLRITVEVSRVLSYLHSV---------------------------------------------------------ASI  100 (290)
Q Consensus        78 ~~~~~~~~~i~~~l~ylH~~---------------------------------------------------------~~~  100 (290)
                      .....++.+++..|..||..                                                         .+.
T Consensus       111 ~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~  190 (306)
T 3tdw_A          111 DAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTP  190 (306)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCC
Confidence            44445555555555555532                                                         122


Q ss_pred             CeEeccCCCCceEecc---CCc-EEEecccccc
Q 044846          101 PIYHLDIKSANILLVD---KYQ-AKISDFRTFK  129 (290)
Q Consensus       101 ~iiHrdlkp~Nil~~~---~~~-~kl~dfg~~~  129 (290)
                      .++|+|+++.||+++.   ++. +.|+||+.+.
T Consensus       191 ~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~  223 (306)
T 3tdw_A          191 RLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA  223 (306)
T ss_dssp             EEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred             eeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence            3799999999999987   455 4899998754


No 263
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.10  E-value=9.3e-06  Score=71.42  Aligned_cols=55  Identities=7%  Similarity=0.128  Sum_probs=38.7

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCC--ceeeEEeEEEeC-CcceEEEEeCCCCCH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHR--NVVKILGCCLET-EVPLLVYEFIPNGSL   61 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hp--niv~~~~~~~~~-~~~~lv~e~~~~g~L   61 (290)
                      |+.+++|.....     ..+..|..+++.|...  .+.+++..+... +..|+|||+++|.++
T Consensus        64 g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l  121 (362)
T 3ovc_A           64 GRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTL  121 (362)
T ss_dssp             TEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEET
T ss_pred             CcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCc
Confidence            456777776432     2578999999998543  356677776654 568999999987554


No 264
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.07  E-value=5.6e-06  Score=72.40  Aligned_cols=61  Identities=3%  Similarity=0.047  Sum_probs=39.6

Q ss_pred             CceEEEEeecccC---chhHHHHHHHHHHHHhc-CC--CceeeEEeEEEeC---CcceEEEEeCCCCCHH
Q 044846            2 EELWLLKKSKSVH---ESNVEQFINEVVILSQI-NH--RNVVKILGCCLET---EVPLLVYEFIPNGSLY   62 (290)
Q Consensus         2 ~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l-~H--pniv~~~~~~~~~---~~~~lv~e~~~~g~L~   62 (290)
                      |+.+++|.-....   ......+.+|+.+++.| .+  -.+.+++.++...   +..|+|||+++|..+.
T Consensus        52 ~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A           52 QQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             EEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCCBCCC
T ss_pred             CceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccCCceEEEEecCCCChh
Confidence            3457777764321   00123567899999888 33  3577788777655   3568999999886654


No 265
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.98  E-value=5.3e-05  Score=64.36  Aligned_cols=56  Identities=14%  Similarity=0.078  Sum_probs=41.9

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcCCC---ceeeEEeEEEeCCcceEEEEeCCCCCH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQINHR---NVVKILGCCLETEVPLLVYEFIPNGSL   61 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hp---niv~~~~~~~~~~~~~lv~e~~~~g~L   61 (290)
                      |+.++||+...........|..|++.|+.|.+.   .+++++++.    ..++||||++|+++
T Consensus        39 G~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~~   97 (288)
T 3d1u_A           39 GTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERPP   97 (288)
T ss_dssp             SCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCCC
T ss_pred             CCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCCC
Confidence            567899987543333345788999999999764   577777653    46899999998764


No 266
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.54  E-value=0.0018  Score=55.71  Aligned_cols=29  Identities=28%  Similarity=0.295  Sum_probs=25.9

Q ss_pred             CCeEeccCCCCceEeccCCcEEEeccccc
Q 044846          100 IPIYHLDIKSANILLVDKYQAKISDFRTF  128 (290)
Q Consensus       100 ~~iiHrdlkp~Nil~~~~~~~kl~dfg~~  128 (290)
                      ..++|+|+.+.||+++.++.+.|+||+.+
T Consensus       222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a  250 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENEQIWVIDLDTV  250 (346)
T ss_dssp             CCEECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred             CceecCCCCcccEEEeCCCcEEEEehhhc
Confidence            34999999999999988888999999875


No 267
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.40  E-value=0.00079  Score=57.73  Aligned_cols=57  Identities=18%  Similarity=0.127  Sum_probs=43.4

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcC---CCceeeEEeEEEeCCcceEEEEeCCCCCH
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQIN---HRNVVKILGCCLETEVPLLVYEFIPNGSL   61 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~---Hpniv~~~~~~~~~~~~~lv~e~~~~g~L   61 (290)
                      ++.++||....   .....+..|.+.|+.|.   ...+++.+.+....+..++|||++++..+
T Consensus        59 ~~~~vlK~~~~---~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~  118 (312)
T 3jr1_A           59 VQTVFVKINER---SYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN  118 (312)
T ss_dssp             SCEEEEEEEEG---GGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred             CCeEEEEeCCc---ccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence            34577777653   23567889999999883   35688888888877889999999988754


No 268
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.32  E-value=0.0013  Score=52.95  Aligned_cols=98  Identities=15%  Similarity=0.009  Sum_probs=63.1

Q ss_pred             CCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccccccccCCcee
Q 044846           59 GSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTFKSRAIDRTHL  138 (290)
Q Consensus        59 g~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~  138 (290)
                      -+|.++|.....   ++++++++.++.|.+.+|.-+-.....  ..+=+-|..|++..+|.+...+ +.+.         
T Consensus        33 vSL~eIL~~~~~---PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~---------   97 (229)
T 2yle_A           33 LSLEEILRLYNQ---PINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD---------   97 (229)
T ss_dssp             EEHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred             ccHHHHHHHcCC---CcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc---------
Confidence            379999988765   799999999999999998776221100  1222346889999999888664 1110         


Q ss_pred             eccceecccccCccccccCCCCCcccchhhHHHHHHHh
Q 044846          139 TTQVKVTFGYVDPKYFRSSQFTEKSDVYSFSVVLVELN  176 (290)
Q Consensus       139 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwS~G~il~~l~  176 (290)
                          .....|.+||... ...+.+.=|||+|+++|.-+
T Consensus        98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~AL  130 (229)
T 2yle_A           98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKAL  130 (229)
T ss_dssp             -------------CCSS-SSSCHHHHHHHHHHHHHHHH
T ss_pred             ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHh
Confidence                1122467888763 33456778999999999865


No 269
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.28  E-value=0.001  Score=58.85  Aligned_cols=27  Identities=19%  Similarity=0.274  Sum_probs=23.3

Q ss_pred             eEeccCCCCceEeccCCcEEEecccccc
Q 044846          102 IYHLDIKSANILLVDKYQAKISDFRTFK  129 (290)
Q Consensus       102 iiHrdlkp~Nil~~~~~~~kl~dfg~~~  129 (290)
                      ++|+|+.+.||+++.+ .++++||..+.
T Consensus       229 L~HGDl~~~Nil~~~~-~~~lID~e~a~  255 (397)
T 2olc_A          229 LIHGDLHTGSIFASEH-ETKVIDPEFAF  255 (397)
T ss_dssp             EECSCCSGGGEEECSS-CEEECCCTTCE
T ss_pred             eeeCCCCcCcEEEeCC-CeEEEeCcccc
Confidence            9999999999999765 48999997653


No 270
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.21  E-value=0.0017  Score=55.96  Aligned_cols=29  Identities=24%  Similarity=0.403  Sum_probs=25.2

Q ss_pred             CeEeccCCCCceEeccC----CcEEEecccccc
Q 044846          101 PIYHLDIKSANILLVDK----YQAKISDFRTFK  129 (290)
Q Consensus       101 ~iiHrdlkp~Nil~~~~----~~~kl~dfg~~~  129 (290)
                      .++|+|+.+.||+++.+    +.+.|+||+.+.
T Consensus       184 ~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~  216 (333)
T 3csv_A          184 VFVHRDFHAQNLLWLPEREGLARVGVIDFQDAK  216 (333)
T ss_dssp             EEECSCCSGGGEEECTTSCGGGGEEECCCTTCE
T ss_pred             eeEeCCcCcccEEeccCcCCCCCeEEEeCCCcC
Confidence            49999999999999874    678999998764


No 271
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.15  E-value=0.0033  Score=56.07  Aligned_cols=29  Identities=10%  Similarity=0.194  Sum_probs=25.3

Q ss_pred             CeEeccCCCCceEeccCCcEEEeccccccc
Q 044846          101 PIYHLDIKSANILLVDKYQAKISDFRTFKS  130 (290)
Q Consensus       101 ~iiHrdlkp~Nil~~~~~~~kl~dfg~~~~  130 (290)
                      .++|+|+++.|||++.++ ++++||+.+..
T Consensus       233 ~liHGDl~~~Nil~~~~~-~~lID~e~a~~  261 (420)
T 2pyw_A          233 ALIHGDLHTGSVMVTQDS-TQVIDPEFSFY  261 (420)
T ss_dssp             EEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             eEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence            399999999999998776 99999987653


No 272
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.93  E-value=0.0024  Score=56.23  Aligned_cols=122  Identities=19%  Similarity=0.234  Sum_probs=71.5

Q ss_pred             ceEEEEeecccCchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCCHHH--------------HHhh
Q 044846            3 ELWLLKKSKSVHESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQ--------------YIHE   67 (290)
Q Consensus         3 ~~~avK~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~--------------~l~~   67 (290)
                      +.+++|+-.. .........+|.++++.| .+.-..++++.+..    .+||||++|.+|..              .+..
T Consensus        83 ~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~  157 (379)
T 3feg_A           83 REVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQYIPSRPLKTQELREPVLSAAIATKMAQ  157 (379)
T ss_dssp             SEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEECCSEEECCGGGGGCHHHHHHHHHHHHH
T ss_pred             CeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEEecCccCChhHhCCHHHHHHHHHHHHH
Confidence            5677777532 122355667899999988 44444677776643    39999998754431              1111


Q ss_pred             ---cC--CCCCCC-CHHHHHHHHHHHHH-------------------HHHHHh----hC-CCCCeEeccCCCCceEeccC
Q 044846           68 ---QT--DDQLPI-TWEMRLRITVEVSR-------------------VLSYLH----SV-ASIPIYHLDIKSANILLVDK  117 (290)
Q Consensus        68 ---~~--~~~~~~-~~~~~~~~~~~i~~-------------------~l~ylH----~~-~~~~iiHrdlkp~Nil~~~~  117 (290)
                         ..  ....+. -+.++..+..++..                   .+..|.    .. .+..++|+|+.+.||+++.+
T Consensus       158 LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~  237 (379)
T 3feg_A          158 FHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSE  237 (379)
T ss_dssp             HHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESC
T ss_pred             HhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCC
Confidence               00  001011 23455555544422                   233332    22 12338999999999999876


Q ss_pred             ----CcEEEecccccc
Q 044846          118 ----YQAKISDFRTFK  129 (290)
Q Consensus       118 ----~~~kl~dfg~~~  129 (290)
                          +.+.++||..+.
T Consensus       238 ~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          238 PENADSLMLVDFEYSS  253 (379)
T ss_dssp             C---CCEEECCCTTCE
T ss_pred             CCccCcEEEEecccCC
Confidence                789999998753


No 273
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.71  E-value=0.0017  Score=58.31  Aligned_cols=52  Identities=19%  Similarity=0.215  Sum_probs=33.4

Q ss_pred             ceEEEEeecccCchhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCcceEEEEeCCCCC
Q 044846            3 ELWLLKKSKSVHESNVEQFINEVVILSQI-NHRNVVKILGCCLETEVPLLVYEFIPNGS   60 (290)
Q Consensus         3 ~~~avK~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~e~~~~g~   60 (290)
                      +.+++|+......  ...+..|..+++.| .+.-.+++++.+..    .+|+||++|.+
T Consensus       106 ~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~l~G~~  158 (429)
T 1nw1_A          106 NKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYIPSRP  158 (429)
T ss_dssp             SEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCCCEEE
T ss_pred             ceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEEeCCcc
Confidence            5677887743111  24566899999988 34334677766532    38999997633


No 274
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.63  E-value=0.0092  Score=50.51  Aligned_cols=28  Identities=21%  Similarity=0.108  Sum_probs=23.8

Q ss_pred             CeEeccCCCCceEeccCCcEEEecccccc
Q 044846          101 PIYHLDIKSANILLVDKYQAKISDFRTFK  129 (290)
Q Consensus       101 ~iiHrdlkp~Nil~~~~~~~kl~dfg~~~  129 (290)
                      .++|+|+.+.||+ ..++.+.++||..+.
T Consensus       174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~  201 (301)
T 3dxq_A          174 AACHCDPLCENFL-DTGERMWIVDWEYSG  201 (301)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred             eeeccCCCcCCEE-ECCCCEEEEeccccc
Confidence            3899999999999 566788999998754


No 275
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.49  E-value=0.023  Score=47.67  Aligned_cols=55  Identities=15%  Similarity=0.119  Sum_probs=36.9

Q ss_pred             CceEEEEeecccCchhHHHHHHHHHHHHhcC-C-C-ceeeEEeEEEeCCcceEEEEeCCCCC
Q 044846            2 EELWLLKKSKSVHESNVEQFINEVVILSQIN-H-R-NVVKILGCCLETEVPLLVYEFIPNGS   60 (290)
Q Consensus         2 ~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~-H-p-niv~~~~~~~~~~~~~lv~e~~~~g~   60 (290)
                      |+.|++|+-..........|..|++.|+.|. . + -+++++++    +..++|||++.++.
T Consensus        39 G~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~~~   96 (288)
T 3f7w_A           39 GTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDERP   96 (288)
T ss_dssp             SCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCCCC
T ss_pred             CCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecccC
Confidence            6788999876544444456789999999883 2 1 24445543    23479999997654


No 276
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.27  E-value=0.013  Score=53.01  Aligned_cols=54  Identities=15%  Similarity=0.089  Sum_probs=32.7

Q ss_pred             ceEEEEeecccCchhHHHHHHHHHHHHhcCCC-ceeeEEeEEEeCCcceEEEEeCCCCCH
Q 044846            3 ELWLLKKSKSVHESNVEQFINEVVILSQINHR-NVVKILGCCLETEVPLLVYEFIPNGSL   61 (290)
Q Consensus         3 ~~~avK~~~~~~~~~~~~~~~E~~~l~~l~Hp-niv~~~~~~~~~~~~~lv~e~~~~g~L   61 (290)
                      +.+++|+.........+ -.+|..+++.|... -.+++++.+.  +  .+|+||++|.+|
T Consensus       134 ~~~vLRi~g~~~~~~id-R~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l  188 (458)
T 2qg7_A          134 AKYLIRLYGPKTDEIIN-REREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL  188 (458)
T ss_dssp             EEEEEEEECC-CCSCSC-HHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred             ceEEEEECCCChhhhcC-HHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence            56778876432222111 14899999998533 3467777763  2  369999987443


No 277
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.25  E-value=0.032  Score=47.52  Aligned_cols=27  Identities=22%  Similarity=0.212  Sum_probs=23.4

Q ss_pred             CeEeccCCCCceEeccCCcEEEecccccc
Q 044846          101 PIYHLDIKSANILLVDKYQAKISDFRTFK  129 (290)
Q Consensus       101 ~iiHrdlkp~Nil~~~~~~~kl~dfg~~~  129 (290)
                      .++|+|+++.||+++ + .+.++||+.+.
T Consensus       196 ~l~HgD~~~~Nil~~-~-~~~lIDfe~a~  222 (328)
T 1zyl_A          196 LRLHGDCHAGNILWR-D-GPMFVDLDDAR  222 (328)
T ss_dssp             EECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred             eeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence            389999999999998 4 89999998754


No 278
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.13  E-value=0.0096  Score=51.97  Aligned_cols=28  Identities=25%  Similarity=0.381  Sum_probs=23.0

Q ss_pred             CeEeccCCCCceEeccCCcEEEecccccc
Q 044846          101 PIYHLDIKSANILLVDKYQAKISDFRTFK  129 (290)
Q Consensus       101 ~iiHrdlkp~Nil~~~~~~~kl~dfg~~~  129 (290)
                      .++|+|+.+.|||++.++ +.++||..+.
T Consensus       213 ~l~HgDl~~~Nil~~~~~-~~lID~e~a~  240 (369)
T 3c5i_A          213 VFCHNDLQENNIINTNKC-LRLIDFEYSG  240 (369)
T ss_dssp             EEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred             EEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence            389999999999997554 8999998654


No 279
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.04  E-value=0.0096  Score=52.76  Aligned_cols=28  Identities=29%  Similarity=0.386  Sum_probs=24.9

Q ss_pred             CeEeccCCCCceEeccC------CcEEEeccccc
Q 044846          101 PIYHLDIKSANILLVDK------YQAKISDFRTF  128 (290)
Q Consensus       101 ~iiHrdlkp~Nil~~~~------~~~kl~dfg~~  128 (290)
                      .++|+|+.+.||+++.+      +.+.++||..+
T Consensus       245 v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a  278 (401)
T 3f2s_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYS  278 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSSCEEECCCTTC
T ss_pred             eEEeccCCcccEEEcCCcccCcccceEEEeeccC
Confidence            38999999999999876      78999999765


No 280
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.26  E-value=0.1  Score=46.47  Aligned_cols=28  Identities=18%  Similarity=0.317  Sum_probs=24.6

Q ss_pred             CeEeccCCCCceEeccCCcEEEecccccc
Q 044846          101 PIYHLDIKSANILLVDKYQAKISDFRTFK  129 (290)
Q Consensus       101 ~iiHrdlkp~Nil~~~~~~~kl~dfg~~~  129 (290)
                      .++|+|+.+.||+ +.++.+.++||..+.
T Consensus       263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a~  290 (424)
T 3mes_A          263 VFAHNDLQENNLL-QTQNNIRMIDYEYSA  290 (424)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred             eEECCCCCcccee-cCCCcEEEEecccCC
Confidence            3899999999998 778899999998754


No 281
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=91.83  E-value=0.068  Score=45.36  Aligned_cols=29  Identities=17%  Similarity=0.258  Sum_probs=24.7

Q ss_pred             CeEeccCCCCceEeccCCcEEEecccccc
Q 044846          101 PIYHLDIKSANILLVDKYQAKISDFRTFK  129 (290)
Q Consensus       101 ~iiHrdlkp~Nil~~~~~~~kl~dfg~~~  129 (290)
                      .++|+|+.+.|||++.++.+.|+||+.+.
T Consensus       188 ~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          188 GVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             EEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             ccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            38999999999999877666899998653


No 282
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=88.45  E-value=0.41  Score=41.10  Aligned_cols=30  Identities=23%  Similarity=0.300  Sum_probs=26.1

Q ss_pred             CCeEeccCCCCceEeccCCcEEEecccccc
Q 044846          100 IPIYHLDIKSANILLVDKYQAKISDFRTFK  129 (290)
Q Consensus       100 ~~iiHrdlkp~Nil~~~~~~~kl~dfg~~~  129 (290)
                      ..++|+|+.+.||+++.++.+.++||+.+.
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~  235 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPM  235 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCe
Confidence            349999999999999988889999997653


No 283
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=81.36  E-value=0.77  Score=40.36  Aligned_cols=28  Identities=32%  Similarity=0.426  Sum_probs=23.5

Q ss_pred             eEeccCCCCceEe------ccCCcEEEecccccc
Q 044846          102 IYHLDIKSANILL------VDKYQAKISDFRTFK  129 (290)
Q Consensus       102 iiHrdlkp~Nil~------~~~~~~kl~dfg~~~  129 (290)
                      ++|+|+.+.|||+      +.+..+.++||.+|.
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            6799999999999      345679999998754


No 284
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=81.06  E-value=4.5  Score=32.29  Aligned_cols=82  Identities=9%  Similarity=0.007  Sum_probs=54.8

Q ss_pred             CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHH-HHhhCCCCCeEeccCCCC
Q 044846           32 NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLS-YLHSVASIPIYHLDIKSA  110 (290)
Q Consensus        32 ~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~-ylH~~~~~~iiHrdlkp~  110 (290)
                      .||++.  ...-.+.+.+.+.++.-+++.=+..++       .++...+++++..|+.-.. +++.     -+|--|.|+
T Consensus        48 ~~~~f~--~~I~~~eD~~~i~y~~~~~~~~f~~i~-------~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~  113 (219)
T 4ano_A           48 VDPCIV--RDIDVSEDEVKVVIKPPSSFLTFAAIR-------KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPE  113 (219)
T ss_dssp             SCSSSE--EEEEECSSEEEEEEECCTTCEEHHHHH-------TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGG
T ss_pred             cCCCCC--eEEEEeCCEEEEEEEcCcccCcHHHHH-------hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCc
Confidence            577772  222345566566666543332223333       3677888888888776655 4433     457789999


Q ss_pred             ceEeccCCcEEEecccc
Q 044846          111 NILLVDKYQAKISDFRT  127 (290)
Q Consensus       111 Nil~~~~~~~kl~dfg~  127 (290)
                      |++++.++.+++.-.|+
T Consensus       114 NL~f~~~~~p~i~hRGi  130 (219)
T 4ano_A          114 NLMFNRALEPFFLHVGV  130 (219)
T ss_dssp             GEEECTTCCEEESCCEE
T ss_pred             eEEEeCCCcEEEEEcCC
Confidence            99999999999998886


No 285
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=75.01  E-value=2.8  Score=33.38  Aligned_cols=83  Identities=6%  Similarity=0.043  Sum_probs=56.2

Q ss_pred             CCCceeeEEeEEEeCCcceEEEEeCCCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCc
Q 044846           32 NHRNVVKILGCCLETEVPLLVYEFIPNGSLYQYIHEQTDDQLPITWEMRLRITVEVSRVLSYLHSVASIPIYHLDIKSAN  111 (290)
Q Consensus        32 ~Hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~ylH~~~~~~iiHrdlkp~N  111 (290)
                      .||+.+.. ..-...+.+.+.++.-  .+..++-.-.     .++...+++++..|+.-..+++.     -+|--|.|+|
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~--~~~~~f~~ik-----~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~N  109 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDIN--DNHTPFDNIK-----SFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDE  109 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCC--TTSEEGGGGG-----GSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGG
T ss_pred             cCCcccce-EEEEcccEEEEEEEcC--cccCCHHHHH-----hcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecce
Confidence            57887765 3444555544445443  3333332211     36778889999998877755543     3477899999


Q ss_pred             eEeccCCcEEEecccc
Q 044846          112 ILLVDKYQAKISDFRT  127 (290)
Q Consensus       112 il~~~~~~~kl~dfg~  127 (290)
                      ++++.++.+++.-.|+
T Consensus       110 L~f~~~~~p~i~~RGi  125 (215)
T 4ann_A          110 LFFTRDGLPIAKTRGL  125 (215)
T ss_dssp             EEECTTSCEEESCCEE
T ss_pred             EEEcCCCCEEEEEccC
Confidence            9999999999998886


No 286
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=67.53  E-value=0.27  Score=44.47  Aligned_cols=31  Identities=13%  Similarity=-0.053  Sum_probs=25.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCceeeEEeEEEeC
Q 044846           16 SNVEQFINEVVILSQINHRNVVKILGCCLET   46 (290)
Q Consensus        16 ~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~   46 (290)
                      ...++|..|++.+..++|+|+|++.|||...
T Consensus       321 ~g~~eF~~Eve~L~~i~HrNLV~L~gyC~s~  351 (487)
T 3oja_A          321 QGSETERLECERENQARQREIDALKEQYRTV  351 (487)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             ccHHHHHHHHHHHhcccccchhhHHHHhcCh
Confidence            3456799999999999999999999999664


No 287
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=49.11  E-value=1.8e+02  Score=27.49  Aligned_cols=44  Identities=25%  Similarity=0.244  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHH--HHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccc
Q 044846           78 EMRLRITVEVS--RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTF  128 (290)
Q Consensus        78 ~~~~~~~~~i~--~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~  128 (290)
                      ..+..++..+|  +-+.|+-.-|       |=.++|||++.+|++.-+|||.+
T Consensus       529 ~ar~nF~~SlA~~Svv~YILGlG-------DRH~~NILid~tG~v~HIDFG~~  574 (696)
T 2x6h_A          529 EVMDTYIKSCAGYCVITYLLGVG-------DRHLDNLLLTTNGKLFHIDFGYI  574 (696)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCC-------CCCTTTEEECTTSCEEECCCCSC
T ss_pred             HHHHHHHHHHHHHHHHHHHccCC-------CCCCcceEEeCCCCEEEEeehhh
Confidence            44556666654  4456665544       66789999999999999999975


No 288
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=37.34  E-value=2.5e+02  Score=25.95  Aligned_cols=45  Identities=22%  Similarity=0.206  Sum_probs=33.6

Q ss_pred             HHHHHHHHHHHH--HHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccc
Q 044846           77 WEMRLRITVEVS--RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTF  128 (290)
Q Consensus        77 ~~~~~~~~~~i~--~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~  128 (290)
                      ++.+..++..+|  +-+.|+-.-|       |=.++|||++.+|++.-+|||..
T Consensus       454 ~~a~~nF~~S~A~ySvv~YILGig-------DRH~~NILld~tG~v~HIDFG~~  500 (614)
T 3ls8_A          454 AEVMDTYVKSCAGYCVITYILGVG-------DRHLDNLLLTKTGKLFHIDFGYI  500 (614)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCC-------CCCTTSEEECTTSCEEECCCSSC
T ss_pred             HHHHHHHHHHHHHHhHhheeeecc-------CCCCcceeEcCCCCEeeeehHHh
Confidence            455666776654  4556765544       55689999999999999999975


No 289
>2fq3_A Transcription regulatory protein SWI3; four-helix bundle; 1.40A {Saccharomyces cerevisiae} SCOP: a.4.1.18
Probab=31.26  E-value=58  Score=22.46  Aligned_cols=32  Identities=9%  Similarity=0.098  Sum_probs=27.2

Q ss_pred             HHHHHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q 044846          202 KEEVITFAMVAKRCLNLNGKKQPTMKEVTLEL  233 (290)
Q Consensus       202 ~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l  233 (290)
                      +..-..+++.|-.+|..+|.+..|++++...|
T Consensus        46 pe~Yl~iRN~iI~~yr~nP~~yLT~t~~r~~l   77 (104)
T 2fq3_A           46 PEVYMRYRNFMVNSYRLNPNEYFSVTTARRNV   77 (104)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTSCCCHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHhCCceeeeHHHHHHHc
Confidence            34455688999999999999999999998776


No 290
>3bpy_A FORK head domain, forkhead transcription factor FOXO4, DNA binding domain; forkhead BOX, winged helix; 1.87A {Homo sapiens}
Probab=30.25  E-value=54  Score=21.64  Aligned_cols=29  Identities=10%  Similarity=0.162  Sum_probs=25.2

Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 044846          208 FAMVAKRCLNLNGKKQPTMKEVTLELAGI  236 (290)
Q Consensus       208 ~~~li~~cl~~dp~~Rps~~el~~~l~~~  236 (290)
                      ...||..++.-.|++|.|..||-+.+...
T Consensus        10 Y~~LI~~Ai~~sp~~~ltL~eIY~~i~~~   38 (85)
T 3bpy_A           10 YAELISQAIESAPEKRLTLAQIYEWMVRT   38 (85)
T ss_dssp             HHHHHHHHHHHSTTSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCcCCccHHHHHHHHHHh
Confidence            56789999999999999999999887654


No 291
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=29.40  E-value=94  Score=31.03  Aligned_cols=40  Identities=28%  Similarity=0.282  Sum_probs=29.2

Q ss_pred             HHHHHHH--HHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccc
Q 044846           82 RITVEVS--RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTF  128 (290)
Q Consensus        82 ~~~~~i~--~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~  128 (290)
                      .+++.+|  +-+.|+-.-       +|=.++|||++.+|++.-+|||.+
T Consensus       922 nF~~SlA~ySvv~YILGl-------GDRH~~NILid~tG~v~HIDFG~~  963 (1092)
T 2y3a_A          922 EFTLSCAGYCVASYVLGI-------GDRHSDNIMVKKTGQLFHIDFGHI  963 (1092)
T ss_dssp             HHHHHHHHHHHHHHHTTC-------CCCCTTTEEECTTSCEEECCCSCC
T ss_pred             HHHHHHHHHHHHHHHhcC-------CCCCCccEEEecCCCEEEEeehhh
Confidence            3555554  344555443       466789999999999999999974


No 292
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=28.99  E-value=79  Score=31.09  Aligned_cols=41  Identities=17%  Similarity=0.221  Sum_probs=29.2

Q ss_pred             HHHHHHHH--HHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccc
Q 044846           81 LRITVEVS--RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTF  128 (290)
Q Consensus        81 ~~~~~~i~--~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~  128 (290)
                      ..++..+|  +-+.|+-.-       +|=.++|||++.+|++.-+|||.+
T Consensus       785 ~~F~~S~A~ySvv~YILGi-------gDRH~~NILid~tG~v~HIDFG~~  827 (961)
T 1e7u_A          785 ERFVYSCAGYCVATFVLGI-------GDRHNDNIMISETGNLFHIDFGHI  827 (961)
T ss_dssp             HHHHHHHHHHHHHHHHTTC-------CCCCGGGEEEETTCCEEECCCCCC
T ss_pred             HHHHHHHHHHHHHHHHccc-------cCCCCcceEEecCCCEEEEeehhh
Confidence            34555544  334565443       466789999999999999999974


No 293
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=28.07  E-value=10  Score=33.95  Aligned_cols=38  Identities=11%  Similarity=0.132  Sum_probs=6.7

Q ss_pred             Eeecc--cCchhHHHHHHHHHHHHhcCCCceeeEEeEEEe
Q 044846            8 KKSKS--VHESNVEQFINEVVILSQINHRNVVKILGCCLE   45 (290)
Q Consensus         8 K~~~~--~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~   45 (290)
                      |..+.  ...+....+.+|..+++.++|||+++.+++-..
T Consensus       176 K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          176 DSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             -------------------------------CBCCCEEEE
T ss_pred             cccccccccccccccccccccccccccccccCCCcceEEe
Confidence            55543  223445678899999999999999998877653


No 294
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=26.56  E-value=1.2e+02  Score=30.15  Aligned_cols=59  Identities=20%  Similarity=0.307  Sum_probs=38.1

Q ss_pred             CHHHHHhhcCCCCCCCCHHH-HHHHHHHHH--HHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccc
Q 044846           60 SLYQYIHEQTDDQLPITWEM-RLRITVEVS--RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTF  128 (290)
Q Consensus        60 ~L~~~l~~~~~~~~~~~~~~-~~~~~~~i~--~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~  128 (290)
                      .|.++++....   ...+.. +..+++.+|  +-+.|+-.-|       |=.++|||++.+|++.-+|||.+
T Consensus       899 ~L~~~f~~~~~---~~~~~~ar~nF~~S~A~ysvv~YiLgig-------DRH~~NILid~tG~v~HIDFG~~  960 (1091)
T 3hhm_A          899 TLHQWLKDKNK---GEIYDAAIDLFTRSCAGYCVATFILGIG-------DRHNSNIMVKDDGQLFHIDFGHF  960 (1091)
T ss_dssp             HHHHHHHTTSC---TTSHHHHHHHHHHHHHHHHHHHHHHTCC-------CCCTTTEEEETTSCEEECCCCCC
T ss_pred             HHHHHHHhcCC---hHHHHHHHHHHHHHhhhhhheEEEEeec-------CCCCcceEEeCCCCEEEEeehhh
Confidence            35555544331   233443 345666654  4556665544       55689999999999999999975


No 295
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=25.44  E-value=87  Score=30.73  Aligned_cols=40  Identities=28%  Similarity=0.391  Sum_probs=29.6

Q ss_pred             HHHHHHH--HHHHHHhhCCCCCeEeccCCCCceEeccCCcEEEeccccc
Q 044846           82 RITVEVS--RVLSYLHSVASIPIYHLDIKSANILLVDKYQAKISDFRTF  128 (290)
Q Consensus        82 ~~~~~i~--~~l~ylH~~~~~~iiHrdlkp~Nil~~~~~~~kl~dfg~~  128 (290)
                      .+++.+|  +-+.|+-.-|       |=.++|||++.+|++.-+|||.+
T Consensus       770 ~F~~S~A~~Svv~YILGlg-------DRH~~NILid~tG~v~HIDFG~~  811 (940)
T 2wxf_A          770 EFTLSCAGYCVATYVLGIG-------DRHSDNIMIRESGQLFHIDFGHF  811 (940)
T ss_dssp             HHHHHHHHHHHHHHHHTCC-------CCCGGGEEEETTSCEEECCCCCC
T ss_pred             HHHHHHHHHHHHHHHhccC-------CCCcccEEEecCCCEEEEeehhh
Confidence            4555554  4456665444       66789999999999999999974


No 296
>3l2c_A Forkhead box protein O4; winged helix, transcription-DNA COMP; 1.87A {Homo sapiens} SCOP: a.4.5.14 PDB: 3co6_C*
Probab=24.69  E-value=72  Score=22.19  Aligned_cols=30  Identities=10%  Similarity=0.173  Sum_probs=25.9

Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 044846          207 TFAMVAKRCLNLNGKKQPTMKEVTLELAGI  236 (290)
Q Consensus       207 ~~~~li~~cl~~dp~~Rps~~el~~~l~~~  236 (290)
                      ....||..++.-.|++|.|..||-+.+...
T Consensus        28 SY~~LI~~AI~~sp~~~LtL~eIY~~I~~~   57 (110)
T 3l2c_A           28 SYAELISQAIESAPEKRLTLAQIYEWMVRT   57 (110)
T ss_dssp             CHHHHHHHHHHHSTTSCBCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCccCcCHHHHHHHHHHh
Confidence            367789999999999999999999888654


No 297
>2hdc_A Protein (transcription factor); structure, dyanamics, genesis, winged helix protein, protein/DNA complex; HET: DNA; NMR {Rattus norvegicus} SCOP: a.4.5.14
Probab=23.49  E-value=89  Score=21.17  Aligned_cols=28  Identities=7%  Similarity=0.118  Sum_probs=24.0

Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 044846          208 FAMVAKRCLNLNGKKQPTMKEVTLELAG  235 (290)
Q Consensus       208 ~~~li~~cl~~dp~~Rps~~el~~~l~~  235 (290)
                      ...||..++.-.|++|.|..||-+.+..
T Consensus         7 Y~~LI~~AI~~sp~~~ltL~eIY~~i~~   34 (97)
T 2hdc_A            7 YIALITMAILQSPQKKLTLSGICEFISN   34 (97)
T ss_dssp             HHHHHHHHHHTCTTTCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence            4578889999999999999999888754


No 298
>1vtn_C HNF-3/FORK head DNA-recognition motif; protein-DNA complex, double helix, transcription-DNA complex; HET: DNA; 2.50A {Homo sapiens} PDB: 1d5v_A
Probab=23.14  E-value=86  Score=21.45  Aligned_cols=29  Identities=10%  Similarity=0.128  Sum_probs=24.7

Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 044846          208 FAMVAKRCLNLNGKKQPTMKEVTLELAGI  236 (290)
Q Consensus       208 ~~~li~~cl~~dp~~Rps~~el~~~l~~~  236 (290)
                      ...||..++.-.|++|.|..||-+.+...
T Consensus         8 Y~~LI~~AI~~sp~~~LtL~eIY~~I~~~   36 (102)
T 1vtn_C            8 YISLITMAIQQAPGKMLTLSEIYQWIMDL   36 (102)
T ss_dssp             HHHHHHHHHHTSTTSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcHHHHHHHHHHc
Confidence            55788899999999999999998887554


No 299
>2a07_F Forkhead box protein P2; double-helix, swapping, homodimer, monomer, winged-helix, magnesium, transcription/DNA complex; 1.90A {Homo sapiens} SCOP: a.4.5.14 PDB: 2as5_F 2kiu_A 3qrf_F
Probab=22.33  E-value=90  Score=20.96  Aligned_cols=30  Identities=13%  Similarity=0.198  Sum_probs=25.2

Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHHHhhH
Q 044846          208 FAMVAKRCLNLNGKKQPTMKEVTLELAGIR  237 (290)
Q Consensus       208 ~~~li~~cl~~dp~~Rps~~el~~~l~~~~  237 (290)
                      ...||..++.-.|++|.|..||-+.+...-
T Consensus         8 Y~~LI~~AI~~sp~~~ltL~eIY~~i~~~f   37 (93)
T 2a07_F            8 YATLIRQAIMESSDRQLTLNEIYSWFTRTF   37 (93)
T ss_dssp             HHHHHHHHHHHSTTSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCccHHHHHHHHHHhC
Confidence            557888999999999999999998876543


No 300
>2hfh_A Genesis, HFH-2; HNF-3 homologues, winged helix protein; NMR {Rattus norvegicus} SCOP: a.4.5.14
Probab=22.32  E-value=88  Score=21.72  Aligned_cols=29  Identities=7%  Similarity=0.086  Sum_probs=24.7

Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 044846          208 FAMVAKRCLNLNGKKQPTMKEVTLELAGI  236 (290)
Q Consensus       208 ~~~li~~cl~~dp~~Rps~~el~~~l~~~  236 (290)
                      ...||..++.-.|++|.|..||-+.+...
T Consensus         8 Ya~LI~~AI~~sp~~~LtL~eIY~~I~~~   36 (109)
T 2hfh_A            8 YIALITMAILQSPQKKLTLSGICEFISNR   36 (109)
T ss_dssp             HHHHHHHHHHTCSSSCBCHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhCCCCCCcHHHHHHHHHHh
Confidence            56788899999999999999999887543


No 301
>3coa_C Forkhead box protein O1; winged helix, forkhead domain, chromosomal rearrangement; HET: DNA; 2.20A {Homo sapiens} PDB: 3co7_C* 2k86_A 2uzk_A
Probab=22.28  E-value=89  Score=22.00  Aligned_cols=29  Identities=10%  Similarity=0.193  Sum_probs=25.2

Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 044846          208 FAMVAKRCLNLNGKKQPTMKEVTLELAGI  236 (290)
Q Consensus       208 ~~~li~~cl~~dp~~Rps~~el~~~l~~~  236 (290)
                      ...||..++.-.|+.|.|..||-+.+...
T Consensus        16 Ya~LI~~AI~~sp~~~LTL~eIY~~I~~~   44 (117)
T 3coa_C           16 YADLITKAIESSAEKRLTLSQIYEWMVKS   44 (117)
T ss_dssp             HHHHHHHHHHTSTTSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCccHHHHHHHHHHh
Confidence            56789999999999999999999888654


No 302
>1kq8_A HFH-1, hepatocyte nuclear factor 3 forkhead homolog 1, winged; winged helix protein, structure, transcription; NMR {Rattus norvegicus} SCOP: a.4.5.14
Probab=21.22  E-value=97  Score=21.10  Aligned_cols=30  Identities=13%  Similarity=0.190  Sum_probs=25.0

Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 044846          207 TFAMVAKRCLNLNGKKQPTMKEVTLELAGI  236 (290)
Q Consensus       207 ~~~~li~~cl~~dp~~Rps~~el~~~l~~~  236 (290)
                      ....||..++.-.|++|.|..||-+.+...
T Consensus         6 SY~~LI~~AI~~sp~~~ltL~eIY~~i~~~   35 (100)
T 1kq8_A            6 SYIALITMAIRDSAGGRLTLAEINEYLMGK   35 (100)
T ss_dssp             -CHHHHHHHHTTSSSSCBCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCCCcHHHHHHHHHHh
Confidence            456789999999999999999998887544


Done!