Citrus Sinensis ID: 044851

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------15
Protein Sequence
MASNNQPPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHcccccccccEEEccccccHHHHHHHHHHHHHHcccccEEEEccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEEccccHHHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHHHccccEEEcccHHccccccHHHccHHcc
Coil and Loop (DISEMBL)
masnnqppqkqdtqpgkehvmnpipqftspdytpsnklRGMVALVtggdsgigrAVCHCFAQEGATVAftyvkpqedkDAKETLEMLREaktpdakdpmaisadlgfdenCKRVVDEVVNAYDRIDILVNNAaeqyecgsvedidesrl
Flexible Loop (DISEMBL)
masnnqppqkqdtqpgkehvMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLReaktpdakdpmaisadlgfdenCKRVVDEVVNAYDRIDILVNnaaeqyecgsvedidesrl
Low Complexity Region (SEG)
MASNNQPPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL
Disordered region (IsUnstruct)
*************************************LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK****************************SADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECG**********
Disordered Region (DISOPRED)
****NQP************VMNPIPQFT*PDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL
Disordered Region (DISEMBL)
*****************EHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL
Disordered Region (DISPRO)
********************MNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDID****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASNNQPPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	149	2.2.26 [Sep-21-2011]
Q5KTS5	291	Glucose and ribitol dehyd	N/A	no	1.0	0.512	0.726	1e-60
Q9FZ42	288	Glucose and ribitol dehyd	yes	no	0.946	0.489	0.751	5e-60
Q9MA93	289	Glucose and ribitol dehyd	no	no	0.953	0.491	0.706	6e-57
Q75KH3	300	Glucose and ribitol dehyd	yes	no	1.0	0.496	0.662	2e-49
O07575	289	Uncharacterized oxidoredu	yes	no	0.946	0.487	0.414	7e-25
P80873	286	General stress protein 39	no	no	0.919	0.479	0.426	1e-23
P40397	285	Uncharacterized oxidoredu	no	no	0.906	0.473	0.426	3e-23
P40398	299	Uncharacterized oxidoredu	no	no	0.885	0.441	0.350	5e-15
P0AG84	294	Uncharacterized oxidoredu	N/A	no	0.946	0.479	0.326	5e-14
P0AG85	294	Uncharacterized oxidoredu	N/A	no	0.946	0.479	0.326	5e-14

>sp|Q5KTS5|GRDH_DAUCA Glucose and ribitol dehydrogenase OS=Daucus carota GN=CAISE5 PE=2 SV=1

 Score =  231 bits (588), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 109/150 (72%), Positives = 130/150 (86%), Gaps = 1/150 (0%)

Query: 1   MASNNQ-PPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHC 59
           MAS  Q PPQKQ++QPGKEH+M+P PQ  SP Y P+NKL+G VALVTGGDSGIGR+VC+ 
Sbjct: 1   MASGGQFPPQKQESQPGKEHLMDPSPQHASPHYKPANKLQGKVALVTGGDSGIGRSVCYH 60

Query: 60  FAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV 119
           FA EGATVAFT+VK  EDKDA ETLE+LR+AK+ DAKDP+AI+ADLGFD+NCK+VVD+VV
Sbjct: 61  FALEGATVAFTFVKGHEDKDANETLELLRKAKSSDAKDPIAIAADLGFDDNCKKVVDQVV 120

Query: 120 NAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           NA+  ID+LVNNAAEQY+  +VEDIDE RL
Sbjct: 121 NAFGSIDVLVNNAAEQYKASTVEDIDEERL 150

May act as a short alcohol-polyol-sugar dehydrogenase possibly related to carbohydrate metabolism and the acquisition of desiccation tolerance. May also be involved in signal transduction.
Daucus carota (taxid: 4039)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q9FZ42|GRDH1_ARATH Glucose and ribitol dehydrogenase homolog 1 OS=Arabidopsis thaliana GN=At1g54870 PE=1 SV=1

 Score =  229 bits (583), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 106/141 (75%), Positives = 122/141 (86%)

Query: 9   QKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVA 68
           QKQ  QPGKEHVM   PQF+S DY PSNKLRG VAL+TGGDSGIGRAV +CFA EGATVA
Sbjct: 6   QKQHAQPGKEHVMESSPQFSSSDYQPSNKLRGKVALITGGDSGIGRAVGYCFASEGATVA 65

Query: 69  FTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDIL 128
           FTYVK QE+KDA+ETL+ML+E KT D+K+P+AI  DLGFDENCKRVVDEVVNA+ RID+L
Sbjct: 66  FTYVKGQEEKDAQETLQMLKEVKTSDSKEPIAIPTDLGFDENCKRVVDEVVNAFGRIDVL 125

Query: 129 VNNAAEQYECGSVEDIDESRL 149
           +NNAAEQYE  ++E+IDE RL
Sbjct: 126 INNAAEQYESSTIEEIDEPRL 146

May act as a short alcohol-polyol-sugar dehydrogenase possibly related to carbohydrate metabolism and the acquisition of desiccation tolerance. May also be involved in signal transduction.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9MA93|GRDH2_ARATH Glucose and ribitol dehydrogenase homolog 2 OS=Arabidopsis thaliana GN=At3g05260 PE=2 SV=1

 Score =  219 bits (557), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 101/143 (70%), Positives = 124/143 (86%), Gaps = 1/143 (0%)

Query: 7   PPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGAT 66
           PPQKQ+TQPG +HVM P P+F+S +Y PSNKL G VALVTGGDSGIG+AVCHC+A EGA+
Sbjct: 6   PPQKQETQPGIQHVMEPTPEFSSSNYKPSNKLHGKVALVTGGDSGIGKAVCHCYALEGAS 65

Query: 67  VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRID 126
           VAFTYVK +EDKDA+ETL +L E KT +AK+P+ I+ DLGF+ENCKRVV+EVVN++ RID
Sbjct: 66  VAFTYVKGREDKDAEETLRLLHEVKTREAKEPIMIATDLGFEENCKRVVEEVVNSFGRID 125

Query: 127 ILVNNAAEQYECGSVEDIDESRL 149
           +LVN AAEQ+E  S+EDIDE+RL
Sbjct: 126 VLVNCAAEQHEV-SIEDIDEARL 147

May act as a short alcohol-polyol-sugar dehydrogenase possibly related to carbohydrate metabolism and the acquisition of desiccation tolerance. May also be involved in signal transduction.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q75KH3|GRDH_ORYSJ Glucose and ribitol dehydrogenase homolog OS=Oryza sativa subsp. japonica GN=Os05g0140800 PE=2 SV=2

 Score =  194 bits (492), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 100/151 (66%), Positives = 115/151 (76%), Gaps = 2/151 (1%)

Query: 1   MASNNQPPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCF 60
           MAS   PPQ Q+TQPGKEH M+P P+     Y P+NKL+  VA+VTGGDSGIGRAVC CF
Sbjct: 1   MASQQFPPQNQETQPGKEHAMDPRPEAIIQSYKPANKLKDKVAIVTGGDSGIGRAVCLCF 60

Query: 61  AQEGATVAFTYVKPQEDKDAKETLEMLREAKT-PDAKDPMAISADLGFDENCKRVVDEVV 119
           A EGATVAFTYVK QE+KDA+ETL  LR+ +    AKDPMAI ADLG+D+NC++VVDEV 
Sbjct: 61  ALEGATVAFTYVKGQEEKDAEETLRALRDIRARTGAKDPMAIPADLGYDDNCRKVVDEVA 120

Query: 120 NAY-DRIDILVNNAAEQYECGSVEDIDESRL 149
            AY   IDILVNNAAEQYE  S+ DI E  L
Sbjct: 121 GAYGGAIDILVNNAAEQYERPSITDITEDDL 151

May act as a short alcohol-polyol-sugar dehydrogenase possibly related to carbohydrate metabolism and the acquisition of desiccation tolerance. May also be involved in signal transduction.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O07575|YHDF_BACSU Uncharacterized oxidoreductase YhdF OS=Bacillus subtilis (strain 168) GN=yhdF PE=3 SV=1

 Score =  112 bits (280), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 89/147 (60%), Gaps = 6/147 (4%)

Query: 3   SNNQPPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQ 62
           +  Q PQ QD QPG E  MNP+P     DY  S KL+G VA++TGGDSGIGRA    FA+
Sbjct: 8   TEGQEPQHQDRQPGIESKMNPLPLSEDEDYRGSGKLKGKVAIITGGDSGIGRAAAIAFAK 67

Query: 63  EGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAY 122
           EGA ++  Y+   E  DA+ET + + +         + I  D+G + +C++ V + V+ +
Sbjct: 68  EGADISILYL--DEHSDAEETRKRIEKENV----RCLLIPGDVGDENHCEQAVQQTVDHF 121

Query: 123 DRIDILVNNAAEQYECGSVEDIDESRL 149
            ++DILVNNAAEQ+   S+ +I   +L
Sbjct: 122 GKLDILVNNAAEQHPQDSILNISTEQL 148

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P80873|GS39_BACSU General stress protein 39 OS=Bacillus subtilis (strain 168) GN=ydaD PE=1 SV=3

 Score =  108 bits (270), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 86/143 (60%), Gaps = 6/143 (4%)

Query: 7   PPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGAT 66
           P Q Q  QPG E  MNP P +   DY  ++KL+G VAL+TGGDSGIGRAV   +A+EGA 
Sbjct: 9   PAQTQSRQPGIESEMNPSPVYEYEDYKGADKLKGKVALITGGDSGIGRAVSVAYAKEGAD 68

Query: 67  VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRID 126
           +A  Y    E +DA+ET + + +    +    + I+ D+G +E C   V++ V     +D
Sbjct: 69  IAIVY--KDEHEDAEETKKRVEQ----EGVKCLLIAGDVGEEEFCNEAVEKTVKELGGLD 122

Query: 127 ILVNNAAEQYECGSVEDIDESRL 149
           ILVNNA EQ+   S++DI   +L
Sbjct: 123 ILVNNAGEQHPKESIKDITSEQL 145

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P40397|YHXC_BACSU Uncharacterized oxidoreductase YhxC OS=Bacillus subtilis (strain 168) GN=yhxC PE=3 SV=2

 Score =  107 bits (266), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 85/143 (59%), Gaps = 8/143 (5%)

Query: 7   PPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGAT 66
           PPQ Q+ QPG E++M+P P F  P    + KL G  A++TGGDSGIGRAV   FA+EGA 
Sbjct: 10  PPQHQNQQPGFEYLMDPRPVFDKPK--KAKKLEGKTAIITGGDSGIGRAVSVLFAKEGAN 67

Query: 67  VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRID 126
           V   Y+   E +DA+ET + + +    +    + I+ D+G +  C  VV +    +  ID
Sbjct: 68  VVIVYL--NEHQDAEETKQYVEK----EGVKCLLIAGDVGDEAFCNDVVGQASQVFPSID 121

Query: 127 ILVNNAAEQYECGSVEDIDESRL 149
           ILVNNAAEQ+   S+E I   +L
Sbjct: 122 ILVNNAAEQHVQPSIEKITSHQL 144

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P40398|YHXD_BACSU Uncharacterized oxidoreductase YhxD OS=Bacillus subtilis (strain 168) GN=yhxD PE=3 SV=2

 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 5/137 (3%)

Query: 8   PQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATV 67
           P++    PG +  M P+P      Y  S KL G  ALVTGGDSGIGRA    +A+EGA V
Sbjct: 19  PEQYQEPPGLQKNMKPVPDCGEKSYKGSGKLTGRKALVTGGDSGIGRAAAIAYAREGADV 78

Query: 68  AFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDI 127
           A  Y+ P+E  DA+E  E++      + +  + I  DL  +  C+ +V +  +    +D+
Sbjct: 79  AINYL-PEEQPDAEEVKELIEA----EGRKAVLIPGDLSDESFCQDLVKQSHHELGGLDV 133

Query: 128 LVNNAAEQYECGSVEDI 144
           L   A +Q    ++ED+
Sbjct: 134 LALVAGKQQAVENIEDL 150

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P0AG84|YGHA_ECOLI Uncharacterized oxidoreductase YghA OS=Escherichia coli (strain K12) GN=yghA PE=1 SV=1

 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 6/147 (4%)

Query: 3   SNNQPPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQ 62
           +   P QKQ T PG +  M P+P      Y  S +L+   ALVTGGDSGIGRA    +A+
Sbjct: 13  TGEYPKQKQPT-PGIQAKMTPVPDCGEKTYVGSGRLKDRKALVTGGDSGIGRAAAIAYAR 71

Query: 63  EGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAY 122
           EGA VA +Y+ P E++DA++  +++ E      +  + +  DL  ++  + +V E   A 
Sbjct: 72  EGADVAISYL-PVEEEDAQDVKKIIEEC----GRKAVLLPGDLSDEKFARSLVHEAHKAL 126

Query: 123 DRIDILVNNAAEQYECGSVEDIDESRL 149
             +DI+   A +Q     + D+   + 
Sbjct: 127 GGLDIMALVAGKQVAIPDIADLTSEQF 153

Escherichia coli (strain K12) (taxid: 83333)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P0AG85|YGHA_ECO57 Uncharacterized oxidoreductase YghA OS=Escherichia coli O157:H7 GN=yghA PE=3 SV=1

 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 6/147 (4%)

Query: 3   SNNQPPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQ 62
           +   P QKQ T PG +  M P+P      Y  S +L+   ALVTGGDSGIGRA    +A+
Sbjct: 13  TGEYPKQKQPT-PGIQAKMTPVPDCGEKTYVGSGRLKDRKALVTGGDSGIGRAAAIAYAR 71

Query: 63  EGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAY 122
           EGA VA +Y+ P E++DA++  +++ E      +  + +  DL  ++  + +V E   A 
Sbjct: 72  EGADVAISYL-PVEEEDAQDVKKIIEEC----GRKAVLLPGDLSDEKFARSLVHEAHKAL 126

Query: 123 DRIDILVNNAAEQYECGSVEDIDESRL 149
             +DI+   A +Q     + D+   + 
Sbjct: 127 GGLDIMALVAGKQVAIPDIADLTSEQF 153

Escherichia coli O157:H7 (taxid: 83334)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	149
357441633	293	Glucose and ribitol dehydrogenase [Medic	1.0	0.508	0.801	2e-65
357441635	191	Glucose and ribitol dehydrogenase [Medic	1.0	0.780	0.801	2e-65
357512025	293	Glucose and ribitol dehydrogenase-like p	0.959	0.488	0.797	1e-63
388502942	293	unknown [Lotus japonicus]	1.0	0.508	0.768	4e-63
388514647	293	unknown [Lotus japonicus]	1.0	0.508	0.761	1e-62
224123214	293	predicted protein [Populus trichocarpa]	1.0	0.508	0.781	1e-62
449435679	293	PREDICTED: glucose and ribitol dehydroge	1.0	0.508	0.761	3e-60
449518007	293	PREDICTED: glucose and ribitol dehydroge	1.0	0.508	0.754	1e-59
23194375	294	putative TAG factor protein [Lupinus ang	1.0	0.506	0.736	7e-59
351722943	293	seed maturation protein PM34 [Glycine ma	0.899	0.457	0.805	8e-59

>gi|357441633|ref|XP_003591094.1| Glucose and ribitol dehydrogenase [Medicago truncatula] gi|355480142|gb|AES61345.1| Glucose and ribitol dehydrogenase [Medicago truncatula]

 Score =  253 bits (647), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 121/151 (80%), Positives = 135/151 (89%), Gaps = 2/151 (1%)

Query: 1   MASNNQ--PPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCH 58
           MAS  Q  PPQKQDTQPGKEHVM+P+PQFT PDY PSNKL+G VA++TGGDSGIGRAVC+
Sbjct: 1   MASGEQKFPPQKQDTQPGKEHVMDPLPQFTCPDYKPSNKLQGKVAVITGGDSGIGRAVCN 60

Query: 59  CFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV 118
            F+ EGATVAFTYVK  EDKDAK+TLEMLR AK+ DAKDPMA++ADLGFDENCK+VVDE+
Sbjct: 61  LFSLEGATVAFTYVKGDEDKDAKDTLEMLRNAKSADAKDPMAVAADLGFDENCKKVVDEI 120

Query: 119 VNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           VNAY  IDILVNNAAEQYEC SVE+IDESRL
Sbjct: 121 VNAYGHIDILVNNAAEQYECSSVEEIDESRL 151

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357441635|ref|XP_003591095.1| Glucose and ribitol dehydrogenase [Medicago truncatula] gi|355480143|gb|AES61346.1| Glucose and ribitol dehydrogenase [Medicago truncatula]

 Score =  253 bits (646), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 121/151 (80%), Positives = 135/151 (89%), Gaps = 2/151 (1%)

Query: 1   MASNNQ--PPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCH 58
           MAS  Q  PPQKQDTQPGKEHVM+P+PQFT PDY PSNKL+G VA++TGGDSGIGRAVC+
Sbjct: 1   MASGEQKFPPQKQDTQPGKEHVMDPLPQFTCPDYKPSNKLQGKVAVITGGDSGIGRAVCN 60

Query: 59  CFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV 118
            F+ EGATVAFTYVK  EDKDAK+TLEMLR AK+ DAKDPMA++ADLGFDENCK+VVDE+
Sbjct: 61  LFSLEGATVAFTYVKGDEDKDAKDTLEMLRNAKSADAKDPMAVAADLGFDENCKKVVDEI 120

Query: 119 VNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           VNAY  IDILVNNAAEQYEC SVE+IDESRL
Sbjct: 121 VNAYGHIDILVNNAAEQYECSSVEEIDESRL 151

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357512025|ref|XP_003626301.1| Glucose and ribitol dehydrogenase-like protein [Medicago truncatula] gi|87240540|gb|ABD32398.1| Short-chain dehydrogenase/reductase SDR [Medicago truncatula] gi|355501316|gb|AES82519.1| Glucose and ribitol dehydrogenase-like protein [Medicago truncatula]

 Score =  247 bits (630), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 114/143 (79%), Positives = 128/143 (89%)

Query: 7   PPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGAT 66
           PPQKQDTQPGKEH MNP PQFT PDY P+NKL+G +A+VTGGDSGIGRAVC+ FA EGAT
Sbjct: 9   PPQKQDTQPGKEHAMNPTPQFTCPDYKPANKLQGKIAVVTGGDSGIGRAVCNLFALEGAT 68

Query: 67  VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRID 126
           V FTYVK  EDKDA++TL+ML+ AKT +AKDPMAI ADLGFDENCKRV+DE++NAY RID
Sbjct: 69  VIFTYVKGHEDKDARDTLDMLKMAKTANAKDPMAIPADLGFDENCKRVIDEIINAYGRID 128

Query: 127 ILVNNAAEQYECGSVEDIDESRL 149
           ILVNNAAEQYECGSVE+IDE RL
Sbjct: 129 ILVNNAAEQYECGSVEEIDEPRL 151

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388502942|gb|AFK39537.1| unknown [Lotus japonicus]

 Score =  245 bits (626), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 116/151 (76%), Positives = 131/151 (86%), Gaps = 2/151 (1%)

Query: 1   MASNNQ--PPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCH 58
           MAS  Q  PPQKQ+TQPGKEH +NP PQF SP+Y PSNKL+G +AL+TGGDSGIGRAVC+
Sbjct: 1   MASGGQKFPPQKQETQPGKEHALNPAPQFASPEYKPSNKLQGKIALITGGDSGIGRAVCN 60

Query: 59  CFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV 118
            FA EGATV FTYV+ QEDKDA++T+EM++ AKT DAKDP+AI AD GFDENCKRVVDE 
Sbjct: 61  LFALEGATVIFTYVEGQEDKDARDTIEMIKRAKTADAKDPLAIPADFGFDENCKRVVDEA 120

Query: 119 VNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           VNAY RIDILVNNAAEQYECGSVE+IDE RL
Sbjct: 121 VNAYGRIDILVNNAAEQYECGSVEEIDEPRL 151

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388514647|gb|AFK45385.1| unknown [Lotus japonicus]

 Score =  244 bits (622), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 115/151 (76%), Positives = 133/151 (88%), Gaps = 2/151 (1%)

Query: 1   MASNNQ--PPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCH 58
           MAS  Q  PPQKQD QPGKEHVM+P+PQFT+PDY PSNKL+G +A++TGGDSGIGRAVC+
Sbjct: 1   MASGEQKFPPQKQDAQPGKEHVMDPVPQFTNPDYKPSNKLQGKIAVITGGDSGIGRAVCN 60

Query: 59  CFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV 118
            FA EGATVAFTYVK  EDKDA++TLEM+++AKT  AKDP+AI ADLGFDENCK+VVDEV
Sbjct: 61  LFALEGATVAFTYVKGSEDKDARDTLEMIKKAKTAGAKDPLAIPADLGFDENCKKVVDEV 120

Query: 119 VNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           V AY +IDIL+NNAAEQYEC SVE+IDE RL
Sbjct: 121 VKAYGQIDILINNAAEQYECASVEEIDEKRL 151

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123214|ref|XP_002319022.1| predicted protein [Populus trichocarpa] gi|222857398|gb|EEE94945.1| predicted protein [Populus trichocarpa]

 Score =  244 bits (622), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 118/151 (78%), Positives = 131/151 (86%), Gaps = 2/151 (1%)

Query: 1   MASNNQ--PPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCH 58
           MAS  Q  PPQKQ++QPGKEHVM+P PQ+T+PDY PSNKL+G VA+VTGGDSGIGRAVC 
Sbjct: 1   MASGGQKFPPQKQNSQPGKEHVMDPTPQYTNPDYKPSNKLQGKVAVVTGGDSGIGRAVCR 60

Query: 59  CFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV 118
            F  EGATVAFTYVK QEDKDA +TL+ML++ KT DAKDP+AI  DLGFDENCKRVVDEV
Sbjct: 61  SFVIEGATVAFTYVKAQEDKDADDTLQMLKKHKTADAKDPIAIPVDLGFDENCKRVVDEV 120

Query: 119 VNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           VNAY RIDILVNNAAEQYEC SVE+IDE RL
Sbjct: 121 VNAYGRIDILVNNAAEQYECSSVEEIDEQRL 151

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435679|ref|XP_004135622.1| PREDICTED: glucose and ribitol dehydrogenase homolog 1-like [Cucumis sativus]

 Score =  236 bits (601), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 115/151 (76%), Positives = 127/151 (84%), Gaps = 2/151 (1%)

Query: 1   MASNNQ--PPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCH 58
           MA+  Q  PPQKQ TQPGKEHVM+P PQFTS  Y PSNKL G VALVTGGDSGIGRAVCH
Sbjct: 1   MATEGQTFPPQKQQTQPGKEHVMDPSPQFTSSQYKPSNKLLGKVALVTGGDSGIGRAVCH 60

Query: 59  CFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV 118
           CFA EGATVAFTYVK QEDKDAK+ LE+LRE + PDAK P+A+ ADLGFDE+CKRVVDEV
Sbjct: 61  CFALEGATVAFTYVKKQEDKDAKDMLEILRECQAPDAKQPIAVGADLGFDEDCKRVVDEV 120

Query: 119 VNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           V AY RIDILVN AAEQ++  SVE+IDE R+
Sbjct: 121 VKAYGRIDILVNAAAEQHKTNSVEEIDEQRI 151

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449518007|ref|XP_004166035.1| PREDICTED: glucose and ribitol dehydrogenase homolog 1-like [Cucumis sativus]

 Score =  233 bits (595), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 114/151 (75%), Positives = 125/151 (82%), Gaps = 2/151 (1%)

Query: 1   MASNNQ--PPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCH 58
           MA+  Q  PPQKQ TQPGKEHVM+P PQFTS  Y PSNKL G VALVTGGDSGIGRAVCH
Sbjct: 1   MATEGQTFPPQKQQTQPGKEHVMDPSPQFTSSQYKPSNKLLGKVALVTGGDSGIGRAVCH 60

Query: 59  CFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV 118
           CFA EG TVAFTYVK QEDKDAK+ LE+LRE + PDAK P+A+ ADLGFDE CKRVVDEV
Sbjct: 61  CFALEGVTVAFTYVKKQEDKDAKDMLEILRECQAPDAKQPIAVGADLGFDEECKRVVDEV 120

Query: 119 VNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           V AY RIDILVN AAEQ++  SVE+IDE R+
Sbjct: 121 VKAYGRIDILVNAAAEQHKTNSVEEIDEQRI 151

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|23194375|gb|AAN15136.1| putative TAG factor protein [Lupinus angustifolius] gi|26000394|gb|AAN75426.1| putative TAG-associated factor [Lupinus angustifolius]

 Score =  231 bits (589), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 112/152 (73%), Positives = 129/152 (84%), Gaps = 3/152 (1%)

Query: 1   MASNNQ--PPQKQDTQPGKEHVMNPIPQFTSPD-YTPSNKLRGMVALVTGGDSGIGRAVC 57
           MAS+ Q  PPQKQ TQPGKEH+M P PQFT PD Y PS+KL+G +A+VTGGDSGIGRAVC
Sbjct: 1   MASSEQKFPPQKQYTQPGKEHLMYPTPQFTCPDEYKPSDKLKGKIAVVTGGDSGIGRAVC 60

Query: 58  HCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE 117
           + FA EGATV FTYVK  EDKDAK+TLE++R  KT D+K+P AI+ DLGFDENCK+V+DE
Sbjct: 61  NLFALEGATVIFTYVKGHEDKDAKDTLELIRRVKTSDSKEPKAIAVDLGFDENCKKVIDE 120

Query: 118 VVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           V+NAY  IDILVNNAAEQYECGSVE+IDE RL
Sbjct: 121 VINAYGSIDILVNNAAEQYECGSVEEIDEPRL 152

Source: Lupinus angustifolius

Species: Lupinus angustifolius

Genus: Lupinus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351722943|ref|NP_001238285.1| seed maturation protein PM34 [Glycine max] gi|9622153|gb|AAF89645.1|AF169018_1 seed maturation protein PM34 [Glycine max]

 Score =  231 bits (589), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 108/134 (80%), Positives = 121/134 (90%)

Query: 16  GKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ 75
           GKEH M P+PQFTSPDY PSNKL+G +ALVTGGDSGIGRAVC+ FA EGATVAFTYVK  
Sbjct: 18  GKEHAMTPVPQFTSPDYKPSNKLQGKIALVTGGDSGIGRAVCNLFALEGATVAFTYVKGH 77

Query: 76  EDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQ 135
           EDKDA++TLEM++ AKT DAKDPMAI++DLG+DENCKRVVDEVV+AY  IDILVNNAAEQ
Sbjct: 78  EDKDARDTLEMIKRAKTSDAKDPMAIASDLGYDENCKRVVDEVVSAYGCIDILVNNAAEQ 137

Query: 136 YECGSVEDIDESRL 149
           YECG+VEDIDE RL
Sbjct: 138 YECGTVEDIDEPRL 151

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	149
TAIR|locus:2096284	289	AT3G05260 [Arabidopsis thalian	0.986	0.508	0.697	2.7e-52
TIGR_CMR|BA_0748	288	BA_0748 "oxidoreductase, short	0.919	0.475	0.426	7.6e-25
ASPGD|ASPL0000046791	296	AN9002 [Emericella nidulans (t	0.939	0.472	0.403	3e-21
ASPGD|ASPL0000013842	302	AN3679 [Emericella nidulans (t	0.939	0.463	0.406	1.7e-20
UNIPROTKB|P0AG84	294	yghA "predicted glutathionylsp	0.885	0.448	0.347	4.7e-16
DICTYBASE|DDB_G0272154	301	DDB_G0272154 "short-chain dehy	0.919	0.455	0.380	4e-15
POMBASE|SPAC4H3.08	286	SPAC4H3.08 "3-hydroxyacyl-CoA	0.919	0.479	0.321	4e-13
TIGR_CMR|BA_1330	247	BA_1330 "3-oxoacyl-[acyl-carri	0.604	0.364	0.416	5.6e-13
WB|WBGene00009153	279	F26D2.15 [Caenorhabditis elega	0.617	0.329	0.395	2e-11
WB|WBGene00044811	280	F12E12.11 [Caenorhabditis eleg	0.617	0.328	0.385	5.7e-11

TAIR|locus:2096284 AT3G05260 [Arabidopsis thaliana (taxid:3702)]

 Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 104/149 (69%), Positives = 127/149 (85%)

Query:     1 MASNNQPPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCF 60
             MAS   PPQKQ+TQPG +HVM P P+F+S +Y PSNKL G VALVTGGDSGIG+AVCHC+
Sbjct:     1 MASGF-PPQKQETQPGIQHVMEPTPEFSSSNYKPSNKLHGKVALVTGGDSGIGKAVCHCY 59

Query:    61 AQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN 120
             A EGA+VAFTYVK +EDKDA+ETL +L E KT +AK+P+ I+ DLGF+ENCKRVV+EVVN
Sbjct:    60 ALEGASVAFTYVKGREDKDAEETLRLLHEVKTREAKEPIMIATDLGFEENCKRVVEEVVN 119

Query:   121 AYDRIDILVNNAAEQYECGSVEDIDESRL 149
             ++ RID+LVN AAEQ+E  S+EDIDE+RL
Sbjct:   120 SFGRIDVLVNCAAEQHEV-SIEDIDEARL 147

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TIGR_CMR|BA_0748 BA_0748 "oxidoreductase, short chain dehydrogenase/reductase family" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 61/143 (42%), Positives = 86/143 (60%)

Query:     7 PPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGAT 66
             P Q Q+ QPG E +MNP+PQF  P+Y  S KL+G   L+TGGDSGIGRAV   FA+EGA 
Sbjct:    11 PAQHQNKQPGIESLMNPLPQFEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGAN 70

Query:    67 VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRID 126
             +A  Y+   E+ DA ET + + +    +    + +  DL  +++CK +V E V     ++
Sbjct:    71 IAIAYL--DEEGDANETKQYVEK----EGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLN 124

Query:   127 ILVNNAAEQYECGSVEDIDESRL 149
             ILVNN A+QY    +E I   +L
Sbjct:   125 ILVNNVAQQYPQQGLEYITAEQL 147

GO:0008152 "metabolic process" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=ISS

ASPGD|ASPL0000046791 AN9002 [Emericella nidulans (taxid:162425)]

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 63/156 (40%), Positives = 89/156 (57%)

Query:     1 MASNN--QPPQKQDTQ--PGKEHVMNPIPQFTS-------PDYTPSNKLRGMVALVTGGD 49
             MA +N  Q P+   TQ  PG E  M P  + T         DY  S KL+G  AL+TGGD
Sbjct:     4 MAKDNTFQAPESAQTQNTPGLESKMQPASEATKLETSDGIKDYKGSGKLQGKKALITGGD 63

Query:    50 SGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDE 109
             SGIGR+V   +A+EGA +   Y+ P E++DA+ET  ++ EA   + +  + +S DL    
Sbjct:    64 SGIGRSVAALYAKEGADITIVYL-PVEEEDAQETKRLV-EA---EGRQCLLLSGDLRDRG 118

Query:   110 NCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDID 145
              CK+ VD  V  Y  I+ILVNNA++Q+ C  +  I+
Sbjct:   119 FCKQAVDSHVQKYGHINILVNNASQQFSCPDLAQIN 154

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

ASPGD|ASPL0000013842 AN3679 [Emericella nidulans (taxid:162425)]

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 61/150 (40%), Positives = 86/150 (57%)

Query:     3 SNNQPPQKQDTQPGKEHVMN-PIP---QFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCH 58
             + ++ P +Q  +PG +  M  P P   Q  S D   + KL G  A++TGGDSGIGRAV  
Sbjct:    18 TGHEVPVQQMKKPGLQSQMEKPQPTSTQIPSEDQA-AGKLLGKKAIITGGDSGIGRAVAI 76

Query:    59 CFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV 118
              FA EGA+   TY+ P+E++DA+ET   + EA     +    ++ DL   ENCK+VV+  
Sbjct:    77 LFAMEGASSLITYL-PEEEEDAQETKRRVEEA----GQKCYLLATDLRRKENCKKVVETA 131

Query:   119 VNAYDRIDILVNNAAEQYECGSVEDIDESR 148
             +     IDILVNNA  Q     + D+DES+
Sbjct:   132 LEKLGGIDILVNNAGTQTMLPDISDLDESQ 161

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

UNIPROTKB|P0AG84 yghA "predicted glutathionylspermidine synthase, with NAD(P)-binding Rossmann-fold domain" [Escherichia coli K-12 (taxid:83333)]

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 48/138 (34%), Positives = 75/138 (54%)

Query:     7 PPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGAT 66
             P QKQ T PG +  M P+P      Y  S +L+   ALVTGGDSGIGRA    +A+EGA 
Sbjct:    17 PKQKQPT-PGIQAKMTPVPDCGEKTYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGAD 75

Query:    67 VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRID 126
             VA +Y+ P E++DA++  +++ E      +  + +  DL  ++  + +V E   A   +D
Sbjct:    76 VAISYL-PVEEEDAQDVKKIIEEC----GRKAVLLPGDLSDEKFARSLVHEAHKALGGLD 130

Query:   127 ILVNNAAEQYECGSVEDI 144
             I+   A +Q     + D+
Sbjct:   131 IMALVAGKQVAIPDIADL 148

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

DICTYBASE|DDB_G0272154 DDB_G0272154 "short-chain dehydrogenase/reductase (SDR) family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 192 (72.6 bits), Expect = 4.0e-15, P = 4.0e-15
 Identities = 59/155 (38%), Positives = 80/155 (51%)

Query:     9 QKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVA 68
             Q+QD  PG +  MNP+P      Y  +N+LRG   LVTGGDSGIGRAV     +EGA V 
Sbjct:    11 QQQDV-PGVQSEMNPVPDCGEETYKGNNRLRGRRVLVTGGDSGIGRAVTIAMFREGADVC 69

Query:    69 FTYVKPQEDKDAKETLEML--REAK------------TPDAKDPMAISADLGFDENCKRV 114
              +Y+ P E KDA ++L+ L  +E K            T   K  M I  DL  ++ CK +
Sbjct:    70 ISYL-PSEKKDA-DSLKCLLEKEIKNTSGGGSGGGTTTCGGKFEM-IQGDLTCEKFCKDL 126

Query:   115 VDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
             V+E  N    +D LV  A +Q     + +I   +L
Sbjct:   127 VEETKNRLGGLDTLVLVAGKQCAKNCITEITTEQL 161

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

POMBASE|SPAC4H3.08 SPAC4H3.08 "3-hydroxyacyl-CoA dehydrogenase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 174 (66.3 bits), Expect = 4.0e-13, P = 4.0e-13
 Identities = 47/146 (32%), Positives = 74/146 (50%)

Query:     7 PPQKQDTQPGKEHVMNPIPQFTSP-D---YTPSNKLRGMVALVTGGDSGIGRAVCHCFAQ 62
             P  +    PGK   ++P P      D   +  S KL     L+TGGDSGIG+A    FA+
Sbjct:     5 PSTQTQKWPGKHADLDPEPSLLRYCDGRVHVGSGKLAEKKTLLTGGDSGIGKAAAVMFAR 64

Query:    63 EGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAY 122
             EG+ +  + + P+E  DA+ T +++      + ++       L   +NC+ +VD  +   
Sbjct:    65 EGSDLVISCL-PEERDDAEVTRDLIER----EGRNCWIWEGKLDKSDNCRDLVDFALKKL 119

Query:   123 DRIDILVNNAAEQYECGSVEDIDESR 148
               ID+LVNN A Q    S+EDID+ +
Sbjct:   120 GWIDVLVNNIAYQQVAQSIEDIDDEQ 145

GO:0003857 "3-hydroxyacyl-CoA dehydrogenase activity" evidence=ISO

GO:0004300 "enoyl-CoA hydratase activity" evidence=ISO

GO:0005634 "nucleus" evidence=IDA

GO:0005782 "peroxisomal matrix" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0006631 "fatty acid metabolic process" evidence=ISS

GO:0006635 "fatty acid beta-oxidation" evidence=ISO

GO:0033554 "cellular response to stress" evidence=IEP

TIGR_CMR|BA_1330 BA_1330 "3-oxoacyl-[acyl-carrier protein] reductase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 40/96 (41%), Positives = 54/96 (56%)

Query:    37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
             +L G VA+VTGG  GIG+A+    AQEGA V   Y        +KE  E L      +  
Sbjct:     3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINY------NSSKEAAENLVNELGKEGH 56

Query:    97 DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             D  A+ AD+   E+  R+V+E VN + ++DILVNNA
Sbjct:    57 DVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNA 92

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

WB|WBGene00009153 F26D2.15 [Caenorhabditis elegans (taxid:6239)]

 Score = 159 (61.0 bits), Expect = 2.0e-11, P = 2.0e-11
 Identities = 38/96 (39%), Positives = 58/96 (60%)

Query:    37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
             +  G VAL+TG  +GIGRA    FAQ+GA V  T    +  +  KET   ++++  P A+
Sbjct:     3 RFSGKVALITGSSNGIGRAAAILFAQQGAKVTIT---GRNAERLKETRHEIKKSGIP-AE 58

Query:    97 DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             + +AI AD+  DE   R++++ V  +  +DILVNNA
Sbjct:    59 NILAIVADVITDEGQMRLINDTVRKFGHLDILVNNA 94

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008667 "2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity" evidence=IEA

GO:0009239 "enterobactin biosynthetic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

WB|WBGene00044811 F12E12.11 [Caenorhabditis elegans (taxid:6239)]

 Score = 155 (59.6 bits), Expect = 5.7e-11, P = 5.7e-11
 Identities = 37/96 (38%), Positives = 58/96 (60%)

Query:    37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
             +  G VALVTG  +GIGRA    FAQ+GA V  T    +  +  +ET + + ++  P A+
Sbjct:     3 RFSGKVALVTGSSNGIGRAAALLFAQQGAKVTIT---GRNAERLEETRQAILKSGVP-AE 58

Query:    97 DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             + +AI+ADL  D+    +++  +  + R+DILVNNA
Sbjct:    59 NVLAIAADLATDQGQTDLINGTLQKFGRLDILVNNA 94

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008667 "2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity" evidence=IEA

GO:0009239 "enterobactin biosynthetic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FZ42	GRDH1_ARATH	1, ., 1, ., 1, ., -	0.7517	0.9463	0.4895	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	149
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	1e-55
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	1e-44
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-25
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-23
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	2e-23
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-22
cd05233	234	cd05233, SDR_c, classical (c) SDRs	3e-21
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	1e-20
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	2e-18
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-18
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-18
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	6e-18
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-18
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	2e-17
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	2e-17
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	3e-17
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-17
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	7e-17
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	7e-17
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	1e-16
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	3e-16
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	4e-16
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	5e-16
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	5e-16
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-15
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	3e-15
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	3e-15
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	9e-15
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	9e-15
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	1e-14
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	3e-14
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	5e-14
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	6e-14
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	7e-14
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	1e-13
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	2e-13
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	2e-13
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	2e-13
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	2e-13
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	2e-13
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	3e-13
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	3e-13
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	3e-13
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	5e-13
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	5e-13
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	5e-13
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	5e-13
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	5e-13
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	7e-13
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	8e-13
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	8e-13
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	8e-13
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	1e-12
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	1e-12
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	2e-12
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	7e-12
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	9e-12
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	1e-11
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	1e-11
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	2e-11
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	2e-11
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	2e-11
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	2e-11
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	2e-11
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	3e-11
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	3e-11
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	3e-11
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	4e-11
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	4e-11
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	4e-11
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	4e-11
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	4e-11
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	4e-11
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	5e-11
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	5e-11
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	6e-11
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	7e-11
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	7e-11
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	9e-11
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	1e-10
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	1e-10
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	1e-10
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	1e-10
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	1e-10
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	2e-10
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	2e-10
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	2e-10
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	2e-10
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	3e-10
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	3e-10
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	3e-10
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	3e-10
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	4e-10
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	4e-10
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	5e-10
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	5e-10
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	5e-10
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	5e-10
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	6e-10
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	7e-10
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	8e-10
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	8e-10
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	8e-10
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	1e-09
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	1e-09
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	1e-09
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	1e-09
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	1e-09
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	2e-09
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	2e-09
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	2e-09
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	3e-09
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	3e-09
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	5e-09
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	5e-09
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	5e-09
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	6e-09
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	1e-08
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	1e-08
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	1e-08
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-08
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	2e-08
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	2e-08
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	2e-08
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	2e-08
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	2e-08
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	2e-08
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	3e-08
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	3e-08
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	3e-08
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	3e-08
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	4e-08
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	4e-08
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	4e-08
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	5e-08
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	5e-08
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	6e-08
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	6e-08
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	6e-08
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	6e-08
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	7e-08
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	7e-08
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	8e-08
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	9e-08
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	1e-07
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	1e-07
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	2e-07
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	2e-07
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	2e-07
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-07
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	2e-07
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	2e-07
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	3e-07
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	3e-07
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	3e-07
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	4e-07
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	4e-07
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	4e-07
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	4e-07
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	4e-07
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	4e-07
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	4e-07
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	5e-07
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	5e-07
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	5e-07
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	5e-07
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	5e-07
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-07
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	6e-07
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	6e-07
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	6e-07
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-07
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	8e-07
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-06
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	1e-06
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	1e-06
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	2e-06
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	2e-06
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	3e-06
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	3e-06
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	3e-06
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	4e-06
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	4e-06
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	5e-06
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	1e-05
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	1e-05
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	1e-05
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	1e-05
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	2e-05
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	2e-05
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	2e-05
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	3e-05
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	5e-05
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	8e-05
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-05
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	1e-04
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	1e-04
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	1e-04
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	1e-04
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	1e-04
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	1e-04
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	2e-04
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	2e-04
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	4e-04
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-04
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	5e-04
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	5e-04
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	6e-04
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	7e-04
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	7e-04
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	9e-04
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	0.001
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	0.001
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	0.001
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	0.001
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	0.001
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	0.002
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	0.002
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	0.002
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	0.003

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  175 bits (445), Expect = 1e-55
 Identities = 63/135 (46%), Positives = 84/135 (62%), Gaps = 5/135 (3%)

Query: 15  PGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP 74
           PG E  M+P+P F    Y  S KL+G  AL+TGGDSGIGRAV   FA+EGA VA  Y+  
Sbjct: 1   PGIEAKMDPLPDFGEKSYKGSGKLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPE 60

Query: 75  QEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAE 134
           +ED DA+ET +++ E         + I  DLG +  C+ +V EVV  + ++DILVNNAA 
Sbjct: 61  EED-DAEETKKLIEEEGR----KCLLIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAY 115

Query: 135 QYECGSVEDIDESRL 149
           Q+   S+EDI   +L
Sbjct: 116 QHPQESIEDITTEQL 130

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  147 bits (372), Expect = 1e-44
 Identities = 68/146 (46%), Positives = 89/146 (60%), Gaps = 6/146 (4%)

Query: 4   NNQPPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQE 63
              P Q Q+ QPG E +MNP+PQF +P+Y  S KL+G VAL+TGGDSGIGRAV   FA+E
Sbjct: 10  PPMPAQHQNKQPGIESLMNPLPQFEAPNYKGSGKLKGKVALITGGDSGIGRAVAVLFAKE 69

Query: 64  GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYD 123
           GA +A  Y+   E +DA ET    ++    +    + I  D+  +  CK  V+E V    
Sbjct: 70  GADIAIVYL--DEHEDANET----KQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG 123

Query: 124 RIDILVNNAAEQYECGSVEDIDESRL 149
           R+DILVNNAA QY   S+EDI   +L
Sbjct: 124 RLDILVNNAAFQYPQQSLEDITAEQL 149

Length = 290

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 97.2 bits (242), Expect = 2e-25
 Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 5/114 (4%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            L G VALVTG  SGIGRA+    A+EGA V        E++ A+     ++EA    A 
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAAR-RSEEEAAEALAAAIKEAGGGRAA 60

Query: 97  DPMAISADLGFDEN-CKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
              A++AD+  DE   + +V      + RIDILVNNA        +E++ E   
Sbjct: 61  ---AVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDW 111

Length = 251

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 91.8 bits (229), Expect = 1e-23
 Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            L G VALVTG   GIGRA+    A +GA V   Y     +  A+  +  +         
Sbjct: 2   SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYAS--SEAGAEALVAEIGAL----GG 55

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
             +A+  D+   E+ +R VDE    +  +DILVNNA 
Sbjct: 56  KALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAG 92

Length = 248

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 92.6 bits (230), Expect = 2e-23
 Identities = 53/143 (37%), Positives = 81/143 (56%), Gaps = 10/143 (6%)

Query: 6   QPPQKQDTQ--PGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQE 63
           QPP  + TQ  PG  H M P P      Y    +L+G  AL+TG DSGIGRA    FA+E
Sbjct: 19  QPPFPEQTQEAPGTIHEMQPKPDHGEQSYKGFGRLQGRKALITGADSGIGRATAIAFARE 78

Query: 64  GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYD 123
           GA +A  Y+ P+E++DA E +++++       +  +A+  DL  +  C+++V+  V    
Sbjct: 79  GADIALNYL-PEEEQDAAEVVQLIQAE----GRKAVALPGDLKDEAFCRQLVERAVKELG 133

Query: 124 RIDILVNNAAEQYECGSVEDIDE 146
            +DILVN A +Q    +V+DI +
Sbjct: 134 GLDILVNIAGKQT---AVKDIAD 153

Length = 300

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 87.2 bits (217), Expect = 7e-22
 Identities = 43/110 (39%), Positives = 64/110 (58%), Gaps = 7/110 (6%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           KL G VA+VTG   GIGRA+    A+EGA V   Y   +E   A+E LE ++E       
Sbjct: 2   KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEE--AAQELLEEIKEE----GG 55

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
           D +A+ AD+  +E+ + +V+++V  + +IDILVNNA      G V D+ +
Sbjct: 56  DAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISN-FGLVTDMTD 104

Length = 247

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 85.4 bits (212), Expect = 3e-21
 Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 12/108 (11%)

Query: 43  ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS 102
           ALVTG  SGIGRA+    A+EGA V       +   +      +   A        +A+ 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALGGNA--------VAVQ 52

Query: 103 ADLGFDENCKRVVDEVVNAYDRIDILVNNAA----EQYECGSVEDIDE 146
           AD+  +E+ + +V+E +  + R+DILVNNA        E  + ED D 
Sbjct: 53  ADVSDEEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDR 100

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 83.8 bits (208), Expect = 1e-20
 Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 7/91 (7%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           VALVTG   GIGRA+    A EGA VA T      ++ A ET+E ++        +  A+
Sbjct: 2   VALVTGASRGIGRAIALRLAAEGAKVAVTDRS---EEAAAETVEEIKALG----GNAAAL 54

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            AD+   E  + +V++V   +  +DILVNNA
Sbjct: 55  EADVSDREAVEALVEKVEAEFGPVDILVNNA 85

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 79.3 bits (195), Expect = 2e-18
 Identities = 48/138 (34%), Positives = 75/138 (54%), Gaps = 6/138 (4%)

Query: 7   PPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGAT 66
           P QKQ T PG +  M P+P      Y  S +L+   ALVTGGDSGIGRA    +A+EGA 
Sbjct: 17  PKQKQPT-PGIQAKMTPVPDCGEKTYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGAD 75

Query: 67  VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRID 126
           VA +Y+ P E++DA++  +++ E      +  + +  DL  ++  + +V E   A   +D
Sbjct: 76  VAISYL-PVEEEDAQDVKKIIEEC----GRKAVLLPGDLSDEKFARSLVHEAHKALGGLD 130

Query: 127 ILVNNAAEQYECGSVEDI 144
           I+   A +Q     + D+
Sbjct: 131 IMALVAGKQVAIPDIADL 148

Length = 294

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 77.6 bits (192), Expect = 4e-18
 Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 6/96 (6%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G VALVTG   G+GRA+    A+ GA V   Y    +++ A+E +E +          
Sbjct: 4   LMGRVALVTGAARGLGRAIALRLARAGADVVVHY--RSDEEAAEELVEAVEALGRRAQ-- 59

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
             A+ AD+      +  V   V  + RIDILVNNA 
Sbjct: 60  --AVQADVTDKAALEAAVAAAVERFGRIDILVNNAG 93

Length = 249

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 77.1 bits (191), Expect = 5e-18
 Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 7/96 (7%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            L+G  ALVTG   GIGRA+    A +GA V       +    A+     LR A      
Sbjct: 2   SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEA---AEALAAELRAA----GG 54

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           +   +  D+  +   + +++  V A+  +DILVNNA
Sbjct: 55  EARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNA 90

Length = 246

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 76.9 bits (190), Expect = 6e-18
 Identities = 33/96 (34%), Positives = 41/96 (42%), Gaps = 7/96 (7%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G VALVTG   GIGRA+    A +GA V    +      DA  T E++          
Sbjct: 4   LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGD---DAAATAELVEA----AGGK 56

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
             A   D+      K  V   V  + R+DILV NA 
Sbjct: 57  ARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAG 92

Length = 251

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 76.7 bits (189), Expect = 8e-18
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 6/95 (6%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+  V +VTG   GIGRA+    A+EG+ V     K  E+    ETL+M++E       +
Sbjct: 4   LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEE--MNETLKMVKEN----GGE 57

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            + + AD+   E C+ +    ++ Y   DILVNNA
Sbjct: 58  GIGVLADVSTREGCETLAKATIDRYGVADILVNNA 92

Length = 252

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 75.8 bits (186), Expect = 2e-17
 Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 6/96 (6%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L G VA+VTGG  GIG+A+    AQEGA V   Y        +KE  E L      +  
Sbjct: 3   QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINY------NSSKEAAENLVNELGKEGH 56

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           D  A+ AD+   E+  R+V+E VN + ++DILVNNA
Sbjct: 57  DVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNA 92

Length = 247

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 75.3 bits (186), Expect = 2e-17
 Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 6/90 (6%)

Query: 43  ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS 102
           ALVTG   GIGRA+    A+EGA V  TY     ++ A+E +E L+            + 
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRS--SEEGAEEVVEELKAYGVKAL----GVV 54

Query: 103 ADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            D+   E+ K VV+E+      IDILVNNA
Sbjct: 55  CDVSDREDVKAVVEEIEEELGPIDILVNNA 84

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 74.7 bits (184), Expect = 3e-17
 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)

Query: 43  ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS 102
           ALVTGG  GIG+A+    A+ GA V   Y K      A E    + E         + + 
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRK--SKDAAAEVAAEIEE----LGGKAVVVR 54

Query: 103 ADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
           AD+   ++ + +   V   + R+D+LV+NAA
Sbjct: 55  ADVSQPQDVEEMFAAVKERFGRLDVLVSNAA 85

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 74.5 bits (184), Expect = 6e-17
 Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 8/111 (7%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G VA+VTG  SGIG  +   FA EGA V  T    +  +     +     A       
Sbjct: 3   LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRA------- 55

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR 148
            +A++AD+  + + +  V   +  +  +DILVNNA   +  G + D+DE+ 
Sbjct: 56  -IAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAE 105

Length = 251

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 74.3 bits (183), Expect = 7e-17
 Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 6/106 (5%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+G VALVTG  SGIG+A+    A  GA V   Y      +DA E  E++ E K      
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRS---KEDAAE--EVVEEIKA-VGGK 54

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVED 143
            +A+ AD+  +E+   +    +  +  +DILVNNA  Q +  S E 
Sbjct: 55  AIAVQADVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEM 100

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 74.2 bits (183), Expect = 7e-17
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 6/101 (5%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+G VA +TGG +GIG+A+   FA+ GA+VA    KP+  + A E +      +      
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRA----- 55

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYEC 138
              I  D+   E  +  VDE +  + +IDIL+NNAA  +  
Sbjct: 56  -HPIQCDVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLA 95

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 73.5 bits (181), Expect = 1e-16
 Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 11/112 (9%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L+G VAL+TG  SGIG AV   +  EGA V    +KP           +      P A 
Sbjct: 3   RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKP-------ARARLAALEIGPAA- 54

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR 148
             +A+S D+   ++  R+V   V  +  IDIL NNAA  ++   + DI    
Sbjct: 55  --IAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAA-LFDMAPILDISRDS 103

Length = 257

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 72.5 bits (178), Expect = 3e-16
 Identities = 41/111 (36%), Positives = 55/111 (49%), Gaps = 11/111 (9%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L G VA+VTG  SGIGRA    FA+EGA V         D+DA+    +          
Sbjct: 2   RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVA------DRDAEAAERVAAAIAA--GG 53

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYEC-GSVEDIDE 146
              A   D+G  E  + +VD V   + R+D+LVNNA   + C G+V   DE
Sbjct: 54  RAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAG--FGCGGTVVTTDE 102

Length = 252

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 71.9 bits (177), Expect = 4e-16
 Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 7/93 (7%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
           G VALVT   SGIG A+    A+EGA VA         ++ +E LE             +
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAIC------ARN-RENLERAASELRAGGAGVL 53

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           A+ ADL   E+  R+V++  +A+ R+DILVNNA
Sbjct: 54  AVVADLTDPEDIDRLVEKAGDAFGRVDILVNNA 86

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 71.9 bits (177), Expect = 5e-16
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 7/96 (7%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            L G  ALVTGG  G+G  +     + GA V  +  K +E ++A   LE L         
Sbjct: 9   DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL-------GI 61

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           D + I+AD+  + + +R+ +E +  +  +DILVNNA
Sbjct: 62  DALWIAADVADEADIERLAEETLERFGHVDILVNNA 97

Length = 259

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 71.8 bits (177), Expect = 5e-16
 Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 11/110 (10%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            L+G VALVTG  SGIG  +    A+EGA V    +    D+ A    E L++A      
Sbjct: 1   MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLN---DEAAAAAAEALQKA----GG 53

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
             + ++ D+  +E     +D  V  +  +DILVNNA  Q+    V  I++
Sbjct: 54  KAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQH----VAPIED 99

Length = 258

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 71.0 bits (174), Expect = 1e-15
 Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 13/114 (11%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           S + +G VAL+TGG  GIGRA+   F +EGA VA  Y     + +AKE    LRE     
Sbjct: 2   SMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLY--NSAENEAKE----LRE----- 50

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR 148
            K    I  D+G  +  K+  + V   + R+D+LVNNA   Y     E+ DE +
Sbjct: 51  -KGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLM-PFEEFDEEK 102

Length = 255

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 70.1 bits (172), Expect = 3e-15
 Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 10/98 (10%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLR---EAKTPD 94
           L G VA++TG  SGIG      FA+ GA +A T       +DA E LE  R         
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALT------GRDA-ERLEETRQSCLQAGVS 53

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            K  + + ADL  +E   R++   +  + R+DILVNNA
Sbjct: 54  EKKILLVVADLTEEEGQDRIISTTLAKFGRLDILVNNA 91

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 69.8 bits (171), Expect = 3e-15
 Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 7/112 (6%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           S    G VALVTGG +GIGRA    FA+EGA V    V  ++    +ET+ ++REA    
Sbjct: 2   SMTFSGKVALVTGGAAGIGRATALAFAREGAKVV---VADRDAAGGEETVALIREA---- 54

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
             + + ++ D+  D   K +V++ + AY R+D   NNA  + E G + +  E
Sbjct: 55  GGEALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSE 106

Length = 253

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 68.5 bits (168), Expect = 9e-15
 Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 7/93 (7%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
           G V ++TG   GIGRA+    A+ GA +          ++    L  L +       + +
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLA------ARNE-TRLASLAQELADHGGEAL 53

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            +  D+   E C+R+++  V  +  IDILVNNA
Sbjct: 54  VVPTDVSDAEACERLIEAAVARFGGIDILVNNA 86

Length = 263

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 68.5 bits (168), Expect = 9e-15
 Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 7/98 (7%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           + L G  ALVTG   G+G A     A+ GATVAF      E   A+E    L  A     
Sbjct: 3   SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAE---ARELAAALEAA----G 55

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
               AI+ADL    + +R  D    A   +D LVNNA 
Sbjct: 56  GRAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAG 93

Length = 250

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 68.0 bits (167), Expect = 1e-14
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 12/98 (12%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA--KETLEML-REAKTPD 94
           L+G V ++TG  SGIG  + +  A+ GA +  +         A  +E LE +  E     
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLS---------ARREERLEEVKSECLELG 51

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           A  P  +  D+   E+ ++VV+E +  +  +DIL+NNA
Sbjct: 52  APSPHVVPLDMSDLEDAEQVVEEALKLFGGLDILINNA 89

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 67.0 bits (164), Expect = 3e-14
 Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 10/96 (10%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            L G VA+VTGG SGIG A+   FA +GA VA          D  E +  +  A      
Sbjct: 12  DLSGKVAVVTGGASGIGHAIAELFAAKGARVALL--------DRSEDVAEV--AAQLLGG 61

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           +   +  D+   ++ +  V  V++A+ RIDILVN+A
Sbjct: 62  NAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSA 97

Length = 255

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 66.5 bits (163), Expect = 5e-14
 Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 10/113 (8%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            L G VAL+TGG SGIGRA+   F  EGA VA        ++ A E L  LR+       
Sbjct: 3   WLHGQVALITGGGSGIGRALVERFLAEGARVAVL------ERSA-EKLASLRQR---FGD 52

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
             + +  D+    + +R VD+ V+A+ ++D  V NA       S+ DI    L
Sbjct: 53  HVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETL 105

Length = 263

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 67.6 bits (166), Expect = 6e-14
 Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 13/102 (12%)

Query: 34  PSNK-LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKT 92
           P  K L G VALVTG   GIG+A     A EGA V         D D     E    A  
Sbjct: 415 PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLA------DLDE----EAAEAAAA 464

Query: 93  P--DAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                   + ++ D+  +   +   +E   A+  +DI+V+NA
Sbjct: 465 ELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNA 506

Length = 681

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 65.9 bits (161), Expect = 7e-14
 Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 5/101 (4%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFT-----YVKPQEDKDAKETLEMLREAKT 92
           L G VA VTG   GIGRA+    A+ GATV               K    T+E   E   
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 93  PDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
                 + I  D+  ++  + +V+  V+ + R+DILVNNA 
Sbjct: 61  AAGGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAG 101

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 65.4 bits (160), Expect = 1e-13
 Identities = 39/97 (40%), Positives = 49/97 (50%), Gaps = 10/97 (10%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDA 95
            L+  V +VTGG SGIG A+    A+EGA  V F    P       E  E LR A  P A
Sbjct: 4   NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAP-----DDEFAEELR-ALQPRA 57

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           +    +  DL  D  C+  V++ V  + RID LVNNA
Sbjct: 58  E---FVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNA 91

Length = 258

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 64.8 bits (158), Expect = 2e-13
 Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 7/108 (6%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L   VA+VTG   GIG A+    A +G  VA  Y        A E +  +  A       
Sbjct: 3   LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAA--AADELVAEIEAA----GGR 56

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDID 145
            +A+ AD+       R+ D    A+ RID+LVNNA      G++ D D
Sbjct: 57  AIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAG-VMPLGTIADFD 103

Length = 245

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 66.1 bits (162), Expect = 2e-13
 Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 7/102 (6%)

Query: 31  DYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREA 90
                  L G V L+TG  SGIGRA     A+ GATV F   +  E  D  E +  +R  
Sbjct: 362 RRDLRGPLVGKVVLITGASSGIGRATAIKVAEAGATV-FLVARNGEALD--ELVAEIRAK 418

Query: 91  KTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                    A + DL         V +++  +  +D LVNNA
Sbjct: 419 GG----TAHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNA 456

Length = 657

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 65.1 bits (159), Expect = 2e-13
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
           G  ALVTG  SGIG A+    A  GA V         ++ A+   ++  +A        +
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDF---GEEGAEAAAKVAGDA----GGSVI 53

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
            + AD+  ++    ++      +  +DILVNNA  Q+    V  I+E
Sbjct: 54  YLPADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQH----VAPIEE 96

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 64.6 bits (158), Expect = 2e-13
 Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 7/110 (6%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G VALVTG   GIGRA+    A++GA+V   Y   +    A+E +  +  A    A  
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKA--AAEEVVAEIEAAG-GKA-- 55

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDES 147
            +A+ AD+       R+ D    A+  +DILVNNA        + +  E 
Sbjct: 56  -IAVQADVSDPSQVARLFDAAEKAFGGVDILVNNAG-VMLKKPIAETSEE 103

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 2e-13
 Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 5/98 (5%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
            N+L G VALVTG   GIG A+   FA+EGA VA   +   +   A+     +       
Sbjct: 2   MNRLAGKVALVTGAAQGIGAAIARAFAREGAAVA---LADLDAALAERAAAAIARDVAGA 58

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               +A+ AD+    +    V     A+  +D+LVNNA
Sbjct: 59  --RVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNA 94

Length = 260

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 3e-13
 Identities = 38/109 (34%), Positives = 50/109 (45%), Gaps = 9/109 (8%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G+  LVTGG SGIGRA+   FA+ GA V    V                 A+ P AK 
Sbjct: 9   LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATA--------ARLPGAK- 59

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
             A  AD+      +RV D  V  +  +D+LVNNA      G +++I  
Sbjct: 60  VTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITP 108

Length = 264

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 64.3 bits (157), Expect = 3e-13
 Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 10/97 (10%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           N+L+G VA+VTGG  G+G A       EGA V  + +    D++ +     L +A     
Sbjct: 1   NRLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDI---LDEEGQAAAAELGDAA---- 53

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                   D+  ++    VVD    A+ R+D+LVNNA
Sbjct: 54  ---RFFHLDVTDEDGWTAVVDTAREAFGRLDVLVNNA 87

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 64.2 bits (157), Expect = 3e-13
 Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 7/112 (6%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
            +L G VA++TG  SGIGRA    FA+EGA V     +  E       L+ L      + 
Sbjct: 2   MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAE-------LDQLVAEIRAEG 54

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDES 147
            + +A++ D+  +   K +V   V  +  +DI  NNA    E G V ++   
Sbjct: 55  GEAVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLE 106

Length = 254

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 63.8 bits (156), Expect = 5e-13
 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 13/109 (11%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           V L+TG  SGIG A+    A +G  V  T   P       + LE L E    + +    +
Sbjct: 2   VVLITGCSSGIGLALALALAAQGYRVIATARNP-------DKLESLGELLNDNLE---VL 51

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYEC-GSVEDIDESRL 149
             D+  +E+ K  V EV+  + RID+LVNNA   Y   G +E+     +
Sbjct: 52  ELDVTDEESIKAAVKEVIERFGRIDVLVNNAG--YGLFGPLEETSIEEV 98

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 63.6 bits (155), Expect = 5e-13
 Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 6/94 (6%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
           G VALVTG   GIG+A+    A+EG  +A  Y + +  K A+ET E + EA    A   +
Sbjct: 4   GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSR--KAAEETAEEI-EALGRKA---L 57

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
           A+ A++G  E  K +  ++   + R+D+ VNNAA
Sbjct: 58  AVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAA 91

Length = 250

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 63.8 bits (156), Expect = 5e-13
 Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 18/101 (17%)

Query: 33  TPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKT 92
           +   +L G  ALVTGG  GIG A      + GA V  T         A+        ++ 
Sbjct: 2   SFFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTT---------AR--------SRP 44

Query: 93  PDAKDPMA-ISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            D  + +  ++ADL   E C  V   V+     +DILV+  
Sbjct: 45  DDLPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVL 85

Length = 260

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 63.8 bits (156), Expect = 5e-13
 Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 8/97 (8%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           + +  G V +VTG   GIGR V    A EGA V           D  E +  +       
Sbjct: 3   NQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLV--------DRSELVHEVAAELRAA 54

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNN 131
             + +A++ADL      +  +   V A+ RID+L+NN
Sbjct: 55  GGEALALTADLETYAGAQAAMAAAVEAFGRIDVLINN 91

Length = 260

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 63.7 bits (155), Expect = 5e-13
 Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 21/110 (19%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+  VA+VTGG  GIG+AV +   +EG+ V    +K     D                  
Sbjct: 4   LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVDY--------------- 48

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA-EQYECGSVEDIDE 146
                 D+   E   + +D V++ Y RIDILVNNA  E Y  G++  ++E
Sbjct: 49  ---FKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESY--GAIHAVEE 93

Length = 258

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 63.2 bits (154), Expect = 7e-13
 Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 6/91 (6%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           +ALVTGG  GIG A+C   A++G  VA     P E++        L+E       D   +
Sbjct: 2   IALVTGGMGGIGTAICQRLAKDGYRVAANCG-PNEER----AEAWLQEQGALGF-DFRVV 55

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             D+   E+CK  V +V      ID+LVNNA
Sbjct: 56  EGDVSSFESCKAAVAKVEAELGPIDVLVNNA 86

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 63.1 bits (154), Expect = 8e-13
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 8/97 (8%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTY-VKPQEDKDAKETLEMLREAKTPDA 95
            L+G VA+VTGG  GIG A+    A+ GA VA  Y   P+ ++ A+E    L +      
Sbjct: 5   SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEE----LAKKYGVKT 60

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           K   A   D+   E+ ++   ++   + +IDIL+ NA
Sbjct: 61  K---AYKCDVSSQESVEKTFKQIQKDFGKIDILIANA 94

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 63.2 bits (154), Expect = 8e-13
 Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 6/95 (6%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G V ++TGG +G+GRA+   F +E A V   Y   +E  +A +  E +++A      +
Sbjct: 5   LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEE--EANDVAEEIKKA----GGE 58

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            +A+  D+  + +   ++   V  +  +D+++NNA
Sbjct: 59  AIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNA 93

Length = 261

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 63.2 bits (154), Expect = 8e-13
 Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 10/111 (9%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
            +L G VA+VTG  SG G  +   FAQEGA V         D +A     +  +    +A
Sbjct: 1   MRLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIA------DINADGAERVAADI--GEA 52

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
               AI AD+    + + +V+  ++ + R+DILVNNA   +    + ++DE
Sbjct: 53  AI--AIQADVTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDE 101

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 62.7 bits (153), Expect = 1e-12
 Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 8/100 (8%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTP 93
             +L G VALVTGG  G+G A+   FA+ GA  +       ++ +     LE L      
Sbjct: 1   MGRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL------ 54

Query: 94  DAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
                + + ADL   E+C+RVV     A+ R+D LVN A 
Sbjct: 55  -GAKAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAG 93

Length = 260

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 62.7 bits (153), Expect = 1e-12
 Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 6/91 (6%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           VA+VT  DSGIG+A     AQ+G  +  T+    +++ AKET E +R             
Sbjct: 4   VAIVTASDSGIGKACALLLAQQGFDIGITWHS--DEEGAKETAEEVRSH----GVRAEIR 57

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             DL       + +D+++    RID+LVNNA
Sbjct: 58  QLDLSDLPEGAQALDKLIQRLGRIDVLVNNA 88

Length = 256

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 62.0 bits (151), Expect = 2e-12
 Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 7/99 (7%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
             V ++TGG SG+G+A+   FA+EGA V  T       +  ++  E   E +    +  +
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVIT------GRTKEKLEEAKLEIEQFPGQ-VL 53

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYEC 138
            +  D+   E+ +++V+++   + RID L+NNAA  + C
Sbjct: 54  TVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFIC 92

Length = 252

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 60.9 bits (148), Expect = 7e-12
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L G  AL+TG   GIG A+   F   GA V         D DA          + P  +
Sbjct: 6   RLDGQTALITGASKGIGLAIAREFLGLGADVLIV----ARDADALAQARDELAEEFP-ER 60

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           +   ++AD+  DE+ + ++D V + +D + ILVNNA
Sbjct: 61  EVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNA 96

Length = 257

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 60.6 bits (147), Expect = 9e-12
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 8/105 (7%)

Query: 28  TSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEML 87
           +S    PS +L G VALVTGG +GIG ++   F + GA V    ++    ++  ++L   
Sbjct: 6   SSASSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG-- 63

Query: 88  REAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                    +      D+  +++  R VD  V+ +  +DI+VNNA
Sbjct: 64  ------GEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNA 102

Length = 280

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 60.1 bits (146), Expect = 1e-11
 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFT-YVKPQEDKDAKETLEMLREAKTPDAK 96
           L+G VALVTG   GIG  +    A+ GA +      + + ++  +   +   EA      
Sbjct: 3   LKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEA------ 56

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              A + D+  +E  K  V+ +   + +IDILVNNA
Sbjct: 57  --TAFTCDVSDEEAIKAAVEAIEEDFGKIDILVNNA 90

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 59.7 bits (145), Expect = 1e-11
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 8/96 (8%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            L G VA+VTGG++G+G+      A+ GA +  T      D    ET  ++ +      +
Sbjct: 12  SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWD----ETRRLIEKE----GR 63

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               +  DL   E+ ++VV E +  + +IDILVNNA
Sbjct: 64  KVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNA 99

Length = 258

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 59.4 bits (144), Expect = 2e-11
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 9/95 (9%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G VALVTG ++G+G+ +    A+ GA +           +  ET + +        + 
Sbjct: 3   LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRS-----EPSETQQQV----EALGRR 53

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            ++++ADL   E  K +VD  V  +  IDILVNNA
Sbjct: 54  FLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNA 88

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 58.9 bits (143), Expect = 2e-11
 Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 15/109 (13%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           VALVTG   GIG  +    A++G  V+    +  ED  A        EA   DA+DP   
Sbjct: 2   VALVTGASRGIGIEIARALARDGYRVSLGL-RNPEDLAALSASGGDVEAVPYDARDPEDA 60

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNAA----EQYECGSVEDIDE 146
            A          +VD + + + RID+LV+NA          GS  +++ 
Sbjct: 61  RA----------LVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEA 99

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 59.2 bits (143), Expect = 2e-11
 Identities = 34/96 (35%), Positives = 46/96 (47%), Gaps = 10/96 (10%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G  AL+TG   GIGRA    + +EGA VA   +  +  +     +        P A  
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIG-------PAA-- 51

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
             AIS D+    +  R V  +V+ +  IDILVNNAA
Sbjct: 52  -CAISLDVTDQASIDRCVAALVDRWGSIDILVNNAA 86

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 59.3 bits (144), Expect = 2e-11
 Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 11/112 (9%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            L G   L+TG   GIG A    FA EG  +         D DA E L     A      
Sbjct: 4   HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLV----ARDADALEALAADLRAAHG--V 57

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR 148
           D    + DL   E      +++      IDILVNNA      G ++D+D++ 
Sbjct: 58  DVAVHALDLSSPEA----REQLAAEAGDIDILVNNAGA-IPGGGLDDVDDAA 104

Length = 259

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 59.2 bits (144), Expect = 2e-11
 Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 11/111 (9%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           ++L+G  AL+TGG SGIG      F  EGA VA T   P        +LE  R      A
Sbjct: 2   SRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDP-------ASLEAARAELGESA 54

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
              + I AD G     K +   +  A+ R+D +  NA    +   +ED DE
Sbjct: 55  ---LVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVA-KFAPLEDWDE 101

Length = 249

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 59.9 bits (145), Expect = 3e-11
 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 10/95 (10%)

Query: 39  RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDP 98
           +  V LVTG   GIGRA C  FA+ G  V    V  +  + A+E  + L         D 
Sbjct: 4   QSRVVLVTGAAGGIGRAACQRFARAGDQVV---VADRNVERARERADSLGP-------DH 53

Query: 99  MAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
            A++ D+  +   +   +++   + RID+LVNNA 
Sbjct: 54  HALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAG 88

Length = 520

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 58.8 bits (143), Expect = 3e-11
 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 13/111 (11%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKT---PD 94
           L+G V +V+G   G+GR +    A+ GA V            A  T E L E        
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVL----------AARTAERLDEVAAEIDDL 52

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDID 145
            +  +A+  D+  ++ C  +V   +  + R+D LVNNA        + D D
Sbjct: 53  GRRALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADAD 103

Length = 258

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 58.9 bits (143), Expect = 3e-11
 Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 8/93 (8%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
           G VALVTGG SGIG A+    A EGA V    + P+  +   E  +    A        +
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRA--------L 52

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            +  D+  +   +   ++ V  +  +DI+V+NA
Sbjct: 53  GVQCDVTSEAQVQSAFEQAVLEFGGLDIVVSNA 85

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 58.4 bits (142), Expect = 4e-11
 Identities = 35/103 (33%), Positives = 46/103 (44%), Gaps = 9/103 (8%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA-KETLEMLREAKTPDAKDPMA 100
           VAL+TGG   IG A+       G  VA  Y +   + DA    L  LR           A
Sbjct: 8   VALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALR------PGSAAA 61

Query: 101 ISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQY--ECGSV 141
           + ADL   +    +V   V A+ R+D LVNNA+  Y    GS+
Sbjct: 62  LQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSI 104

Length = 249

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 58.4 bits (142), Expect = 4e-11
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 13/100 (13%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA--KETLEMLREAKT 92
              L+G VAL+TG  SGIG A     A+ GA V            A  +E LE L +   
Sbjct: 1   MTTLKGKVALITGASSGIGEATARALAEAGAKVVLA---------ARREERLEALADEIG 51

Query: 93  PDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             A   +A+  D+      +  ++ +   + RIDILVNNA
Sbjct: 52  AGAALALAL--DVTDRAAVEAAIEALPEEFGRIDILVNNA 89

Length = 246

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 58.7 bits (142), Expect = 4e-11
 Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 6/93 (6%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
             V +VTGG  GIGR +   F + GA V F        + A + LE   E          
Sbjct: 9   DKVVIVTGGSRGIGRGIVRAFVENGAKVVFC----ARGEAAGQALE--SELNRAGPGSCK 62

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            +  D+  +E+ K ++   V  + RID LVNNA
Sbjct: 63  FVPCDVTKEEDIKTLISVTVERFGRIDCLVNNA 95

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 58.7 bits (142), Expect = 4e-11
 Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 8/96 (8%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +  G V +VTG   GIGR V    A EGA V           D  E +  +         
Sbjct: 1   RFEGKVVVVTGAAQGIGRGVAERLAGEGARVLLV--------DRSELVHEVLAEILAAGD 52

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                +ADL      + VV   V  + R+D+L+NN 
Sbjct: 53  AAHVHTADLETYAGAQGVVRAAVERFGRVDVLINNV 88

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 58.4 bits (142), Expect = 4e-11
 Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 15/95 (15%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G V LVTGG  GIG  +   F   GATV     +              R  +T D + 
Sbjct: 4   LTGRVVLVTGGTRGIGAGIARAFLAAGATV-VVCGR--------------RAPETVDGRP 48

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               +AD+   +    +VD +V  + R+D+LVNNA
Sbjct: 49  AEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNA 83

Length = 252

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 58.5 bits (142), Expect = 4e-11
 Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 10/113 (8%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            L+G VAL+TGG SG+GRA+   F  EGA VA        D+ A E +  LR        
Sbjct: 1   WLKGEVALITGGGSGLGRALVERFVAEGAKVAVL------DRSA-EKVAELRADFGDAVV 53

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
               +  D+    + +R V   V  + ++D  + NA       S+ DI E +L
Sbjct: 54  ---GVEGDVRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKL 103

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 58.3 bits (141), Expect = 5e-11
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 8/95 (8%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           + G + LVTGG  GIGR +   F + GA V  +       + A+   +   E       +
Sbjct: 4   VAGKIVLVTGGSRGIGRMIAQGFLEAGARVIIS------ARKAEACADAAEELSAYG--E 55

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            +AI ADL  +E  + +V  V    DR+D+LVNNA
Sbjct: 56  CIAIPADLSSEEGIEALVARVAERSDRLDVLVNNA 90

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 58.3 bits (141), Expect = 5e-11
 Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 7/96 (7%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L G  A++TG  +GIG+ +   FA  GA+V  + +         +    + +       
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN-------ADAANHVVDEIQQLGG 60

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              A   D+  ++    + D  ++   ++DILVNNA
Sbjct: 61  QAFACRCDITSEQELSALADFALSKLGKVDILVNNA 96

Length = 255

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 58.2 bits (141), Expect = 6e-11
 Identities = 32/104 (30%), Positives = 43/104 (41%), Gaps = 8/104 (7%)

Query: 37  KLRGMVALVTGGD--SGIGRAVCHCFAQEGATVAFTYVKPQE-----DKDAKETLEMLRE 89
            L   +ALVTG    +GIG AVC   A +G  + FTY  P +         KE + +  E
Sbjct: 2   PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEE 61

Query: 90  AKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
            ++   +       DL       RV   V        IL+NNAA
Sbjct: 62  IESYGVRCEHM-EIDLSQPYAPNRVFYAVSERLGDPSILINNAA 104

Length = 256

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 58.0 bits (141), Expect = 7e-11
 Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 18/110 (16%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           VALVTG  SGIG+A     A +G TV   Y        A   ++ + +  +        +
Sbjct: 5   VALVTGASSGIGKATARRLAAQGYTV---YG-------AARRVDKMEDLASLGVH---PL 51

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNAA-EQYECGSVED--IDESR 148
           S D+  + + K  VD ++    RID+LVNNA    Y  G++ED  IDE+R
Sbjct: 52  SLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSY--GAIEDVPIDEAR 99

Length = 273

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 57.7 bits (140), Expect = 7e-11
 Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 8/95 (8%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+G VAL+TGG  GIG A+      EG  VA T       +D KE  E   E    +  +
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAIT------ARDQKELEEAAAELN--NKGN 55

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            + ++AD+  + + +R VD +V A+  +D+L+ NA
Sbjct: 56  VLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANA 90

Length = 237

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 57.7 bits (139), Expect = 9e-11
 Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 13/115 (11%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G VALVTG   GIGRA+    A +GA VA  Y + ++  D     E +RE ++   K 
Sbjct: 4   LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAAD-----ETIREIESNGGK- 57

Query: 98  PMAISADLGFDENCKRVVDEVVN------AYDRIDILVNNAAEQYECGSVEDIDE 146
              I ADL   +  K++V+++ N          IDILVNNA    + G++E+  E
Sbjct: 58  AFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQ-GTIENTTE 111

Length = 254

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 57.5 bits (139), Expect = 1e-10
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 7/105 (6%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETL-EMLREAKTPDAKDPMA 100
           V L+TGG SG+G A     A+EGA ++   +  +  + AK  L E+  +A+       + 
Sbjct: 5   VVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEV------LL 58

Query: 101 ISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDID 145
           I AD+  +   +  VD  V  + RID   NNA  + +    ED  
Sbjct: 59  IKADVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFG 103

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 57.3 bits (139), Expect = 1e-10
 Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 13/114 (11%)

Query: 34  PSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTP 93
           P   L G V +VTG   GIG  +       GA +A   ++  E       L         
Sbjct: 3   PMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAEL--------G 54

Query: 94  DAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA--AEQYECGSVEDID 145
                + + AD+      +   +E V  +  ID++V NA  A     GSV  +D
Sbjct: 55  GDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASG---GSVAQVD 105

Length = 296

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 57.2 bits (139), Expect = 1e-10
 Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 5/94 (5%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
           G V ++TG +SGIG+      A+ GA V       ++ ++A   +    + +T +AK   
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEI----KKETGNAK-VE 55

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
            I  DL    + ++  +E +  + R+DIL+NNA 
Sbjct: 56  VIQLDLSSLASVRQFAEEFLARFPRLDILINNAG 89

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 56.9 bits (138), Expect = 1e-10
 Identities = 34/96 (35%), Positives = 44/96 (45%), Gaps = 10/96 (10%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G VA+VTGG + IG AV       GA VA        D DA +    +  +    A  
Sbjct: 4   LAGKVAIVTGGATLIGAAVARALVAAGARVAIV------DIDA-DNGAAVAASLGERA-- 54

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
              I+ D+  D   +R V  VV  + R+DILVN A 
Sbjct: 55  -RFIATDITDDAAIERAVATVVARFGRVDILVNLAC 89

Length = 261

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 57.0 bits (138), Expect = 1e-10
 Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 7/113 (6%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L     L+TGG  G+GRA+    A +GA V    + P   +   + +    EA    A  
Sbjct: 4   LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKA-- 61

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA----EQYECGSVEDIDE 146
            + ++ D+      +  +D  V  + R+DILVNNA       +   S+E+ D+
Sbjct: 62  -LGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDD 113

Length = 249

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 57.1 bits (138), Expect = 2e-10
 Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 8/96 (8%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           KL G  AL+TG   GIG  +   FA+ GA +    + P+ +K A E              
Sbjct: 3   KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRC------ 56

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              A+ AD+    +    +        RIDILVNNA
Sbjct: 57  --TAVVADVRDPASVAAAIKRAKEKEGRIDILVNNA 90

Length = 263

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 56.8 bits (138), Expect = 2e-10
 Identities = 34/91 (37%), Positives = 41/91 (45%), Gaps = 15/91 (16%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           VALVTG  SGIGRA     A+ G  V  T   P         +E+L      D  D    
Sbjct: 6   VALVTGASSGIGRATAEKLARAGYRVFGTSRNPA-RAAPIPGVELL----ELDVTD---- 56

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                 D + +  VDEV+    RID+LVNNA
Sbjct: 57  ------DASVQAAVDEVIARAGRIDVLVNNA 81

Length = 270

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 55.3 bits (134), Expect = 2e-10
 Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 4/92 (4%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
             L+TGG  G+G A+    A EGA       +      A E +  L         +    
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGA----EVTVA 57

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
           + D+   +    ++  +  A   +D +V+NA 
Sbjct: 58  ACDVADRDALAALLAALPAALGPLDGVVHNAG 89

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 56.6 bits (137), Expect = 2e-10
 Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 5/95 (5%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G VA+VTGG SGIG A      + GA+VA      +    A+     LRE K P A+ 
Sbjct: 6   LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAE---ARLRE-KFPGAR- 60

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            +A   D+  + +       V   +  +D+LVNNA
Sbjct: 61  LLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNA 95

Length = 265

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 56.9 bits (138), Expect = 3e-10
 Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 9/98 (9%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETL-EMLREAKTPDA 95
            +   V ++TG  +G+GRA    FA+ GA V          ++  E L   +R A     
Sbjct: 5   PIGRQVVVITGASAGVGRATARAFARRGAKVVLL----ARGEEGLEALAAEIRAAGG--- 57

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
            + +A+ AD+   E  +   D        ID  VNNA 
Sbjct: 58  -EALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAM 94

Length = 334

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 56.1 bits (136), Expect = 3e-10
 Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 6/92 (6%)

Query: 41  MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMA 100
            VALVTGG  GIG  +    A  G  +A       +D++   T + LR            
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDR--PDDEELAATQQELRALGVEVI----F 56

Query: 101 ISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             AD+      + ++D    A+ RID LVNNA
Sbjct: 57  FPADVADLSAHEAMLDAAQAAWGRIDCLVNNA 88

Length = 256

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 55.0 bits (132), Expect = 3e-10
 Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 7/96 (7%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           KL G VA+VTGG  GIGR      A++GA V  T +  +  +   E +  L         
Sbjct: 13  KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL-------GG 65

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           + + +S D+    + +RV+   +NA+ RID+L  NA
Sbjct: 66  EALFVSYDMEKQGDWQRVISITLNAFSRIDMLFQNA 101

Length = 169

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 56.3 bits (136), Expect = 3e-10
 Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 10/113 (8%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L+G V LVTGG SG+GRA+   F  EGA VA        DK A    E+  EA   DA 
Sbjct: 2   RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVL------DKSAAGLQEL--EAAHGDAV 53

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
             + +  D+   ++ K  V   V A+ +ID L+ NA       ++ DI + R+
Sbjct: 54  --VGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRI 104

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 55.8 bits (135), Expect = 4e-10
 Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 7/110 (6%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G +ALVTG   GIG A+    AQ+GA V  +  K        +  + + +A       
Sbjct: 6   LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRK-------LDGCQAVADAIVAAGGK 58

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDES 147
             A++  +G  E    +   +   + R+DILVNNAA     G + D D  
Sbjct: 59  AEALACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLG 108

Length = 252

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 55.9 bits (135), Expect = 4e-10
 Identities = 28/105 (26%), Positives = 41/105 (39%), Gaps = 6/105 (5%)

Query: 39  RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDP 98
           +G VALVTG  SGIG  +    A  GA +          +       +  +         
Sbjct: 1   KGKVALVTGSTSGIGLGIARALAAAGANIVLNGFGD-AAEIEAVRAGLAAKHGV----KV 55

Query: 99  MAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVED 143
           +   ADL      + +V      +  +DILVNNA  Q+    +ED
Sbjct: 56  LYHGADLSKPAAIEDMVAYAQRQFGGVDILVNNAGIQH-VAPIED 99

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 55.9 bits (135), Expect = 5e-10
 Identities = 37/116 (31%), Positives = 50/116 (43%), Gaps = 10/116 (8%)

Query: 21  MNPIPQFTSPDYTPSNK---LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQED 77
           M P          P  +   L G   L+TG  SGIG A    FA+ GATV    V  +ED
Sbjct: 18  MRPPISPQLLINRPPRQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVA--VARRED 75

Query: 78  KDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
                 L+ + +  T    D MA+  DL   +    +V +V      +DIL+NNA 
Sbjct: 76  -----LLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAG 126

Length = 293

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 55.6 bits (134), Expect = 5e-10
 Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 8/107 (7%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L   VA++TG  +GIG+A     AQEGA V    +         ET++ ++        
Sbjct: 3   RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEA----VSETVDKIKSN----GG 54

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVED 143
              A   D+  ++  K    E+   + R+D+L NNA      G + +
Sbjct: 55  KAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHE 101

Length = 272

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 55.4 bits (134), Expect = 5e-10
 Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 9/109 (8%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA-KETLEMLREAKTPDAKDPMA 100
           VALVTG    IGRA+    A EG  V   Y + + +    K+ L  LR +          
Sbjct: 2   VALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAV-------L 54

Query: 101 ISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           + ADL     C  +V     A+ R D+LVNNA+  Y    +    E   
Sbjct: 55  VQADLSDFAACADLVAAAFRAFGRCDVLVNNASAFYP-TPLGQGSEDAW 102

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 55.6 bits (134), Expect = 5e-10
 Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 19/97 (19%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREA------KTPDA 95
           VALVTG  SGIG A+     +EG  V   +V  + ++    T++ LREA      +T D 
Sbjct: 5   VALVTGATSGIGLAIARRLGKEGLRV---FVCARGEEGLATTVKELREAGVEADGRTCDV 61

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           +    I A          +V   V  Y  ID+LVNNA
Sbjct: 62  RSVPEIEA----------LVAAAVARYGPIDVLVNNA 88

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 55.2 bits (133), Expect = 6e-10
 Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 7/95 (7%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+G VALVTG  SGIG A     A EGA VA    +        + LE L +    +   
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARR-------VDRLEALADELEAEGGK 53

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            + +  D+  ++     V+  V A  R+DILVNNA
Sbjct: 54  ALVLELDVTDEQQVDAAVERTVEALGRLDILVNNA 88

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 55.1 bits (133), Expect = 7e-10
 Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 8/96 (8%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G  ALVTGG  GIG A+    A  GA V       +  K+  E L   RE        
Sbjct: 4   LEGKTALVTGGTKGIGYAIVEELAGLGAEVYTC---ARNQKELDECLTEWREK----GFK 56

Query: 98  PMAISADLGFDENCKRVVDEVVNAYD-RIDILVNNA 132
                 D+      + ++D V + +  +++ILVNNA
Sbjct: 57  VEGSVCDVSSRSERQELMDTVASHFGGKLNILVNNA 92

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 54.9 bits (133), Expect = 8e-10
 Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 8/98 (8%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEML-REAKTPD 94
             ++G  AL+TG  SGIG  +    A+ G  +    V  +EDK     LE L +E +   
Sbjct: 2   GPMKGKTALITGASSGIGAELAKQLARRGYNLIL--VARREDK-----LEALAKELEDKT 54

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             +   I ADL   E  +R+ DE+      ID+LVNNA
Sbjct: 55  GVEVEVIPADLSDPEALERLEDELKERGGPIDVLVNNA 92

Length = 265

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 54.8 bits (132), Expect = 8e-10
 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 9/96 (9%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L G VA++TGG SGIG A    FA+ GA V    +   +D       E+     +    
Sbjct: 1   RLDGKVAIITGGASGIGEATARLFAKHGARVVIADI--DDDAGQAVAAELGDPDIS---- 54

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               +  D+  + + +  VD  V  + R+DI+ NNA
Sbjct: 55  ---FVHCDVTVEADVRAAVDTAVARFGRLDIMFNNA 87

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 55.4 bits (134), Expect = 8e-10
 Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 19/105 (18%)

Query: 34  PSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRE---- 89
           P     G + +VTG  SGIGR     FA+EGA V  + +   ++  A+ T E++R     
Sbjct: 309 PRGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDI---DEAAAERTAELIRAAGAV 365

Query: 90  --AKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             A   D  D  A+          +   + V   +   DI+VNNA
Sbjct: 366 AHAYRVDVSDADAM----------EAFAEWVRAEHGVPDIVVNNA 400

Length = 582

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 54.6 bits (132), Expect = 1e-09
 Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 7/92 (7%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           + L+TGG SGIGR +   FA+ GA V    +     K A+ET   +R+A           
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINE---KGAEETANNVRKA-GGKVH---YY 53

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
             D+   E       ++      + IL+NNA 
Sbjct: 54  KCDVSKREEVYEAAKKIKKEVGDVTILINNAG 85

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 54.2 bits (131), Expect = 1e-09
 Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 15/103 (14%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKT--PD 94
           KL G   L+TGG SGIG A+   F + G TV  T              E L EAK   P+
Sbjct: 2   KLTGNTVLITGGTSGIGLALARKFLEAGNTVIIT----------GRREERLAEAKKELPN 51

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYE 137
                 I  D+G  E+ + + + +++ Y  +DIL+NNA  Q  
Sbjct: 52  IH---TIVLDVGDAESVEALAEALLSEYPNLDILINNAGIQRP 91

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 54.4 bits (131), Expect = 1e-09
 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 9/91 (9%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           V LVTG   G+G A+   FA+EGA V   Y +     ++ E +      +       +AI
Sbjct: 2   VVLVTGASRGLGAAIARSFAREGARVVVNYYR---STESAEAVAAEAGERA------IAI 52

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            AD+   +  + +++E  N +  +D +VNNA
Sbjct: 53  QADVRDRDQVQAMIEEAKNHFGPVDTIVNNA 83

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 54.5 bits (131), Expect = 1e-09
 Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 10/94 (10%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
           G VA+VTGG  GIG+ +C  F + G  V F  +   +++   +  E           D  
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADI---DEERGADFAEAEGPNLFFVHGD-- 55

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
              AD       K VV  ++    RID+LVNNAA
Sbjct: 56  --VADET---LVKFVVYAMLEKLGRIDVLVNNAA 84

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 54.2 bits (131), Expect = 1e-09
 Identities = 32/93 (34%), Positives = 43/93 (46%), Gaps = 3/93 (3%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
           G   L+TGG SGIG+A+     +EGA V    V   E K  +   E+  EA     K   
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANV--IIVARSESKLEEAVEEIEAEANASGQK-VS 57

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            ISADL   E  ++   + V      D++VN A
Sbjct: 58  YISADLSDYEEVEQAFAQAVEKGGPPDLVVNCA 90

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 53.8 bits (130), Expect = 2e-09
 Identities = 28/90 (31%), Positives = 34/90 (37%), Gaps = 7/90 (7%)

Query: 43  ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS 102
            LVTG   GIG AV    A+ GA VA        D++  E L  L               
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAV------DRNF-EQLLELVADLRRYGYPFATYK 53

Query: 103 ADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            D+        VV  +   Y  ID+LVN A
Sbjct: 54  LDVADSAAVDEVVQRLEREYGPIDVLVNVA 83

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 53.6 bits (129), Expect = 2e-09
 Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 11/99 (11%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAK--TPD 94
           +    VA+VTG   GIG+A     A+EGA+V    V    + +  E     R AK    D
Sbjct: 3   RFDDKVAIVTGAAGGIGQAYAEALAREGASV----VVADINAEGAE-----RVAKQIVAD 53

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
               +A+  D+   ++ K + D  V+A+  ID LVNNAA
Sbjct: 54  GGTAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAA 92

Length = 250

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 53.5 bits (129), Expect = 2e-09
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 9/92 (9%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETL-EMLREAKTPDAKDPMA 100
           VA++TGG SGIG A      ++GA VA   +   E+  A   L  +  + K         
Sbjct: 2   VAIITGGASGIGLATAKLLLKKGAKVA--ILDRNENPGAAAELQAINPKVKA------TF 53

Query: 101 ISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           +  D+   E       + +  + R+DIL+NNA
Sbjct: 54  VQCDVTSWEQLAAAFKKAIEKFGRVDILINNA 85

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 53.6 bits (129), Expect = 3e-09
 Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 6/108 (5%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           V ++TG   GIG A     A+ G  V   Y++ ++  +A      + +A      + +A+
Sbjct: 4   VMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEA------VVQAIRRQGGEALAV 57

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           +AD+  + +  R+ + V     R+D LVNNA        +E +D +RL
Sbjct: 58  AADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARL 105

Length = 248

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 52.9 bits (127), Expect = 3e-09
 Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 10/90 (11%)

Query: 43  ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS 102
           ALVTG   GIG A       EG  V          +D         +    + +  + ++
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGIC------ARDEARLAAAAAQ----ELEGVLGLA 52

Query: 103 ADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            D+  + + +R VD +  A+  +D LVNNA
Sbjct: 53  GDVRDEADVRRAVDAMEEAFGGLDALVNNA 82

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 52.9 bits (127), Expect = 5e-09
 Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 10/106 (9%)

Query: 36  NKLRGMVALVTGGD--SGIGRAVCHCFAQEGATVAFTYVKPQEDK------DAKETLEML 87
           N+L+  VA+VTG     GIG A+C   A+ GA + FTY     DK      D  E +++ 
Sbjct: 2   NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWT-AYDKEMPWGVDQDEQIQLQ 60

Query: 88  REAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
            E      K   ++  DL  ++  K ++++V        ILVNNAA
Sbjct: 61  EELLKNGVK-VSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAA 105

Length = 256

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 52.6 bits (126), Expect = 5e-09
 Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 7/91 (7%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           VA+VTGG +GIG+A+    A+ GA+V    +K +    A+     +++A        + +
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSE---GAEAVAAAIQQA----GGQAIGL 53

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             ++  +++ + VV   V+ +  I ILVNNA
Sbjct: 54  ECNVTSEQDLEAVVKATVSQFGGITILVNNA 84

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 52.9 bits (127), Expect = 5e-09
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 5/98 (5%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           SN+++G   +++GG  GIG+A+ + FAQ G  +AFTY    E  +A +  E L +     
Sbjct: 3   SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVE--EANKIAEDLEQKYGIK 60

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           AK   A   ++   E  K +  ++   +DR+D  ++NA
Sbjct: 61  AK---AYPLNILEPETYKELFKKIDEDFDRVDFFISNA 95

Length = 260

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 52.4 bits (126), Expect = 6e-09
 Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 12/98 (12%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           S +L G VA++TGG SGIG A     A EGATV    + P+  K A + +          
Sbjct: 2   SQRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV---------- 51

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               + +  D+  ++    + D     Y  +DI  NNA
Sbjct: 52  --GGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNA 87

Length = 255

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 1e-08
 Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 7/92 (7%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQE-DKDAKETLEMLREAKTPDAKDPMA 100
           VA+V GG   +G  +CH  A+EG  VA   +  ++    A+E      E           
Sbjct: 4   VAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMA------YG 57

Query: 101 ISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             AD   +++   +   V   + R+D+LV NA
Sbjct: 58  FGADATSEQSVLALSRGVDEIFGRVDLLVYNA 89

Length = 259

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 51.6 bits (124), Expect = 1e-08
 Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 13/115 (11%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
             + L+TG    IG+A C      GA +    +     +  KE L           +  +
Sbjct: 2   DKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELT-----NLYKNRV-I 55

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNAA-------EQYECGSVEDIDES 147
           A+  D+   E+ K +++  +  + RIDIL+NNA         ++E    E  +E 
Sbjct: 56  ALELDITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEV 110

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 51.1 bits (123), Expect = 1e-08
 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 8/93 (8%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMA 100
           VALVTG + GIG  +    A+ G  TV    +  ++ +  +  +E LR            
Sbjct: 2   VALVTGANRGIGFEIVRQLAKSGPGTV---ILTARDVERGQAAVEKLRAEG----LSVRF 54

Query: 101 ISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
              D+  D + +   D V   Y  +DILVNNA 
Sbjct: 55  HQLDVTDDASIEAAADFVEEKYGGLDILVNNAG 87

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 51.4 bits (123), Expect = 2e-08
 Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 21/120 (17%)

Query: 14  QPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK 73
             G           T+   +P  +    V  +TGG  GIGRAV   FA  G  +      
Sbjct: 252 GSGPAS--------TAQAPSPLAE-SPRVVAITGGARGIGRAVADRFAAAGDRLLII--- 299

Query: 74  PQEDKDAKETLEMLREAKTPDAKDP-MAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              D+DA E  + L EA      D  +++ AD+  +   +    ++   + R+D+LVNNA
Sbjct: 300 ---DRDA-EGAKKLAEA----LGDEHLSVQADITDEAAVESAFAQIQARWGRLDVLVNNA 351

Length = 520

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 51.3 bits (123), Expect = 2e-08
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 6/91 (6%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           VA+VTG   GIGRA+    A  G  +A     P +D+  +   E+L   +          
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIA-INDLPDDDQATEVVAEVLAAGRRAIYFQ---- 57

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            AD+G   + + ++D+    + R+D LVNNA
Sbjct: 58  -ADIGELSDHEALLDQAWEDFGRLDCLVNNA 87

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 51.2 bits (123), Expect = 2e-08
 Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 11/105 (10%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRE-AKTPDAKDPMA 100
           +A+VTG  SG G       A++G  V  T   P       E  E L   A   + +  + 
Sbjct: 5   IAIVTGASSGFGLLTTLELAKKGYLVIATMRNP-------EKQENLLSQATQLNLQQNIK 57

Query: 101 ISA-DLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDI 144
           +   D+  D+N       V+    RID+LVNNA      G VE+I
Sbjct: 58  VQQLDVT-DQNSIHNFQLVLKEIGRIDLLVNNAGYANG-GFVEEI 100

Length = 280

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 51.2 bits (123), Expect = 2e-08
 Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 13/101 (12%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK------PQEDKDAKETLEMLREAK 91
             G V LVTG   G+GRA    FA+ GA V    +        +    A + ++   E K
Sbjct: 3   FDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVD---EIK 59

Query: 92  TPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               K   A+ A+    E+ +++V   ++A+ R+DILVNNA
Sbjct: 60  AAGGK---AV-ANYDSVEDGEKIVKTAIDAFGRVDILVNNA 96

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 51.0 bits (122), Expect = 2e-08
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 11/96 (11%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           L G VA+VTG D+G+G+ +    A+ G   V    V+P       ET+E +    T   +
Sbjct: 8   LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP------TETIEQV----TALGR 57

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             ++++ADL   +    +++  V  +  IDILVNNA
Sbjct: 58  RFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNA 93

Length = 253

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 50.8 bits (122), Expect = 2e-08
 Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 11/93 (11%)

Query: 43  ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLR-EAKTPDAKDPMAI 101
            L+TG  SGIGRA+   FA+ G  VA    +        + L+ L+ E   P+    + +
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARR-------TDRLDELKAELLNPNPS--VEV 51

Query: 102 SA-DLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
              D+  +E  + V+ E+      +D+++ NA 
Sbjct: 52  EILDVTDEERNQLVIAELEAELGGLDLVIINAG 84

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 50.9 bits (122), Expect = 2e-08
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 7/95 (7%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L   VA+VTG   G+G A+   FA+ GA V    +  + +    E  E +R A     +
Sbjct: 7   RLDDQVAVVTGAGRGLGAAIALAFAEAGADVL---IAARTESQLDEVAEQIRAA----GR 59

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNN 131
               ++ADL   E    +  + V A+ R+DI+VNN
Sbjct: 60  RAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNN 94

Length = 263

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 50.6 bits (121), Expect = 3e-08
 Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 10/112 (8%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           + L+G V  +TGG  G+GRA     A  GA VA    +                    DA
Sbjct: 3   HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIG-RGAAPLSQTLP------GVPADA 55

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDES 147
                I  DL   +  +R VDEV   + R+D LVN A   +  G++ D D  
Sbjct: 56  LRIGGI--DLVDPQAARRAVDEVNRQFGRLDALVNIAG-AFVWGTIADGDAD 104

Length = 239

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 50.7 bits (122), Expect = 3e-08
 Identities = 37/101 (36%), Positives = 41/101 (40%), Gaps = 21/101 (20%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKD---AKETLEMLR--EAK 91
            LRG V  +TGG  GIG A     A  GA VA        D D   AKET   L      
Sbjct: 2   DLRGKVVAITGGARGIGLATARALAALGARVAIG------DLDEALAKETAAELGLVVGG 55

Query: 92  TPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             D  DP + +A L          D V      ID+LVNNA
Sbjct: 56  PLDVTDPASFAAFL----------DAVEADLGPIDVLVNNA 86

Length = 273

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 50.5 bits (121), Expect = 3e-08
 Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 6/106 (5%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G  ALVTG   GIG       A  GA V   Y   Q+   A + +  +  A    +  
Sbjct: 4   LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNY--RQKAPRANKVVAEIEAAGGRAS-- 59

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVED 143
             A+ ADL  +E+   ++D     +  +D LV NA+   E G  ED
Sbjct: 60  --AVGADLTDEESVAALMDTAREEFGGLDALVLNASGGMESGMDED 103

Length = 248

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 50.4 bits (121), Expect = 3e-08
 Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 16/96 (16%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+G + +VTGG SGIG A+       GA V    +   + +                   
Sbjct: 7   LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHENYQF------------- 53

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
              +  D+   E     V E++  + RID LVNNA 
Sbjct: 54  ---VPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAG 86

Length = 266

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 50.3 bits (120), Expect = 4e-08
 Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 7/95 (7%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+   A+VTGG  GIG A C  FA+EGA VA   +    +++A E +     AK  +A+ 
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDL----NREAAEKVAADIRAKGGNAQ- 55

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             A + D+   ++    V     A   +D+LVNNA
Sbjct: 56  --AFACDITDRDSVDTAVAAAEQALGPVDVLVNNA 88

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 50.0 bits (120), Expect = 4e-08
 Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 12/95 (12%)

Query: 41  MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRE---AKTPDAKD 97
              L+TG  SGIG A    FA+ GA +  T  +        E L+ L +   AK P    
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRR-------AERLQELADELGAKFPVKVL 53

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           P  +  D+   E+ +  ++ +   +  IDILVNNA
Sbjct: 54  P--LQLDVSDRESIEAALENLPEEFRDIDILVNNA 86

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 50.0 bits (120), Expect = 4e-08
 Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 7/121 (5%)

Query: 28  TSPDYTP-SNKLRGMVALVTGG-DSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLE 85
           T+P Y P    L G V LVT    +GIG A      +EGA V    +    ++   ET +
Sbjct: 4   TAPKYVPGHGLLAGKVVLVTAAAGTGIGSATARRALEEGARV---VISDIHERRLGETAD 60

Query: 86  MLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDID 145
            L            A+  D+  +     ++D  V    R+D+LVNNA    +   V+  D
Sbjct: 61  ELAAELGLGR--VEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTD 118

Query: 146 E 146
           +
Sbjct: 119 D 119

Length = 262

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 49.8 bits (119), Expect = 5e-08
 Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 10/108 (9%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G VA+VTG  +GIG A     A+EGA V    V    D  A +            A  
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARV----VVADIDGGAAQ------AVVAQIAGG 50

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDID 145
            +A+  D+  ++    + +  V  +  +D+LVNNA   +   ++ D D
Sbjct: 51  ALALRVDVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTD 98

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 50.1 bits (120), Expect = 5e-08
 Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 6/91 (6%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           VA++TG   GIGRA+    A +G  +         ++ AK T++ + EA      + +A+
Sbjct: 4   VAIITGAAQGIGRAIAERLAADGFNIVL--ADLNLEEAAKSTIQEISEAGY----NAVAV 57

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            AD+   ++ + ++D+ V  +   D++VNNA
Sbjct: 58  GADVTDKDDVEALIDQAVEKFGSFDVMVNNA 88

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 50.2 bits (120), Expect = 6e-08
 Identities = 32/101 (31%), Positives = 42/101 (41%), Gaps = 9/101 (8%)

Query: 34  PSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREA--K 91
               L   VA VTGG  GIGR      A EGA V         D +  E  E +      
Sbjct: 408 KEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLA------DLNL-EAAEAVAAEING 460

Query: 92  TPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              A   +A+  D+  ++  K    +V  AY  +DI+VNNA
Sbjct: 461 QFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNA 501

Length = 676

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 49.9 bits (120), Expect = 6e-08
 Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 7/95 (7%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+G VA++TGG   +G A+    A+ GA VA   +  +  + A+  +  ++ A      +
Sbjct: 8   LKGKVAVITGGGGVLGGAMAKELARAGAKVA---ILDRNQEKAEAVVAEIKAA----GGE 60

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            +A+ AD+   E+ ++   +++  +   DIL+N A
Sbjct: 61  ALAVKADVLDKESLEQARQQILEDFGPCDILINGA 95

Length = 278

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 50.1 bits (120), Expect = 6e-08
 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 11/96 (11%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G  A+VTGG SG+G       AQ GA V     +P  D  A+E L  +   +      
Sbjct: 24  LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRP--DV-AREALAGIDGVEV----V 76

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
            +    DL   E+ +   +  +++  RIDIL+NNA 
Sbjct: 77  ML----DLADLESVRAFAERFLDSGRRIDILINNAG 108

Length = 315

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 49.5 bits (118), Expect = 6e-08
 Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 6/108 (5%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           +ALVTGG  GIGRA     AQEG TVA  Y   Q    A+E + ++ +A          +
Sbjct: 3   IALVTGGSRGIGRATALLLAQEGYTVAVNYQ--QNLHAAQEVVNLITQA----GGKAFVL 56

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
            AD+  +     +   +    + +  LVNNA   +   +VE++   R+
Sbjct: 57  QADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERI 104

Length = 247

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 49.6 bits (119), Expect = 7e-08
 Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 5/93 (5%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
           G VA+VTG ++G+G       A +GA V        + K A   +     A TP A D  
Sbjct: 16  GRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARIT----AATPGA-DVT 70

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               DL    + +   D +  AY RID+L+NNA
Sbjct: 71  LQELDLTSLASVRAAADALRAAYPRIDLLINNA 103

Length = 306

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 49.5 bits (119), Expect = 7e-08
 Identities = 24/96 (25%), Positives = 33/96 (34%), Gaps = 18/96 (18%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATV-AFTYVKPQEDKDAKETLEMLREAKTPDAK 96
             G    VTG   GIG AV   F + GA V  F       D+      +        D  
Sbjct: 6   FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGF-------DQAFLTQEDYPFATFVLDVS 58

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           D  A++           V   ++     +D+LVN A
Sbjct: 59  DAAAVAQ----------VCQRLLAETGPLDVLVNAA 84

Length = 252

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 49.1 bits (118), Expect = 8e-08
 Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 8/87 (9%)

Query: 47  GGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLG 106
             D+ I  A+    A+EGA V  T   P          E+ +E           I  D+ 
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPA--LRMGAVDELAKELPAD------VIPLDVT 54

Query: 107 FDENCKRVVDEVVNAYDRIDILVNNAA 133
            DE+   + ++V     +ID LV++ A
Sbjct: 55  SDEDIDELFEKVKEDGGKIDFLVHSIA 81

Length = 239

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 49.2 bits (118), Expect = 9e-08
 Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 17/119 (14%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
              G   +V GG SGI   +   FA+ GA VA      ++   A   L            
Sbjct: 6   DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQL-------QQAGP 58

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYEC----------GSVEDID 145
           + + +SAD+      +    ++ + +  ID+LV+ AA  +             +V DID
Sbjct: 59  EGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDID 117

Length = 264

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 49.0 bits (117), Expect = 1e-07
 Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 6/108 (5%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           V L+TG   GIGRA     A  G +V   Y +  +   A+ET + +R A          +
Sbjct: 4   VVLITGASRGIGRATAVLAAARGWSVGINYAR--DAAAAEETADAVRAA----GGRACVV 57

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           + D+  + +   + D V +A+ R+D LVNNA        + D+D +RL
Sbjct: 58  AGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARL 105

Length = 248

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 49.0 bits (117), Expect = 1e-07
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 15/103 (14%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           K  G   L+TGG SGIG A+   F + G TV                 E L EAK   A+
Sbjct: 2   KTTGNTILITGGASGIGLALAKRFLELGNTVIIC----------GRNEERLAEAK---AE 48

Query: 97  DP--MAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYE 137
           +P       D+   ++ + +V+ +   Y  +++L+NNA  Q  
Sbjct: 49  NPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRN 91

Length = 245

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 48.1 bits (115), Expect = 2e-07
 Identities = 32/93 (34%), Positives = 43/93 (46%), Gaps = 9/93 (9%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA-KETLEMLREAKTPDAKDPMA 100
           V ++TG  SGIGRA    FA+ GA V    V      +A  E    +RE       + +A
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKV----VLAARSAEALHELAREVRELGG----EAIA 53

Query: 101 ISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
           + AD+      +R  D  V  + RID  VNNA 
Sbjct: 54  VVADVADAAQVERAADTAVERFGRIDTWVNNAG 86

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 48.2 bits (115), Expect = 2e-07
 Identities = 35/97 (36%), Positives = 41/97 (42%), Gaps = 15/97 (15%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
               G   LV GG  GIG A+   F  +GA V FTY      KDA E L     A+   A
Sbjct: 2   GAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAG---SKDAAERL-----AQETGA 53

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                 SAD       +  V +VV     +DILV NA
Sbjct: 54  TAVQTDSAD-------RDAVIDVVRKSGALDILVVNA 83

Length = 237

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 6/100 (6%)

Query: 33  TPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKT 92
            P +      ALVTG    IGRA+    A  G  VA  Y + ++  +A+     +R    
Sbjct: 2   PPMSMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRD--EAEALAAEIRAL-- 57

Query: 93  PDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              +  +A+ ADL  +   + +V     A   I +LVNNA
Sbjct: 58  --GRRAVALQADLADEAEVRALVARASAALGPITLLVNNA 95

Length = 258

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.1 bits (115), Expect = 2e-07
 Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 13/98 (13%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLR---EAKTPD 94
           L+G  AL+TG   GIGRAV    A+EG  V       +  K   E +E         T D
Sbjct: 5   LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATAD 64

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             D   ++A           ++++ N    IDIL+NNA
Sbjct: 65  VSDYEEVTA----------AIEQLKNELGSIDILINNA 92

Length = 239

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 47.8 bits (114), Expect = 2e-07
 Identities = 35/103 (33%), Positives = 44/103 (42%), Gaps = 15/103 (14%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G  ALVTG   GIG A+    AQ GA V      P +   A E+L           K 
Sbjct: 8   LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESL-----------KG 56

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDR----IDILVNNAAEQY 136
               +  L FD      V   ++A++     IDILVNNA  Q+
Sbjct: 57  QGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQF 99

Length = 255

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 48.1 bits (115), Expect = 2e-07
 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 17/100 (17%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+G +AL+TG   GIG A+   +A+ GAT+ F  +  +        L   RE        
Sbjct: 8   LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKG---LAAYREL------- 57

Query: 98  PMAISA-----DLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              I A     D+  ++  + +V ++      IDILVNNA
Sbjct: 58  --GIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNA 95

Length = 265

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 47.8 bits (114), Expect = 3e-07
 Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 6/91 (6%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           +ALVTG   GIG A+      +G  V  TY    +   AK+  E      T D       
Sbjct: 4   IALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDC--AKDWFE--EYGFTEDQVR--LK 57

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             D+   E C   + E+      +DILVNNA
Sbjct: 58  ELDVTDTEECAEALAEIEEEEGPVDILVNNA 88

Length = 245

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 48.0 bits (115), Expect = 3e-07
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 9/92 (9%)

Query: 40  GMVALVTG--GDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           G   L+TG   D  I   +     + GA +AFTY      K  ++  E L E+       
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESA------ 54

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILV 129
            + +  D+  DE  K +  EV   + ++D LV
Sbjct: 55  -LVLPCDVSNDEEIKELFAEVKKDWGKLDGLV 85

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 48.0 bits (115), Expect = 3e-07
 Identities = 28/114 (24%), Positives = 41/114 (35%), Gaps = 12/114 (10%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKT-PDA 95
            L+    L+TG   GIG+A+    A  GA +              E LE L      P  
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNA-------EKLEALAARLPYPGR 54

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
                + ADL  +   +  V         I++L+NNA        +ED D   +
Sbjct: 55  HRW--VVADLTSEAG-REAVLARAREMGGINVLINNAG-VNHFALLEDQDPEAI 104

Length = 263

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 47.4 bits (113), Expect = 4e-07
 Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 7/95 (7%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G VALVTG   G+G  +    A  GA V    V  +     +  +  LR A    A +
Sbjct: 9   LAGQVALVTGSARGLGFEIARALAGAGAHVL---VNGRNAATLEAAVAALRAAGG--AAE 63

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            +A   D+  +E        +   + R+DILVNN 
Sbjct: 64  ALAF--DIADEEAVAAAFARIDAEHGRLDILVNNV 96

Length = 256

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 47.5 bits (113), Expect = 4e-07
 Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 11/116 (9%)

Query: 33  TPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETL--EMLREA 90
           T  + L   VALVT    GIG A+    AQ+GA V  +  K Q    A  TL  E L   
Sbjct: 3   TRRDPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVT 62

Query: 91  KTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
            T            +G  E+ +R+V   VN +  +DILV+NAA     G++ D  E
Sbjct: 63  GT---------VCHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTE 109

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 47.4 bits (112), Expect = 4e-07
 Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 20/106 (18%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+G VALVTG   GIGRA+    A +GA VA  Y   +E  +A+ET+  ++     +   
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKE--EAEETVYEIQS----NGGS 55

Query: 98  PMAISADLGFDENCKRVVDEVVNAYD----------RIDILVNNAA 133
             +I A+L         V+ + ++ D          + DIL+NNA 
Sbjct: 56  AFSIGANL----ESLHGVEALYSSLDNELQNRTGSTKFDILINNAG 97

Length = 252

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 47.5 bits (113), Expect = 4e-07
 Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 11/97 (11%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQE--DKDAKETLEMLREAKTPDA 95
           L+  VA++TGG   +G A+    AQ GA VA      QE  DK AKE   +   A     
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRN-QEKGDKVAKEITALGGRAI---- 57

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               A++AD+    + +R  +E+V  +  +DIL+N A
Sbjct: 58  ----ALAADVLDRASLERAREEIVAQFGTVDILINGA 90

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 47.1 bits (112), Expect = 4e-07
 Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 16/93 (17%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
           G VAL+T    GIGRA+   FA+EGA V  T +  ++ K+ +    +    +  D  D  
Sbjct: 2   GKVALITAAAQGIGRAIALAFAREGANVIATDINEEKLKELERGPGI--TTRVLDVTD-- 57

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                       K  V  +     RID+L N A
Sbjct: 58  ------------KEQVAALAKEEGRIDVLFNCA 78

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 47.3 bits (113), Expect = 4e-07
 Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 7/90 (7%)

Query: 43  ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS 102
           AL+TG  SGIG+A    FA+ G  +A   V   +D      LE L            A S
Sbjct: 9   ALITGASSGIGKATALAFAKAGWDLAL--VARSQDA-----LEALAAELRSTGVKAAAYS 61

Query: 103 ADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            DL   E     + E++  +   D+L+NNA
Sbjct: 62  IDLSNPEAIAPGIAELLEQFGCPDVLINNA 91

Length = 241

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 47.3 bits (113), Expect = 4e-07
 Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 13/94 (13%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
           G+VA+VTGG SG+G A       +GA V    + P    +    L        P      
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVILDL-PNSPGETVAKLG-DNCRFVP------ 53

Query: 100 AISADLGFDENC-KRVVDEVVNAYDRIDILVNNA 132
               D+   E   K  +      + R+DI+VN A
Sbjct: 54  ---VDVT-SEKDVKAALALAKAKFGRLDIVVNCA 83

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 47.0 bits (112), Expect = 5e-07
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           VALVTG   GIG A+     ++G  VA      +  + A + L         D    +A+
Sbjct: 4   VALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLS-------KDGGKAIAV 56

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            AD+   +     V +VV+ +  ++++VNNA
Sbjct: 57  KADVSDRDQVFAAVRQVVDTFGDLNVVVNNA 87

Length = 256

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 47.2 bits (112), Expect = 5e-07
 Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 9/95 (9%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G VA++TG ++G+G+ +    A+ GA +    V   E  + +  +E L        + 
Sbjct: 6   LNGKVAIITGCNTGLGQGMAIGLAKAGADI--VGVGVAEAPETQAQVEAL-------GRK 56

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              I+ADL   ++   +V + V     IDIL+NNA
Sbjct: 57  FHFITADLIQQKDIDSIVSQAVEVMGHIDILINNA 91

Length = 251

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 47.1 bits (112), Expect = 5e-07
 Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 7/96 (7%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G +ALVTG   GIGR +     + GATV  T       +     L    E        
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYIT------GRTILPQLPGTAEEIEARGGK 54

Query: 98  PMAISADLGFDENCKRVVDEVVNAYD-RIDILVNNA 132
            + +  D   D+  + + + V      R+DILVNNA
Sbjct: 55  CIPVRCDHSDDDEVEALFERVAREQQGRLDILVNNA 90

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 47.3 bits (113), Expect = 5e-07
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 6/90 (6%)

Query: 43  ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS 102
             VTG  SGIGRA     A +GA +  T      D+DA    + + +A+      P   +
Sbjct: 3   CFVTGAASGIGRATALRLAAQGAELFLT------DRDADGLAQTVADARALGGTVPEHRA 56

Query: 103 ADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            D+   +       ++  A+  +D+++N A
Sbjct: 57  LDISDYDAVAAFAADIHAAHGSMDVVMNIA 86

Length = 272

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 47.1 bits (112), Expect = 5e-07
 Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 6/96 (6%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            L G VA VTG  SGIG+ +    AQ GA VA      + D    ET E +  A     +
Sbjct: 5   DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVAL--FDLRTDDGLAETAEHIEAA----GR 58

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             + I+AD+    + +  V         + + VN A
Sbjct: 59  RAIQIAADVTSKADLRAAVARTEAELGALTLAVNAA 94

Length = 254

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 47.1 bits (113), Expect = 5e-07
 Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 10/95 (10%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G VALVTG   GIG A+    A++GA V    V P     A E L     A   +   
Sbjct: 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDV-PA----AGEAL-----AAVANRVG 257

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             A++ D+   +   R+ + +   +  +DI+V+NA
Sbjct: 258 GTALALDITAPDAPARIAEHLAERHGGLDIVVHNA 292

Length = 450

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 47.1 bits (112), Expect = 6e-07
 Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 13/91 (14%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           V L+TG  SGIGRA+   F   G  V  T  K +   D +        A   D  D  A+
Sbjct: 3   VVLITGCSSGIGRALADAFKAAGYEVWATARKAE---DVEALAAAGFTAVQLDVNDGAAL 59

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                      R+ +E+   +  +D+L+NNA
Sbjct: 60  ----------ARLAEELEAEHGGLDVLINNA 80

Length = 274

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 46.7 bits (111), Expect = 6e-07
 Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 5/95 (5%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
            L+G V L+ GG   +G  +    A +GA  VA  Y       DA+ET+  ++ A     
Sbjct: 5   SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGA--- 61

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVN 130
              +A  ADL      +++ D+   A+ R DI +N
Sbjct: 62  -KAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAIN 95

Length = 257

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 46.8 bits (112), Expect = 6e-07
 Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 15/108 (13%)

Query: 44  LVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRE-AKTPDAKDPMAIS 102
           L+TG  SG GRA+       G  V  T V+ +  +   E L   R  A+  D  D  AI 
Sbjct: 8   LITGVSSGFGRALAQAALAAGHRVVGT-VRSEAARADFEALHPDRALARLLDVTDFDAID 66

Query: 103 ADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVE--DIDESR 148
           A          VV +    +  ID+LVNNA   +E G++E   + E R
Sbjct: 67  A----------VVADAEATFGPIDVLVNNAGYGHE-GAIEESPLAEMR 103

Length = 277

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 46.7 bits (111), Expect = 7e-07
 Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 7/104 (6%)

Query: 29  SPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLR 88
           SP  T +  L G VA+VTG  +G+GRA     A+ GATV    V      DA + L+ +R
Sbjct: 1   SPRTTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASAL--DASDVLDEIR 58

Query: 89  EAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            A        +A++ D+        +V         +DI+VNNA
Sbjct: 59  AA----GAKAVAVAGDISQRATADELV-ATAVGLGGLDIVVNNA 97

Length = 306

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 46.4 bits (111), Expect = 8e-07
 Identities = 27/114 (23%), Positives = 39/114 (34%), Gaps = 38/114 (33%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKT--PDA 95
           L G    +TG   GIG A+    A++GA +                      AKT  P  
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANIVIA-------------------AKTAEPHP 44

Query: 96  KDP-----------------MAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           K P                 + +  D+  ++     V + V  +  IDI VNNA
Sbjct: 45  KLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNA 98

Length = 273

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 46.1 bits (110), Expect = 1e-06
 Identities = 23/96 (23%), Positives = 49/96 (51%), Gaps = 7/96 (7%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            L+  V ++TGG  G+GRA+    AQ+GA +A   +   ++K  +E +       T    
Sbjct: 2   DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDL--NQEK-LEEAVAECGALGT---- 54

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           +    +A++  +E+ +    ++   + +++ L+NNA
Sbjct: 55  EVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNA 90

Length = 253

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 46.1 bits (110), Expect = 1e-06
 Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 10/94 (10%)

Query: 38  LRGMVALVTG--GDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           L G   L+ G   +  I   +    A++GA +AFTY   Q ++  K   E+       + 
Sbjct: 4   LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTY---QGERLEKRVEELA-----EEL 55

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILV 129
              + +  D+  DE+   +   +   + ++D LV
Sbjct: 56  GSDLVLPCDVTNDESIDALFATIKKKWGKLDGLV 89

Length = 259

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 45.7 bits (108), Expect = 1e-06
 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 7/100 (7%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           + L G  A+VTG  SGIG+ +    A+ GA VA   +       A    + + +A     
Sbjct: 3   SNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLN---QDGANAVADEINKAGGKAI 59

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQ 135
              M    D+  ++     +D+V   +  +DILV+NA  Q
Sbjct: 60  GVAM----DVTNEDAVNAGIDKVAERFGSVDILVSNAGIQ 95

Length = 262

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 45.5 bits (108), Expect = 2e-06
 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 6/93 (6%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
             VA+V GG   +G  +CH  A+ G  VA        D +++   ++  E      +   
Sbjct: 2   NQVAVVIGGGQTLGEFLCHGLAEAGYDVAVA------DINSENAEKVADEINAEYGEKAY 55

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              AD   +++   +   V   + R+D+LV +A
Sbjct: 56  GFGADATNEQSVIALSKGVDEIFKRVDLLVYSA 88

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 45.2 bits (107), Expect = 2e-06
 Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 17/97 (17%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATV-AFTYVKPQEDKDAKETLEMLREAKTPDAK 96
             G  ALVTG   GIGRA     A+ GA V A +  +   D   +E          P  +
Sbjct: 5   FAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRE---------CPGIE 55

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
               +  DL   +      +E + +   +D+LVNNAA
Sbjct: 56  ---PVCVDLSDWD----ATEEALGSVGPVDLLVNNAA 85

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 45.0 bits (107), Expect = 3e-06
 Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 10/101 (9%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKD------AKETLEMLREAK 91
           L G V +VTG   GIGRA    FA EGA V    +    D        A+  ++ +  A 
Sbjct: 4   LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA- 62

Query: 92  TPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                + +A   D+   +    +VD  V  +  +D+LVNNA
Sbjct: 63  ---GGEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNA 100

Length = 286

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 44.8 bits (106), Expect = 3e-06
 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 8/108 (7%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           VALVTGG  GIG+ +    A++G  VA   V    ++ AKET + + +A        +A 
Sbjct: 2   VALVTGGAQGIGKGIAERLAKDGFAVA---VADLNEETAKETAKEINQAGG----KAVAY 54

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
             D+   +     +D+    +   D++VNNA        + +I E  L
Sbjct: 55  KLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAP-ITPILEITEEEL 101

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 44.7 bits (106), Expect = 3e-06
 Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 16/93 (17%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
           G   LVTG  SGIGRA     AQ GA V          ++A     +  E       +P 
Sbjct: 9   GKSVLVTGASSGIGRACAVALAQRGARVVAA------ARNAAALDRLAGET----GCEP- 57

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            +  D+G D      +   + A    D LVN A
Sbjct: 58  -LRLDVGDDA----AIRAALAAAGAFDGLVNCA 85

Length = 245

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 44.4 bits (105), Expect = 4e-06
 Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 14/105 (13%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQED---------KDAKETLEML 87
           L G VA +TG   G GRA     A EGA  +A     P  D         +D  ET  ++
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60

Query: 88  REAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                   +  +A  AD+      + VV++ V  + R+D++V NA
Sbjct: 61  EAL----GRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANA 101

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 44.5 bits (105), Expect = 4e-06
 Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 8/110 (7%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L   + LVTG   GIGR     +A+ GATV       ++ +   + +      +      
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQ------ 55

Query: 98  PMAISADL--GFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDID 145
           P     DL     ENC+++   +   Y R+D +++NA    +   + + +
Sbjct: 56  PQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQN 105

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 44.2 bits (105), Expect = 5e-06
 Identities = 33/105 (31%), Positives = 45/105 (42%), Gaps = 9/105 (8%)

Query: 33  TPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYV------KPQEDKDAKETLEM 86
                LRG VALV G   G GR +       GATV   YV        + + D  ET+E 
Sbjct: 1   PMMKPLRGKVALVAGATRGAGRGIAVELGAAGATV---YVTGRSTRARRSEYDRPETIEE 57

Query: 87  LREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNN 131
             E  T      +A+  D    E  + +V+ +     R+DILVN+
Sbjct: 58  TAELVTAAGGRGIAVQVDHLVPEQVRALVERIDREQGRLDILVND 102

Length = 305

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 43.4 bits (102), Expect = 1e-05
 Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 9/99 (9%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
            A+VTG    IG ++     QEG  V   Y +      A      L   +   A   +  
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAA--ASTLAAELNARRPNSA---VTC 57

Query: 102 SADLG----FDENCKRVVDEVVNAYDRIDILVNNAAEQY 136
            ADL         C+ ++D    A+ R D+LVNNA+  Y
Sbjct: 58  QADLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFY 96

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 42.8 bits (101), Expect = 1e-05
 Identities = 30/93 (32%), Positives = 36/93 (38%), Gaps = 20/93 (21%)

Query: 43  ALVTGGDSGIGRAVCHCFAQEGATVA---FTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
            +VTG   GIGRAV     Q GATV      +V   E  D      +       D  D  
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRLTPL-------DVADAA 53

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           A+       E C R++ E       ID LVN A
Sbjct: 54  AV------REVCSRLLAEH----GPIDALVNCA 76

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 12/104 (11%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           V ++TG   GIGRA+     + G+      +   E+   +E  E LR            +
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEE-PLQELKEELRPGLRVTT-----V 54

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDID 145
            ADL      +++++ +       D+L+NNA      GS+  + 
Sbjct: 55  KADLSDAAGVEQLLEAIRKLDGERDLLINNA------GSLGPVS 92

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 1e-05
 Identities = 35/121 (28%), Positives = 47/121 (38%), Gaps = 29/121 (23%)

Query: 21  MNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA 80
           M      T PD      L G  A+VTG   G+G  +    A  GA V        + + A
Sbjct: 1   MRKPLDITVPD------LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAA 54

Query: 81  KETLEMLREAKTPDAK---DPMAIS-----ADLGFDENCKRVVDEVVNAYDR-IDILVNN 131
              +  +R A  PDAK     + +S     A LG          E + A  R I +L+NN
Sbjct: 55  ---VAAIRTA-VPDAKLSLRALDLSSLASVAALG----------EQLRAEGRPIHLLINN 100

Query: 132 A 132
           A
Sbjct: 101 A 101

Length = 313

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 7/89 (7%)

Query: 44  LVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISA 103
           ++TG  SG+GRA+   +A+EG  +A   V    ++  +ETL++LREA      D      
Sbjct: 4   MITGAASGLGRAIALRWAREGWRLALADV---NEEGGEETLKLLREA----GGDGFYQRC 56

Query: 104 DLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           D+        +       +  ID++VNNA
Sbjct: 57  DVRDYSQLTALAQACEEKWGGIDVIVNNA 85

Length = 270

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 42.8 bits (101), Expect = 2e-05
 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 5/103 (4%)

Query: 43  ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS 102
           A +TG   G+GRA+    A++GA V  T +      DA    E+        A    A  
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAF-AAEINAAHGEGVA---FAAV 57

Query: 103 ADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDID 145
            D+  +   + ++ +  +A   + +LVNNA      G++E I+
Sbjct: 58  QDVTDEAQWQALLAQAADAMGGLSVLVNNAGVG-SFGAIEQIE 99

Length = 251

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 9/99 (9%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA-KETLEMLREAKTP 93
              L G V ++TG  SGIG+A    FA+ GA +    V    D++A +   E  R     
Sbjct: 2   MGPLHGAVVVITGASSGIGQATAEAFARRGARL----VLAARDEEALQAVAEECRALGA- 56

Query: 94  DAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              + + +  D+   +  K +  +  +   RID+ VNN 
Sbjct: 57  ---EVLVVPTDVTDADQVKALATQAASFGGRIDVWVNNV 92

Length = 330

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 41.9 bits (98), Expect = 3e-05
 Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 7/96 (7%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G  AL+TG  +GIG+ V   + + GA VA          DA   LE L +        
Sbjct: 7   LHGKRALITGASTGIGKRVALAYVEAGAQVAIA----ARHLDA---LEKLADEIGTSGGK 59

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
            + +  D+   +    ++D+V      IDI V NA 
Sbjct: 60  VVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAG 95

Length = 253

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 41.4 bits (98), Expect = 5e-05
 Identities = 34/123 (27%), Positives = 51/123 (41%), Gaps = 15/123 (12%)

Query: 31  DYTPS-NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAF---TYVKPQEDKDAKETLEM 86
            Y P  + L+  + LVTG   GIGR     +A+ GATV     T  K +   D  E    
Sbjct: 2   HYQPKPDLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG- 60

Query: 87  LREAKTPDAKDPMAISADL--GFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDI 144
                      P  I  DL     +N +++ D +   + R+D +++NA    E G +E  
Sbjct: 61  --------GPQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQ 112

Query: 145 DES 147
           D  
Sbjct: 113 DPE 115

Length = 247

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 40.9 bits (96), Expect = 8e-05
 Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 12/90 (13%)

Query: 44  LVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETL-EMLREAKTPDAKDPMAIS 102
            +TG  SG GR +       G  VA T  +P    D K    + L      D  D  A+ 
Sbjct: 6   FITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVL-QLDVTDSAAV- 63

Query: 103 ADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                    + VVD    A  RID++V+NA
Sbjct: 64  ---------RAVVDRAFAALGRIDVVVSNA 84

Length = 276

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 40.5 bits (95), Expect = 9e-05
 Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 14/99 (14%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETL--EMLREAKTPD 94
           ++     LVTGG  G+G A+   FA+EGA V   Y    + +DA E L  E+   A    
Sbjct: 2   QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNY---HQSEDAAEALADELGDRA---- 54

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDR-IDILVNNA 132
               +A+ AD+   E  + +       + + I  +VNNA
Sbjct: 55  ----IALQADVTDREQVQAMFATATEHFGKPITTVVNNA 89

Length = 253

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 40.5 bits (95), Expect = 1e-04
 Identities = 22/91 (24%), Positives = 31/91 (34%), Gaps = 9/91 (9%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
            ALVTG   GIG+A+   F   G  V         D DA                  + +
Sbjct: 4   TALVTGAAGGIGQALARRFLAAGDRVLAL------DIDAAALAAFADALGDARF---VPV 54

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           + DL    +    +         +D+LV NA
Sbjct: 55  ACDLTDAASLAAALANAAAERGPVDVLVANA 85

Length = 257

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 34/97 (35%), Positives = 43/97 (44%), Gaps = 15/97 (15%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQE--DKDAKETLE-MLREAKTPDAK 96
           G  A+VTG   GIG+A     A+ G  V     + QE  D  AKE  E    E KT    
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNV-ILISRTQEKLDAVAKEIEEKYGVETKT---- 55

Query: 97  DPMAISADLGF-DENCKRVVDEVVNAYDRIDILVNNA 132
               I+AD    D+  +R+  E+      I ILVNN 
Sbjct: 56  ----IAADFSAGDDIYERIEKELEGL--DIGILVNNV 86

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 5/95 (5%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+G   L+TG    IG A+     + G  V    +  +   +  E+L    ++K      
Sbjct: 2   LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLS--- 58

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              +  D+   E+ +  + +    Y +ID  VN A
Sbjct: 59  --LVELDITDQESLEEFLSKSAEKYGKIDGAVNCA 91

Length = 256

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 30/116 (25%), Positives = 42/116 (36%), Gaps = 12/116 (10%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLR-EAKTPDA 95
           + RG VALVTG   GIG AV     Q G  V              + +E L  E ++   
Sbjct: 3   RWRGRVALVTGASVGIGAAVARALVQHGMKVVGC-------ARRVDKIEALAAECQSAGY 55

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA----AEQYECGSVEDIDES 147
                   DL  +E    +   +   +  +D+ +NNA     E    G  E   E 
Sbjct: 56  PTLFPYQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPEPLLSGKTEGWKEM 111

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 8/119 (6%)

Query: 34  PSNKLR--GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAK 91
           P+  L+  G  ALVTG   GIG+      A++G  +      P + KD  ++++  + +K
Sbjct: 45  PAKNLKKYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQS-KYSK 103

Query: 92  TPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGS-VEDIDESRL 149
           T      +  S D+  DE  KR + E +   D + +L+NN    Y       ++DE  L
Sbjct: 104 TQIKTVVVDFSGDI--DEGVKR-IKETIEGLD-VGVLINNVGVSYPYARFFHEVDEELL 158

Length = 320

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 21/97 (21%), Positives = 36/97 (37%), Gaps = 7/97 (7%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
               G VA++TG  SG G A     A  G  +    V  Q+D      L+          
Sbjct: 2   KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADV--QQD-----ALDRAVAELRAQG 54

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            + + +  D+      + + D  +  +  + +L NNA
Sbjct: 55  AEVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNA 91

Length = 287

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 31/95 (32%), Positives = 40/95 (42%), Gaps = 7/95 (7%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G VALVTG  SG+G       AQ GA V     +        E L+ LR     +   
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRR-------VERLKELRAEIEAEGGA 59

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              +S D+   ++ K  V         IDILVNN+
Sbjct: 60  AHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNS 94

Length = 258

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 31/109 (28%), Positives = 38/109 (34%), Gaps = 21/109 (19%)

Query: 44  LVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTP-----DAKDP 98
            +TG  SGIGRA    FA EG  V    +    ++     L     A        D  D 
Sbjct: 5   FITGAASGIGRATALLFAAEGWRVGAYDI----NEAGLAALAAELGAGNAWTGALDVTDR 60

Query: 99  MAISADLGFDENCKRVVDEVVNAYD-RIDILVNNAAEQYECGSVEDIDE 146
            A  A L           +   A   R+D+L NNA      G  EDI  
Sbjct: 61  AAWDAAL----------ADFAAATGGRLDVLFNNAGILRG-GPFEDIPL 98

Length = 260

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 17/91 (18%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           V LV GG   +G AV   F   G  VA   +   E+ DA   +         D+      
Sbjct: 3   VVLVYGGRGALGSAVVQAFKSRGWWVASIDLAENEEADASIIV--------LDSDS---- 50

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                F E  K+VV  V     ++D L+  A
Sbjct: 51  -----FTEQAKQVVASVARLSGKVDALICVA 76

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 38.6 bits (90), Expect = 4e-04
 Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 9/110 (8%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L+G    + G   G+G AV +   +EGA V        + K  K+TL            
Sbjct: 2   RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIH----- 56

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
               +  D+   E+ + V+++     + ID LV      Y   +VE+   
Sbjct: 57  ---YVVGDVSSTESARNVIEKAAKVLNAIDGLVVTVG-GYVEDTVEEFSG 102

Length = 238

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 38.6 bits (90), Expect = 5e-04
 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 8/92 (8%)

Query: 41  MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMA 100
           M  LVT    GIG  V     ++GA V  +    +  + A + L+   E          A
Sbjct: 1   MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVY--------A 52

Query: 101 ISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           + ADL   ++ K +V E       ID LV NA
Sbjct: 53  VKADLSDKDDLKNLVKEAWELLGGIDALVWNA 84

Length = 259

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 38.2 bits (89), Expect = 5e-04
 Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 5/102 (4%)

Query: 44  LVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISA 103
           LVTGG SGIG+ V       GA V      P +   A E +E L+ A     +      A
Sbjct: 11  LVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYE-----PA 65

Query: 104 DLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDID 145
           D+  ++   R VD     + R+  +V+ A      G +  ID
Sbjct: 66  DVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQID 107

Length = 276

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 38.1 bits (88), Expect = 6e-04
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 6/91 (6%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           +A VTGG  GIG ++C    ++G  V      P   +  K  LE  +        D +A 
Sbjct: 5   IAYVTGGMGGIGTSICQRLHKDGFKVV-AGCGPNSPRRVK-WLEDQKAL----GFDFIAS 58

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             ++G  ++ K   D+V      ID+LVNNA
Sbjct: 59  EGNVGDWDSTKAAFDKVKAEVGEIDVLVNNA 89

Length = 246

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 38.2 bits (89), Expect = 7e-04
 Identities = 25/96 (26%), Positives = 41/96 (42%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G    +TG   GIG+A+    A++GA V       +       T+    E        
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
            +    D+  ++  +  V++ V  +  IDILVNNA+
Sbjct: 61  ALPCIVDIRDEDQVRAAVEKAVEKFGGIDILVNNAS 96

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 37.8 bits (88), Expect = 7e-04
 Identities = 26/116 (22%), Positives = 40/116 (34%), Gaps = 21/116 (18%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAK-TP--- 93
           ++    LVTG + GIG+A        GA   +  V+   D  +   L      K  P   
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVR---DPGSAAHLVAKYGDKVVPLRL 57

Query: 94  DAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           D  DP +I A                     +D+++NNA        +E+     L
Sbjct: 58  DVTDPESIKA--------------AAAQAKDVDVVINNAGVLKPATLLEEGALEAL 99

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 37.8 bits (88), Expect = 9e-04
 Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 12/93 (12%)

Query: 41  MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETL-EMLREAKTPDAKDPM 99
           M+ LVTG  +G G  +   F Q+G  V  T  + +  ++ K+ L + L  A+  D ++  
Sbjct: 1   MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQL-DVRNRA 59

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           AI          + ++  +   +  ID+LVNNA
Sbjct: 60  AI----------EEMLASLPAEWRNIDVLVNNA 82

Length = 248

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 37.1 bits (87), Expect = 0.001
 Identities = 21/107 (19%), Positives = 40/107 (37%), Gaps = 6/107 (5%)

Query: 44  LVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS 102
           L+TGG  G+GRA+    A+ GA  +        +   A   L  L  A          ++
Sbjct: 4   LITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAA----GARVTVVA 59

Query: 103 ADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
            D+   +    V+  +      +  ++ +AA   + G +  +   R 
Sbjct: 60  CDVADRDALAAVLAAIPAVEGPLTGVI-HAAGVLDDGVLASLTPERF 105

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 37.2 bits (86), Expect = 0.001
 Identities = 32/103 (31%), Positives = 42/103 (40%), Gaps = 14/103 (13%)

Query: 33  TPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKT 92
            P+    G VALVTG   GIG  +      EG  V         D D +      R +K 
Sbjct: 3   EPNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLA------DLDRE------RGSKV 50

Query: 93  PDAKDPMA--ISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
             A    A  I+ D+  +      V EV+  + R+D LV NAA
Sbjct: 51  AKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAA 93

Length = 255

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 37.2 bits (86), Expect = 0.001
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 6/68 (8%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L     LVTG   G+G  V   +A  GATV       +  K  ++  + + EA  P   +
Sbjct: 4   LSDKTILVTGASQGLGEQVAKAYAAAGATVILV---ARHQKKLEKVYDAIVEAGHP---E 57

Query: 98  PMAISADL 105
           P AI  DL
Sbjct: 58  PFAIRFDL 65

Length = 239

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 37.2 bits (86), Expect = 0.001
 Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
           G V ++TG +SGIG      FA  GA V            A     +L E      +   
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVS--RILEEWHKARVE--- 55

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
           A++ DL    + +R  +        + +LV NAA
Sbjct: 56  AMTLDLASLRSVQRFAEAFKAKNSPLHVLVCNAA 89

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 37.3 bits (87), Expect = 0.001
 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 7/91 (7%)

Query: 39  RGMVALVTGGDSGIGRAVC-HCFAQEGATVAFT--YVKPQEDKDAKETLEMLREAKTPDA 95
            G V LVTGG  GIGRA+      + GA +        P E++   +TL  L        
Sbjct: 204 PGGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEAL----G 259

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRID 126
              + ISAD+      +R++++V   Y  ID
Sbjct: 260 ARVLYISADVTDAAAVRRLLEKVRERYGAID 290

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 37.1 bits (86), Expect = 0.002
 Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 5/94 (5%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
           G   ++TG ++GIG+      A+ GA V    +  ++    +E    +R  +     + +
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARV---IMACRDMAKCEEAAAEIR--RDTLNHEVI 55

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
               DL   ++ +    E +   DR+D+L+NNA 
Sbjct: 56  VRHLDLASLKSIRAFAAEFLAEEDRLDVLINNAG 89

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 36.9 bits (86), Expect = 0.002
 Identities = 20/94 (21%), Positives = 31/94 (32%), Gaps = 13/94 (13%)

Query: 43  ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTP---DAKDPM 99
            L+TG   GIG  +       G        +          L            D  D +
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTDEI 60

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
           A SA+         V + + +A   +D+L+NNA 
Sbjct: 61  AESAE--------AVAERLGDA--GLDVLINNAG 84

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 36.5 bits (85), Expect = 0.002
 Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 27/108 (25%)

Query: 44  LVTGGDSGIGRAVC-HCFAQEGATVAFTYVKPQE----DKDAKETLEMLREAKTPDAKDP 98
           L+TG  SGIG A C      +G  V  T  K ++    + +  E  ++       D  +P
Sbjct: 8   LITGCSSGIG-AYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQL-------DYAEP 59

Query: 99  MAISADLGFDENCKRVVDEVVNAYD-RIDILVNNAAEQY-ECGSVEDI 144
            +I+A          +V +V+     R+D L NN A  Y + G+VED+
Sbjct: 60  ESIAA----------LVAQVLELSGGRLDALFNNGA--YGQPGAVEDL 95

Length = 277

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 9/94 (9%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA-KETLEMLREAKTPDAKDP 98
           G  A++TGG SGIG A    FA+ GA V    V    DK   ++ +  LR A+  D    
Sbjct: 6   GRGAVITGGASGIGLATGTEFARRGARVVLGDV----DKPGLRQAVNHLR-AEGFDVHGV 60

Query: 99  MAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           M    D+   E    + DE       +D++ +NA
Sbjct: 61  M---CDVRHREEVTHLADEAFRLLGHVDVVFSNA 91

Length = 275

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	149
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.85
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.85
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.84
PRK06128	300	oxidoreductase; Provisional	99.82
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.8
KOG0725	270	consensus Reductases with broad range of substrate	99.8
PRK06701	290	short chain dehydrogenase; Provisional	99.79
PRK05876	275	short chain dehydrogenase; Provisional	99.78
PRK05867	253	short chain dehydrogenase; Provisional	99.78
PRK08862	227	short chain dehydrogenase; Provisional	99.78
PRK07478	254	short chain dehydrogenase; Provisional	99.77
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.77
PRK07791	286	short chain dehydrogenase; Provisional	99.77
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.77
PRK08339	263	short chain dehydrogenase; Provisional	99.77
PRK06114	254	short chain dehydrogenase; Provisional	99.77
PRK06139	330	short chain dehydrogenase; Provisional	99.77
PRK05854	313	short chain dehydrogenase; Provisional	99.77
PRK07062	265	short chain dehydrogenase; Provisional	99.76
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.76
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.76
PRK07109	334	short chain dehydrogenase; Provisional	99.76
PRK08303	305	short chain dehydrogenase; Provisional	99.76
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.76
PRK08589	272	short chain dehydrogenase; Validated	99.76
PRK05872	296	short chain dehydrogenase; Provisional	99.75
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.75
PRK06720	169	hypothetical protein; Provisional	99.75
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.75
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
KOG1208	314	consensus Dehydrogenases with different specificit	99.74
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.74
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.74
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.74
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.74
PRK07985	294	oxidoreductase; Provisional	99.73
PRK07063	260	short chain dehydrogenase; Provisional	99.73
PRK06194	287	hypothetical protein; Provisional	99.73
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.73
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.73
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.73
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.73
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.72
PRK07890	258	short chain dehydrogenase; Provisional	99.72
PRK06172	253	short chain dehydrogenase; Provisional	99.72
PRK08278	273	short chain dehydrogenase; Provisional	99.72
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.72
PLN02253	280	xanthoxin dehydrogenase	99.72
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.72
PRK07035	252	short chain dehydrogenase; Provisional	99.72
PRK07814	263	short chain dehydrogenase; Provisional	99.71
PRK05866	293	short chain dehydrogenase; Provisional	99.71
PRK08643	256	acetoin reductase; Validated	99.71
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.71
PRK05717	255	oxidoreductase; Validated	99.71
PRK09242	257	tropinone reductase; Provisional	99.7
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.7
PRK07677	252	short chain dehydrogenase; Provisional	99.7
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.7
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.7
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.7
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.7
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.69
PRK12744	257	short chain dehydrogenase; Provisional	99.69
PRK12743	256	oxidoreductase; Provisional	99.69
PRK07576	264	short chain dehydrogenase; Provisional	99.69
PRK08265	261	short chain dehydrogenase; Provisional	99.69
PRK08226	263	short chain dehydrogenase; Provisional	99.69
PRK06398	258	aldose dehydrogenase; Validated	99.69
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.69
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.69
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.69
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.69
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.69
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.68
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.68
PRK09134	258	short chain dehydrogenase; Provisional	99.68
PRK06197	306	short chain dehydrogenase; Provisional	99.68
PRK05599	246	hypothetical protein; Provisional	99.68
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.68
PRK06138	252	short chain dehydrogenase; Provisional	99.68
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.67
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.67
PRK08628	258	short chain dehydrogenase; Provisional	99.67
PRK05855	582	short chain dehydrogenase; Validated	99.67
PRK08251	248	short chain dehydrogenase; Provisional	99.67
PRK12937	245	short chain dehydrogenase; Provisional	99.67
PRK12939	250	short chain dehydrogenase; Provisional	99.67
PRK07825	273	short chain dehydrogenase; Provisional	99.67
PRK07856	252	short chain dehydrogenase; Provisional	99.67
PRK07831	262	short chain dehydrogenase; Provisional	99.67
PRK06949	258	short chain dehydrogenase; Provisional	99.67
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.67
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.67
PRK06484	520	short chain dehydrogenase; Validated	99.67
PRK07454	241	short chain dehydrogenase; Provisional	99.66
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.66
PRK07067	257	sorbitol dehydrogenase; Provisional	99.66
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.66
PRK07024	257	short chain dehydrogenase; Provisional	99.66
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.66
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.66
PRK09186	256	flagellin modification protein A; Provisional	99.66
PRK06123	248	short chain dehydrogenase; Provisional	99.66
PRK07774	250	short chain dehydrogenase; Provisional	99.66
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.66
PRK05650	270	short chain dehydrogenase; Provisional	99.66
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.66
PRK12747	252	short chain dehydrogenase; Provisional	99.65
PRK06500	249	short chain dehydrogenase; Provisional	99.65
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.65
PRK06182	273	short chain dehydrogenase; Validated	99.65
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.65
PRK06523	260	short chain dehydrogenase; Provisional	99.65
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.65
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.65
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.65
PRK06841	255	short chain dehydrogenase; Provisional	99.64
PRK06196	315	oxidoreductase; Provisional	99.64
PRK09072	263	short chain dehydrogenase; Provisional	99.64
PLN00015	308	protochlorophyllide reductase	99.64
PRK05875	276	short chain dehydrogenase; Provisional	99.64
PRK06179	270	short chain dehydrogenase; Provisional	99.64
PRK12827	249	short chain dehydrogenase; Provisional	99.64
PRK06180	277	short chain dehydrogenase; Provisional	99.64
PRK08267	260	short chain dehydrogenase; Provisional	99.64
PRK06483	236	dihydromonapterin reductase; Provisional	99.64
PRK06198	260	short chain dehydrogenase; Provisional	99.64
PRK06914	280	short chain dehydrogenase; Provisional	99.63
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.63
PRK08263	275	short chain dehydrogenase; Provisional	99.63
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.63
PRK12746	254	short chain dehydrogenase; Provisional	99.62
PRK06484	520	short chain dehydrogenase; Validated	99.62
PRK07775	274	short chain dehydrogenase; Provisional	99.62
PRK07832	272	short chain dehydrogenase; Provisional	99.62
PRK06125	259	short chain dehydrogenase; Provisional	99.62
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.62
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.62
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.62
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.62
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.61
PRK06181	263	short chain dehydrogenase; Provisional	99.61
PRK09135	249	pteridine reductase; Provisional	99.61
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.61
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.61
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.61
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.61
PRK07806	248	short chain dehydrogenase; Provisional	99.61
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.61
PRK07326	237	short chain dehydrogenase; Provisional	99.61
PRK05993	277	short chain dehydrogenase; Provisional	99.61
PRK08703	239	short chain dehydrogenase; Provisional	99.6
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.6
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.6
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.6
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.6
PRK07074	257	short chain dehydrogenase; Provisional	99.6
PRK12828	239	short chain dehydrogenase; Provisional	99.6
PRK06057	255	short chain dehydrogenase; Provisional	99.6
PRK05693	274	short chain dehydrogenase; Provisional	99.59
PRK12829	264	short chain dehydrogenase; Provisional	99.59
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.59
COG1028	251	FabG Dehydrogenases with different specificities (	99.59
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.59
PRK06482	276	short chain dehydrogenase; Provisional	99.58
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.58
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.58
PLN02780	320	ketoreductase/ oxidoreductase	99.58
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.58
PRK06940	275	short chain dehydrogenase; Provisional	99.58
PRK07201	657	short chain dehydrogenase; Provisional	99.58
PRK10538	248	malonic semialdehyde reductase; Provisional	99.58
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.57
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.57
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.57
PRK07904	253	short chain dehydrogenase; Provisional	99.57
PRK07069	251	short chain dehydrogenase; Validated	99.57
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.56
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.56
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.54
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.54
PRK08324	681	short chain dehydrogenase; Validated	99.54
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.53
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.51
PRK07102	243	short chain dehydrogenase; Provisional	99.51
PRK12742	237	oxidoreductase; Provisional	99.49
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.48
PRK09291	257	short chain dehydrogenase; Provisional	99.48
PRK06924	251	short chain dehydrogenase; Provisional	99.48
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.48
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.47
PRK08177	225	short chain dehydrogenase; Provisional	99.47
PRK07023	243	short chain dehydrogenase; Provisional	99.46
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.46
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.46
PRK07577	234	short chain dehydrogenase; Provisional	99.45
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.45
PRK07041	230	short chain dehydrogenase; Provisional	99.45
PRK08264	238	short chain dehydrogenase; Validated	99.44
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.44
PRK07060	245	short chain dehydrogenase; Provisional	99.43
PRK06101	240	short chain dehydrogenase; Provisional	99.42
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.41
PRK12367	245	short chain dehydrogenase; Provisional	99.41
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.4
PRK08017	256	oxidoreductase; Provisional	99.39
PRK06953	222	short chain dehydrogenase; Provisional	99.33
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.32
PRK05884	223	short chain dehydrogenase; Provisional	99.32
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.32
PRK08219	227	short chain dehydrogenase; Provisional	99.3
PRK07578	199	short chain dehydrogenase; Provisional	99.3
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.26
PLN02653	340	GDP-mannose 4,6-dehydratase	99.22
PLN03209	576	translocon at the inner envelope of chloroplast su	99.22
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.22
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.2
PLN02572	442	UDP-sulfoquinovose synthase	99.2
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.18
PLN02240	352	UDP-glucose 4-epimerase	99.16
PRK08309	177	short chain dehydrogenase; Provisional	99.16
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.13
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.12
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.12
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.08
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.08
PLN00198	338	anthocyanidin reductase; Provisional	99.07
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.05
PLN02214	342	cinnamoyl-CoA reductase	99.04
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.04
PRK10675	338	UDP-galactose-4-epimerase; Provisional	98.99
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	98.97
PLN02650	351	dihydroflavonol-4-reductase	98.96
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	98.92
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	98.92
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.91
PLN02583	297	cinnamoyl-CoA reductase	98.9
PLN02686	367	cinnamoyl-CoA reductase	98.88
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	98.87
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	98.86
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	98.82
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	98.82
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	98.8
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	98.8
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	98.78
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.78
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	98.78
PLN02427	386	UDP-apiose/xylose synthase	98.77
CHL00194	317	ycf39 Ycf39; Provisional	98.72
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.7
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	98.7
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	98.63
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	98.61
PLN02260	668	probable rhamnose biosynthetic enzyme	98.61
TIGR01746	367	Thioester-redct thioester reductase domain. It has	98.59
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	98.59
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.59
PLN02695	370	GDP-D-mannose-3',5'-epimerase	98.58
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	98.58
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	98.55
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	98.53
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.52
PRK05865	854	hypothetical protein; Provisional	98.51
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.51
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	98.51
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	98.5
PLN02996	491	fatty acyl-CoA reductase	98.45
PLN02166	436	dTDP-glucose 4,6-dehydratase	98.41
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	98.41
PLN02206	442	UDP-glucuronate decarboxylase	98.4
PLN02503	605	fatty acyl-CoA reductase 2	98.39
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	98.38
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	98.38
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.37
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	98.37
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.36
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.3
PRK07201	657	short chain dehydrogenase; Provisional	98.27
PLN02778	298	3,5-epimerase/4-reductase	98.25
PRK12320	699	hypothetical protein; Provisional	98.25
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	98.24
COG3320	382	Putative dehydrogenase domain of multifunctional n	98.22
PRK09620	229	hypothetical protein; Provisional	98.22
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.2
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.12
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	98.12
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.11
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.11
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	98.09
PLN00016	378	RNA-binding protein; Provisional	98.05
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.0
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.96
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	97.95
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.92
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	97.86
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	97.86
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	97.77
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	97.75
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.73
PLN02260	668	probable rhamnose biosynthetic enzyme	97.73
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	97.7
PRK14982	340	acyl-ACP reductase; Provisional	97.62
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	97.54
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.39
PRK06849	389	hypothetical protein; Provisional	97.34
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.29
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.27
COG2910	211	Putative NADH-flavin reductase [General function p	97.25
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.1
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.08
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	97.07
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.02
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.94
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.9
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.9
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.86
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	96.79
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.79
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	96.78
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.78
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.75
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.75
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.73
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	96.71
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.61
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.6
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.59
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.58
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	96.57
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.55
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.53
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.47
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	96.44
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.44
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.43
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.4
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.4
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	96.35
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.29
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.27
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.25
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.2
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.18
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.14
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.12
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.04
PRK04148	134	hypothetical protein; Provisional	96.01
PRK09496	453	trkA potassium transporter peripheral membrane com	95.99
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.98
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.98
KOG0069	336	consensus Glyoxylate/hydroxypyruvate reductase (D-	95.92
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.89
PLN00106	323	malate dehydrogenase	95.89
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.88
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	95.87
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.86
COG3268	382	Uncharacterized conserved protein [Function unknow	95.84
PRK12480	330	D-lactate dehydrogenase; Provisional	95.8
PRK13243	333	glyoxylate reductase; Reviewed	95.8
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	95.77
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	95.77
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.75
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.73
PLN00203	519	glutamyl-tRNA reductase	95.72
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	95.72
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.7
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.69
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	95.65
PTZ00325	321	malate dehydrogenase; Provisional	95.65
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	95.63
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.62
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.6
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.58
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	95.58
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	95.57
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.54
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.53
COG0569	225	TrkA K+ transport systems, NAD-binding component [	95.5
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	95.5
PRK06487	317	glycerate dehydrogenase; Provisional	95.48
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	95.47
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	95.46
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.46
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.43
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.42
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	95.41
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	95.4
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	95.39
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.39
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.36
PLN02928	347	oxidoreductase family protein	95.31
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.31
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	95.29
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.29
PRK05086	312	malate dehydrogenase; Provisional	95.25
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.24
PRK09496	453	trkA potassium transporter peripheral membrane com	95.23
PRK13403	335	ketol-acid reductoisomerase; Provisional	95.22
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.18
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	95.17
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.16
PLN02740	381	Alcohol dehydrogenase-like	95.13
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.12
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.11
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	95.11
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	95.07
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.04
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.03
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.02
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	94.97
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	94.96
PRK06719	157	precorrin-2 dehydrogenase; Validated	94.93
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	94.92
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	94.91
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	94.83
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	94.83
PRK07574	385	formate dehydrogenase; Provisional	94.81
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	94.8
PLN03139	386	formate dehydrogenase; Provisional	94.8
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	94.79
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	94.79
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	94.79
PRK06932	314	glycerate dehydrogenase; Provisional	94.78
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	94.77
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	94.75
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.73
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	94.64
PTZ00354	334	alcohol dehydrogenase; Provisional	94.63
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	94.61
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.6
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	94.56
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	94.46
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	94.45
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	94.4
PRK13771	334	putative alcohol dehydrogenase; Provisional	94.39
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	94.32
PRK08655	437	prephenate dehydrogenase; Provisional	94.32
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	94.32
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.28
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	94.24
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	94.22
PRK13886	241	conjugal transfer protein TraL; Provisional	94.22
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	94.19
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	94.19
PLN02712	667	arogenate dehydrogenase	94.15
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	94.13
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	94.12
PLN02586	360	probable cinnamyl alcohol dehydrogenase	94.11
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	94.1
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	94.09
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	94.07
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.05
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	94.05
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	94.01
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	93.98
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	93.96
PLN02178	375	cinnamyl-alcohol dehydrogenase	93.92
PRK12767	326	carbamoyl phosphate synthase-like protein; Provisi	93.89
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	93.84
PRK06436	303	glycerate dehydrogenase; Provisional	93.82
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.82
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	93.79
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	93.79
PLN02827	378	Alcohol dehydrogenase-like	93.7
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	93.68
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	93.67
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.66
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.62
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	93.61
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	93.6
PRK11790	409	D-3-phosphoglycerate dehydrogenase; Provisional	93.59
KOG2774	366	consensus NAD dependent epimerase [General functio	93.59
COG2894	272	MinD Septum formation inhibitor-activating ATPase	93.57
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	93.57
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	93.56
PRK08328	231	hypothetical protein; Provisional	93.55
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	93.55
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	93.53
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.51
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.49
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	93.48
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.47
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	93.45
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	93.43
PRK15116	268	sulfur acceptor protein CsdL; Provisional	93.42
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.36
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.36
PLN02494	477	adenosylhomocysteinase	93.35
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	93.35
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.32
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	93.32
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	93.3
PTZ00075	476	Adenosylhomocysteinase; Provisional	93.18
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	93.1
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.07
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	93.07

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.85  E-value=1.8e-20  Score=137.86  Aligned_cols=105  Identities=27%  Similarity=0.370  Sum_probs=91.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.++++||||||+|||+++|+.|+++|++|+++.|+   .+.+.+..+++...   .+..+.++.+|+++++++..+..
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~---~~kL~~la~~l~~~---~~v~v~vi~~DLs~~~~~~~l~~   76 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARR---EDKLEALAKELEDK---TGVEVEVIPADLSDPEALERLED   76 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc---HHHHHHHHHHHHHh---hCceEEEEECcCCChhHHHHHHH
Confidence            3578899999999999999999999999999999997   55666666777642   35678899999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.++.+.||+||||||+... +++.+.+.++
T Consensus        77 ~l~~~~~~IdvLVNNAG~g~~-g~f~~~~~~~  107 (265)
T COG0300          77 ELKERGGPIDVLVNNAGFGTF-GPFLELSLDE  107 (265)
T ss_pred             HHHhcCCcccEEEECCCcCCc-cchhhCChHH
Confidence            999998899999999999887 7888877653

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.85  E-value=1.1e-20  Score=140.02  Aligned_cols=103  Identities=31%  Similarity=0.485  Sum_probs=83.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+|+++|||||+|||.++|+.|++.|++++++.|+..+.+.+   .+++.+... .. ++++++||++|.+++..+++
T Consensus         9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v---~~~l~~~~~-~~-~v~~~~~Dvs~~~~~~~~~~   83 (282)
T KOG1205|consen    9 RLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERV---AEELRKLGS-LE-KVLVLQLDVSDEESVKKFVE   83 (282)
T ss_pred             HhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHH---HHHHHHhCC-cC-ccEEEeCccCCHHHHHHHHH
Confidence            47899999999999999999999999999999998874444443   344433211 22 68999999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      .+.+++|++|+||||||+... ....+.+
T Consensus        84 ~~~~~fg~vDvLVNNAG~~~~-~~~~~~~  111 (282)
T KOG1205|consen   84 WAIRHFGRVDVLVNNAGISLV-GFLEDTD  111 (282)
T ss_pred             HHHHhcCCCCEEEecCccccc-cccccCc
Confidence            999999999999999999873 4444443

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.84  E-value=9.9e-21  Score=136.34  Aligned_cols=103  Identities=28%  Similarity=0.467  Sum_probs=87.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||||+|||.++|++|++.|++|+++.|+   .+.++++..++.      ...++.+.+|++|.+++.++++
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR---~drL~~la~~~~------~~~~~~~~~DVtD~~~~~~~i~   73 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARR---EERLEALADEIG------AGAALALALDVTDRAAVEAAIE   73 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecc---HHHHHHHHHhhc------cCceEEEeeccCCHHHHHHHHH
Confidence            4577999999999999999999999999999999997   444444444432      1467889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      .+.+.|+++|+||||||.... .++.+.+.++|
T Consensus        74 ~~~~~~g~iDiLvNNAGl~~g-~~~~~~~~~dw  105 (246)
T COG4221          74 ALPEEFGRIDILVNNAGLALG-DPLDEADLDDW  105 (246)
T ss_pred             HHHHhhCcccEEEecCCCCcC-ChhhhCCHHHH
Confidence            999999999999999999876 78888877765

>PRK06128 oxidoreductase; Provisional

Probab=99.82  E-value=8.5e-19  Score=132.05  Aligned_cols=125  Identities=34%  Similarity=0.629  Sum_probs=92.8

Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCc
Q 044851           19 HVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDP   98 (149)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (149)
                      ..+.+.+......+.....+++|++||||+++|||.++++.|++.|++|++++++.. .....+..+.+..    .+.++
T Consensus        34 ~~~~~~~~~~~~~~~~~~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~-~~~~~~~~~~~~~----~~~~~  108 (300)
T PRK06128         34 HEMQPKPDHGEQSYKGFGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEE-EQDAAEVVQLIQA----EGRKA  108 (300)
T ss_pred             ccCCCCCCCCCcccccccccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcc-hHHHHHHHHHHHH----cCCeE
Confidence            334444443334444444578999999999999999999999999999998887532 2223334444443    34567


Q ss_pred             eEEEecCCChHHHHHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851           99 MAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus        99 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      .++.+|+++.++++++++++.+.++++|+||||||+.....++.+.+.++
T Consensus       109 ~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~  158 (300)
T PRK06128        109 VALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQ  158 (300)
T ss_pred             EEEecCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHH
Confidence            78999999999999999999999999999999999865435666665543

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.80  E-value=4.9e-19  Score=130.75  Aligned_cols=106  Identities=29%  Similarity=0.459  Sum_probs=90.2

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHH
Q 044851           34 PSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKR  113 (149)
Q Consensus        34 ~~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  113 (149)
                      +.....|+.+|||||++|+|+++|.+|+++|+.+++++.+.....   +..+++++    .+ +++.+.||+++++++..
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~---etv~~~~~----~g-~~~~y~cdis~~eei~~  103 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNE---ETVKEIRK----IG-EAKAYTCDISDREEIYR  103 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchH---HHHHHHHh----cC-ceeEEEecCCCHHHHHH
Confidence            344578999999999999999999999999999999999855444   44444443    23 78999999999999999


Q ss_pred             HHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          114 VVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       114 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ...++++..|.+|+||||||+... .++.+.+.++
T Consensus       104 ~a~~Vk~e~G~V~ILVNNAGI~~~-~~ll~~~d~e  137 (300)
T KOG1201|consen  104 LAKKVKKEVGDVDILVNNAGIVTG-KKLLDCSDEE  137 (300)
T ss_pred             HHHHHHHhcCCceEEEeccccccC-CCccCCCHHH
Confidence            999999999999999999999886 7888877654

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.80  E-value=4.4e-19  Score=131.93  Aligned_cols=110  Identities=35%  Similarity=0.498  Sum_probs=90.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+.+|++||||+++|||+++|++|++.|++|++++|+   .+.+.+...++..... .+.++..+.||+++.+++.+++
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~---~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~l~   79 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRS---EERLEETAQELGGLGY-TGGKVLAIVCDVSKEVDVEKLV   79 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHhcCC-CCCeeEEEECcCCCHHHHHHHH
Confidence            46899999999999999999999999999999999997   3344444444443211 2456888999999999999999


Q ss_pred             HHHHHh-cCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          116 DEVVNA-YDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       116 ~~~~~~-~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      .+..++ +|++|+||||||......++.|+++++|
T Consensus        80 ~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~  114 (270)
T KOG0725|consen   80 EFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVF  114 (270)
T ss_pred             HHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHH
Confidence            999988 7999999999999887557888887765

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.79  E-value=4.1e-18  Score=127.94  Aligned_cols=128  Identities=50%  Similarity=0.784  Sum_probs=99.9

Q ss_pred             CCCccccCCCCCCCCCCCCCCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCC
Q 044851           14 QPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTP   93 (149)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~   93 (149)
                      .+..+-.|+|.|++..+.......+++|++||||++++||.+++++|++.|++|++++++...  ........+..    
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~--~~~~~~~~~~~----   93 (290)
T PRK06701         20 QPGIESLMNPLPQFEAPNYKGSGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHE--DANETKQRVEK----   93 (290)
T ss_pred             CcChhhhCCcccCCCccccccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcch--HHHHHHHHHHh----
Confidence            345556789988877776666667889999999999999999999999999999999987422  22233333333    


Q ss_pred             CCCCceEEEecCCChHHHHHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851           94 DAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus        94 ~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      .+.++.++.+|+++.+++..+++++.+.++++|+||||||......++.+.+.+
T Consensus        94 ~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~  147 (290)
T PRK06701         94 EGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAE  147 (290)
T ss_pred             cCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHH
Confidence            345678899999999999999999999999999999999986543455555543

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.78  E-value=3.3e-18  Score=127.52  Aligned_cols=103  Identities=26%  Similarity=0.426  Sum_probs=85.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||++++++|++.|++|++++++   .+.+.+..+++..    .+.++.++.+|+++.+++..+++
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~---~~~l~~~~~~l~~----~~~~~~~~~~Dv~d~~~v~~~~~   75 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVD---KPGLRQAVNHLRA----EGFDVHGVMCDVRHREEVTHLAD   75 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHh----cCCeEEEEeCCCCCHHHHHHHHH
Confidence            4788999999999999999999999999999999987   3344455555543    34567788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||||+... +.+.+.+.+
T Consensus        76 ~~~~~~g~id~li~nAg~~~~-~~~~~~~~~  105 (275)
T PRK05876         76 EAFRLLGHVDVVFSNAGIVVG-GPIVEMTHD  105 (275)
T ss_pred             HHHHHcCCCCEEEECCCcCCC-CCcccCCHH
Confidence            999999999999999998765 566666554

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.78  E-value=3.9e-18  Score=125.27  Aligned_cols=103  Identities=23%  Similarity=0.346  Sum_probs=84.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||.+++++|++.|++|++++|+.   +.+++..+++..    .+.++.++.+|+++++++.++++
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~~~   78 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHL---DALEKLADEIGT----SGGKVVPVCCDVSQHQQVTSMLD   78 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCH---HHHHHHHHHHHh----cCCeEEEEEccCCCHHHHHHHHH
Confidence            46889999999999999999999999999999999863   334444444543    34567788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||+|.... .++.+.+.+
T Consensus        79 ~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~  108 (253)
T PRK05867         79 QVTAELGGIDIAVCNAGIITV-TPMLDMPLE  108 (253)
T ss_pred             HHHHHhCCCCEEEECCCCCCC-CChhhCCHH
Confidence            999999999999999998654 556555543

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.78  E-value=4.7e-18  Score=123.54  Aligned_cols=105  Identities=19%  Similarity=0.248  Sum_probs=85.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||+++|||++++++|++.|++|++++|+.   ..+++..+++..    .+..+..+.+|+++.++++++++
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~---~~l~~~~~~i~~----~~~~~~~~~~D~~~~~~~~~~~~   74 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQ---SALKDTYEQCSA----LTDNVYSFQLKDFSQESIRHLFD   74 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCH---HHHHHHHHHHHh----cCCCeEEEEccCCCHHHHHHHHH
Confidence            36789999999999999999999999999999999873   344444444543    34556788899999999999999


Q ss_pred             HHHHhcC-CccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYD-RIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g-~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.++ ++|+||||+|......++.+.+.++
T Consensus        75 ~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~  107 (227)
T PRK08862         75 AIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSES  107 (227)
T ss_pred             HHHHHhCCCCCEEEECCccCCCCCccccCCHHH
Confidence            9999998 9999999998654435666666543

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.77  E-value=5.3e-18  Score=124.54  Aligned_cols=104  Identities=31%  Similarity=0.495  Sum_probs=84.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||+++|||.+++++|++.|++|++++|+.   +.+.+..+++..    .+.++.++.+|+++.+++.++++
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~---~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   75 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQ---AELDQLVAEIRA----EGGEAVALAGDVRDEAYAKALVA   75 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHHH
Confidence            36789999999999999999999999999999999873   344444444543    34567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||||+.....++.+.+.+
T Consensus        76 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~  106 (254)
T PRK07478         76 LAVERFGGLDIAFNNAGTLGEMGPVAEMSLE  106 (254)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCChhhCCHH
Confidence            9999999999999999986543455555544

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.77  E-value=4.3e-18  Score=125.69  Aligned_cols=106  Identities=24%  Similarity=0.328  Sum_probs=80.7

Q ss_pred             CCCCCCCEEEEecCC--ChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHH
Q 044851           35 SNKLRGMVALVTGGD--SGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCK  112 (149)
Q Consensus        35 ~~~~~~~~~litG~s--~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  112 (149)
                      ...+++|++||||++  +|||+++|++|++.|++|++++|+....+    .++++..    ......++.||+++.++++
T Consensus         5 ~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~----~~~~~~~----~~~~~~~~~~D~~~~~~v~   76 (258)
T PRK07533          5 LLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP----YVEPLAE----ELDAPIFLPLDVREPGQLE   76 (258)
T ss_pred             ccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH----HHHHHHH----hhccceEEecCcCCHHHHH
Confidence            335789999999998  59999999999999999999998732222    2222322    1122467889999999999


Q ss_pred             HHHHHHHHhcCCccEEEeCCcCCCC---CCCCCCCCCCC
Q 044851          113 RVVDEVVNAYDRIDILVNNAAEQYE---CGSVEDIDESR  148 (149)
Q Consensus       113 ~~~~~~~~~~g~id~li~~ag~~~~---~~~~~~~s~~~  148 (149)
                      ++++++.+++|++|+||||||+...   ..++.+.+.++
T Consensus        77 ~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~  115 (258)
T PRK07533         77 AVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREG  115 (258)
T ss_pred             HHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHH
Confidence            9999999999999999999998642   13455655544

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.77  E-value=6.2e-18  Score=126.69  Aligned_cols=106  Identities=28%  Similarity=0.434  Sum_probs=86.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC------ChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ------EDKDAKETLEMLREAKTPDAKDPMAISADLGFDENC  111 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v  111 (149)
                      +++|++|||||++|||.++|++|++.|++|++++++..      ..+.+.+..+++..    .+.++.++.+|+++.+++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~Dv~~~~~v   79 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVA----AGGEAVANGDDIADWDGA   79 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHh----cCCceEEEeCCCCCHHHH
Confidence            67899999999999999999999999999999887631      11344455555544    355677889999999999


Q ss_pred             HHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          112 KRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       112 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      .++++++.+.++++|+||||||+... .++.+.+.++
T Consensus        80 ~~~~~~~~~~~g~id~lv~nAG~~~~-~~~~~~~~~~  115 (286)
T PRK07791         80 ANLVDAAVETFGGLDVLVNNAGILRD-RMIANMSEEE  115 (286)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCC-CCcccCCHHH
Confidence            99999999999999999999998764 5666666544

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.77  E-value=7.6e-18  Score=123.85  Aligned_cols=102  Identities=25%  Similarity=0.355  Sum_probs=82.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+|+++|||+++|||+++|++|++.|++|++++|+.  ..+.   .+.+..    .+.++.++.+|+++.+++..+++
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~--~~~~---~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~   75 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE--APET---QAQVEA----LGRKFHFITADLIQQKDIDSIVS   75 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch--HHHH---HHHHHH----cCCeEEEEEeCCCCHHHHHHHHH
Confidence            46789999999999999999999999999999988752  2222   222322    34567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.++++|+||||||+... .++.+.+.++
T Consensus        76 ~~~~~~g~iD~lv~~ag~~~~-~~~~~~~~~~  106 (251)
T PRK12481         76 QAVEVMGHIDILINNAGIIRR-QDLLEFGNKD  106 (251)
T ss_pred             HHHHHcCCCCEEEECCCcCCC-CCcccCCHHH
Confidence            999999999999999998765 5666666554

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.77  E-value=8.3e-18  Score=124.51  Aligned_cols=105  Identities=25%  Similarity=0.319  Sum_probs=83.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||+++|++|++.|++|++++|+.   ..+.+..+++...   .+.++.++.+|++++++++.+++
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~i~~~~~   78 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNE---ENLKKAREKIKSE---SNVDVSYIVADLTKREDLERTVK   78 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHhh---cCCceEEEEecCCCHHHHHHHHH
Confidence            47899999999999999999999999999999999873   3344444444321   23467789999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++. +++++|++|||+|.... .++.+++.++|
T Consensus        79 ~~~-~~g~iD~lv~nag~~~~-~~~~~~~~~~~  109 (263)
T PRK08339         79 ELK-NIGEPDIFFFSTGGPKP-GYFMEMSMEDW  109 (263)
T ss_pred             HHH-hhCCCcEEEECCCCCCC-CCcccCCHHHH
Confidence            985 58999999999998654 56767665543

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.77  E-value=8.2e-18  Score=123.67  Aligned_cols=105  Identities=28%  Similarity=0.403  Sum_probs=85.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +.+++|+++|||+++|||.++|++|++.|++|++++|+..  ..+.+..+++..    .+.++.++.+|+++++++..++
T Consensus         4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~--~~~~~~~~~l~~----~~~~~~~~~~D~~~~~~i~~~~   77 (254)
T PRK06114          4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTD--DGLAETAEHIEA----AGRRAIQIAADVTSKADLRAAV   77 (254)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcc--hHHHHHHHHHHh----cCCceEEEEcCCCCHHHHHHHH
Confidence            4578999999999999999999999999999999998632  223344444543    3456778899999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +++.+.++++|+||||+|+... .++.+.+.+
T Consensus        78 ~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~  108 (254)
T PRK06114         78 ARTEAELGALTLAVNAAGIANA-NPAEEMEEE  108 (254)
T ss_pred             HHHHHHcCCCCEEEECCCCCCC-CChHhCCHH
Confidence            9999999999999999998654 455555544

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.77  E-value=7.8e-18  Score=128.63  Aligned_cols=104  Identities=25%  Similarity=0.384  Sum_probs=86.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+|++||||+++|||++++++|++.|++|++++|+   .+.+.+..+++..    .+.++.++.+|++|.++++++++
T Consensus         4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~---~~~l~~~~~~~~~----~g~~~~~~~~Dv~d~~~v~~~~~   76 (330)
T PRK06139          4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARD---EEALQAVAEECRA----LGAEVLVVPTDVTDADQVKALAT   76 (330)
T ss_pred             CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHh----cCCcEEEEEeeCCCHHHHHHHHH
Confidence            4678999999999999999999999999999999997   3445555555554    45667888999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.++++|++|||||+... +++.+.+.++
T Consensus        77 ~~~~~~g~iD~lVnnAG~~~~-~~~~~~~~e~  107 (330)
T PRK06139         77 QAASFGGRIDVWVNNVGVGAV-GRFEETPIEA  107 (330)
T ss_pred             HHHHhcCCCCEEEECCCcCCC-CCcccCCHHH
Confidence            999998999999999998765 5677666543

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.2e-17  Score=126.75  Aligned_cols=95  Identities=22%  Similarity=0.275  Sum_probs=79.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++||||++|||+++|++|++.|++|++++|+.   +...+..+++....  .+..+.++.+|+++.++++++++
T Consensus        11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~---~~~~~~~~~l~~~~--~~~~v~~~~~Dl~d~~sv~~~~~   85 (313)
T PRK05854         11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNR---AKGEAAVAAIRTAV--PDAKLSLRALDLSSLASVAALGE   85 (313)
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHHhC--CCCceEEEEecCCCHHHHHHHHH
Confidence            46889999999999999999999999999999999973   34444555554311  23457889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~  136 (149)
                      ++.+.++++|+||||||+..
T Consensus        86 ~~~~~~~~iD~li~nAG~~~  105 (313)
T PRK05854         86 QLRAEGRPIHLLINNAGVMT  105 (313)
T ss_pred             HHHHhCCCccEEEECCcccc
Confidence            99999999999999999865

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.76  E-value=6e-18  Score=124.96  Aligned_cols=106  Identities=28%  Similarity=0.360  Sum_probs=84.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|+++|||+++|||++++++|++.|++|++++|+..   .+.+..+++....  .+..+.++.+|+++.+++++++
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~   78 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEE---RLASAEARLREKF--PGARLLAARCDVLDEADVAAFA   78 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHH---HHHHHHHHHHhhC--CCceEEEEEecCCCHHHHHHHH
Confidence            3578999999999999999999999999999999999743   3333444443310  1245778899999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +++.+.++++|+||||||+... .++.+.+.+
T Consensus        79 ~~~~~~~g~id~li~~Ag~~~~-~~~~~~~~~  109 (265)
T PRK07062         79 AAVEARFGGVDMLVNNAGQGRV-STFADTTDD  109 (265)
T ss_pred             HHHHHhcCCCCEEEECCCCCCC-CChhhCCHH
Confidence            9999999999999999998654 566665544

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.76  E-value=5.2e-18  Score=124.86  Aligned_cols=102  Identities=25%  Similarity=0.369  Sum_probs=81.5

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRGMVALVTGGD--SGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~s--~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .+++|+++|||++  +|||+++|++|++.|++|++++|+.    ...+.++++.      ...+.++.+|++++++++++
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~----~~~~~~~~~~------~~~~~~~~~Dl~~~~~v~~~   73 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND----RMKKSLQKLV------DEEDLLVECDVASDESIERA   73 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch----HHHHHHHhhc------cCceeEEeCCCCCHHHHHHH
Confidence            4789999999999  7999999999999999999998861    2223333332      23467889999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCC---CCCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYE---CGSVEDIDESR  148 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~---~~~~~~~s~~~  148 (149)
                      ++++.++++++|+||||||+..+   .+++.+++.++
T Consensus        74 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~  110 (252)
T PRK06079         74 FATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDG  110 (252)
T ss_pred             HHHHHHHhCCCCEEEEcccccccccccCCcccCCHHH
Confidence            99999999999999999998653   14566666554

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.76  E-value=1e-17  Score=123.72  Aligned_cols=106  Identities=18%  Similarity=0.307  Sum_probs=81.8

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRGMVALVTGGD--SGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~s--~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .+.+|+++|||++  +|||+++|++|++.|++|++++|+......+++..+++      .+.++.++.+|++|+++++++
T Consensus         4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~Dv~d~~~v~~~   77 (257)
T PRK08594          4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTL------EGQESLLLPCDVTSDEEITAC   77 (257)
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHc------CCCceEEEecCCCCHHHHHHH
Confidence            4788999999997  89999999999999999999987633223333333222      134577889999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCC---CCCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYE---CGSVEDIDESR  148 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~---~~~~~~~s~~~  148 (149)
                      ++++.+.+|++|+||||+|+...   ..++.+.+.++
T Consensus        78 ~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~  114 (257)
T PRK08594         78 FETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDG  114 (257)
T ss_pred             HHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHH
Confidence            99999999999999999998642   13455555443

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.2e-17  Score=127.67  Aligned_cols=104  Identities=26%  Similarity=0.398  Sum_probs=86.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++++++|||+++|||++++++|++.|++|++++|+   .+.+.+..+++..    .+.++.++.+|++|.++++.+++
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~---~~~l~~~~~~l~~----~g~~~~~v~~Dv~d~~~v~~~~~   77 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARG---EEGLEALAAEIRA----AGGEALAVVADVADAEAVQAAAD   77 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHH----cCCcEEEEEecCCCHHHHHHHHH
Confidence            4678999999999999999999999999999999986   3344445555544    45677889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      .+.++++++|++|||+|.... .++.+.+.++
T Consensus        78 ~~~~~~g~iD~lInnAg~~~~-~~~~~~~~~~  108 (334)
T PRK07109         78 RAEEELGPIDTWVNNAMVTVF-GPFEDVTPEE  108 (334)
T ss_pred             HHHHHCCCCCEEEECCCcCCC-CchhhCCHHH
Confidence            999999999999999998654 5666655443

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.4e-17  Score=126.02  Aligned_cols=95  Identities=31%  Similarity=0.434  Sum_probs=78.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCC-------hHHHHHHHHHHHhccCCCCCCceEEEecCCCh
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQE-------DKDAKETLEMLREAKTPDAKDPMAISADLGFD  108 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~  108 (149)
                      ..+++|+++||||++|||+++|+.|++.|++|++++|+...       .+.+.+..+++..    .+..+.++.+|++++
T Consensus         4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~Dv~~~   79 (305)
T PRK08303          4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTA----AGGRGIAVQVDHLVP   79 (305)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHh----cCCceEEEEcCCCCH
Confidence            34789999999999999999999999999999999987421       1233334444443    345577889999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEeCC-cC
Q 044851          109 ENCKRVVDEVVNAYDRIDILVNNA-AE  134 (149)
Q Consensus       109 ~~v~~~~~~~~~~~g~id~li~~a-g~  134 (149)
                      ++++++++++.+.+|++|+||||+ |+
T Consensus        80 ~~v~~~~~~~~~~~g~iDilVnnA~g~  106 (305)
T PRK08303         80 EQVRALVERIDREQGRLDILVNDIWGG  106 (305)
T ss_pred             HHHHHHHHHHHHHcCCccEEEECCccc
Confidence            999999999999999999999999 75

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.76  E-value=1.6e-17  Score=125.55  Aligned_cols=105  Identities=30%  Similarity=0.451  Sum_probs=85.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++||||+++|||.++|++|++.|++|++++++.  .....+..+++..    .+.++.++.+|+++.+++..++
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~--~~~~~~~~~~i~~----~g~~~~~~~~Dv~d~~~~~~~~   81 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVAS--ALDASDVLDEIRA----AGAKAVAVAGDISQRATADELV   81 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCc--hhHHHHHHHHHHh----cCCeEEEEeCCCCCHHHHHHHH
Confidence            457899999999999999999999999999999988752  2234445555554    4556788999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +.+.+ ++++|+||||||+... ..+.+.+.++
T Consensus        82 ~~~~~-~g~iD~li~nAG~~~~-~~~~~~~~~~  112 (306)
T PRK07792         82 ATAVG-LGGLDIVVNNAGITRD-RMLFNMSDEE  112 (306)
T ss_pred             HHHHH-hCCCCEEEECCCCCCC-CCcccCCHHH
Confidence            99988 9999999999998765 4566655443

>PRK08589 short chain dehydrogenase; Validated

Probab=99.76  E-value=1.7e-17  Score=123.28  Aligned_cols=102  Identities=27%  Similarity=0.472  Sum_probs=83.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||+++++.|++.|++|++++|+    ..+.+..+++..    .+.++.++.+|+++.+++..+++
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~----~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~   74 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA----EAVSETVDKIKS----NGGKAKAYHVDISDEQQVKDFAS   74 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc----HHHHHHHHHHHh----cCCeEEEEEeecCCHHHHHHHHH
Confidence            3678999999999999999999999999999999986    233444455543    34567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      ++.+.++++|+||||||+.....++.+.+.
T Consensus        75 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~  104 (272)
T PRK08589         75 EIKEQFGRVDVLFNNAGVDNAAGRIHEYPV  104 (272)
T ss_pred             HHHHHcCCcCEEEECCCCCCCCCCcccCCH
Confidence            999999999999999998643245555443

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.8e-17  Score=124.70  Aligned_cols=105  Identities=25%  Similarity=0.373  Sum_probs=84.4

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           35 SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        35 ~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      ...+++|++||||+++|||+.+++.|++.|++|++++|+   .+.+.+..+++.     .+..+..+.+|++|.+++..+
T Consensus         4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~l~~~~~~l~-----~~~~~~~~~~Dv~d~~~v~~~   75 (296)
T PRK05872          4 MTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLE---EAELAALAAELG-----GDDRVLTVVADVTDLAAMQAA   75 (296)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhc-----CCCcEEEEEecCCCHHHHHHH
Confidence            345789999999999999999999999999999999986   333433333332     234556677999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++++.+.++++|+||||+|+... .++.+.+.++
T Consensus        76 ~~~~~~~~g~id~vI~nAG~~~~-~~~~~~~~~~  108 (296)
T PRK05872         76 AEEAVERFGGIDVVVANAGIASG-GSVAQVDPDA  108 (296)
T ss_pred             HHHHHHHcCCCCEEEECCCcCCC-cCcccCCHHH
Confidence            99999999999999999998764 5676666543

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.75  E-value=5.4e-18  Score=116.95  Aligned_cols=101  Identities=33%  Similarity=0.549  Sum_probs=84.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      |+++||||++|||++++++|+++|+. |++++|+ ...+...+...++..    .+.++.++++|+++.++++.+++++.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~-~~~~~~~~l~~~l~~----~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRS-EDSEGAQELIQELKA----PGAKITFIECDLSDPESIRALIEEVI   75 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESS-CHHHHHHHHHHHHHH----TTSEEEEEESETTSHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeec-ccccccccccccccc----cccccccccccccccccccccccccc
Confidence            68999999999999999999999765 6777775 224455566666665    56778899999999999999999999


Q ss_pred             HhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          120 NAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +.++++|++|||+|.... +++.+++.+
T Consensus        76 ~~~~~ld~li~~ag~~~~-~~~~~~~~~  102 (167)
T PF00106_consen   76 KRFGPLDILINNAGIFSD-GSLDDLSEE  102 (167)
T ss_dssp             HHHSSESEEEEECSCTTS-BSGGGSHHH
T ss_pred             cccccccccccccccccc-cccccccch
Confidence            999999999999999874 677776544

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06720 hypothetical protein; Provisional

Probab=99.75  E-value=4.7e-17  Score=113.41  Aligned_cols=102  Identities=31%  Similarity=0.444  Sum_probs=82.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||+++|||.++++.|++.|++|++++++.   +.+....+++..    .+....++.+|+++.+++.++++
T Consensus        13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~---~~~~~~~~~l~~----~~~~~~~~~~Dl~~~~~v~~~v~   85 (169)
T PRK06720         13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQ---ESGQATVEEITN----LGGEALFVSYDMEKQGDWQRVIS   85 (169)
T ss_pred             ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHH
Confidence            36889999999999999999999999999999999863   333333344433    34456778999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      ++.+.+|++|++|||||+.....++.+.+
T Consensus        86 ~~~~~~G~iDilVnnAG~~~~~~~~~~~~  114 (169)
T PRK06720         86 ITLNAFSRIDMLFQNAGLYKIDSIFSRQQ  114 (169)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccccc
Confidence            99999999999999999876544554434

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=8e-18  Score=125.22  Aligned_cols=104  Identities=18%  Similarity=0.308  Sum_probs=79.5

Q ss_pred             CCCCEEEEecCCC--hHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           38 LRGMVALVTGGDS--GIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        38 ~~~~~~litG~s~--gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +++|++||||+++  |||+++|++|++.|++|++++|+...    .+..+++...   .+ ...++.+|++|.+++++++
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~----~~~~~~~~~~---~g-~~~~~~~Dv~d~~~v~~~~   76 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEAL----GKRVKPLAES---LG-SDFVLPCDVEDIASVDAVF   76 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHH----HHHHHHHHHh---cC-CceEEeCCCCCHHHHHHHH
Confidence            6789999999996  99999999999999999999886321    1222333221   12 2356889999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCC---CCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYEC---GSVEDIDESRL  149 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~---~~~~~~s~~~~  149 (149)
                      +++.+++|++|+||||||+....   .++.+++.++|
T Consensus        77 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~  113 (271)
T PRK06505         77 EALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENF  113 (271)
T ss_pred             HHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHH
Confidence            99999999999999999986431   35556665543

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.75  E-value=1.2e-17  Score=117.32  Aligned_cols=90  Identities=27%  Similarity=0.390  Sum_probs=78.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      ++.|.++|||||++|||+++|++|.+.|..||+++|+   ...+.+..+        ....++...||+.|.++++++++
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~---e~~L~e~~~--------~~p~~~t~v~Dv~d~~~~~~lve   70 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRN---EERLAEAKA--------ENPEIHTEVCDVADRDSRRELVE   70 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCc---HHHHHHHHh--------cCcchheeeecccchhhHHHHHH
Confidence            4678999999999999999999999999999999997   433433332        34567788899999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~  137 (149)
                      .++++++.+++||||||+...
T Consensus        71 wLkk~~P~lNvliNNAGIqr~   91 (245)
T COG3967          71 WLKKEYPNLNVLINNAGIQRN   91 (245)
T ss_pred             HHHhhCCchheeeecccccch
Confidence            999999999999999999764

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=1.5e-17  Score=124.06  Aligned_cols=103  Identities=21%  Similarity=0.354  Sum_probs=79.8

Q ss_pred             CCCCEEEEecCC--ChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           38 LRGMVALVTGGD--SGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        38 ~~~~~~litG~s--~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +.+|++||||++  +|||+++|++|++.|++|++++|+..    ..+.++++..+   .+.. .++.+|++|.+++++++
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~----~~~~~~~~~~~---~~~~-~~~~~Dv~d~~~v~~~~   74 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA----LKKRVEPIAQE---LGSD-YVYELDVSKPEHFKSLA   74 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH----HHHHHHHHHHh---cCCc-eEEEecCCCHHHHHHHH
Confidence            578999999997  79999999999999999999998631    22233333221   1223 57889999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCC---CCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYE---CGSVEDIDESR  148 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~---~~~~~~~s~~~  148 (149)
                      +++.+.++++|+||||||+...   ..++.+.+.++
T Consensus        75 ~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~  110 (274)
T PRK08415         75 ESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEA  110 (274)
T ss_pred             HHHHHHcCCCCEEEECCccCcccccccccccCCHHH
Confidence            9999999999999999998542   14566666554

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.74  E-value=2.3e-17  Score=124.77  Aligned_cols=97  Identities=28%  Similarity=0.368  Sum_probs=82.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+.+++++|||+++|||+++|+.|+.+|++|++.+|+.   +...+..+++...  .....+.+++||+++.++|..+.
T Consensus        31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~---~~~~~~~~~i~~~--~~~~~i~~~~lDLssl~SV~~fa  105 (314)
T KOG1208|consen   31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNE---ERGEEAKEQIQKG--KANQKIRVIQLDLSSLKSVRKFA  105 (314)
T ss_pred             ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCH---HHHHHHHHHHHhc--CCCCceEEEECCCCCHHHHHHHH
Confidence            346789999999999999999999999999999999984   3444555555431  14556788999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~  137 (149)
                      +++.+.++++|+||||||+...
T Consensus       106 ~~~~~~~~~ldvLInNAGV~~~  127 (314)
T KOG1208|consen  106 EEFKKKEGPLDVLINNAGVMAP  127 (314)
T ss_pred             HHHHhcCCCccEEEeCcccccC
Confidence            9999999999999999999875

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.74  E-value=3.1e-17  Score=120.46  Aligned_cols=104  Identities=22%  Similarity=0.362  Sum_probs=84.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+|++|||||++|||.+++++|++.|++|++++|+.   ..+.+..+++..    .+..+.++.+|+++.++++.+++
T Consensus         6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~---~~~~~~~~~l~~----~~~~~~~~~~Dl~~~~~~~~~~~   78 (254)
T PRK08085          6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITA---ERAELAVAKLRQ----EGIKAHAAPFNVTHKQEVEAAIE   78 (254)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCH---HHHHHHHHHHHh----cCCeEEEEecCCCCHHHHHHHHH
Confidence            46889999999999999999999999999999999873   344444455543    34456788899999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      .+.+.++++|+||||+|.... .++.+.+.++
T Consensus        79 ~~~~~~~~id~vi~~ag~~~~-~~~~~~~~~~  109 (254)
T PRK08085         79 HIEKDIGPIDVLINNAGIQRR-HPFTEFPEQE  109 (254)
T ss_pred             HHHHhcCCCCEEEECCCcCCC-CChhhCCHHH
Confidence            999999999999999998654 5566655443

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.74  E-value=2.5e-17  Score=121.60  Aligned_cols=107  Identities=21%  Similarity=0.314  Sum_probs=82.3

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRGMVALVTGGD--SGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~s--~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .+.+|+++|||++  +|||+++|++|++.|++|++++++... ....+.++++..    ....+.++.+|++|.++++++
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~v~~~   77 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEK-GRFEKKVRELTE----PLNPSLFLPCDVQDDAQIEET   77 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCccc-chHHHHHHHHHh----ccCcceEeecCcCCHHHHHHH
Confidence            4678999999986  899999999999999999988775321 122334444443    223466889999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCC---CCCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYE---CGSVEDIDESR  148 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~---~~~~~~~s~~~  148 (149)
                      ++++.+.++++|+||||+|+...   ..++.+.+.++
T Consensus        78 ~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~  114 (258)
T PRK07370         78 FETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREG  114 (258)
T ss_pred             HHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHH
Confidence            99999999999999999998642   14566665544

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.74  E-value=4e-17  Score=120.45  Aligned_cols=95  Identities=28%  Similarity=0.489  Sum_probs=78.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|+++|||+++|||+++|++|++.|++|++++++.  .+.+....+++...   .+.++.++.+|+++++++.+++
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~   78 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSN--VEEANKIAEDLEQK---YGIKAKAYPLNILEPETYKELF   78 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC--HHHHHHHHHHHHHh---cCCceEEEEcCCCCHHHHHHHH
Confidence            357899999999999999999999999999998887642  33344444444321   2456788999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~  135 (149)
                      +++.+.++++|+||||||+.
T Consensus        79 ~~~~~~~g~id~lv~nAg~~   98 (260)
T PRK08416         79 KKIDEDFDRVDFFISNAIIS   98 (260)
T ss_pred             HHHHHhcCCccEEEECcccc
Confidence            99999999999999999875

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.74  E-value=3.6e-17  Score=121.27  Aligned_cols=91  Identities=24%  Similarity=0.350  Sum_probs=74.9

Q ss_pred             CCCCEEEEecCCC--hHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           38 LRGMVALVTGGDS--GIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        38 ~~~~~~litG~s~--gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +++|+++||||++  |||+++|++|++.|++|++++|+.    .+.+..+++..    ......++.||++|++++++++
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~----~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~v~~~~   75 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND----KLKGRVEEFAA----QLGSDIVLPCDVAEDASIDAMF   75 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch----hHHHHHHHHHh----ccCCceEeecCCCCHHHHHHHH
Confidence            6789999999986  999999999999999999988752    22333444443    2234567889999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~  136 (149)
                      +++.+.++++|+||||||+..
T Consensus        76 ~~~~~~~g~iD~linnAg~~~   96 (262)
T PRK07984         76 AELGKVWPKFDGFVHSIGFAP   96 (262)
T ss_pred             HHHHhhcCCCCEEEECCccCC
Confidence            999999999999999999854

>PRK07985 oxidoreductase; Provisional

Probab=99.73  E-value=1.1e-16  Score=120.32  Aligned_cols=107  Identities=32%  Similarity=0.537  Sum_probs=82.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||++++++|++.|++|++++++.. ....++..+.+..    .+..+.++.+|+++.+++..+++
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~  120 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVE-EEDAQDVKKIIEE----CGRKAVLLPGDLSDEKFARSLVH  120 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcc-hhhHHHHHHHHHH----cCCeEEEEEccCCCHHHHHHHHH
Confidence            478899999999999999999999999999998876532 2222233322332    34567788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.++++|++|||||......++.+.+.++
T Consensus       121 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~  152 (294)
T PRK07985        121 EAHKALGGLDIMALVAGKQVAIPDIADLTSEQ  152 (294)
T ss_pred             HHHHHhCCCCEEEECCCCCcCCCChhhCCHHH
Confidence            99999999999999999754334566655443

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.73  E-value=2.7e-17  Score=121.16  Aligned_cols=105  Identities=30%  Similarity=0.420  Sum_probs=82.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||+++|||.+++++|+++|++|++++|+.   +.+.+..+++... . .+.++.++.+|+++.+++..+++
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~---~~~~~~~~~~~~~-~-~~~~~~~~~~Dl~~~~~~~~~~~   78 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDA---ALAERAAAAIARD-V-AGARVLAVPADVTDAASVAAAVA   78 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHhc-c-CCceEEEEEccCCCHHHHHHHHH
Confidence            46789999999999999999999999999999999973   3344444444321 0 13457788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||||.... ..+.+.+.+
T Consensus        79 ~~~~~~g~id~li~~ag~~~~-~~~~~~~~~  108 (260)
T PRK07063         79 AAEEAFGPLDVLVNNAGINVF-ADPLAMTDE  108 (260)
T ss_pred             HHHHHhCCCcEEEECCCcCCC-CChhhCCHH
Confidence            999999999999999998654 444444433

>PRK06194 hypothetical protein; Provisional

Probab=99.73  E-value=5.6e-17  Score=121.04  Aligned_cols=102  Identities=22%  Similarity=0.332  Sum_probs=82.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .++++++|||||++|||.+++++|+++|++|++++|+.   ..+.+..+++..    .+.++.++.+|++|.++++++++
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~----~~~~~~~~~~D~~d~~~~~~~~~   75 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQ---DALDRAVAELRA----QGAEVLGVRTDVSDAAQVEALAD   75 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCCh---HHHHHHHHHHHh----cCCeEEEEECCCCCHHHHHHHHH
Confidence            35678999999999999999999999999999999863   333444444443    34467789999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      .+.+.++++|+||||||.... .++.+.+.
T Consensus        76 ~~~~~~g~id~vi~~Ag~~~~-~~~~~~~~  104 (287)
T PRK06194         76 AALERFGAVHLLFNNAGVGAG-GLVWENSL  104 (287)
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CCcccCCH
Confidence            999999999999999999765 45554443

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=4.5e-17  Score=120.48  Aligned_cols=92  Identities=23%  Similarity=0.401  Sum_probs=74.3

Q ss_pred             CCCCEEEEecC--CChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           38 LRGMVALVTGG--DSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        38 ~~~~~~litG~--s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +++|+++||||  ++|||+++|++|++.|++|++++|+.    ...+..+++..    .......+.||+++.++++.++
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~   75 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD----KLEERVRKMAA----ELDSELVFRCDVASDDEINQVF   75 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH----HHHHHHHHHHh----ccCCceEEECCCCCHHHHHHHH
Confidence            67899999997  67999999999999999999988752    12233334432    1123457889999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~  137 (149)
                      +++.++++++|+||||||+...
T Consensus        76 ~~~~~~~g~iD~lVnnAG~~~~   97 (261)
T PRK08690         76 ADLGKHWDGLDGLVHSIGFAPK   97 (261)
T ss_pred             HHHHHHhCCCcEEEECCccCCc
Confidence            9999999999999999998643

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=6.8e-17  Score=119.45  Aligned_cols=104  Identities=20%  Similarity=0.255  Sum_probs=79.6

Q ss_pred             CCCCCEEEEecCCC--hHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRGMVALVTGGDS--GIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~s~--gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .+++|++||||+++  |||+++|+.|++.|++|++.+|+.    ...+.++++...   .+. ..++.+|++|+++++++
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~----~~~~~~~~l~~~---~g~-~~~~~~Dv~~~~~v~~~   76 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE----VLEKRVKPLAEE---IGC-NFVSELDVTNPKSISNL   76 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch----HHHHHHHHHHHh---cCC-ceEEEccCCCHHHHHHH
Confidence            46789999999997  899999999999999999988752    122334444331   122 24678999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCC---CCCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYE---CGSVEDIDESR  148 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~---~~~~~~~s~~~  148 (149)
                      ++++.+++|++|+||||+|+...   ..++.+.+.++
T Consensus        77 ~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~  113 (260)
T PRK06603         77 FDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLEN  113 (260)
T ss_pred             HHHHHHHcCCccEEEEccccCCcccccCccccCCHHH
Confidence            99999999999999999998542   13555665544

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.73  E-value=7e-17  Score=118.65  Aligned_cols=102  Identities=32%  Similarity=0.440  Sum_probs=83.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||++++||.+++++|++.|++|++++|+.   ....+..+.+..    .+.++.++.+|+++.++++.+++
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~i~~----~~~~~~~~~~D~~~~~~~~~~~~   79 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDP---AKLAAAAESLKG----QGLSAHALAFDVTDHDAVRAAID   79 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHHHh----cCceEEEEEccCCCHHHHHHHHH
Confidence            47899999999999999999999999999999999873   334444444443    34567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      ++.+.++++|+||||+|.... .++.+.+.
T Consensus        80 ~~~~~~~~~d~li~~ag~~~~-~~~~~~~~  108 (255)
T PRK07523         80 AFEAEIGPIDILVNNAGMQFR-TPLEDFPA  108 (255)
T ss_pred             HHHHhcCCCCEEEECCCCCCC-CChhhCCH
Confidence            999999999999999998654 55555543

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.73  E-value=8.6e-17  Score=118.93  Aligned_cols=105  Identities=27%  Similarity=0.396  Sum_probs=85.5

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           35 SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        35 ~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .+.+.+|+++|||++++||.+++++|++.|++|++++++.   +.+.+..+.+..    .+.++.++.+|+++.++++.+
T Consensus         5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~   77 (265)
T PRK07097          5 LFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQ---ELVDKGLAAYRE----LGIEAHGYVCDVTDEDGVQAM   77 (265)
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCH---HHHHHHHHHHHh----cCCceEEEEcCCCCHHHHHHH
Confidence            3457889999999999999999999999999999998863   344444444543    455688899999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +.++.+.++++|+||||+|+... .++.+.+.+
T Consensus        78 ~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~  109 (265)
T PRK07097         78 VSQIEKEVGVIDILVNNAGIIKR-IPMLEMSAE  109 (265)
T ss_pred             HHHHHHhCCCCCEEEECCCCCCC-CCcccCCHH
Confidence            99999999999999999998765 455555443

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.73  E-value=7.5e-17  Score=118.72  Aligned_cols=103  Identities=31%  Similarity=0.448  Sum_probs=82.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||+++|||.+++++|++.|++|++++|+.    ...+..+++..    .+..+.++.+|+++.+++..+++
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~----~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   76 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE----LVHEVAAELRA----AGGEALALTADLETYAGAQAAMA   76 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch----HHHHHHHHHHh----cCCeEEEEEEeCCCHHHHHHHHH
Confidence            47789999999999999999999999999999999862    12233344433    34567788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||||......++.+.+.+
T Consensus        77 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~  107 (260)
T PRK12823         77 AAVEAFGRIDVLINNVGGTIWAKPFEEYEEE  107 (260)
T ss_pred             HHHHHcCCCeEEEECCccccCCCChhhCChH
Confidence            9999999999999999975333455555543

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.73  E-value=1e-16  Score=117.81  Aligned_cols=105  Identities=26%  Similarity=0.380  Sum_probs=86.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           35 SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        35 ~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      +..+++|+++|||++++||.+++++|++.|++|++++|+.   +.+....+++..    .+.++.++.+|+++++++..+
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~---~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~   78 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNA---ATLEAAVAALRA----AGGAAEALAFDIADEEAVAAA   78 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCH---HHHHHHHHHHHh----cCCceEEEEccCCCHHHHHHH
Confidence            4457899999999999999999999999999999999973   334444444543    345678899999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++++.+.++++|++|||+|.... .++.+.+.+
T Consensus        79 ~~~~~~~~~~id~vi~~ag~~~~-~~~~~~~~~  110 (256)
T PRK06124         79 FARIDAEHGRLDILVNNVGARDR-RPLAELDDA  110 (256)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCC-CChhhCCHH
Confidence            99999999999999999998654 566655543

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.72  E-value=6.1e-17  Score=120.53  Aligned_cols=104  Identities=19%  Similarity=0.265  Sum_probs=79.5

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRGMVALVTGGD--SGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~s--~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .+++|++||||++  +|||+++|+.|++.|++|++++|+..    ..+.++++..+   .+ ...++.+|+++.++++++
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~----~~~~~~~l~~~---~~-~~~~~~~Dl~~~~~v~~~   78 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA----LKKRVEPLAAE---LG-AFVAGHCDVTDEASIDAV   78 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH----HHHHHHHHHHh---cC-CceEEecCCCCHHHHHHH
Confidence            3678999999997  89999999999999999998887521    22233333321   12 245688999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCC---CCCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYE---CGSVEDIDESR  148 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~---~~~~~~~s~~~  148 (149)
                      ++++.++++++|+||||||+...   ..++.+.+.++
T Consensus        79 ~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~  115 (272)
T PRK08159         79 FETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDN  115 (272)
T ss_pred             HHHHHHhcCCCcEEEECCcccCccccccCcccCCHHH
Confidence            99999999999999999998642   13555665544

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.72  E-value=8.4e-17  Score=118.15  Aligned_cols=102  Identities=25%  Similarity=0.423  Sum_probs=82.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +.+|+++|||++++||++++++|+++|++|++++|+.   ....+..+++..    .+.++.++.+|+++.+++..++++
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~   75 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTA---ERLDEVAAEIDD----LGRRALAVPTDITDEDQCANLVAL   75 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHHHH----hCCceEEEecCCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999999873   334444444443    345678899999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      +.+.++++|+||||+|......++.+.+.
T Consensus        76 ~~~~~g~~d~vi~~ag~~~~~~~~~~~~~  104 (258)
T PRK07890         76 ALERFGRVDALVNNAFRVPSMKPLADADF  104 (258)
T ss_pred             HHHHcCCccEEEECCccCCCCCCcccCCH
Confidence            99999999999999998654345555443

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1e-16  Score=117.53  Aligned_cols=104  Identities=36%  Similarity=0.577  Sum_probs=83.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||++++||.+++++|++.|++|++++|+..   .+.+..+.+..    .+.++.++.+|+++.+++..+++
T Consensus         4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~---~~~~~~~~~~~----~~~~~~~~~~D~~~~~~i~~~~~   76 (253)
T PRK06172          4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAA---GGEETVALIRE----AGGEALFVACDVTRDAEVKALVE   76 (253)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHHHh----cCCceEEEEcCCCCHHHHHHHHH
Confidence            367899999999999999999999999999999999733   33344444443    34567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|++|||+|......++.+.+.+
T Consensus        77 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~  107 (253)
T PRK06172         77 QTIAAYGRLDYAFNNAGIEIEQGRLAEGSEA  107 (253)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCChhhCCHH
Confidence            9999999999999999986543345554443

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.72  E-value=5.2e-17  Score=120.79  Aligned_cols=105  Identities=23%  Similarity=0.344  Sum_probs=83.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChH----HHHHHHHHHHhccCCCCCCceEEEecCCChHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDK----DAKETLEMLREAKTPDAKDPMAISADLGFDENCKR  113 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  113 (149)
                      +++|+++||||++|||.++++.|+++|++|++++|+.....    .+.+..+++..    .+.++.++.+|+++.+++..
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~D~~~~~~i~~   79 (273)
T PRK08278          4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEA----AGGQALPLVGDVRDEDQVAA   79 (273)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHh----cCCceEEEEecCCCHHHHHH
Confidence            67899999999999999999999999999999998753221    12233333433    45567889999999999999


Q ss_pred             HHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          114 VVDEVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       114 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.++.+.++++|+||||+|+... .++.+.+.+
T Consensus        80 ~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~  112 (273)
T PRK08278         80 AVAKAVERFGGIDICVNNASAINL-TGTEDTPMK  112 (273)
T ss_pred             HHHHHHHHhCCCCEEEECCCCcCC-CCcccCCHH
Confidence            999999999999999999998654 456555543

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.72  E-value=8.9e-17  Score=118.33  Aligned_cols=101  Identities=28%  Similarity=0.491  Sum_probs=81.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||.+++++|++.|++|++++++ ...+++   .+.+..    .+..+.++.+|+++.+++..+++
T Consensus        12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~---~~~~~~----~~~~~~~~~~D~~~~~~i~~~~~   83 (258)
T PRK06935         12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDET---RRLIEK----EGRKVTFVQVDLTKPESAEKVVK   83 (258)
T ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHH---HHHHHh----cCCceEEEEcCCCCHHHHHHHHH
Confidence            4788999999999999999999999999999999886 222222   222322    34567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      ++.+.++++|++|||+|.... .++.+.+.
T Consensus        84 ~~~~~~g~id~li~~ag~~~~-~~~~~~~~  112 (258)
T PRK06935         84 EALEEFGKIDILVNNAGTIRR-APLLEYKD  112 (258)
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CCcccCCH
Confidence            999999999999999998654 45555543

>PLN02253 xanthoxin dehydrogenase

Probab=99.72  E-value=1.2e-16  Score=119.01  Aligned_cols=103  Identities=29%  Similarity=0.510  Sum_probs=81.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||+++|||.+++++|++.|++|++++++.   +...+..+++.     .+.++.++.+|++|.+++.++++
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~---~~~~~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~   86 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQD---DLGQNVCDSLG-----GEPNVCFFHCDVTVEDDVSRAVD   86 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHhc-----CCCceEEEEeecCCHHHHHHHHH
Confidence            46789999999999999999999999999999999863   22333333331     23467889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCC-CCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE-CGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~-~~~~~~~s~~  147 (149)
                      .+.+.++++|+||||||.... ...+.+.+.+
T Consensus        87 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~  118 (280)
T PLN02253         87 FTVDKFGTLDIMVNNAGLTGPPCPDIRNVELS  118 (280)
T ss_pred             HHHHHhCCCCEEEECCCcCCCCCCCcccCCHH
Confidence            999999999999999998643 1345555443

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.72  E-value=1e-16  Score=117.91  Aligned_cols=102  Identities=27%  Similarity=0.409  Sum_probs=81.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||+++|||.+++++|++.|++|++++++.  ..   +..+.+..    .+..+.++.+|+++.+++..+++
T Consensus         7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~--~~---~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~   77 (253)
T PRK08993          7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE--PT---ETIEQVTA----LGRRFLSLTADLRKIDGIPALLE   77 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc--hH---HHHHHHHh----cCCeEEEEECCCCCHHHHHHHHH
Confidence            57899999999999999999999999999999887652  22   22233333    34456788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.++++|++|||||+... .++.+.+.++
T Consensus        78 ~~~~~~~~~D~li~~Ag~~~~-~~~~~~~~~~  108 (253)
T PRK08993         78 RAVAEFGHIDILVNNAGLIRR-EDAIEFSEKD  108 (253)
T ss_pred             HHHHHhCCCCEEEECCCCCCC-CCcccCCHHH
Confidence            999999999999999998654 5566665443

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.6e-16  Score=116.40  Aligned_cols=102  Identities=31%  Similarity=0.444  Sum_probs=81.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||+++|||.+++++|++.|++|++++|+.   ..+....+++..    .+..+.++.+|+++.++++.+++
T Consensus         5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~---~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   77 (252)
T PRK07035          5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKL---DGCQAVADAIVA----AGGKAEALACHIGEMEQIDALFA   77 (252)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHh----cCCeEEEEEcCCCCHHHHHHHHH
Confidence            47789999999999999999999999999999999863   334444444443    34457788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      ++.+.++++|+||||+|......++.+.+
T Consensus        78 ~~~~~~~~id~li~~ag~~~~~~~~~~~~  106 (252)
T PRK07035         78 HIRERHGRLDILVNNAAANPYFGHILDTD  106 (252)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCCcccCC
Confidence            99999999999999999753223444443

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.8e-16  Score=117.13  Aligned_cols=102  Identities=28%  Similarity=0.459  Sum_probs=82.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .++++++||||+++|||.+++++|+++|++|++++|+.   +.+.+..+.+..    .+..+.++.+|+++++++..+++
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~---~~~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~~~   79 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTE---SQLDEVAEQIRA----AGRRAHVVAADLAHPEATAGLAG   79 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHH
Confidence            46789999999999999999999999999999999973   333444444433    34567888999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      ++.+.++++|+||||||.... ..+.+.+.
T Consensus        80 ~~~~~~~~id~vi~~Ag~~~~-~~~~~~~~  108 (263)
T PRK07814         80 QAVEAFGRLDIVVNNVGGTMP-NPLLSTST  108 (263)
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CChhhCCH
Confidence            999999999999999998654 44555443

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.71  E-value=4.4e-16  Score=117.14  Aligned_cols=100  Identities=29%  Similarity=0.407  Sum_probs=82.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           35 SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        35 ~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      ...+++++++||||++|||+++|+.|++.|++|++++|+   .+.+.+..+++..    .+..+.++.+|++|.+++.++
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~---~~~l~~~~~~l~~----~~~~~~~~~~Dl~d~~~v~~~  107 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARR---EDLLDAVADRITR----AGGDAMAVPCDLSDLDAVDAL  107 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHH
Confidence            345788999999999999999999999999999999997   3334444444443    344577899999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYECGSVE  142 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~~~~~~  142 (149)
                      ++.+.+.++++|++|||||+... .++.
T Consensus       108 ~~~~~~~~g~id~li~~AG~~~~-~~~~  134 (293)
T PRK05866        108 VADVEKRIGGVDILINNAGRSIR-RPLA  134 (293)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCC-cchh
Confidence            99999999999999999998754 3443

>PRK08643 acetoin reductase; Validated

Probab=99.71  E-value=1.9e-16  Score=116.27  Aligned_cols=99  Identities=29%  Similarity=0.454  Sum_probs=80.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +|+++|||++++||.++++.|++.|++|++++|+..   ...+...++..    .+..+.++.+|++++++++.++.++.
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~---~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~   74 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEE---TAQAAADKLSK----DGGKAIAVKADVSDRDQVFAAVRQVV   74 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHh----cCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            689999999999999999999999999999998732   33333444433    34567789999999999999999999


Q ss_pred             HhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          120 NAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      ++++++|+||||+|+... .++.+.+.
T Consensus        75 ~~~~~id~vi~~ag~~~~-~~~~~~~~  100 (256)
T PRK08643         75 DTFGDLNVVVNNAGVAPT-TPIETITE  100 (256)
T ss_pred             HHcCCCCEEEECCCCCCC-CCcccCCH
Confidence            999999999999998654 45555443

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=2e-16  Score=116.69  Aligned_cols=104  Identities=22%  Similarity=0.195  Sum_probs=79.1

Q ss_pred             CCCCCEEEEecC--CChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRGMVALVTGG--DSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~--s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .+.+|+++|||+  ++|||+++|+.|++.|++|++++|+.. .+.+++..++       .+..+.++.+|+++.++++++
T Consensus         4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~-~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~i~~~   75 (256)
T PRK07889          4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRA-LRLTERIAKR-------LPEPAPVLELDVTNEEHLASL   75 (256)
T ss_pred             cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccc-hhHHHHHHHh-------cCCCCcEEeCCCCCHHHHHHH
Confidence            367899999999  899999999999999999999987521 1112222221       123567889999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCCC---CCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYEC---GSVEDIDESR  148 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~~---~~~~~~s~~~  148 (149)
                      ++++.+.++++|+||||||+....   .++.+.+.++
T Consensus        76 ~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~  112 (256)
T PRK07889         76 ADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWED  112 (256)
T ss_pred             HHHHHHHcCCCcEEEEccccccccccCCCcccCCHHH
Confidence            999999999999999999986421   2344544443

>PRK05717 oxidoreductase; Validated

Probab=99.71  E-value=1.3e-16  Score=117.35  Aligned_cols=102  Identities=25%  Similarity=0.334  Sum_probs=80.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           35 SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        35 ~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      ...+++|+++|||++++||.++|++|++.|++|++++++..   ...+..+.       .+..+.++.+|+++.+++..+
T Consensus         5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~---~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~   74 (255)
T PRK05717          5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRE---RGSKVAKA-------LGENAWFIAMDVADEAQVAAG   74 (255)
T ss_pred             CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHH---HHHHHHHH-------cCCceEEEEccCCCHHHHHHH
Confidence            34578999999999999999999999999999999988632   22222221       234577899999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCCC-CCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYEC-GSVEDIDE  146 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~~-~~~~~~s~  146 (149)
                      ++++.+.++++|+||||+|+.... .++.+.+.
T Consensus        75 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~  107 (255)
T PRK05717         75 VAEVLGQFGRLDALVCNAAIADPHNTTLESLSL  107 (255)
T ss_pred             HHHHHHHhCCCCEEEECCCcccCCCCChhhCCH
Confidence            999999999999999999986531 34444443

>PRK09242 tropinone reductase; Provisional

Probab=99.70  E-value=2.2e-16  Score=116.12  Aligned_cols=106  Identities=29%  Similarity=0.404  Sum_probs=84.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +.+++|+++|||++++||.+++++|++.|++|++++|+.   +.+.+..+++....  .+.++.++.+|+++.+++..++
T Consensus         5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~---~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~~~~~~   79 (257)
T PRK09242          5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDA---DALAQARDELAEEF--PEREVHGLAADVSDDEDRRAIL   79 (257)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHHHhhC--CCCeEEEEECCCCCHHHHHHHH
Confidence            357899999999999999999999999999999999873   33444444443310  1456788899999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +++.+.++++|+||||+|.... .++.+.+.+
T Consensus        80 ~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~  110 (257)
T PRK09242         80 DWVEDHWDGLHILVNNAGGNIR-KAAIDYTED  110 (257)
T ss_pred             HHHHHHcCCCCEEEECCCCCCC-CChhhCCHH
Confidence            9999999999999999998543 455555443

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.70  E-value=1.8e-16  Score=120.21  Aligned_cols=92  Identities=22%  Similarity=0.273  Sum_probs=75.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-CcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEG-ATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .+|+++|||+++|||+++++.|++.| ++|++++|+.   ....+..+++..    .+..+.++.+|+++.+++++++++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~---~~~~~~~~~l~~----~~~~~~~~~~Dl~~~~~v~~~~~~   74 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDF---LKAEQAAKSLGM----PKDSYTIMHLDLGSLDSVRQFVQQ   74 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCH---HHHHHHHHHhcC----CCCeEEEEEcCCCCHHHHHHHHHH
Confidence            46799999999999999999999999 9999999873   333344444432    334567888999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~  137 (149)
                      +.+.++++|+||||||+..+
T Consensus        75 ~~~~~~~iD~lI~nAG~~~~   94 (314)
T TIGR01289        75 FRESGRPLDALVCNAAVYFP   94 (314)
T ss_pred             HHHhCCCCCEEEECCCcccc
Confidence            98888999999999998543

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.70  E-value=2.1e-16  Score=115.99  Aligned_cols=100  Identities=29%  Similarity=0.487  Sum_probs=80.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +|+++|||+++|||.++++.|++.|++|++++|+.   ..+.+..+++..    .+..+.++.+|++++++++++++++.
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~---~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~   73 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTK---EKLEEAKLEIEQ----FPGQVLTVQMDVRNPEDVQKMVEQID   73 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHh----cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999873   233333344433    33467789999999999999999999


Q ss_pred             HhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          120 NAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +.++++|+||||+|.... .++.+.+.+
T Consensus        74 ~~~~~id~lI~~ag~~~~-~~~~~~~~~  100 (252)
T PRK07677         74 EKFGRIDALINNAAGNFI-CPAEDLSVN  100 (252)
T ss_pred             HHhCCccEEEECCCCCCC-CCcccCCHH
Confidence            999999999999997543 455555544

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.70  E-value=2.8e-16  Score=119.43  Aligned_cols=93  Identities=26%  Similarity=0.267  Sum_probs=76.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +.+|+++|||+++|||.++++.|++.|++|++++|+   ...+.+..+++..    ....+.++.+|+++.+++..++++
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~---~~~~~~~~~~l~~----~~~~~~~~~~Dl~~~~~v~~~~~~   76 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRN---LKKAEAAAQELGI----PPDSYTIIHIDLGDLDSVRRFVDD   76 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHhhc----cCCceEEEEecCCCHHHHHHHHHH
Confidence            468899999999999999999999999999999986   3334444444432    234577889999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~  137 (149)
                      +.+.++++|+||||||+...
T Consensus        77 ~~~~~~~iD~li~nAg~~~~   96 (322)
T PRK07453         77 FRALGKPLDALVCNAAVYMP   96 (322)
T ss_pred             HHHhCCCccEEEECCcccCC
Confidence            88877889999999998543

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.70  E-value=1.2e-16  Score=111.70  Aligned_cols=104  Identities=30%  Similarity=0.403  Sum_probs=84.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .++.|.++|||+++|||+++++.|++.|++|++.+++..   .+++....+..    + ..-..+.||+++.++++..++
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~---~A~ata~~L~g----~-~~h~aF~~DVS~a~~v~~~l~   82 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSA---AAEATAGDLGG----Y-GDHSAFSCDVSKAHDVQNTLE   82 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchh---hHHHHHhhcCC----C-CccceeeeccCcHHHHHHHHH
Confidence            357789999999999999999999999999999998733   33334333322    2 344578899999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      +..+.+|.+++||||||+... ..+..++.++|
T Consensus        83 e~~k~~g~psvlVncAGItrD-~~Llrmkq~qw  114 (256)
T KOG1200|consen   83 EMEKSLGTPSVLVNCAGITRD-GLLLRMKQEQW  114 (256)
T ss_pred             HHHHhcCCCcEEEEcCccccc-cceeeccHHHH
Confidence            999999999999999999876 56666666554

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.70  E-value=5.7e-16  Score=114.34  Aligned_cols=101  Identities=33%  Similarity=0.418  Sum_probs=80.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||+++|||.+++++|++.|++|++++|+.   ..+.+..++       ...++.++.+|+++.+++..+++
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~   72 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSA---EKLASLRQR-------FGDHVLVVEGDVTSYADNQRAVD   72 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHH-------hCCcceEEEccCCCHHHHHHHHH
Confidence            36789999999999999999999999999999999863   233222221       22356788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||+|+.....++.+.+.+
T Consensus        73 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~  103 (263)
T PRK06200         73 QTVDAFGKLDCFVGNAGIWDYNTSLVDIPAE  103 (263)
T ss_pred             HHHHhcCCCCEEEECCCCcccCCCcccCChh
Confidence            9999999999999999986432455555443

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.70  E-value=3.5e-16  Score=116.31  Aligned_cols=94  Identities=26%  Similarity=0.424  Sum_probs=79.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||+++|||++++++|++.|++|++++|+.   +...+..+++..    .+.++.++.+|+++.+++..+++
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~v~~~~~   79 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQ---EKAEAVVAEIKA----AGGEALAVKADVLDKESLEQARQ   79 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHh----cCCeEEEEECCCCCHHHHHHHHH
Confidence            46789999999999999999999999999999999873   334444444543    34567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~  137 (149)
                      ++.+.++++|+||||+|...+
T Consensus        80 ~~~~~~g~id~li~~ag~~~~  100 (278)
T PRK08277         80 QILEDFGPCDILINGAGGNHP  100 (278)
T ss_pred             HHHHHcCCCCEEEECCCCCCc
Confidence            999999999999999997543

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.69  E-value=4.3e-16  Score=114.90  Aligned_cols=104  Identities=23%  Similarity=0.514  Sum_probs=83.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||++++||.+++++|++.|++|+++.++.  .+......+++..    .+.++.++.+|+++.+++.++++
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~--~~~~~~~~~~l~~----~~~~~~~~~~Dl~~~~~i~~~~~   77 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSD--EEEANDVAEEIKK----AGGEAIAVKGDVTVESDVVNLIQ   77 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHHHHH----cCCeEEEEEecCCCHHHHHHHHH
Confidence            37889999999999999999999999999998888752  2334444444543    34567788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||+|.... .++.+.+.+
T Consensus        78 ~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~  107 (261)
T PRK08936         78 TAVKEFGTLDVMINNAGIENA-VPSHEMSLE  107 (261)
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CChhhCCHH
Confidence            999999999999999998654 455554443

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.69  E-value=4.4e-16  Score=114.58  Aligned_cols=106  Identities=25%  Similarity=0.435  Sum_probs=82.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC-ChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ-EDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      .+++|+++|||+++|||.++|+.|++.|++|+++.++.. ......+..+++..    .+.++.++.+|+++++++++++
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~~   80 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKA----AGAKAVAFQADLTTAAAVEKLF   80 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHH----hCCcEEEEecCcCCHHHHHHHH
Confidence            467899999999999999999999999999776665432 23334444444443    3446778899999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +++.+.++++|++|||||.... .++.+.+.+
T Consensus        81 ~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~  111 (257)
T PRK12744         81 DDAKAAFGRPDIAINTVGKVLK-KPIVEISEA  111 (257)
T ss_pred             HHHHHhhCCCCEEEECCcccCC-CCcccCCHH
Confidence            9999999999999999998654 455554433

>PRK12743 oxidoreductase; Provisional

Probab=99.69  E-value=4e-16  Score=114.81  Aligned_cols=100  Identities=33%  Similarity=0.436  Sum_probs=80.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +|+++||||+++||.+++++|++.|++|++++++.  ........+++..    .+.++.++.+|+++.++++.+++++.
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~   75 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSD--EEGAKETAEEVRS----HGVRAEIRQLDLSDLPEGAQALDKLI   75 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCC--hHHHHHHHHHHHh----cCCceEEEEccCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999998887642  3334444445544    45678889999999999999999999


Q ss_pred             HhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          120 NAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      +.++++|+||||+|.... ..+.+.+.
T Consensus        76 ~~~~~id~li~~ag~~~~-~~~~~~~~  101 (256)
T PRK12743         76 QRLGRIDVLVNNAGAMTK-APFLDMDF  101 (256)
T ss_pred             HHcCCCCEEEECCCCCCC-CChhhCCH
Confidence            999999999999998654 44544443

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.69  E-value=4.2e-16  Score=115.39  Aligned_cols=103  Identities=22%  Similarity=0.423  Sum_probs=82.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||+++|||.+++++|++.|++|++++|+.   +.+.+..+++..    .+.++.++.+|+++.+++..+++
T Consensus         6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~i~~~~~   78 (264)
T PRK07576          6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQ---EKVDAAVAQLQQ----AGPEGLGVSADVRDYAAVEAAFA   78 (264)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHH----hCCceEEEECCCCCHHHHHHHHH
Confidence            46789999999999999999999999999999999873   333333334433    33456788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|++|||+|.... .++.+.+.+
T Consensus        79 ~~~~~~~~iD~vi~~ag~~~~-~~~~~~~~~  108 (264)
T PRK07576         79 QIADEFGPIDVLVSGAAGNFP-APAAGMSAN  108 (264)
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CccccCCHH
Confidence            999999999999999987544 455555443

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.69  E-value=2.5e-16  Score=116.32  Aligned_cols=91  Identities=33%  Similarity=0.446  Sum_probs=76.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||+++|||++++++|++.|++|++++|+.   ..+.+..++       .+..+.++.+|+++.+++.++++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~   72 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDA---DNGAAVAAS-------LGERARFIATDITDDAAIERAVA   72 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHH-------hCCeeEEEEecCCCHHHHHHHHH
Confidence            36789999999999999999999999999999999973   223222222       13457788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~  137 (149)
                      ++.+.++++|+||||+|....
T Consensus        73 ~~~~~~g~id~lv~~ag~~~~   93 (261)
T PRK08265         73 TVVARFGRVDILVNLACTYLD   93 (261)
T ss_pred             HHHHHhCCCCEEEECCCCCCC
Confidence            999999999999999998543

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.69  E-value=4.5e-16  Score=114.77  Aligned_cols=101  Identities=31%  Similarity=0.430  Sum_probs=81.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+|+++|||++++||+.++++|+++|++|++++|+..    ..+..+++..    .+.++.++.+|+++.++++.+++
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~----~~~~~~~~~~----~~~~~~~~~~Dl~~~~~v~~~~~   74 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE----IEKLADELCG----RGHRCTAVVADVRDPASVAAAIK   74 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH----HHHHHHHHHH----hCCceEEEECCCCCHHHHHHHHH
Confidence            367899999999999999999999999999999998631    2233333332    34567788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      ++.+.++++|+||||+|.... .++.+.+.
T Consensus        75 ~~~~~~~~id~vi~~ag~~~~-~~~~~~~~  103 (263)
T PRK08226         75 RAKEKEGRIDILVNNAGVCRL-GSFLDMSD  103 (263)
T ss_pred             HHHHHcCCCCEEEECCCcCCC-CCcccCCH
Confidence            999999999999999998654 45555543

>PRK06398 aldose dehydrogenase; Validated

Probab=99.69  E-value=2.6e-16  Score=116.14  Aligned_cols=93  Identities=35%  Similarity=0.528  Sum_probs=78.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||+++|||++++++|++.|++|++++|+...                  ...+.++.||+++++++..+++
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~------------------~~~~~~~~~D~~~~~~i~~~~~   64 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS------------------YNDVDYFKVDVSNKEQVIKGID   64 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc------------------cCceEEEEccCCCHHHHHHHHH
Confidence            3678999999999999999999999999999999986321                  1246788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.++++|+||||||+... .++.+.+.++
T Consensus        65 ~~~~~~~~id~li~~Ag~~~~-~~~~~~~~~~   95 (258)
T PRK06398         65 YVISKYGRIDILVNNAGIESY-GAIHAVEEDE   95 (258)
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CCcccCCHHH
Confidence            999999999999999998654 5666665543

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.69  E-value=5.6e-16  Score=114.06  Aligned_cols=102  Identities=30%  Similarity=0.498  Sum_probs=81.9

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           35 SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        35 ~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      ...+++|++||||++++||..++++|++.|++|++++|+.   ..+....+++..    .+.++.++.+|++|.++++.+
T Consensus         7 ~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~---~~~~~~~~~i~~----~~~~~~~~~~Dl~d~~~i~~~   79 (259)
T PRK08213          7 LFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKA---EELEEAAAHLEA----LGIDALWIAADVADEADIERL   79 (259)
T ss_pred             hhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHHHh----cCCeEEEEEccCCCHHHHHHH
Confidence            3457889999999999999999999999999999999863   333344444443    345677899999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYECGSVEDI  144 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~  144 (149)
                      ++++.+.++++|++|||+|.... .++.+.
T Consensus        80 ~~~~~~~~~~id~vi~~ag~~~~-~~~~~~  108 (259)
T PRK08213         80 AEETLERFGHVDILVNNAGATWG-APAEDH  108 (259)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCC-CChhhC
Confidence            99999999999999999998654 344433

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.69  E-value=4.6e-16  Score=114.86  Aligned_cols=98  Identities=34%  Similarity=0.460  Sum_probs=77.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|+++||||++|||++++++|++.|++|++++|+.   +.+.+.    ...   .+..+.++.+|+++.+++..++++
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~l----~~~---~~~~~~~~~~D~~~~~~~~~~~~~   72 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSA---AGLQEL----EAA---HGDAVVGVEGDVRSLDDHKEAVAR   72 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH---HHHHHH----Hhh---cCCceEEEEeccCCHHHHHHHHHH
Confidence            5789999999999999999999999999999999863   222222    110   234577889999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      +.+.++++|+||||||+.....++.+.+
T Consensus        73 ~~~~~g~id~li~~Ag~~~~~~~~~~~~  100 (262)
T TIGR03325        73 CVAAFGKIDCLIPNAGIWDYSTALVDIP  100 (262)
T ss_pred             HHHHhCCCCEEEECCCCCccCCccccCC
Confidence            9999999999999999754323444433

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.69  E-value=5.3e-16  Score=113.39  Aligned_cols=99  Identities=30%  Similarity=0.439  Sum_probs=79.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||++++||.+++++|+++|++|++++|+.  ..++   .+.+..    .+..+.++.+|+++.+++..+++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~---~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   72 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSET---QQQVEA----LGRRFLSLTADLSDIEAIKALVD   72 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHH---HHHHHh----cCCceEEEECCCCCHHHHHHHHH
Confidence            36889999999999999999999999999999999863  2222   222222    33457889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      ++.+.++++|++|||+|.... .++.+.+
T Consensus        73 ~~~~~~~~~d~li~~ag~~~~-~~~~~~~  100 (248)
T TIGR01832        73 SAVEEFGHIDILVNNAGIIRR-ADAEEFS  100 (248)
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CChhhCC
Confidence            999999999999999998654 4444443

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.69  E-value=5.8e-16  Score=113.83  Aligned_cols=99  Identities=27%  Similarity=0.475  Sum_probs=81.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||++++||..+++.|+++|++|++++|++.   ...+..+++..    .+..+.++.+|+++.+++..++.
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~---~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~   76 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQD---GANAVADEINK----AGGKAIGVAMDVTNEDAVNAGID   76 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChH---HHHHHHHHHHh----cCceEEEEECCCCCHHHHHHHHH
Confidence            367899999999999999999999999999999999743   33344444443    34567789999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVED  143 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~  143 (149)
                      .+.+.++++|+||||+|.... .++.+
T Consensus        77 ~~~~~~~~~d~vi~~ag~~~~-~~~~~  102 (262)
T PRK13394         77 KVAERFGSVDILVSNAGIQIV-NPIEN  102 (262)
T ss_pred             HHHHHcCCCCEEEECCccCCC-Cchhh
Confidence            999999999999999998654 44443

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.69  E-value=5.9e-16  Score=114.05  Aligned_cols=107  Identities=28%  Similarity=0.433  Sum_probs=83.0

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCcEEEEecCCC--------ChHHHHHHHHHHHhccCCCCCCceEEEecCC
Q 044851           37 KLRGMVALVTGGD--SGIGRAVCHCFAQEGATVAFTYVKPQ--------EDKDAKETLEMLREAKTPDAKDPMAISADLG  106 (149)
Q Consensus        37 ~~~~~~~litG~s--~gig~~~a~~L~~~g~~Vi~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~  106 (149)
                      .+++|+++|||++  +|||.++|++|+++|++|+++++...        ...+..+..+++..    .+.++.++.+|++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~~~~D~~   78 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK----NGVKVSSMELDLT   78 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHh----cCCeEEEEEcCCC
Confidence            5789999999998  49999999999999999988764311        11222233333433    4567788999999


Q ss_pred             ChHHHHHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          107 FDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       107 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +.+++.+++.++.+.++++|+||||+|.... .++.+.+.++
T Consensus        79 ~~~~i~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~  119 (256)
T PRK12859         79 QNDAPKELLNKVTEQLGYPHILVNNAAYSTN-NDFSNLTAEE  119 (256)
T ss_pred             CHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CChhhCCHHH
Confidence            9999999999999999999999999998654 5666666543

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.68  E-value=5.6e-16  Score=113.11  Aligned_cols=103  Identities=25%  Similarity=0.324  Sum_probs=80.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|+++|||++++||..++++|++.|++|++..++  ......+..+++..    .+.++.++.+|+++.+++.+++++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~   74 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGP--NSPRRVKWLEDQKA----LGFDFIASEGNVGDWDSTKAAFDK   74 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCC--ChHHHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHHHH
Confidence            467899999999999999999999999998875542  12233344444443    455677889999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +.+.++++|+||||+|.... .++.+.+.+
T Consensus        75 ~~~~~~~id~li~~ag~~~~-~~~~~~~~~  103 (246)
T PRK12938         75 VKAEVGEIDVLVNNAGITRD-VVFRKMTRE  103 (246)
T ss_pred             HHHHhCCCCEEEECCCCCCC-CChhhCCHH
Confidence            99999999999999998654 345554433

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.68  E-value=4.1e-16  Score=115.35  Aligned_cols=92  Identities=23%  Similarity=0.323  Sum_probs=72.3

Q ss_pred             CCCCCEEEEecC--CChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRGMVALVTGG--DSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~--s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .+++|+++|||+  ++|||+++|++|++.|++|+++++.....    +.++++...   .+ ...++.+|++|+++++++
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~----~~~~~~~~~---~~-~~~~~~~Dv~d~~~v~~~   74 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK----DRITEFAAE---FG-SDLVFPCDVASDEQIDAL   74 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHH----HHHHHHHHh---cC-CcceeeccCCCHHHHHHH
Confidence            367899999996  67999999999999999999887642212    222333221   12 234688999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~  136 (149)
                      ++++.++++++|+||||||+..
T Consensus        75 ~~~~~~~~g~iD~lvnnAG~~~   96 (260)
T PRK06997         75 FASLGQHWDGLDGLVHSIGFAP   96 (260)
T ss_pred             HHHHHHHhCCCcEEEEccccCC
Confidence            9999999999999999999864

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.68  E-value=8.9e-16  Score=113.01  Aligned_cols=102  Identities=28%  Similarity=0.346  Sum_probs=80.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      ..+|+++|||++++||..++++|++.|++|+++.++.  .........++..    .+..+.++.+|++|.+++.+++++
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~   80 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRS--RDEAEALAAEIRA----LGRRAVALQADLADEAEVRALVAR   80 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHHHHh----cCCeEEEEEcCCCCHHHHHHHHHH
Confidence            3578999999999999999999999999998877642  2233334444433    345677899999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      +.+.++++|+||||||.... .++.+.+.
T Consensus        81 ~~~~~~~iD~vi~~ag~~~~-~~~~~~~~  108 (258)
T PRK09134         81 ASAALGPITLLVNNASLFEY-DSAASFTR  108 (258)
T ss_pred             HHHHcCCCCEEEECCcCCCC-CccccCCH
Confidence            99999999999999998654 45555443

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.3e-15  Score=114.99  Aligned_cols=96  Identities=29%  Similarity=0.415  Sum_probs=78.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++||||++|||.++|++|++.|++|++++|+.   +...+..+++....  .+..+.++.+|+++.+++.++++
T Consensus        13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~---~~~~~~~~~l~~~~--~~~~~~~~~~Dl~d~~~v~~~~~   87 (306)
T PRK06197         13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNL---DKGKAAAARITAAT--PGADVTLQELDLTSLASVRAAAD   87 (306)
T ss_pred             cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHHhC--CCCceEEEECCCCCHHHHHHHHH
Confidence            46889999999999999999999999999999999873   33333344443210  23457788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~  137 (149)
                      ++.+.++++|+||||||+..+
T Consensus        88 ~~~~~~~~iD~li~nAg~~~~  108 (306)
T PRK06197         88 ALRAAYPRIDLLINNAGVMYT  108 (306)
T ss_pred             HHHhhCCCCCEEEECCccccC
Confidence            999999999999999998653

>PRK05599 hypothetical protein; Provisional

Probab=99.68  E-value=5.8e-16  Score=113.59  Aligned_cols=90  Identities=20%  Similarity=0.241  Sum_probs=73.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      ++++|||+++|||+++|++|+ +|++|++++|+.   +.+++..+++...   ....+.++.||++|.++++++++++.+
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~---~~~~~~~~~l~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~   73 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRP---EAAQGLASDLRQR---GATSVHVLSFDAQDLDTHRELVKQTQE   73 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCH---HHHHHHHHHHHhc---cCCceEEEEcccCCHHHHHHHHHHHHH
Confidence            469999999999999999999 599999999873   3444555555431   123467889999999999999999999


Q ss_pred             hcCCccEEEeCCcCCCC
Q 044851          121 AYDRIDILVNNAAEQYE  137 (149)
Q Consensus       121 ~~g~id~li~~ag~~~~  137 (149)
                      .+|++|++|||+|+...
T Consensus        74 ~~g~id~lv~nag~~~~   90 (246)
T PRK05599         74 LAGEISLAVVAFGILGD   90 (246)
T ss_pred             hcCCCCEEEEecCcCCC
Confidence            99999999999998654

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.68  E-value=8.2e-16  Score=113.33  Aligned_cols=98  Identities=28%  Similarity=0.308  Sum_probs=78.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      +++|||+++|||++++++|++.|++|++++|+.   ..+.+..+++..    . ..+.++.+|+++.++++++++++.+.
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~---~~~~~~~~~l~~----~-~~~~~~~~Dv~d~~~~~~~~~~~~~~   73 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNE---ENLEKALKELKE----Y-GEVYAVKADLSDKDDLKNLVKEAWEL   73 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHHHh----c-CCceEEEcCCCCHHHHHHHHHHHHHh
Confidence            599999999999999999999999999999873   344444454543    2 25778999999999999999999999


Q ss_pred             cCCccEEEeCCcCCCC-CCCCCCCCCC
Q 044851          122 YDRIDILVNNAAEQYE-CGSVEDIDES  147 (149)
Q Consensus       122 ~g~id~li~~ag~~~~-~~~~~~~s~~  147 (149)
                      ++++|+||||+|.... ...+.+.+.+
T Consensus        74 ~g~id~li~naG~~~~~~~~~~~~~~~  100 (259)
T PRK08340         74 LGGIDALVWNAGNVRCEPCMLHEAGYS  100 (259)
T ss_pred             cCCCCEEEECCCCCCCCccccccccHH
Confidence            9999999999997542 1234454443

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.68  E-value=7.9e-16  Score=112.53  Aligned_cols=99  Identities=37%  Similarity=0.518  Sum_probs=80.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|+++|||++++||..++++|++.|++|++++|+.   +...+..+++.     .+.++.++.+|++|.+++++++++
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~---~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~   74 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDA---EAAERVAAAIA-----AGGRAFARQGDVGSAEAVEALVDF   74 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCH---HHHHHHHHHHh-----cCCeEEEEEcCCCCHHHHHHHHHH
Confidence            5789999999999999999999999999999999873   23333333332     234578899999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      +.++++++|+||||+|.... ..+.+.+
T Consensus        75 i~~~~~~id~vi~~ag~~~~-~~~~~~~  101 (252)
T PRK06138         75 VAARWGRLDVLVNNAGFGCG-GTVVTTD  101 (252)
T ss_pred             HHHHcCCCCEEEECCCCCCC-CCcccCC
Confidence            99999999999999998654 4444443

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.67  E-value=1.2e-15  Score=112.15  Aligned_cols=94  Identities=26%  Similarity=0.456  Sum_probs=78.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+|+++|||++++||.+++++|+++|++|++++|+.   +...+...++..    .+.++.++.+|+++.+++.+++.
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~---~~~~~~~~~l~~----~~~~~~~~~~D~~~~~~i~~~~~   80 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINA---DAANHVVDEIQQ----LGGQAFACRCDITSEQELSALAD   80 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCH---HHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHH
Confidence            46789999999999999999999999999999998863   333344444443    34567788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~  137 (149)
                      .+.+.++++|++|||+|....
T Consensus        81 ~~~~~~~~~d~li~~ag~~~~  101 (255)
T PRK06113         81 FALSKLGKVDILVNNAGGGGP  101 (255)
T ss_pred             HHHHHcCCCCEEEECCCCCCC
Confidence            999999999999999998654

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=1e-15  Score=111.31  Aligned_cols=101  Identities=31%  Similarity=0.425  Sum_probs=81.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++++++|||++++||..++++|+++|++|++++|+.   ....+...++..    .+.++.++.+|+++.+++..+++
T Consensus         4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~---~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   76 (239)
T PRK07666          4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTE---ENLKAVAEEVEA----YGVKVVIATADVSDYEEVTAAIE   76 (239)
T ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHH----hCCeEEEEECCCCCHHHHHHHHH
Confidence            35678999999999999999999999999999999973   333344444433    34567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      ++.+.++++|++|||+|.... ..+.+.+
T Consensus        77 ~~~~~~~~id~vi~~ag~~~~-~~~~~~~  104 (239)
T PRK07666         77 QLKNELGSIDILINNAGISKF-GKFLELD  104 (239)
T ss_pred             HHHHHcCCccEEEEcCccccC-CCcccCC
Confidence            999999999999999998654 4444444

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1e-15  Score=112.55  Aligned_cols=93  Identities=37%  Similarity=0.471  Sum_probs=78.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..++++++|||||+++||.+++++|+++|++|++++|+....    +..+++..    .+.++.++.+|+++.+++..++
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~----~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~   74 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD----EFAEELRA----LQPRAEFVQVDLTDDAQCRDAV   74 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH----HHHHHHHh----cCCceEEEEccCCCHHHHHHHH
Confidence            357899999999999999999999999999999999874322    33344443    3456788999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~  136 (149)
                      +++.+.++.+|+||||+|...
T Consensus        75 ~~~~~~~~~id~vi~~ag~~~   95 (258)
T PRK08628         75 EQTVAKFGRIDGLVNNAGVND   95 (258)
T ss_pred             HHHHHhcCCCCEEEECCcccC
Confidence            999999999999999999754

>PRK05855 short chain dehydrogenase; Validated

Probab=99.67  E-value=6.9e-16  Score=124.69  Aligned_cols=104  Identities=29%  Similarity=0.371  Sum_probs=85.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.++++|||||++|||.+++++|++.|++|++++|+.   ..+.+..+++..    .+.++.++.+|+++.+++..+++
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~---~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~~~~~~~  384 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDE---AAAERTAELIRA----AGAVAHAYRVDVSDADAMEAFAE  384 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHh----cCCeEEEEEcCCCCHHHHHHHHH
Confidence            46778999999999999999999999999999999973   334444444443    34567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.++++|+||||||+... +++.+.+.++
T Consensus       385 ~~~~~~g~id~lv~~Ag~~~~-~~~~~~~~~~  415 (582)
T PRK05855        385 WVRAEHGVPDIVVNNAGIGMA-GGFLDTSAED  415 (582)
T ss_pred             HHHHhcCCCcEEEECCccCCC-CCcccCCHHH
Confidence            999999999999999999765 5666666543

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.67  E-value=6.3e-16  Score=112.98  Aligned_cols=98  Identities=18%  Similarity=0.216  Sum_probs=78.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +|+++|||+++|||.+++++|++.|++|++++|+..   ...+....+... . .+..+.++.+|+++.+++..+++++.
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~---~~~~~~~~~~~~-~-~~~~~~~~~~D~~~~~~~~~~~~~~~   76 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTD---RLEELKAELLAR-Y-PGIKVAVAALDVNDHDQVFEVFAEFR   76 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHHHhh-C-CCceEEEEEcCCCCHHHHHHHHHHHH
Confidence            578999999999999999999999999999999743   333333333321 0 24567889999999999999999999


Q ss_pred             HhcCCccEEEeCCcCCCCCCCCCC
Q 044851          120 NAYDRIDILVNNAAEQYECGSVED  143 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~~~~~~~  143 (149)
                      +.++++|++|||+|+... ..+.+
T Consensus        77 ~~~~~id~vi~~ag~~~~-~~~~~   99 (248)
T PRK08251         77 DELGGLDRVIVNAGIGKG-ARLGT   99 (248)
T ss_pred             HHcCCCCEEEECCCcCCC-CCcCc
Confidence            999999999999998665 44433

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1e-15  Score=111.50  Aligned_cols=101  Identities=34%  Similarity=0.512  Sum_probs=81.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|+++|||++++||+.+++.|+++|++|+++.++.  .....+..+++..    .+.++.++.+|+++.+++.+++++
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~   76 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGS--AAAADELVAEIEA----AGGRAIAVQADVADAAAVTRLFDA   76 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCC--HHHHHHHHHHHHh----cCCeEEEEECCCCCHHHHHHHHHH
Confidence            5678999999999999999999999999998887753  2233344444443    455688899999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      +.+.++++|++|||+|.... .++.+.+
T Consensus        77 ~~~~~~~id~vi~~ag~~~~-~~~~~~~  103 (245)
T PRK12937         77 AETAFGRIDVLVNNAGVMPL-GTIADFD  103 (245)
T ss_pred             HHHHcCCCCEEEECCCCCCC-CChhhCC
Confidence            99999999999999998653 4444443

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1.3e-15  Score=111.08  Aligned_cols=101  Identities=36%  Similarity=0.442  Sum_probs=81.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||++++||.++++.|+++|++|++++|+   .+.+....+++..    .+.++.++.+|+++.+++.++++
T Consensus         4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~---~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~   76 (250)
T PRK12939          4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGL---AAEARELAAALEA----AGGRAHAIAADLADPASVQRFFD   76 (250)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHH
Confidence            3678999999999999999999999999999999886   3334444444443    34567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      ++.+.++++|+||||+|.... ..+.+.+
T Consensus        77 ~~~~~~~~id~vi~~ag~~~~-~~~~~~~  104 (250)
T PRK12939         77 AAAAALGGLDGLVNNAGITNS-KSATELD  104 (250)
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CChhhCC
Confidence            999999999999999998654 4444433

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.67  E-value=8.2e-16  Score=114.06  Aligned_cols=97  Identities=34%  Similarity=0.354  Sum_probs=78.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++++++||||++|||.+++++|++.|++|++++|+.   +.+.+..+++        ..+.++.+|+++++++..+++.
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~---~~~~~~~~~~--------~~~~~~~~D~~~~~~~~~~~~~   71 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDE---ALAKETAAEL--------GLVVGGPLDVTDPASFAAFLDA   71 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHh--------ccceEEEccCCCHHHHHHHHHH
Confidence            5678999999999999999999999999999998863   3332222221        1367788999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      +.+.++++|++|||+|+... .++.+.+.
T Consensus        72 ~~~~~~~id~li~~ag~~~~-~~~~~~~~   99 (273)
T PRK07825         72 VEADLGPIDVLVNNAGVMPV-GPFLDEPD   99 (273)
T ss_pred             HHHHcCCCCEEEECCCcCCC-CccccCCH
Confidence            99999999999999998764 55555443

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.67  E-value=5.7e-16  Score=113.70  Aligned_cols=94  Identities=32%  Similarity=0.444  Sum_probs=78.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||+++|||++++++|++.|++|++++|+...           ..    .+..+.++.+|+++.+++..+++
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----------~~----~~~~~~~~~~D~~~~~~~~~~~~   67 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----------TV----DGRPAEFHAADVRDPDQVAALVD   67 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----------hh----cCCceEEEEccCCCHHHHHHHHH
Confidence            4678999999999999999999999999999999986321           01    23457788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      .+.+.++++|+||||+|+... ..+.+.+.
T Consensus        68 ~~~~~~~~id~vi~~ag~~~~-~~~~~~~~   96 (252)
T PRK07856         68 AIVERHGRLDVLVNNAGGSPY-ALAAEASP   96 (252)
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CCcccCCH
Confidence            999999999999999998654 45555443

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.67  E-value=7.1e-16  Score=113.77  Aligned_cols=104  Identities=29%  Similarity=0.388  Sum_probs=81.1

Q ss_pred             CCCCEEEEecCCC-hHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           38 LRGMVALVTGGDS-GIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        38 ~~~~~~litG~s~-gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +++|+++|||+++ |||.++++.|++.|++|++++|+..   .+.+..+++....  ...++.++.+|+++.+++..+++
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~   89 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHER---RLGETADELAAEL--GLGRVEAVVCDVTSEAQVDALID   89 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHHHHhc--CCceEEEEEccCCCHHHHHHHHH
Confidence            5689999999985 9999999999999999999988633   3333333333210  12357788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||+|.... ..+.+.+.+
T Consensus        90 ~~~~~~g~id~li~~ag~~~~-~~~~~~~~~  119 (262)
T PRK07831         90 AAVERLGRLDVLVNNAGLGGQ-TPVVDMTDD  119 (262)
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CCcccCCHH
Confidence            999999999999999998654 566665544

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1.7e-15  Score=111.18  Aligned_cols=101  Identities=30%  Similarity=0.383  Sum_probs=82.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||++++||.++++.|++.|++|++++|+.   +.+.+....+..    ...++.++.+|+++.+++.+++.
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~---~~~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~~~   78 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRV---ERLKELRAEIEA----EGGAAHVVSLDVTDYQSIKAAVA   78 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHh----cCCcEEEEEecCCCHHHHHHHHH
Confidence            47789999999999999999999999999999999973   334444444433    34457889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      ++.+.++++|++|||+|.... .++.+.+
T Consensus        79 ~~~~~~~~~d~li~~ag~~~~-~~~~~~~  106 (258)
T PRK06949         79 HAETEAGTIDILVNNSGVSTT-QKLVDVT  106 (258)
T ss_pred             HHHHhcCCCCEEEECCCCCCC-CCcccCC
Confidence            999999999999999998654 4454443

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.67  E-value=1.1e-15  Score=111.66  Aligned_cols=101  Identities=33%  Similarity=0.502  Sum_probs=79.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEE-ecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFT-YVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +.+++++|||++++||..++++|++.|++|+++ .|+   .+...+..+++..    .+.++.++.+|+++++++..+++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~---~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   74 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARS---RKAAEETAEEIEA----LGRKALAVKANVGDVEKIKEMFA   74 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHHHh----cCCeEEEEEcCCCCHHHHHHHHH
Confidence            457899999999999999999999999998764 554   2333344444443    34567888999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      ++.+.++++|+||||+|.... .++.+.+.
T Consensus        75 ~~~~~~~~id~vi~~ag~~~~-~~~~~~~~  103 (250)
T PRK08063         75 QIDEEFGRLDVFVNNAASGVL-RPAMELEE  103 (250)
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CCcccCCH
Confidence            999999999999999998654 45555443

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.67  E-value=1.4e-15  Score=111.10  Aligned_cols=100  Identities=38%  Similarity=0.623  Sum_probs=79.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|+++|||++++||..++++|+++|++|+++.++.  .....+..+.+..    .+.++.++.+|+++.+++.+++++
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~--~~~~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~~~~   77 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSS--KEAAENLVNELGK----EGHDVYAVQADVSKVEDANRLVEE   77 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCc--HHHHHHHHHHHHh----cCCeEEEEECCCCCHHHHHHHHHH
Confidence            5789999999999999999999999999988765542  2333344444443    445688899999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDI  144 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~  144 (149)
                      +.+.++++|+||||+|.... ..+.+.
T Consensus        78 ~~~~~~~id~vi~~ag~~~~-~~~~~~  103 (247)
T PRK12935         78 AVNHFGKVDILVNNAGITRD-RTFKKL  103 (247)
T ss_pred             HHHHcCCCCEEEECCCCCCC-CChhhC
Confidence            99999999999999998654 344443

>PRK06484 short chain dehydrogenase; Validated

Probab=99.67  E-value=7.7e-16  Score=123.68  Aligned_cols=102  Identities=25%  Similarity=0.337  Sum_probs=81.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+|++||||+++|||+++|++|++.|++|++++|+.   ..+.+..++       .+.++..+.+|++|++++.++++
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~---~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~  335 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDA---EGAKKLAEA-------LGDEHLSVQADITDEAAVESAFA  335 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHH-------hCCceeEEEccCCCHHHHHHHHH
Confidence            35789999999999999999999999999999999863   333333222       23346678999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.++++|+||||||+.....++.+.+.++
T Consensus       336 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~  367 (520)
T PRK06484        336 QIQARWGRLDVLVNNAGIAEVFKPSLEQSAED  367 (520)
T ss_pred             HHHHHcCCCCEEEECCCCcCCCCChhhCCHHH
Confidence            99999999999999999864334566655443

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.5e-15  Score=110.65  Aligned_cols=99  Identities=28%  Similarity=0.381  Sum_probs=79.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      +.|+++|||++++||..++++|+++|++|++++|+.   ++..+..+.+..    .+..+.++.+|+++.+++..+++.+
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~   77 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQ---DALEALAAELRS----TGVKAAAYSIDLSNPEAIAPGIAEL   77 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHh----CCCcEEEEEccCCCHHHHHHHHHHH
Confidence            357899999999999999999999999999999873   333344444433    3456788999999999999999999


Q ss_pred             HHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          119 VNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      .++++++|+||||+|.... .++.+.+
T Consensus        78 ~~~~~~id~lv~~ag~~~~-~~~~~~~  103 (241)
T PRK07454         78 LEQFGCPDVLINNAGMAYT-GPLLEMP  103 (241)
T ss_pred             HHHcCCCCEEEECCCccCC-CchhhCC
Confidence            9999999999999998654 4444443

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.66  E-value=1.7e-15  Score=111.08  Aligned_cols=99  Identities=34%  Similarity=0.510  Sum_probs=80.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|+++|||++++||.+++++|+++|++|++++|+..   .......++..    .+.++.++.+|+++.+++..+++.
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~---~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~   74 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDE---AAAAAAEALQK----AGGKAIGVAMDVTDEEAINAGIDY   74 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHH---HHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHHHH
Confidence            46789999999999999999999999999999999743   33344444443    345678899999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDI  144 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~  144 (149)
                      +.+.++.+|+||||+|.... ..+.+.
T Consensus        75 ~~~~~~~~d~vi~~a~~~~~-~~~~~~  100 (258)
T PRK12429         75 AVETFGGVDILVNNAGIQHV-APIEDF  100 (258)
T ss_pred             HHHHcCCCCEEEECCCCCCC-CChhhC
Confidence            99999999999999998654 444443

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.66  E-value=8.8e-16  Score=112.91  Aligned_cols=100  Identities=36%  Similarity=0.515  Sum_probs=80.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+|+++|||++++||.++++.|+++|++|++++|+.   +...+..+.+       ...+.++.+|+++.+++..+++
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~---~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~   72 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKP---ARARLAALEI-------GPAAIAVSLDVTRQDSIDRIVA   72 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCH---HHHHHHHHHh-------CCceEEEEccCCCHHHHHHHHH
Confidence            36789999999999999999999999999999999873   2232322222       2346788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||+|.... .++.+.+.+
T Consensus        73 ~~~~~~~~id~li~~ag~~~~-~~~~~~~~~  102 (257)
T PRK07067         73 AAVERFGGIDILFNNAALFDM-APILDISRD  102 (257)
T ss_pred             HHHHHcCCCCEEEECCCcCCC-CCcccCCHH
Confidence            999999999999999998654 455554433

>TIGR02415 23BDH acetoin reductases

Probab=99.66  E-value=1.5e-15  Score=111.32  Aligned_cols=99  Identities=28%  Similarity=0.455  Sum_probs=81.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      |+++|||++++||..++++|++.|++|++++|+   ...+.+..+++..    .+.++.++.+|+++++++.+++.++.+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~---~~~~~~~~~~l~~----~~~~~~~~~~Dl~~~~~i~~~~~~~~~   73 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLN---EETAKETAKEINQ----AGGKAVAYKLDVSDKDQVFSAIDQAAE   73 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHh----cCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            579999999999999999999999999999986   3334444444543    455678899999999999999999999


Q ss_pred             hcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          121 AYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       121 ~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      .++++|+||||+|.... .++.+.+.+
T Consensus        74 ~~~~id~vi~~ag~~~~-~~~~~~~~~   99 (254)
T TIGR02415        74 KFGGFDVMVNNAGVAPI-TPILEITEE   99 (254)
T ss_pred             HcCCCCEEEECCCcCCC-CCcccCCHH
Confidence            99999999999998654 456555543

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.1e-15  Score=112.44  Aligned_cols=90  Identities=21%  Similarity=0.300  Sum_probs=74.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      .++++|||+++|||.+++++|++.|++|++++|+.   +.+.+..+++..    .+ ++.++.+|+++.+++.++++++.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~---~~~~~~~~~~~~----~~-~~~~~~~Dl~~~~~i~~~~~~~~   73 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRT---DALQAFAARLPK----AA-RVSVYAADVRDADALAAAAADFI   73 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHhccc----CC-eeEEEEcCCCCHHHHHHHHHHHH
Confidence            36899999999999999999999999999999873   333333332221    22 67889999999999999999999


Q ss_pred             HhcCCccEEEeCCcCCCC
Q 044851          120 NAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~  137 (149)
                      ++++.+|+||||+|....
T Consensus        74 ~~~g~id~lv~~ag~~~~   91 (257)
T PRK07024         74 AAHGLPDVVIANAGISVG   91 (257)
T ss_pred             HhCCCCCEEEECCCcCCC
Confidence            999999999999998653

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.66  E-value=1.2e-15  Score=112.14  Aligned_cols=98  Identities=39%  Similarity=0.653  Sum_probs=78.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||+++|||.++|+.|++.|++|++++++.   ++.   .+++..    .  .+.++.+|+++.+++.++++
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~---~~~---~~~l~~----~--~~~~~~~Dl~~~~~~~~~~~   71 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA---ENE---AKELRE----K--GVFTIKCDVGNRDQVKKSKE   71 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCc---HHH---HHHHHh----C--CCeEEEecCCCHHHHHHHHH
Confidence            36789999999999999999999999999998887652   111   222222    1  36788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||+|+... .++.+.+.+
T Consensus        72 ~~~~~~~~id~li~~ag~~~~-~~~~~~~~~  101 (255)
T PRK06463         72 VVEKEFGRVDVLVNNAGIMYL-MPFEEFDEE  101 (255)
T ss_pred             HHHHHcCCCCEEEECCCcCCC-CChhhCCHH
Confidence            999999999999999998654 455555443

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.66  E-value=1.1e-15  Score=112.38  Aligned_cols=102  Identities=24%  Similarity=0.356  Sum_probs=80.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +|++||||++++||.+++++|++.|++|++++|+..   ......+.+....  ....+.++.+|+++.+++..+++++.
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~---~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~   76 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSE---KAANVAQEINAEY--GEGMAYGFGADATSEQSVLALSRGVD   76 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHHHHhc--CCceeEEEEccCCCHHHHHHHHHHHH
Confidence            678999999999999999999999999999998733   3333333333210  12357889999999999999999999


Q ss_pred             HhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          120 NAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +.++++|++|||+|.... .++.+.+.+
T Consensus        77 ~~~~~id~vv~~ag~~~~-~~~~~~~~~  103 (259)
T PRK12384         77 EIFGRVDLLVYNAGIAKA-AFITDFQLG  103 (259)
T ss_pred             HHcCCCCEEEECCCcCCC-CCcccCCHH
Confidence            999999999999998765 455555443

>PRK09186 flagellin modification protein A; Provisional

Probab=99.66  E-value=1.1e-15  Score=112.06  Aligned_cols=93  Identities=25%  Similarity=0.331  Sum_probs=74.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|+++|||++++||+++|+.|++.|++|++++|+.   +.+.+..+++....  ....+.++.+|++|++++.+++++
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~---~~~~~~~~~l~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~   76 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDK---EALNELLESLGKEF--KSKKLSLVELDITDQESLEEFLSK   76 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCh---HHHHHHHHHHHhhc--CCCceeEEEecCCCHHHHHHHHHH
Confidence            4688999999999999999999999999999998873   33333444443210  123455678999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCC
Q 044851          118 VVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~  135 (149)
                      +.+.++++|+||||||..
T Consensus        77 ~~~~~~~id~vi~~A~~~   94 (256)
T PRK09186         77 SAEKYGKIDGAVNCAYPR   94 (256)
T ss_pred             HHHHcCCccEEEECCccc
Confidence            999999999999999764

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.7e-15  Score=110.63  Aligned_cols=102  Identities=26%  Similarity=0.435  Sum_probs=79.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      ++++||||++++||..++++|++.|++|+++.++.  ..........+..    .+..+.++.+|+++.+++..++.++.
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~l~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~   75 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRN--RDAAEAVVQAIRR----QGGEALAVAADVADEADVLRLFEAVD   75 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCC--HHHHHHHHHHHHh----CCCcEEEEEeccCCHHHHHHHHHHHH
Confidence            46899999999999999999999999988877542  2333334444443    34457789999999999999999999


Q ss_pred             HhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          120 NAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +.++++|+||||+|......++.+.+.+
T Consensus        76 ~~~~~id~li~~ag~~~~~~~~~~~~~~  103 (248)
T PRK06123         76 RELGRLDALVNNAGILEAQMRLEQMDAA  103 (248)
T ss_pred             HHhCCCCEEEECCCCCCCCCChhhCCHH
Confidence            9999999999999986543345554433

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.66  E-value=2e-15  Score=110.40  Aligned_cols=93  Identities=32%  Similarity=0.485  Sum_probs=76.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||++++||.+++++|++.|++|++++|+..   ......+++..    ....+.++.+|+++.+++..++.
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~---~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~   75 (250)
T PRK07774          3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAE---GAERVAKQIVA----DGGTAIAVQVDVSDPDSAKAMAD   75 (250)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHHH
Confidence            367899999999999999999999999999999998632   23333333433    23456788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~  136 (149)
                      ++.+.++++|+||||+|+..
T Consensus        76 ~~~~~~~~id~vi~~ag~~~   95 (250)
T PRK07774         76 ATVSAFGGIDYLVNNAAIYG   95 (250)
T ss_pred             HHHHHhCCCCEEEECCCCcC
Confidence            99999999999999999854

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.66  E-value=7.1e-16  Score=116.53  Aligned_cols=112  Identities=21%  Similarity=0.229  Sum_probs=78.0

Q ss_pred             CCCCCEEEEecC--CChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHH-----HHhccC-CCCCCceEEEecC--C
Q 044851           37 KLRGMVALVTGG--DSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEM-----LREAKT-PDAKDPMAISADL--G  106 (149)
Q Consensus        37 ~~~~~~~litG~--s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~Dv--~  106 (149)
                      .++||++||||+  ++|||+++|+.|++.|++|++ +|+....+.....+..     ...... .......++.+|+  +
T Consensus         6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   84 (303)
T PLN02730          6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFD   84 (303)
T ss_pred             CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecC
Confidence            388999999999  899999999999999999988 6653333333222211     000000 0011246788898  4


Q ss_pred             Ch------------------HHHHHHHHHHHHhcCCccEEEeCCcCCCC-CCCCCCCCCCCC
Q 044851          107 FD------------------ENCKRVVDEVVNAYDRIDILVNNAAEQYE-CGSVEDIDESRL  149 (149)
Q Consensus       107 ~~------------------~~v~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~s~~~~  149 (149)
                      +.                  ++++.+++++.+.+|++|+||||||+... ..++.+++.++|
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~  146 (303)
T PLN02730         85 TPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGY  146 (303)
T ss_pred             ccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHH
Confidence            33                  48999999999999999999999986432 257777776654

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.7e-15  Score=112.31  Aligned_cols=98  Identities=29%  Similarity=0.430  Sum_probs=80.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      ++++|||+++|||++++++|++.|++|++++|+   .+.+.+...++..    .+..+.++.+|+++.+++.++++.+.+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~---~~~~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~~~~i~~   73 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVN---EEGGEETLKLLRE----AGGDGFYQRCDVRDYSQLTALAQACEE   73 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHh----cCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            469999999999999999999999999999986   3344455555544    455678899999999999999999999


Q ss_pred             hcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          121 AYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       121 ~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      .++++|+||||+|.... ..+.+.+.
T Consensus        74 ~~~~id~lI~~ag~~~~-~~~~~~~~   98 (270)
T PRK05650         74 KWGGIDVIVNNAGVASG-GFFEELSL   98 (270)
T ss_pred             HcCCCCEEEECCCCCCC-CCcccCCH
Confidence            99999999999998765 45555443

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.66  E-value=1.2e-15  Score=111.44  Aligned_cols=101  Identities=34%  Similarity=0.519  Sum_probs=80.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++++++|||++++||.+++++|++.|++|++++|+..   ........+.     .+..+.++.+|+++.++++.++++
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~---~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~   74 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEE---AAERVAAEIL-----AGGRAIAVAADVSDEADVEAAVAA   74 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHh-----cCCeEEEEECCCCCHHHHHHHHHH
Confidence            57889999999999999999999999999999999743   2333333332     134577899999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      +.+.++++|+||||+|......++.+.+.
T Consensus        75 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~  103 (251)
T PRK07231         75 ALERFGSVDILVNNAGTTHRNGPLLDVDE  103 (251)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCChhhCCH
Confidence            99999999999999998654344544443

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.65  E-value=2.2e-15  Score=110.51  Aligned_cols=104  Identities=33%  Similarity=0.477  Sum_probs=78.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|+++|||+++|||.+++++|++.|++|++..++  ..+...+...++..    .+..+..+.+|+++.+++..++++
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~   75 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGN--RKEEAEETVYEIQS----NGGSAFSIGANLESLHGVEALYSS   75 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCC--CHHHHHHHHHHHHh----cCCceEEEecccCCHHHHHHHHHH
Confidence            468899999999999999999999999999887543  13334444444443    345567888999999999999988


Q ss_pred             HHHh----cC--CccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          118 VVNA----YD--RIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       118 ~~~~----~g--~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +.+.    ++  ++|+||||||+... .++.+.+.++
T Consensus        76 ~~~~~~~~~g~~~id~lv~~Ag~~~~-~~~~~~~~~~  111 (252)
T PRK12747         76 LDNELQNRTGSTKFDILINNAGIGPG-AFIEETTEQF  111 (252)
T ss_pred             HHHHhhhhcCCCCCCEEEECCCcCCC-CCcccCCHHH
Confidence            7653    34  89999999998643 4566655443

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.65  E-value=2e-15  Score=110.16  Aligned_cols=100  Identities=33%  Similarity=0.439  Sum_probs=79.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+|+++|||++++||.+++++|++.|++|++++|+.   +.+.+..++       .+.++.++.+|+++.+++..+++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~---~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~   72 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDP---ASLEAARAE-------LGESALVIRADAGDVAAQKALAQ   72 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCH---HHHHHHHHH-------hCCceEEEEecCCCHHHHHHHHH
Confidence            35688999999999999999999999999999998862   223222222       23456788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      .+.+.++++|++|||+|.... .++.+.+.+
T Consensus        73 ~~~~~~~~id~vi~~ag~~~~-~~~~~~~~~  102 (249)
T PRK06500         73 ALAEAFGRLDAVFINAGVAKF-APLEDWDEA  102 (249)
T ss_pred             HHHHHhCCCCEEEECCCCCCC-CChhhCCHH
Confidence            999999999999999998654 455554433

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.65  E-value=2.8e-16  Score=110.63  Aligned_cols=102  Identities=17%  Similarity=0.280  Sum_probs=74.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      +|||||+.+|||..++++|+++|+. |++++|+.....+..+.++++..    .+.++.++.||++|++++.++++++.+
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~----~g~~v~~~~~Dv~d~~~v~~~~~~~~~   77 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELES----AGARVEYVQCDVTDPEAVAAALAQLRQ   77 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHH----TT-EEEEEE--TTSHHHHHHHHHTSHT
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHh----CCCceeeeccCccCHHHHHHHHHHHHh
Confidence            6999999999999999999999864 89999984334455567777877    677899999999999999999999999


Q ss_pred             hcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          121 AYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       121 ~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      .+++|++|||++|.... ..+.+.+.++
T Consensus        78 ~~~~i~gVih~ag~~~~-~~~~~~t~~~  104 (181)
T PF08659_consen   78 RFGPIDGVIHAAGVLAD-APIQDQTPDE  104 (181)
T ss_dssp             TSS-EEEEEE--------B-GCC--HHH
T ss_pred             ccCCcceeeeeeeeecc-cccccCCHHH
Confidence            99999999999999775 5777766543

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK06182 short chain dehydrogenase; Validated

Probab=99.65  E-value=1.4e-15  Score=112.96  Aligned_cols=95  Identities=34%  Similarity=0.407  Sum_probs=77.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      ++|+++|||+++|||.++++.|++.|++|++++|+.   ..+.    ++..      ..+.++.+|+++.++++.+++++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~---~~l~----~~~~------~~~~~~~~Dv~~~~~~~~~~~~~   68 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRV---DKME----DLAS------LGVHPLSLDVTDEASIKAAVDTI   68 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH---HHHH----HHHh------CCCeEEEeeCCCHHHHHHHHHHH
Confidence            568999999999999999999999999999999863   2222    2221      23678899999999999999999


Q ss_pred             HHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          119 VNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      .+.++++|+||||+|+... +++.+.+.+
T Consensus        69 ~~~~~~id~li~~ag~~~~-~~~~~~~~~   96 (273)
T PRK06182         69 IAEEGRIDVLVNNAGYGSY-GAIEDVPID   96 (273)
T ss_pred             HHhcCCCCEEEECCCcCCC-CchhhCCHH
Confidence            9999999999999998754 566665543

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.65  E-value=2.4e-15  Score=109.89  Aligned_cols=101  Identities=30%  Similarity=0.445  Sum_probs=78.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      .|+++|||+++|||..+++.|++.|++|+++.++.  .+.+......+..    .+.++.++.||+++.+++..+++++.
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~   75 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARD--AAAAEETADAVRA----AGGRACVVAGDVANEADVIAMFDAVQ   75 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHHHHh----cCCcEEEEEeccCCHHHHHHHHHHHH
Confidence            36899999999999999999999999988776542  2333344444443    34567889999999999999999999


Q ss_pred             HhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          120 NAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      +.++++|+||||+|......++.+.+.
T Consensus        76 ~~~~~id~li~~ag~~~~~~~~~~~~~  102 (248)
T PRK06947         76 SAFGRLDALVNNAGIVAPSMPLADMDA  102 (248)
T ss_pred             HhcCCCCEEEECCccCCCCCChhhCCH
Confidence            889999999999998654334555443

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.65  E-value=1.5e-15  Score=111.76  Aligned_cols=94  Identities=30%  Similarity=0.410  Sum_probs=76.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||.+++++|++.|++|++++|+...      .          ....+.++.+|+++.++++.+++
T Consensus         6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~------~----------~~~~~~~~~~D~~~~~~~~~~~~   69 (260)
T PRK06523          6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPD------D----------LPEGVEFVAADLTTAEGCAAVAR   69 (260)
T ss_pred             CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhh------h----------cCCceeEEecCCCCHHHHHHHHH
Confidence            5789999999999999999999999999999999986321      0          12346789999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCC-CCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE-CGSVEDIDE  146 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~-~~~~~~~s~  146 (149)
                      ++.+.++++|+||||||.... ...+.+.+.
T Consensus        70 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~  100 (260)
T PRK06523         70 AVLERLGGVDILVHVLGGSSAPAGGFAALTD  100 (260)
T ss_pred             HHHHHcCCCCEEEECCcccccCCCCcccCCH
Confidence            999999999999999997532 234444443

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.65  E-value=3e-15  Score=109.25  Aligned_cols=101  Identities=34%  Similarity=0.419  Sum_probs=81.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|+++|||++++||.+++++|+++|++|++++|+.   .......+.+..    .+.++.++.+|+++.++++.++++
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~---~~~~~~~~~l~~----~~~~~~~~~~Dl~~~~~~~~~~~~   76 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICG---DDAAATAELVEA----AGGKARARQVDVRDRAALKAAVAA   76 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHh----cCCeEEEEECCCCCHHHHHHHHHH
Confidence            5678999999999999999999999999999999973   333344444443    344578899999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      +.+.++++|++|||+|.... .++.+.+.
T Consensus        77 ~~~~~~~~d~vi~~ag~~~~-~~~~~~~~  104 (251)
T PRK12826         77 GVEDFGRLDILVANAGIFPL-TPFAEMDD  104 (251)
T ss_pred             HHHHhCCCCEEEECCCCCCC-CChhhCCH
Confidence            99999999999999998765 44544443

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.65  E-value=2.8e-15  Score=110.28  Aligned_cols=105  Identities=31%  Similarity=0.397  Sum_probs=80.3

Q ss_pred             CCCCCEEEEecCCC--hHHHHHHHHHHHcCCcEEEEecCCCC--------hHHHHHHHHHHHhccCCCCCCceEEEecCC
Q 044851           37 KLRGMVALVTGGDS--GIGRAVCHCFAQEGATVAFTYVKPQE--------DKDAKETLEMLREAKTPDAKDPMAISADLG  106 (149)
Q Consensus        37 ~~~~~~~litG~s~--gig~~~a~~L~~~g~~Vi~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~  106 (149)
                      .+++|++||||+++  |||..++++|++.|++|++++|++..        .........++..    .+.++.++.+|++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~   77 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES----YGVRCEHMEIDLS   77 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHh----cCCeEEEEECCCC
Confidence            35788999999984  89999999999999999999887221        1111112233332    3456788999999


Q ss_pred             ChHHHHHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          107 FDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       107 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      +.+++..+++++.+.++++|+||||+|+... .++.+.+.
T Consensus        78 ~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~-~~~~~~~~  116 (256)
T PRK12748         78 QPYAPNRVFYAVSERLGDPSILINNAAYSTH-TRLEELTA  116 (256)
T ss_pred             CHHHHHHHHHHHHHhCCCCCEEEECCCcCCC-CChhhCCH
Confidence            9999999999999999999999999998654 45555443

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.65  E-value=2.9e-15  Score=109.41  Aligned_cols=100  Identities=31%  Similarity=0.463  Sum_probs=80.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      ++++++||||++++||.+++++|++.|++|++++|+.   ....+...++..    .+.++.++.+|+++.+++++++..
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~---~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~   73 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNR---EAAEKVAADIRA----KGGNAQAFACDITDRDSVDTAVAA   73 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCH---HHHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999999873   333334444443    345678899999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      +.+.++++|++|||+|.... .++.+.+
T Consensus        74 ~~~~~~~~d~vi~~ag~~~~-~~~~~~~  100 (250)
T TIGR03206        74 AEQALGPVDVLVNNAGWDKF-GPFTKTE  100 (250)
T ss_pred             HHHHcCCCCEEEECCCCCCC-CChhhCC
Confidence            99999999999999998643 4444433

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.64  E-value=1.9e-15  Score=110.91  Aligned_cols=99  Identities=35%  Similarity=0.500  Sum_probs=78.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +.+++|+++|||++++||.+++++|+++|++|++++|+..    .......+      ....+.++.+|+++.++++.++
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~----~~~~~~~~------~~~~~~~~~~Dl~~~~~~~~~~   80 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSED----VAEVAAQL------LGGNAKGLVCDVSDSQSVEAAV   80 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHh------hCCceEEEEecCCCHHHHHHHH
Confidence            3578899999999999999999999999999999998632    11222222      1234568899999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      +++.+.++++|++|||+|.... .++.+.+
T Consensus        81 ~~~~~~~~~~d~vi~~ag~~~~-~~~~~~~  109 (255)
T PRK06841         81 AAVISAFGRIDILVNSAGVALL-APAEDVS  109 (255)
T ss_pred             HHHHHHhCCCCEEEECCCCCCC-CChhhCC
Confidence            9999999999999999998654 4444443

>PRK06196 oxidoreductase; Provisional

Probab=99.64  E-value=3.7e-15  Score=112.97  Aligned_cols=90  Identities=33%  Similarity=0.452  Sum_probs=75.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|+++|||+++|||.+++++|++.|++|++++|+.   +...+..+++.        .+.++.+|++|.+++++++
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~---~~~~~~~~~l~--------~v~~~~~Dl~d~~~v~~~~   90 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRP---DVAREALAGID--------GVEVVMLDLADLESVRAFA   90 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHhh--------hCeEEEccCCCHHHHHHHH
Confidence            346789999999999999999999999999999999873   23333333221        2678899999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~  136 (149)
                      +++.+.++++|+||||||+..
T Consensus        91 ~~~~~~~~~iD~li~nAg~~~  111 (315)
T PRK06196         91 ERFLDSGRRIDILINNAGVMA  111 (315)
T ss_pred             HHHHhcCCCCCEEEECCCCCC
Confidence            999998999999999999854

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.64  E-value=3.6e-15  Score=110.05  Aligned_cols=99  Identities=24%  Similarity=0.304  Sum_probs=79.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++++++||||+++||.+++++|+++|++|++++|+.   ..+.+...++ .    ...++.++.+|+++.+++..+++.
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~-~----~~~~~~~~~~D~~d~~~~~~~~~~   74 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNA---EKLEALAARL-P----YPGRHRWVVADLTSEAGREAVLAR   74 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHH-h----cCCceEEEEccCCCHHHHHHHHHH
Confidence            5688999999999999999999999999999999873   3333444444 2    345678899999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      +.+ ++++|+||||+|.... .++.+.+.
T Consensus        75 ~~~-~~~id~lv~~ag~~~~-~~~~~~~~  101 (263)
T PRK09072         75 ARE-MGGINVLINNAGVNHF-ALLEDQDP  101 (263)
T ss_pred             HHh-cCCCCEEEECCCCCCc-cccccCCH
Confidence            876 7899999999998654 45555443

>PLN00015 protochlorophyllide reductase

Probab=99.64  E-value=1.7e-15  Score=114.60  Aligned_cols=97  Identities=21%  Similarity=0.250  Sum_probs=76.3

Q ss_pred             EEecCCChHHHHHHHHHHHcC-CcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHhc
Q 044851           44 LVTGGDSGIGRAVCHCFAQEG-ATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAY  122 (149)
Q Consensus        44 litG~s~gig~~~a~~L~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  122 (149)
                      ||||+++|||+++++.|+++| ++|++++|+   .+.+.+...++..    .+..+.++.+|+++.++++.+++++.+.+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~---~~~~~~~~~~l~~----~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   73 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRD---FLKAERAAKSAGM----PKDSYTVMHLDLASLDSVRQFVDNFRRSG   73 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCC---HHHHHHHHHHhcC----CCCeEEEEEecCCCHHHHHHHHHHHHhcC
Confidence            699999999999999999999 999999886   3334444444432    23457788999999999999999999888


Q ss_pred             CCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          123 DRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       123 g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +++|+||||||+.....++.+.+.+
T Consensus        74 ~~iD~lInnAG~~~~~~~~~~~~~~   98 (308)
T PLN00015         74 RPLDVLVCNAAVYLPTAKEPTFTAD   98 (308)
T ss_pred             CCCCEEEECCCcCCCCCCcCCCCHH
Confidence            8999999999986442345555544

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.64  E-value=4.3e-15  Score=110.30  Aligned_cols=103  Identities=26%  Similarity=0.331  Sum_probs=80.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|++||||++++||.+++++|+++|++|++++|+.   +......+.+... . ...++.++.+|+++++++..++++
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~---~~~~~~~~~l~~~-~-~~~~~~~~~~Dl~~~~~~~~~~~~   79 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNP---DKLAAAAEEIEAL-K-GAGAVRYEPADVTDEDQVARAVDA   79 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCH---HHHHHHHHHHHhc-c-CCCceEEEEcCCCCHHHHHHHHHH
Confidence            6789999999999999999999999999999999863   2333333333321 0 134677889999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      +.+.++++|++|||+|......++.+.+
T Consensus        80 ~~~~~~~~d~li~~ag~~~~~~~~~~~~  107 (276)
T PRK05875         80 ATAWHGRLHGVVHCAGGSETIGPITQID  107 (276)
T ss_pred             HHHHcCCCCEEEECCCcccCCCChhhCC
Confidence            9999999999999999754323444444

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.64  E-value=1.7e-15  Score=112.18  Aligned_cols=92  Identities=36%  Similarity=0.432  Sum_probs=76.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      ++++++||||+++||.+++++|+++|++|++++|+.....               ....+.++.+|++|.++++.+++.+
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~---------------~~~~~~~~~~D~~d~~~~~~~~~~~   67 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA---------------PIPGVELLELDVTDDASVQAAVDEV   67 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---------------ccCCCeeEEeecCCHHHHHHHHHHH
Confidence            4678999999999999999999999999999998732110               1234678999999999999999999


Q ss_pred             HHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          119 VNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      .+.++++|+||||+|+... ..+.+.+.
T Consensus        68 ~~~~g~~d~li~~ag~~~~-~~~~~~~~   94 (270)
T PRK06179         68 IARAGRIDVLVNNAGVGLA-GAAEESSI   94 (270)
T ss_pred             HHhCCCCCEEEECCCCCCC-cCcccCCH
Confidence            9999999999999998654 55555443

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.64  E-value=5.3e-15  Score=107.79  Aligned_cols=104  Identities=25%  Similarity=0.422  Sum_probs=81.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChH-HHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDK-DAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +++++++|||++++||+++++.|+++|++|+++.+...... ...+...++..    .+.++.++.+|+++.++++.+++
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~   79 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEA----AGGKALGLAFDVRDFAATRAALD   79 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHH
Confidence            56789999999999999999999999999998876533222 23333333433    34567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      ++.+.++++|++|||+|.... ..+.+.+.
T Consensus        80 ~~~~~~~~~d~vi~~ag~~~~-~~~~~~~~  108 (249)
T PRK12827         80 AGVEEFGRLDILVNNAGIATD-AAFAELSI  108 (249)
T ss_pred             HHHHHhCCCCEEEECCCCCCC-CCcccCCH
Confidence            999988999999999998764 45555443

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.64  E-value=2e-15  Score=112.46  Aligned_cols=97  Identities=26%  Similarity=0.273  Sum_probs=77.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .+++++|||+++|||.+++++|++.|++|++++|+..   .+...    ...   .+.++.++.+|+++.+++..+++.+
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~---~~~~l----~~~---~~~~~~~~~~D~~d~~~~~~~~~~~   72 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEA---ARADF----EAL---HPDRALARLLDVTDFDAIDAVVADA   72 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHH---HHHHH----Hhh---cCCCeeEEEccCCCHHHHHHHHHHH
Confidence            4678999999999999999999999999999999732   22221    110   2345678899999999999999999


Q ss_pred             HHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          119 VNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      .+.++++|+||||+|.... .++.+.+.
T Consensus        73 ~~~~~~~d~vv~~ag~~~~-~~~~~~~~   99 (277)
T PRK06180         73 EATFGPIDVLVNNAGYGHE-GAIEESPL   99 (277)
T ss_pred             HHHhCCCCEEEECCCccCC-cccccCCH
Confidence            9999999999999998654 45555543

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.64  E-value=2.2e-15  Score=111.02  Aligned_cols=96  Identities=28%  Similarity=0.308  Sum_probs=76.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      |++|||||+++||.+++++|++.|++|++++|+..   .+.+....+      .+..+.++.+|+++.+++.+++..+.+
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~---~~~~~~~~~------~~~~~~~~~~D~~~~~~v~~~~~~~~~   72 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEA---GLAALAAEL------GAGNAWTGALDVTDRAAWDAALADFAA   72 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHH---HHHHHHHHh------cCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            57999999999999999999999999999998632   222222221      134678899999999999999999877


Q ss_pred             h-cCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          121 A-YDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       121 ~-~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      . ++++|+||||||.... ..+.+.+.
T Consensus        73 ~~~~~id~vi~~ag~~~~-~~~~~~~~   98 (260)
T PRK08267         73 ATGGRLDVLFNNAGILRG-GPFEDIPL   98 (260)
T ss_pred             HcCCCCCEEEECCCCCCC-CccccCCH
Confidence            6 7899999999998765 45555443

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.64  E-value=2.3e-15  Score=109.42  Aligned_cols=94  Identities=21%  Similarity=0.295  Sum_probs=74.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +|++||||+++|||.+++++|++.|++|++++|+...   .   .+.+..    .+  +.++.+|+++.+++..+++++.
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~---~~~~~~----~~--~~~~~~D~~~~~~~~~~~~~~~   69 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP---A---IDGLRQ----AG--AQCIQADFSTNAGIMAFIDELK   69 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchh---H---HHHHHH----cC--CEEEEcCCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999999987421   1   222222    22  5678999999999999999999


Q ss_pred             HhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          120 NAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      +.++++|++|||+|.... ....+.+.
T Consensus        70 ~~~~~id~lv~~ag~~~~-~~~~~~~~   95 (236)
T PRK06483         70 QHTDGLRAIIHNASDWLA-EKPGAPLA   95 (236)
T ss_pred             hhCCCccEEEECCccccC-CCcCccCH
Confidence            999999999999998544 33344433

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.64  E-value=4.4e-15  Score=109.22  Aligned_cols=101  Identities=34%  Similarity=0.530  Sum_probs=80.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      .+++|+++|||++++||..++++|++.|++ |++++|+..   ......+++..    .+..+.++.+|+++++++.+++
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~---~~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~~   75 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAE---KGEAQAAELEA----LGAKAVFVQADLSDVEDCRRVV   75 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHH---HHHHHHHHHHh----cCCeEEEEEccCCCHHHHHHHH
Confidence            468899999999999999999999999999 999998632   23333344433    3456778899999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      +.+.+.++++|++|||+|.... ..+.+.+
T Consensus        76 ~~~~~~~g~id~li~~ag~~~~-~~~~~~~  104 (260)
T PRK06198         76 AAADEAFGRLDALVNAAGLTDR-GTILDTS  104 (260)
T ss_pred             HHHHHHhCCCCEEEECCCcCCC-CChhhCC
Confidence            9999999999999999998654 4444443

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.63  E-value=2.3e-15  Score=111.99  Aligned_cols=100  Identities=27%  Similarity=0.326  Sum_probs=77.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      ++|++|||||+++||.+++++|+++|++|++++|+..   ......+.+... . ....+.++.+|++++++++. ++++
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~-~-~~~~~~~~~~D~~d~~~~~~-~~~~   75 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPE---KQENLLSQATQL-N-LQQNIKVQQLDVTDQNSIHN-FQLV   75 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHH---HHHHHHHHHHhc-C-CCCceeEEecCCCCHHHHHH-HHHH
Confidence            5688999999999999999999999999999998743   222333323221 0 13467888999999999999 9999


Q ss_pred             HHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          119 VNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      .+.++++|++|||+|.... ..+.+.+
T Consensus        76 ~~~~~~id~vv~~ag~~~~-~~~~~~~  101 (280)
T PRK06914         76 LKEIGRIDLLVNNAGYANG-GFVEEIP  101 (280)
T ss_pred             HHhcCCeeEEEECCccccc-CccccCC
Confidence            8999999999999998664 4444443

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.63  E-value=5.5e-15  Score=108.38  Aligned_cols=91  Identities=31%  Similarity=0.376  Sum_probs=75.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      .|+++|||++++||.+++++|++.|++|++++|+..  ....+..+.+..    .+.++.++.+|+++.+++.++++++.
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~--~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDD--EELAATQQELRA----LGVEVIFFPADVADLSAHEAMLDAAQ   75 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCch--hHHHHHHHHHHh----cCCceEEEEecCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999988632  223333343433    34567889999999999999999999


Q ss_pred             HhcCCccEEEeCCcCCC
Q 044851          120 NAYDRIDILVNNAAEQY  136 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~  136 (149)
                      +.++++|++|||+|...
T Consensus        76 ~~~~~id~vi~~ag~~~   92 (256)
T PRK12745         76 AAWGRIDCLVNNAGVGV   92 (256)
T ss_pred             HhcCCCCEEEECCccCC
Confidence            99999999999999854

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.63  E-value=2.7e-15  Score=111.54  Aligned_cols=98  Identities=26%  Similarity=0.327  Sum_probs=78.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .+|+++|||++++||+.++++|+++|+.|++++|+.   ..+.+..+.       ....+.++.+|+++.+++..+++++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~---~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~   71 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDT---ATLADLAEK-------YGDRLLPLALDVTDRAAVFAAVETA   71 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHh-------ccCCeeEEEccCCCHHHHHHHHHHH
Confidence            467899999999999999999999999999999863   222222211       2345678899999999999999999


Q ss_pred             HHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          119 VNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      .+.++++|++|||+|.... +++.+.+.+
T Consensus        72 ~~~~~~~d~vi~~ag~~~~-~~~~~~~~~   99 (275)
T PRK08263         72 VEHFGRLDIVVNNAGYGLF-GMIEEVTES   99 (275)
T ss_pred             HHHcCCCCEEEECCCCccc-cccccCCHH
Confidence            9999999999999998765 566655543

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.63  E-value=7.6e-15  Score=107.32  Aligned_cols=101  Identities=32%  Similarity=0.521  Sum_probs=79.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .++++++||||++++||.+++++|+++|++|++..++.  ..........+..    .+....++.+|+++.+++..+++
T Consensus         3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   76 (252)
T PRK06077          3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKR--AEEMNETLKMVKE----NGGEGIGVLADVSTREGCETLAK   76 (252)
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCC--hHHHHHHHHHHHH----cCCeeEEEEeccCCHHHHHHHHH
Confidence            35678999999999999999999999999988776642  2333444444443    34456788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDI  144 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~  144 (149)
                      ++.+.++++|+||||+|.... .++.+.
T Consensus        77 ~~~~~~~~~d~vi~~ag~~~~-~~~~~~  103 (252)
T PRK06077         77 ATIDRYGVADILVNNAGLGLF-SPFLNV  103 (252)
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CChhhC
Confidence            999999999999999998654 444443

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.62  E-value=7.9e-15  Score=107.53  Aligned_cols=100  Identities=38%  Similarity=0.557  Sum_probs=77.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEE-ecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFT-YVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +++++++|||++++||.+++++|+++|+.|+++ .|+   ...+.+..+.+..    .+..+.++.+|++|.+++..+++
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~---~~~~~~~~~~~~~----~~~~~~~~~~D~~d~~~i~~~~~   76 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRN---KQAADETIREIES----NGGKAFLIEADLNSIDGVKKLVE   76 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHHHh----cCCcEEEEEcCcCCHHHHHHHHH
Confidence            567899999999999999999999999998775 454   2333344444433    34567789999999999999999


Q ss_pred             HHHHhc------CCccEEEeCCcCCCCCCCCCCCC
Q 044851          117 EVVNAY------DRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       117 ~~~~~~------g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      ++.+.+      +++|++|||+|.... ..+.+.+
T Consensus        77 ~~~~~~~~~~~~~~id~vi~~ag~~~~-~~~~~~~  110 (254)
T PRK12746         77 QLKNELQIRVGTSEIDILVNNAGIGTQ-GTIENTT  110 (254)
T ss_pred             HHHHHhccccCCCCccEEEECCCCCCC-CChhhCC
Confidence            998876      479999999998654 4555444

>PRK06484 short chain dehydrogenase; Validated

Probab=99.62  E-value=4.9e-15  Score=119.03  Aligned_cols=101  Identities=29%  Similarity=0.414  Sum_probs=80.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .++|+++|||+++|||.++|++|+++|++|++++|+.   ..+.+..++       .+.++.++.+|+++++++++++++
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~---~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~   72 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNV---ERARERADS-------LGPDHHALAMDVSDEAQIREGFEQ   72 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHH-------hCCceeEEEeccCCHHHHHHHHHH
Confidence            4689999999999999999999999999999999863   333333322       234567789999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCC-CCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYE-CGSVEDIDESR  148 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~-~~~~~~~s~~~  148 (149)
                      +.+.++++|+||||||+..+ ..++.+.+.++
T Consensus        73 ~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~  104 (520)
T PRK06484         73 LHREFGRIDVLVNNAGVTDPTMTATLDTTLEE  104 (520)
T ss_pred             HHHHhCCCCEEEECCCcCCCCCcccccCCHHH
Confidence            99999999999999998432 23455555443

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.62  E-value=9.7e-15  Score=108.60  Aligned_cols=100  Identities=28%  Similarity=0.417  Sum_probs=79.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +..|+++|||++++||.+++++|+++|++|++++|+.   ..+.+....+..    .+.++.++.+|+++.+++.+++++
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~---~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~   80 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRV---EKCEELVDKIRA----DGGEAVAFPLDVTDPDSVKSFVAQ   80 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHh----cCCeEEEEECCCCCHHHHHHHHHH
Confidence            5668999999999999999999999999999988863   233333333333    344677889999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      +.+.++++|++|||+|.... ..+.+.+
T Consensus        81 ~~~~~~~id~vi~~Ag~~~~-~~~~~~~  107 (274)
T PRK07775         81 AEEALGEIEVLVSGAGDTYF-GKLHEIS  107 (274)
T ss_pred             HHHhcCCCCEEEECCCcCCC-cccccCC
Confidence            99989999999999998654 3444433

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.62  E-value=7.6e-15  Score=108.96  Aligned_cols=100  Identities=23%  Similarity=0.286  Sum_probs=77.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      |+++||||++|||.++++.|++.|++|++++|+.   +.+.+..+++...   ......++.+|+++.+++..+++++.+
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~---~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~   74 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDA---DGLAQTVADARAL---GGTVPEHRALDISDYDAVAAFAADIHA   74 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHhc---CCCcceEEEeeCCCHHHHHHHHHHHHH
Confidence            4799999999999999999999999999998863   3344444444331   222345678999999999999999999


Q ss_pred             hcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          121 AYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       121 ~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      .++++|+||||+|.... ..+.+.+.+
T Consensus        75 ~~~~id~lv~~ag~~~~-~~~~~~~~~  100 (272)
T PRK07832         75 AHGSMDVVMNIAGISAW-GTVDRLTHE  100 (272)
T ss_pred             hcCCCCEEEECCCCCCC-CccccCCHH
Confidence            99999999999998654 455555443

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.62  E-value=7.7e-15  Score=108.07  Aligned_cols=101  Identities=32%  Similarity=0.442  Sum_probs=78.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||+++|||.+++++|++.|++|++++|+.   +.+....+++...   .+.++.++.+|+++.+++..+++
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~   77 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDA---DALEALAADLRAA---HGVDVAVHALDLSSPEAREQLAA   77 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHHHhh---cCCceEEEEecCCCHHHHHHHHH
Confidence            36789999999999999999999999999999999873   3344444444331   24467788999999999888776


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      .    ++++|++|||+|.... .++.+.+.++
T Consensus        78 ~----~g~id~lv~~ag~~~~-~~~~~~~~~~  104 (259)
T PRK06125         78 E----AGDIDILVNNAGAIPG-GGLDDVDDAA  104 (259)
T ss_pred             H----hCCCCEEEECCCCCCC-CCcccCCHHH
Confidence            4    4789999999998654 5677766554

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.62  E-value=6.7e-15  Score=107.12  Aligned_cols=100  Identities=27%  Similarity=0.359  Sum_probs=78.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      |+++|||++++||.++|++|++.|++|++++|+..  +...+.......    .+.++.++.+|+++.+++..+++++.+
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~--~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~~~   76 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGN--DCAKDWFEEYGF----TEDQVRLKELDVTDTEECAEALAEIEE   76 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhhc----cCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            57999999999999999999999999999998742  223333332222    344678899999999999999999999


Q ss_pred             hcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          121 AYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       121 ~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      .++++|++|||+|.... ..+.+.+.+
T Consensus        77 ~~~~id~vi~~ag~~~~-~~~~~~~~~  102 (245)
T PRK12824         77 EEGPVDILVNNAGITRD-SVFKRMSHQ  102 (245)
T ss_pred             HcCCCCEEEECCCCCCC-CccccCCHH
Confidence            99999999999998654 455554433

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.62  E-value=8.9e-15  Score=106.27  Aligned_cols=98  Identities=32%  Similarity=0.440  Sum_probs=77.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      |++||||++++||..++++|++.|++|+++.|+  ......+...++..    .+.++.++.+|+++++++.++++++.+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~--~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~   74 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGP--NEERAEAWLQEQGA----LGFDFRVVEGDVSSFESCKAAVAKVEA   74 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC--CHHHHHHHHHHHHh----hCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999988873  12333333333332    345678899999999999999999999


Q ss_pred             hcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          121 AYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       121 ~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      .++++|+||||+|.... ..+.+.+
T Consensus        75 ~~~~id~vi~~ag~~~~-~~~~~~~   98 (242)
T TIGR01829        75 ELGPIDVLVNNAGITRD-ATFKKMT   98 (242)
T ss_pred             HcCCCcEEEECCCCCCC-CChhhCC
Confidence            99999999999998654 3444443

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.62  E-value=1.4e-14  Score=107.27  Aligned_cols=98  Identities=27%  Similarity=0.383  Sum_probs=72.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHH----HHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENC----KRVVD  116 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v----~~~~~  116 (149)
                      ++++||||++|||++++++|++.|++|++++++.  ...+....+++...   .+.++.++.+|++|.+++    +.+++
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~--~~~~~~~~~~l~~~---~~~~~~~~~~Dv~d~~~~~~~~~~~~~   76 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRS--AAAASTLAAELNAR---RPNSAVTCQADLSNSATLFSRCEAIID   76 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCc--HHHHHHHHHHHHhc---cCCceEEEEccCCCchhhHHHHHHHHH
Confidence            5799999999999999999999999999887642  23344444444321   234566789999998855    56666


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDI  144 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~  144 (149)
                      .+.+.++++|+||||||+... .++.+.
T Consensus        77 ~~~~~~g~iD~lv~nAG~~~~-~~~~~~  103 (267)
T TIGR02685        77 ACFRAFGRCDVLVNNASAFYP-TPLLRG  103 (267)
T ss_pred             HHHHccCCceEEEECCccCCC-Cccccc
Confidence            666788999999999998654 444443

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.62  E-value=5.9e-15  Score=107.38  Aligned_cols=98  Identities=24%  Similarity=0.331  Sum_probs=77.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++++++|||++++||.+++++|+++|+.|++.+++.   +.+.+....       .+..+.++.+|+++.+++..+++
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~---~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~   72 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRV---EKLEALAAE-------LGERVKIFPANLSDRDEVKALGQ   72 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH---HHHHHHHHH-------hCCceEEEEccCCCHHHHHHHHH
Confidence            35788999999999999999999999999888887752   223222221       23356788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      ++.+.++++|+||||+|.... .++.+.+
T Consensus        73 ~~~~~~~~id~vi~~ag~~~~-~~~~~~~  100 (245)
T PRK12936         73 KAEADLEGVDILVNNAGITKD-GLFVRMS  100 (245)
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CccccCC
Confidence            999999999999999998654 4444443

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.61  E-value=1.4e-14  Score=106.01  Aligned_cols=104  Identities=28%  Similarity=0.419  Sum_probs=80.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCC--ChHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLG--FDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~--~~~~v~~~  114 (149)
                      .+++|+++|||++++||..++++|++.|++|++++|+.   ..+....+++...   ...++.++.+|+.  +.+++.++
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~---~~~~~~~~~l~~~---~~~~~~~~~~d~~~~~~~~~~~~   82 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTE---EKLEAVYDEIEAA---GGPQPAIIPLDLLTATPQNYQQL   82 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCH---HHHHHHHHHHHhc---CCCCceEEEecccCCCHHHHHHH
Confidence            46889999999999999999999999999999999973   3333444444431   2335667777876  78899999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      ++.+.+.++++|+||||||......++.+.+.
T Consensus        83 ~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~  114 (247)
T PRK08945         83 ADTIEEQFGRLDGVLHNAGLLGELGPMEQQDP  114 (247)
T ss_pred             HHHHHHHhCCCCEEEECCcccCCCCCcccCCH
Confidence            99999999999999999998655344544443

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.61  E-value=9.5e-15  Score=107.67  Aligned_cols=97  Identities=27%  Similarity=0.494  Sum_probs=78.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +++++|||++++||..++++|++.|++|++++|+.   .......+.+..    .+..+.++.+|+++.+++..+++++.
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~---~~~~~~~~~l~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~   73 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNE---TRLASLAQELAD----HGGEALVVPTDVSDAEACERLIEAAV   73 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            36799999999999999999999999999999873   333344444443    34567788999999999999999999


Q ss_pred             HhcCCccEEEeCCcCCCCCCCCCCC
Q 044851          120 NAYDRIDILVNNAAEQYECGSVEDI  144 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~~~~~~~~  144 (149)
                      +.++++|+||||+|.... +.+.+.
T Consensus        74 ~~~~~id~vi~~ag~~~~-~~~~~~   97 (263)
T PRK06181         74 ARFGGIDILVNNAGITMW-SRFDEL   97 (263)
T ss_pred             HHcCCCCEEEECCCcccc-cchhcc
Confidence            999999999999998654 445444

>PRK09135 pteridine reductase; Provisional

Probab=99.61  E-value=1.4e-14  Score=105.49  Aligned_cols=95  Identities=32%  Similarity=0.420  Sum_probs=75.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++++++|||++++||+.++++|++.|++|++++|+..  .........+...   ....+.++.+|+++.+++..++.+
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~--~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~   78 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSA--AEADALAAELNAL---RPGSAAALQADLLDPDALPELVAA   78 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH--HHHHHHHHHHHhh---cCCceEEEEcCCCCHHHHHHHHHH
Confidence            46689999999999999999999999999999998632  2222232333221   223567889999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~  137 (149)
                      +.+.++++|+||||+|....
T Consensus        79 ~~~~~~~~d~vi~~ag~~~~   98 (249)
T PRK09135         79 CVAAFGRLDALVNNASSFYP   98 (249)
T ss_pred             HHHHcCCCCEEEECCCCCCC
Confidence            99999999999999998654

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.61  E-value=1.2e-14  Score=105.95  Aligned_cols=98  Identities=31%  Similarity=0.467  Sum_probs=77.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEe-cCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTY-VKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      ++++|||++++||.+++++|++.|++|++.. |+   .+...+...++..    .+..+.++.+|++|.+++..+++++.
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~D~~d~~~i~~~~~~~~   74 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQN---LHAAQEVVNLITQ----AGGKAFVLQADISDENQVVAMFTAID   74 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCC---hHHHHHHHHHHHh----CCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            5799999999999999999999999987754 43   2334444444443    34557789999999999999999999


Q ss_pred             HhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          120 NAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      +.++++|+||||+|......++.+.+
T Consensus        75 ~~~~~id~vi~~ag~~~~~~~~~~~~  100 (247)
T PRK09730         75 QHDEPLAALVNNAGILFTQCTVENLT  100 (247)
T ss_pred             HhCCCCCEEEECCCCCCCCCccccCC
Confidence            99999999999999864434454444

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.61  E-value=6.8e-15  Score=121.72  Aligned_cols=105  Identities=30%  Similarity=0.393  Sum_probs=82.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+|++||||+++|||++++++|++.|++|++++|+.   ..+....+++....  ....+..+.+|+++.+++..+++
T Consensus       411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~---~~~~~~~~~l~~~~--~~~~~~~v~~Dvtd~~~v~~a~~  485 (676)
T TIGR02632       411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNL---EAAEAVAAEINGQF--GAGRAVALKMDVTDEQAVKAAFA  485 (676)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCH---HHHHHHHHHHHhhc--CCCcEEEEECCCCCHHHHHHHHH
Confidence            47899999999999999999999999999999999873   23333333333210  12346788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.+|++|+||||||+... .++.+.+.+
T Consensus       486 ~i~~~~g~iDilV~nAG~~~~-~~~~~~~~e  515 (676)
T TIGR02632       486 DVALAYGGVDIVVNNAGIATS-SPFEETTLQ  515 (676)
T ss_pred             HHHHhcCCCcEEEECCCCCCC-CCcccCCHH
Confidence            999999999999999998654 555555443

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.61  E-value=1.5e-14  Score=105.63  Aligned_cols=92  Identities=23%  Similarity=0.400  Sum_probs=77.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++++++|||++++||..+++.|++.|++|++++|+.   ..+....+++..    .+.++.++.+|+++.+++.++++.
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~---~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~   75 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQ---EKLEEAVAECGA----LGTEVRGYAANVTDEEDVEATFAQ   75 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHh----cCCceEEEEcCCCCHHHHHHHHHH
Confidence            5788999999999999999999999999999999873   333444444443    345677899999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCC
Q 044851          118 VVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~  136 (149)
                      +.+.++++|++|||+|...
T Consensus        76 ~~~~~~~id~vi~~ag~~~   94 (253)
T PRK08217         76 IAEDFGQLNGLINNAGILR   94 (253)
T ss_pred             HHHHcCCCCEEEECCCccC
Confidence            9888889999999999754

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.61  E-value=8.2e-15  Score=108.26  Aligned_cols=85  Identities=31%  Similarity=0.482  Sum_probs=73.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+|++||||+++|||.+++++|++.|++|++++++....                ....+.++.+|+++.++++++++
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~----------------~~~~~~~~~~D~~~~~~~~~~~~   69 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDG----------------QHENYQFVPTDVSSAEEVNHTVA   69 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccc----------------ccCceEEEEccCCCHHHHHHHHH
Confidence            47889999999999999999999999999999998874321                12346788899999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~  137 (149)
                      ++.+.++++|+||||||....
T Consensus        70 ~~~~~~g~id~li~~Ag~~~~   90 (266)
T PRK06171         70 EIIEKFGRIDGLVNNAGINIP   90 (266)
T ss_pred             HHHHHcCCCCEEEECCcccCC
Confidence            999999999999999998543

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.61  E-value=2.2e-14  Score=104.78  Aligned_cols=93  Identities=29%  Similarity=0.421  Sum_probs=75.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+|+++|||++++||.++++.|++.|++|++++|+..  ........++..    .+.++.++.+|+++.+++..+++
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~--~~~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~~~   76 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKA--PRANKVVAEIEA----AGGRASAVGADLTDEESVAALMD   76 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCch--HhHHHHHHHHHh----cCCceEEEEcCCCCHHHHHHHHH
Confidence            367889999999999999999999999999999888632  223333333433    34457788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCC
Q 044851          117 EVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~  135 (149)
                      ++.+.++.+|++|||+|..
T Consensus        77 ~~~~~~~~~d~vi~~ag~~   95 (248)
T PRK07806         77 TAREEFGGLDALVLNASGG   95 (248)
T ss_pred             HHHHhCCCCcEEEECCCCC
Confidence            9999999999999999874

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.61  E-value=1.2e-14  Score=105.88  Aligned_cols=100  Identities=40%  Similarity=0.657  Sum_probs=79.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEE-ecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFT-YVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +++|+++|||++++||..+++.|++.|++|+++ .|+.   .........+..    .+.++.++.+|+++.+++.+++.
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~---~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   75 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINE---EAAQELLEEIKE----EGGDAIAVKADVSSEEDVENLVE   75 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCH---HHHHHHHHHHHh----cCCeEEEEECCCCCHHHHHHHHH
Confidence            567899999999999999999999999999888 7753   233334444433    34567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      .+.+.++++|+||||+|.... ..+.+.+
T Consensus        76 ~~~~~~~~id~vi~~ag~~~~-~~~~~~~  103 (247)
T PRK05565         76 QIVEKFGKIDILVNNAGISNF-GLVTDMT  103 (247)
T ss_pred             HHHHHhCCCCEEEECCCcCCC-CChhhCC
Confidence            999999999999999998743 4444444

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.61  E-value=1.5e-14  Score=104.95  Aligned_cols=99  Identities=33%  Similarity=0.537  Sum_probs=79.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +.+++++|||++++||..++++|+++|++|++++|++   ..+.+..+++..    . ..+.++.+|+++.+++..++++
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~---~~~~~~~~~l~~----~-~~~~~~~~D~~~~~~~~~~~~~   75 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQ---KELEEAAAELNN----K-GNVLGLAADVRDEADVQRAVDA   75 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCH---HHHHHHHHHHhc----c-CcEEEEEccCCCHHHHHHHHHH
Confidence            5678999999999999999999999999999999873   333334444432    2 4577899999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      +.+.++++|+||||+|.... +++.+.+
T Consensus        76 ~~~~~~~~d~vi~~ag~~~~-~~~~~~~  102 (237)
T PRK07326         76 IVAAFGGLDVLIANAGVGHF-APVEELT  102 (237)
T ss_pred             HHHHcCCCCEEEECCCCCCC-CchhhCC
Confidence            99999999999999997654 4454443

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.61  E-value=4.5e-15  Score=110.57  Aligned_cols=95  Identities=29%  Similarity=0.353  Sum_probs=75.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .+|+++||||++|||.+++++|++.|++|++++|+.   +.+.    ++..    .  .+.++.+|++|.++++.+++++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~---~~~~----~l~~----~--~~~~~~~Dl~d~~~~~~~~~~~   69 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKE---EDVA----ALEA----E--GLEAFQLDYAEPESIAALVAQV   69 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH---HHHH----HHHH----C--CceEEEccCCCHHHHHHHHHHH
Confidence            357899999999999999999999999999999873   2222    2222    1  3667899999999999999998


Q ss_pred             HHhc-CCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          119 VNAY-DRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       119 ~~~~-g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      .+.+ +++|+||||||+... +.+.+.+.+
T Consensus        70 ~~~~~g~id~li~~Ag~~~~-~~~~~~~~~   98 (277)
T PRK05993         70 LELSGGRLDALFNNGAYGQP-GAVEDLPTE   98 (277)
T ss_pred             HHHcCCCccEEEECCCcCCC-CCcccCCHH
Confidence            7766 689999999998765 556655443

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.60  E-value=1.5e-14  Score=105.29  Aligned_cols=105  Identities=24%  Similarity=0.362  Sum_probs=80.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCC--hHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGF--DENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~  114 (149)
                      .+++|+++|||++++||..+++.|+++|++|++++|+..   .+....+++...   ....+.++.+|+++  .+++..+
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~---~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~   76 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQK---KLEKVYDAIVEA---GHPEPFAIRFDLMSAEEKEFEQF   76 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChH---HHHHHHHHHHHc---CCCCcceEEeeecccchHHHHHH
Confidence            367899999999999999999999999999999999743   334444444331   23356678899986  5678899


Q ss_pred             HHHHHHhc-CCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          115 VDEVVNAY-DRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       115 ~~~~~~~~-g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++++.+.+ +++|++|||||......++.+.+.+
T Consensus        77 ~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~  110 (239)
T PRK08703         77 AATIAEATQGKLDGIVHCAGYFYALSPLDFQTVA  110 (239)
T ss_pred             HHHHHHHhCCCCCEEEEeccccccCCCccccCHH
Confidence            99998888 7899999999986443455555443

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.60  E-value=1.7e-14  Score=104.84  Aligned_cols=94  Identities=35%  Similarity=0.542  Sum_probs=76.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +.+++++|||++++||.+++++|++.|++|+++.++..  ........++..    .+.++.++.+|+++.+++..++++
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~   76 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSE--AGAEALVAEIGA----LGGKALAVQGDVSDAESVERAVDE   76 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCch--hHHHHHHHHHHh----cCCceEEEEcCCCCHHHHHHHHHH
Confidence            56789999999999999999999999999988887632  223333344433    345678889999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~  137 (149)
                      +.+.++++|++|||+|....
T Consensus        77 ~~~~~~~id~vi~~ag~~~~   96 (248)
T PRK05557         77 AKAEFGGVDILVNNAGITRD   96 (248)
T ss_pred             HHHHcCCCCEEEECCCcCCC
Confidence            99999999999999998654

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.60  E-value=1e-14  Score=106.67  Aligned_cols=93  Identities=24%  Similarity=0.310  Sum_probs=78.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||++++||..++++|++.|++|++++++.            +..    .+..+.++.+|+++.+++.++++
T Consensus         5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~------------~~~----~~~~~~~~~~D~~~~~~~~~~~~   68 (252)
T PRK08220          5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF------------LTQ----EDYPFATFVLDVSDAAAVAQVCQ   68 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch------------hhh----cCCceEEEEecCCCHHHHHHHHH
Confidence            36789999999999999999999999999999999863            111    23457789999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      ++.+.++++|+||||+|.... .++.+.+.
T Consensus        69 ~~~~~~~~id~vi~~ag~~~~-~~~~~~~~   97 (252)
T PRK08220         69 RLLAETGPLDVLVNAAGILRM-GATDSLSD   97 (252)
T ss_pred             HHHHHcCCCCEEEECCCcCCC-CCcccCCH
Confidence            999999999999999998654 45555544

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.60  E-value=1.7e-14  Score=104.76  Aligned_cols=99  Identities=29%  Similarity=0.453  Sum_probs=79.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +.++++||||++++||..+++.|+++|+.|+++.|+...   ......++..    .+.++.++.+|+++.+++..++.+
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~   75 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEA---AEALAAELRA----AGGEARVLVFDVSDEAAVRALIEA   75 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhH---HHHHHHHHHh----cCCceEEEEccCCCHHHHHHHHHH
Confidence            456889999999999999999999999999999997432   2333333433    455678889999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDI  144 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~  144 (149)
                      +...++.+|++||++|.... .++.+.
T Consensus        76 ~~~~~~~id~vi~~ag~~~~-~~~~~~  101 (246)
T PRK05653         76 AVEAFGALDILVNNAGITRD-ALLPRM  101 (246)
T ss_pred             HHHHhCCCCEEEECCCcCCC-CChhhC
Confidence            98888999999999998654 344333

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.60  E-value=1e-14  Score=105.97  Aligned_cols=97  Identities=21%  Similarity=0.352  Sum_probs=77.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHhc
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAY  122 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  122 (149)
                      ++|||+++|||..++++|+++|++|++++++.  .+......+++..    .+.++.++.+|+++.+++..+++++.+.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~--~~~~~~~~~~l~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   74 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSG--RSDAESVVSAIQA----QGGNARLLQFDVADRVACRTLLEADIAEH   74 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHHHHH----cCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            58999999999999999999999998888752  2334444555544    34568889999999999999999999999


Q ss_pred             CCccEEEeCCcCCCCCCCCCCCCC
Q 044851          123 DRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       123 g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      +++|++|||+|+... .++.+.+.
T Consensus        75 ~~i~~li~~ag~~~~-~~~~~~~~   97 (239)
T TIGR01831        75 GAYYGVVLNAGITRD-AAFPALSE   97 (239)
T ss_pred             CCCCEEEECCCCCCC-CchhhCCH
Confidence            999999999998654 44554443

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.60  E-value=9.2e-15  Score=107.41  Aligned_cols=96  Identities=23%  Similarity=0.293  Sum_probs=76.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +|+++|||++++||.+++++|++.|++|++++|+..   ......+++.      +..+.++.+|+.+.+++..+++++.
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~---~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~   72 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAA---ALAAFADALG------DARFVPVACDLTDAASLAAALANAA   72 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHhc------CCceEEEEecCCCHHHHHHHHHHHH
Confidence            578999999999999999999999999999998632   2333333221      2356788999999999999999999


Q ss_pred             HhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          120 NAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      +.++++|++|||+|.... .++.+.+
T Consensus        73 ~~~~~~d~vi~~ag~~~~-~~~~~~~   97 (257)
T PRK07074         73 AERGPVDVLVANAGAARA-ASLHDTT   97 (257)
T ss_pred             HHcCCCCEEEECCCCCCC-CChhhCC
Confidence            999999999999998654 3444443

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.60  E-value=1.2e-14  Score=105.25  Aligned_cols=91  Identities=33%  Similarity=0.372  Sum_probs=74.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||++++||..++++|+++|++|++++|+....   .+...++..      ....++.+|+.+.+++..+++
T Consensus         4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~   74 (239)
T PRK12828          4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPL---SQTLPGVPA------DALRIGGIDLVDPQAARRAVD   74 (239)
T ss_pred             CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhH---HHHHHHHhh------cCceEEEeecCCHHHHHHHHH
Confidence            36789999999999999999999999999999999974332   223333322      235677899999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~  136 (149)
                      ++.+.++++|+|||++|...
T Consensus        75 ~~~~~~~~~d~vi~~ag~~~   94 (239)
T PRK12828         75 EVNRQFGRLDALVNIAGAFV   94 (239)
T ss_pred             HHHHHhCCcCEEEECCcccC
Confidence            99999999999999999754

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.60  E-value=1.5e-14  Score=106.25  Aligned_cols=88  Identities=32%  Similarity=0.508  Sum_probs=72.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||++++||.+++++|+++|++|++++|+.   ....+..+++       .  ..++.+|+++.+++..+++
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~---~~~~~~~~~~-------~--~~~~~~D~~~~~~~~~~~~   71 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDP---EAGKAAADEV-------G--GLFVPTDVTDEDAVNALFD   71 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHc-------C--CcEEEeeCCCHHHHHHHHH
Confidence            36789999999999999999999999999999999863   2222222211       1  2578899999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~  136 (149)
                      ++.+.++++|++|||+|...
T Consensus        72 ~~~~~~~~id~vi~~ag~~~   91 (255)
T PRK06057         72 TAAETYGSVDIAFNNAGISP   91 (255)
T ss_pred             HHHHHcCCCCEEEECCCcCC
Confidence            99998999999999999864

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.59  E-value=1.2e-14  Score=108.04  Aligned_cols=93  Identities=30%  Similarity=0.359  Sum_probs=74.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      |++|||||++|||.+++++|++.|++|++++|+.   ..+.    .+..      ..+.++.+|+++.++++.+++.+.+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~---~~~~----~~~~------~~~~~~~~Dl~~~~~~~~~~~~~~~   68 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKA---EDVE----ALAA------AGFTAVQLDVNDGAALARLAEELEA   68 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCH---HHHH----HHHH------CCCeEEEeeCCCHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999863   2222    1221      1356788999999999999999999


Q ss_pred             hcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          121 AYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       121 ~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      .++++|+||||+|+... +++.+.+.+
T Consensus        69 ~~~~id~vi~~ag~~~~-~~~~~~~~~   94 (274)
T PRK05693         69 EHGGLDVLINNAGYGAM-GPLLDGGVE   94 (274)
T ss_pred             hcCCCCEEEECCCCCCC-CCcccCCHH
Confidence            99999999999998654 455555433

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.59  E-value=1.5e-14  Score=106.43  Aligned_cols=97  Identities=36%  Similarity=0.516  Sum_probs=76.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++++++|||++++||..++++|+++|++|++++|+..   ...+..+...      ..++.++.+|+++++++..++++
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~---~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~   79 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEA---ALAATAARLP------GAKVTATVADVADPAQVERVFDT   79 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHh------cCceEEEEccCCCHHHHHHHHHH
Confidence            67899999999999999999999999999999998632   2222222221      12567889999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVED  143 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~  143 (149)
                      +.+.++++|+||||+|.......+.+
T Consensus        80 ~~~~~~~~d~vi~~ag~~~~~~~~~~  105 (264)
T PRK12829         80 AVERFGGLDVLVNNAGIAGPTGGIDE  105 (264)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCCccc
Confidence            99999999999999998733233333

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.59  E-value=9e-15  Score=108.68  Aligned_cols=99  Identities=23%  Similarity=0.326  Sum_probs=75.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .|+|++||||+.|||+++|++|+++|.+|++++|+   .+++....+++.+.   ...++.++.+|+++.+.+   .+.+
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt---~~KL~~v~kEI~~~---~~vev~~i~~Dft~~~~~---ye~i  118 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRT---QEKLEAVAKEIEEK---YKVEVRIIAIDFTKGDEV---YEKL  118 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHHHHHH---hCcEEEEEEEecCCCchh---HHHH
Confidence            35899999999999999999999999999999998   55666666666643   346788899999998863   3333


Q ss_pred             HHhcC--CccEEEeCCcCCCC-CCCCCCCCC
Q 044851          119 VNAYD--RIDILVNNAAEQYE-CGSVEDIDE  146 (149)
Q Consensus       119 ~~~~g--~id~li~~ag~~~~-~~~~~~~s~  146 (149)
                      .+...  .+.+||||+|+... +..+.+.+.
T Consensus       119 ~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~  149 (312)
T KOG1014|consen  119 LEKLAGLDVGILVNNVGMSYDYPESFLKYPE  149 (312)
T ss_pred             HHHhcCCceEEEEecccccCCCcHHHHhCch
Confidence            33333  46689999999873 245655544

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.59  E-value=2.8e-14  Score=104.43  Aligned_cols=106  Identities=36%  Similarity=0.534  Sum_probs=79.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCC-CCceEEEecCCC-hHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA-KDPMAISADLGF-DENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~-~~~v~~~  114 (149)
                      .+.+++++|||+++|||+++|+.|++.|+.|+++.++.... ......+....    .+ ..+.+..+|+++ .++++.+
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~Dvs~~~~~v~~~   76 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEE-AAEALAAAIKE----AGGGRAAAVAADVSDDEESVEAL   76 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchh-hHHHHHHHHHh----cCCCcEEEEEecCCCCHHHHHHH
Confidence            35788999999999999999999999999988888764321 11112211111    22 356778899998 9999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.+.+|++|++|||||+.....++.+.+.+
T Consensus        77 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~  109 (251)
T COG1028          77 VAAAEEEFGRIDILVNNAGIAGPDAPLEELTEE  109 (251)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCChhhCCHH
Confidence            999999999999999999997642255555543

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.59  E-value=3.2e-14  Score=103.37  Aligned_cols=101  Identities=35%  Similarity=0.494  Sum_probs=78.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +..+++||||++++||.+++++|+++|++|+++.++.  ..........+..    .+.++.++.+|+++.+++..++++
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~   77 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSD--EEAAEELVEAVEA----LGRRAQAVQADVTDKAALEAAVAA   77 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCC--HHHHHHHHHHHHh----cCCceEEEECCcCCHHHHHHHHHH
Confidence            4567899999999999999999999999988777652  2222333333333    345678899999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      +.+.++.+|++||++|.... ..+.+.+
T Consensus        78 ~~~~~~~id~vi~~ag~~~~-~~~~~~~  104 (249)
T PRK12825         78 AVERFGRIDILVNNAGIFED-KPLADMS  104 (249)
T ss_pred             HHHHcCCCCEEEECCccCCC-CChhhCC
Confidence            98888999999999997654 4544443

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.58  E-value=1.2e-14  Score=107.95  Aligned_cols=95  Identities=25%  Similarity=0.359  Sum_probs=75.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      .|++|||||+++||..++++|++.|++|+++.|+.   +.+....+.       ....+.++.+|+++.+++.+++.++.
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~---~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~   71 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRP---DALDDLKAR-------YGDRLWVLQLDVTDSAAVRAVVDRAF   71 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHh-------ccCceEEEEccCCCHHHHHHHHHHHH
Confidence            36899999999999999999999999999999863   222222111       22356788999999999999999999


Q ss_pred             HhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          120 NAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      +.++++|+||||+|.... .+..+.+
T Consensus        72 ~~~~~id~vi~~ag~~~~-~~~~~~~   96 (276)
T PRK06482         72 AALGRIDVVVSNAGYGLF-GAAEELS   96 (276)
T ss_pred             HHcCCCCEEEECCCCCCC-cccccCC
Confidence            989999999999998764 4444443

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.58  E-value=2.9e-14  Score=104.29  Aligned_cols=89  Identities=28%  Similarity=0.478  Sum_probs=71.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|+++|||++++||++++++|++.|++|+++.++.  .........+       ...++.++.+|+++++++..++++
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~--~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~   73 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQS--EDAAEALADE-------LGDRAIALQADVTDREQVQAMFAT   73 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCC--HHHHHHHHHH-------hCCceEEEEcCCCCHHHHHHHHHH
Confidence            5678999999999999999999999999998876542  2222222221       124577889999999999999999


Q ss_pred             HHHhcCC-ccEEEeCCcCC
Q 044851          118 VVNAYDR-IDILVNNAAEQ  135 (149)
Q Consensus       118 ~~~~~g~-id~li~~ag~~  135 (149)
                      +.+.++. +|++|||+|+.
T Consensus        74 ~~~~~g~~id~li~~ag~~   92 (253)
T PRK08642         74 ATEHFGKPITTVVNNALAD   92 (253)
T ss_pred             HHHHhCCCCeEEEECCCcc
Confidence            9988887 99999999874

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.58  E-value=1.1e-14  Score=103.25  Aligned_cols=95  Identities=24%  Similarity=0.207  Sum_probs=77.3

Q ss_pred             CCCEEEEecCC-ChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGGD-SGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~s-~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      ..|.++|||++ ||||.+++++|.+.|+.|+.+.|+......+.            ....+....+|+++++++..+..+
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~------------~~~gl~~~kLDV~~~~~V~~v~~e   73 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLA------------IQFGLKPYKLDVSKPEEVVTVSGE   73 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHH------------HhhCCeeEEeccCChHHHHHHHHH
Confidence            34679999986 57999999999999999999999754433322            123477889999999999999999


Q ss_pred             HHH-hcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          118 VVN-AYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       118 ~~~-~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      +++ .+|++|+|+||||.... .+..|.+.
T Consensus        74 vr~~~~Gkld~L~NNAG~~C~-~Pa~d~~i  102 (289)
T KOG1209|consen   74 VRANPDGKLDLLYNNAGQSCT-FPALDATI  102 (289)
T ss_pred             HhhCCCCceEEEEcCCCCCcc-cccccCCH
Confidence            988 77999999999999887 56666553

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.58  E-value=1.5e-14  Score=110.20  Aligned_cols=103  Identities=20%  Similarity=0.361  Sum_probs=71.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      ..|++++||||++|||+++|++|+++|++|++++|+.   +.+++..+++....  .+.++..+.+|+++  ++.+.+++
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~---~~l~~~~~~l~~~~--~~~~~~~~~~Dl~~--~~~~~~~~  123 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNP---DKLKDVSDSIQSKY--SKTQIKTVVVDFSG--DIDEGVKR  123 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCH---HHHHHHHHHHHHHC--CCcEEEEEEEECCC--CcHHHHHH
Confidence            3589999999999999999999999999999999973   34444455554310  12456778899985  23344444


Q ss_pred             HHHhcC--CccEEEeCCcCCCC-CCCCCCCCCC
Q 044851          118 VVNAYD--RIDILVNNAAEQYE-CGSVEDIDES  147 (149)
Q Consensus       118 ~~~~~g--~id~li~~ag~~~~-~~~~~~~s~~  147 (149)
                      +.+.++  ++|+||||||+... ...+.+.+.+
T Consensus       124 l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~  156 (320)
T PLN02780        124 IKETIEGLDVGVLINNVGVSYPYARFFHEVDEE  156 (320)
T ss_pred             HHHHhcCCCccEEEEecCcCCCCCcccccCCHH
Confidence            444444  46699999998653 2345565544

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.58  E-value=3.4e-14  Score=103.98  Aligned_cols=91  Identities=29%  Similarity=0.408  Sum_probs=75.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +|++||||++++||..++++|+++|++|++++|+..   ......+++..    .+.++.++.+|+++.+++..++.++.
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~---~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~   73 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEA---GAEAAAKVATD----AGGSVIYLVADVTKEDEIADMIAAAA   73 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHh----cCCceEEEECCCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999732   33333333433    34567889999999999999999999


Q ss_pred             HhcCCccEEEeCCcCCCC
Q 044851          120 NAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~  137 (149)
                      +.++++|+||||+|....
T Consensus        74 ~~~~~~d~vi~~a~~~~~   91 (255)
T TIGR01963        74 AEFGGLDILVNNAGIQHV   91 (255)
T ss_pred             HhcCCCCEEEECCCCCCC
Confidence            988999999999998654

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.58  E-value=3.8e-14  Score=105.60  Aligned_cols=86  Identities=22%  Similarity=0.307  Sum_probs=70.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +|+++|||+ +|||+++|++|. .|++|++++|+.   ..+.+..+++..    .+.++.++.+|+++.+++..+++++ 
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~---~~~~~~~~~l~~----~~~~~~~~~~Dv~d~~~i~~~~~~~-   71 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNE---ENLEAAAKTLRE----AGFDVSTQEVDVSSRESVKALAATA-   71 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCH---HHHHHHHHHHHh----cCCeEEEEEeecCCHHHHHHHHHHH-
Confidence            578999998 699999999996 799999999863   334444444443    3456778999999999999999988 


Q ss_pred             HhcCCccEEEeCCcCC
Q 044851          120 NAYDRIDILVNNAAEQ  135 (149)
Q Consensus       120 ~~~g~id~li~~ag~~  135 (149)
                      +.++++|+||||||+.
T Consensus        72 ~~~g~id~li~nAG~~   87 (275)
T PRK06940         72 QTLGPVTGLVHTAGVS   87 (275)
T ss_pred             HhcCCCCEEEECCCcC
Confidence            5688999999999985

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.58  E-value=4.8e-14  Score=116.12  Aligned_cols=94  Identities=31%  Similarity=0.415  Sum_probs=79.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++||||++|||.+++++|++.|++|++++|+   ...+.+..+++..    .+.++.++.+|+++.++++.+++
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~~~~~~~  440 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARN---GEALDELVAEIRA----KGGTAHAYTCDLTDSAAVDHTVK  440 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHh----cCCcEEEEEecCCCHHHHHHHHH
Confidence            4778999999999999999999999999999999997   3344444444443    34567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~  137 (149)
                      ++.+.++++|++|||||+...
T Consensus       441 ~~~~~~g~id~li~~Ag~~~~  461 (657)
T PRK07201        441 DILAEHGHVDYLVNNAGRSIR  461 (657)
T ss_pred             HHHHhcCCCCEEEECCCCCCC
Confidence            999999999999999998543

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.58  E-value=1.7e-14  Score=105.62  Aligned_cols=95  Identities=21%  Similarity=0.288  Sum_probs=74.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      +++|||++++||.+++++|+++|++|++++|+.   ..+......       .+.++.++.+|+++.+++..+++++.+.
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~---~~~~~~~~~-------~~~~~~~~~~Dl~~~~~i~~~~~~~~~~   71 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQ---ERLQELKDE-------LGDNLYIAQLDVRNRAAIEEMLASLPAE   71 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHH-------hccceEEEEecCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999863   222222221       1235778899999999999999999999


Q ss_pred             cCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          122 YDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       122 ~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      ++++|++|||+|+.....++.+.+.
T Consensus        72 ~~~id~vi~~ag~~~~~~~~~~~~~   96 (248)
T PRK10538         72 WRNIDVLVNNAGLALGLEPAHKASV   96 (248)
T ss_pred             cCCCCEEEECCCccCCCCCcccCCH
Confidence            9999999999998543234444443

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.57  E-value=3.7e-14  Score=101.39  Aligned_cols=105  Identities=23%  Similarity=0.361  Sum_probs=85.7

Q ss_pred             CCCCCEEEEecC--CChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRGMVALVTGG--DSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~--s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .++||++||+|-  ..+|++.+|+.|.++|+.+..+++.+    .+++.++++.+    ......+++||+++.+++.++
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e----~l~krv~~la~----~~~s~~v~~cDV~~d~~i~~~   74 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE----RLEKRVEELAE----ELGSDLVLPCDVTNDESIDAL   74 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH----HHHHHHHHHHh----hccCCeEEecCCCCHHHHHHH
Confidence            478999999994  46899999999999999999999863    55556666654    223357899999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCC---CCCCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYE---CGSVEDIDESRL  149 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~---~~~~~~~s~~~~  149 (149)
                      |+++.+++|++|+|||+.|+...   .+.+.|.+.|.|
T Consensus        75 f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f  112 (259)
T COG0623          75 FATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGF  112 (259)
T ss_pred             HHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHH
Confidence            99999999999999999999762   356666666543

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.57  E-value=2.2e-14  Score=98.85  Aligned_cols=91  Identities=30%  Similarity=0.483  Sum_probs=78.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      ..+|.+.+|||+.+|+|++.|++|+++|++|++.+.-.....+..+.          .+.++.+...|++++++++.++.
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vake----------lg~~~vf~padvtsekdv~aala   75 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKE----------LGGKVVFTPADVTSEKDVRAALA   75 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHH----------hCCceEEeccccCcHHHHHHHHH
Confidence            35788999999999999999999999999999998754444333222          46778999999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~  137 (149)
                      ..+.+||++|.+|||||+...
T Consensus        76 ~ak~kfgrld~~vncagia~a   96 (260)
T KOG1199|consen   76 KAKAKFGRLDALVNCAGIAYA   96 (260)
T ss_pred             HHHhhccceeeeeeccceeee
Confidence            999999999999999998653

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.57  E-value=1.8e-14  Score=102.92  Aligned_cols=95  Identities=26%  Similarity=0.398  Sum_probs=76.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .++||.+++||+.+|||+.+++.|+++|..+.++..+.+. .   +.+.++.+. . ....+.|++||+++..++++.++
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~---~a~akL~ai-~-p~~~v~F~~~DVt~~~~~~~~f~   75 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-P---EAIAKLQAI-N-PSVSVIFIKCDVTNRGDLEAAFD   75 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-H---HHHHHHhcc-C-CCceEEEEEeccccHHHHHHHHH
Confidence            4679999999999999999999999999987666554322 2   233333321 1 35678899999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~  137 (149)
                      ++...+|.+|++||+||+...
T Consensus        76 ki~~~fg~iDIlINgAGi~~d   96 (261)
T KOG4169|consen   76 KILATFGTIDILINGAGILDD   96 (261)
T ss_pred             HHHHHhCceEEEEcccccccc
Confidence            999999999999999999764

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.57  E-value=4.8e-14  Score=103.90  Aligned_cols=92  Identities=18%  Similarity=0.255  Sum_probs=73.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-CcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEG-ATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .+++++||||++|||+++|++|+++| ++|++++|+...  .+.+..+++...   ...++.++.+|++|.+++..++++
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~--~~~~~~~~l~~~---~~~~v~~~~~D~~~~~~~~~~~~~   81 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDP--RRDAAVAQMKAA---GASSVEVIDFDALDTDSHPKVIDA   81 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcch--hHHHHHHHHHhc---CCCceEEEEecCCChHHHHHHHHH
Confidence            46789999999999999999999995 899999997432  234444445431   223678899999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCC
Q 044851          118 VVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~  136 (149)
                      +.+ ++++|++|||+|+..
T Consensus        82 ~~~-~g~id~li~~ag~~~   99 (253)
T PRK07904         82 AFA-GGDVDVAIVAFGLLG   99 (253)
T ss_pred             HHh-cCCCCEEEEeeecCC
Confidence            876 589999999999854

>PRK07069 short chain dehydrogenase; Validated

Probab=99.57  E-value=2.5e-14  Score=104.55  Aligned_cols=100  Identities=24%  Similarity=0.371  Sum_probs=76.0

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHhc
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAY  122 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  122 (149)
                      ++|||++++||.++++.|+++|++|++++|+.  .+.+.+..+++....  ....+.++.+|+++.+++.++++++.+.+
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~--~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDIND--AAGLDAFAAEINAAH--GEGVAFAAVQDVTDEAQWQALLAQAADAM   77 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCc--chHHHHHHHHHHhcC--CCceEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            79999999999999999999999999999862  222333333333210  11234567899999999999999999999


Q ss_pred             CCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          123 DRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       123 g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +++|++|||+|.... ..+.+.+.+
T Consensus        78 ~~id~vi~~ag~~~~-~~~~~~~~~  101 (251)
T PRK07069         78 GGLSVLVNNAGVGSF-GAIEQIELD  101 (251)
T ss_pred             CCccEEEECCCcCCC-CChhhCCHH
Confidence            999999999998654 455555443

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.56  E-value=5.5e-15  Score=111.56  Aligned_cols=112  Identities=21%  Similarity=0.310  Sum_probs=71.5

Q ss_pred             CCCCCCCEEEEecCC--ChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHH-----HHHHHhccCCCCC-----CceEEE
Q 044851           35 SNKLRGMVALVTGGD--SGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKET-----LEMLREAKTPDAK-----DPMAIS  102 (149)
Q Consensus        35 ~~~~~~~~~litG~s--~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-----~~~~~~  102 (149)
                      +..++||++||||++  +|||+++|+.|+++|++|++.++.+. .......     .......  ..+.     .+..+.
T Consensus         3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~-~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~   79 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPI-YKIFSQSLELGKFDASRKL--SNGSLLTFAKIYPMD   79 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccch-hhhhhhhcccccccccccc--cccchhhhhhHHHhh
Confidence            446789999999995  99999999999999999999765310 0000000     0000000  0000     011112


Q ss_pred             ecCCCh------------------HHHHHHHHHHHHhcCCccEEEeCCcCCCC-CCCCCCCCCCCC
Q 044851          103 ADLGFD------------------ENCKRVVDEVVNAYDRIDILVNNAAEQYE-CGSVEDIDESRL  149 (149)
Q Consensus       103 ~Dv~~~------------------~~v~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~s~~~~  149 (149)
                      .|+++.                  ++++++++++.+++|++|+||||||+... ..++.+++.++|
T Consensus        80 ~d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~  145 (299)
T PRK06300         80 ASFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGY  145 (299)
T ss_pred             hhcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHH
Confidence            233222                  35899999999999999999999997532 357777776654

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.56  E-value=3.4e-14  Score=105.79  Aligned_cols=103  Identities=21%  Similarity=0.187  Sum_probs=81.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      ...+|.|+|||+.+|+|..+|++|.+.|++|++.+.++...+.+.   .+.      ...+...+++|++++++|+++.+
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~---~~~------~s~rl~t~~LDVT~~esi~~a~~   96 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLR---GET------KSPRLRTLQLDVTKPESVKEAAQ   96 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHh---hhh------cCCcceeEeeccCCHHHHHHHHH
Confidence            356789999999999999999999999999999887644333222   221      13456778999999999999999


Q ss_pred             HHHHhcC--CccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYD--RIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g--~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      .+.++.+  .++.||||||+....++.+.++.++
T Consensus        97 ~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d  130 (322)
T KOG1610|consen   97 WVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVED  130 (322)
T ss_pred             HHHHhcccccceeEEeccccccccCccccccHHH
Confidence            9888764  5999999999887667777766554

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.54  E-value=1.1e-13  Score=95.26  Aligned_cols=101  Identities=16%  Similarity=0.232  Sum_probs=76.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      ++++|||++++||.+++++|.++|+. |+++.|+..........+.++..    .+.++.++.+|+++.+++..++.++.
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~   76 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEA----LGAEVTVVACDVADRAALAAALAAIP   76 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHh----cCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            46899999999999999999999974 77788765433322222334433    34567788999999999999999998


Q ss_pred             HhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          120 NAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      ..++++|+||||+|.... ..+.+.+.
T Consensus        77 ~~~~~id~li~~ag~~~~-~~~~~~~~  102 (180)
T smart00822       77 ARLGPLRGVIHAAGVLDD-GLLANLTP  102 (180)
T ss_pred             HHcCCeeEEEEccccCCc-cccccCCH
Confidence            889999999999998654 34444433

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.54  E-value=7.9e-14  Score=110.45  Aligned_cols=100  Identities=27%  Similarity=0.405  Sum_probs=78.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .++++++||||+++|||..++++|++.|++|+++++... .+.+.+..++       .  ...++.+|+++.++++.+++
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~-~~~l~~~~~~-------~--~~~~~~~Dv~~~~~~~~~~~  276 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAA-GEALAAVANR-------V--GGTALALDITAPDAPARIAE  276 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCcc-HHHHHHHHHH-------c--CCeEEEEeCCCHHHHHHHHH
Confidence            467899999999999999999999999999999887422 2222222211       1  23578899999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      .+.+.++++|+||||+|+... +.+.+.+.+
T Consensus       277 ~~~~~~g~id~vi~~AG~~~~-~~~~~~~~~  306 (450)
T PRK08261        277 HLAERHGGLDIVVHNAGITRD-KTLANMDEA  306 (450)
T ss_pred             HHHHhCCCCCEEEECCCcCCC-CChhhCCHH
Confidence            999999999999999998765 556665544

>PRK08324 short chain dehydrogenase; Validated

Probab=99.54  E-value=1.1e-13  Score=114.84  Aligned_cols=102  Identities=28%  Similarity=0.460  Sum_probs=82.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+|+++||||+++||..++++|.+.|++|++++|+.   ..+.....++..    . ..+.++.+|+++.+++..+++
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~---~~~~~~~~~l~~----~-~~v~~v~~Dvtd~~~v~~~~~  490 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDE---EAAEAAAAELGG----P-DRALGVACDVTDEAAVQAAFE  490 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCH---HHHHHHHHHHhc----c-CcEEEEEecCCCHHHHHHHHH
Confidence            36789999999999999999999999999999999973   333333333332    1 457789999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.+|++|++|||+|+... .++.+.+.+
T Consensus       491 ~~~~~~g~iDvvI~~AG~~~~-~~~~~~~~~  520 (681)
T PRK08324        491 EAALAFGGVDIVVSNAGIAIS-GPIEETSDE  520 (681)
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CChhhCCHH
Confidence            999999999999999998765 556555443

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.53  E-value=2.3e-13  Score=104.94  Aligned_cols=92  Identities=20%  Similarity=0.263  Sum_probs=71.5

Q ss_pred             CCCEEEEecCCChHHHH--HHHHHHHcCCcEEEEecCCCChH---------HHHHHHHHHHhccCCCCCCceEEEecCCC
Q 044851           39 RGMVALVTGGDSGIGRA--VCHCFAQEGATVAFTYVKPQEDK---------DAKETLEMLREAKTPDAKDPMAISADLGF  107 (149)
Q Consensus        39 ~~~~~litG~s~gig~~--~a~~L~~~g~~Vi~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~  107 (149)
                      .+|++||||+++|||.+  +|+.| +.|++|+++++......         ......+.+..    .+..+..+.||+++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~----~G~~a~~i~~DVss  114 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKA----AGLYAKSINGDAFS  114 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHh----cCCceEEEEcCCCC
Confidence            46899999999999999  89999 99999888875321111         01112222222    34456788999999


Q ss_pred             hHHHHHHHHHHHHhcCCccEEEeCCcCC
Q 044851          108 DENCKRVVDEVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       108 ~~~v~~~~~~~~~~~g~id~li~~ag~~  135 (149)
                      .++++++++++.+.+|+||+||||+|..
T Consensus       115 ~E~v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        115 DEIKQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence            9999999999999999999999999986

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.51  E-value=2.3e-13  Score=98.58  Aligned_cols=89  Identities=39%  Similarity=0.568  Sum_probs=73.0

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHhc
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAY  122 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  122 (149)
                      +||||++++||..++++|+++|++|++++|+.  ...+......+..    .+.++.++.+|+++.+++++++..+.+.+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~--~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSS--EEGAEEVVEELKA----YGVKALGVVCDVSDREDVKAVVEEIEEEL   74 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCc--hhHHHHHHHHHHh----cCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            58999999999999999999999999998863  1223333344433    34567889999999999999999999999


Q ss_pred             CCccEEEeCCcCCCC
Q 044851          123 DRIDILVNNAAEQYE  137 (149)
Q Consensus       123 g~id~li~~ag~~~~  137 (149)
                      +++|+||||+|....
T Consensus        75 ~~id~vi~~ag~~~~   89 (239)
T TIGR01830        75 GPIDILVNNAGITRD   89 (239)
T ss_pred             CCCCEEEECCCCCCC
Confidence            999999999998654

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.51  E-value=2.4e-13  Score=99.16  Aligned_cols=95  Identities=18%  Similarity=0.164  Sum_probs=73.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      |+++||||++|||.+++++|++.|++|++++|+.   +......+.+...   .+.++.++.+|+++.+++.++++++.+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~---~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~   75 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDV---ERLERLADDLRAR---GAVAVSTHELDILDTASHAAFLDSLPA   75 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCH---HHHHHHHHHHHHh---cCCeEEEEecCCCChHHHHHHHHHHhh
Confidence            5799999999999999999999999999999974   3333333333321   244678899999999999999998754


Q ss_pred             hcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          121 AYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       121 ~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                         .+|++|||+|.... ..+.+.+
T Consensus        76 ---~~d~vv~~ag~~~~-~~~~~~~   96 (243)
T PRK07102         76 ---LPDIVLIAVGTLGD-QAACEAD   96 (243)
T ss_pred             ---cCCEEEECCcCCCC-cccccCC
Confidence               46999999998654 4444443

>PRK12742 oxidoreductase; Provisional

Probab=99.49  E-value=2.8e-13  Score=98.28  Aligned_cols=94  Identities=31%  Similarity=0.441  Sum_probs=68.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||+++++.|+++|++|+++.++.  .+...+...+       .  ...++.+|+++.+++.+++.
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~--~~~~~~l~~~-------~--~~~~~~~D~~~~~~~~~~~~   71 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGS--KDAAERLAQE-------T--GATAVQTDSADRDAVIDVVR   71 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCC--HHHHHHHHHH-------h--CCeEEecCCCCHHHHHHHHH
Confidence            36789999999999999999999999999998877641  2222222211       1  24567899999888776664


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                          .++++|++|||+|.... ....+.+.
T Consensus        72 ----~~~~id~li~~ag~~~~-~~~~~~~~   96 (237)
T PRK12742         72 ----KSGALDILVVNAGIAVF-GDALELDA   96 (237)
T ss_pred             ----HhCCCcEEEECCCCCCC-CCcccCCH
Confidence                35789999999998654 34444443

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.48  E-value=9.8e-14  Score=101.33  Aligned_cols=93  Identities=37%  Similarity=0.523  Sum_probs=74.1

Q ss_pred             cCC--ChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHhc-C
Q 044851           47 GGD--SGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAY-D  123 (149)
Q Consensus        47 G~s--~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g  123 (149)
                      |++  +|||+++|++|++.|++|++++|+   .+++.+.++++.++   .+  ..++.+|++++++++.+++++.+.+ |
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~---~~~~~~~~~~l~~~---~~--~~~~~~D~~~~~~v~~~~~~~~~~~~g   72 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRN---EEKLADALEELAKE---YG--AEVIQCDLSDEESVEALFDEAVERFGG   72 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESS---HHHHHHHHHHHHHH---TT--SEEEESCTTSHHHHHHHHHHHHHHHCS
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCC---hHHHHHHHHHHHHH---cC--CceEeecCcchHHHHHHHHHHHhhcCC
Confidence            555  999999999999999999999997   44444555555542   22  2369999999999999999999999 9


Q ss_pred             CccEEEeCCcCCCC---CCCCCCCCCC
Q 044851          124 RIDILVNNAAEQYE---CGSVEDIDES  147 (149)
Q Consensus       124 ~id~li~~ag~~~~---~~~~~~~s~~  147 (149)
                      ++|+||||+|....   ..++.+.+.+
T Consensus        73 ~iD~lV~~a~~~~~~~~~~~~~~~~~~   99 (241)
T PF13561_consen   73 RIDILVNNAGISPPSNVEKPLLDLSEE   99 (241)
T ss_dssp             SESEEEEEEESCTGGGTSSSGGGSHHH
T ss_pred             CeEEEEecccccccccCCCChHhCCHH
Confidence            99999999998764   3456555443

...

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.48  E-value=4.7e-13  Score=98.18  Aligned_cols=93  Identities=24%  Similarity=0.226  Sum_probs=69.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      ++++||||++++||..++++|++.|++|+++.|+.   ....+..+....    .+..+.++.+|+++.+++..++.   
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~---~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~---   71 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIA---PQVTALRAEAAR----RGLALRVEKLDLTDAIDRAQAAE---   71 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHh----cCCcceEEEeeCCCHHHHHHHhc---
Confidence            56899999999999999999999999999999863   222222222222    34457888999999988776543   


Q ss_pred             HhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          120 NAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                         +++|+||||+|.... .++.+.+.
T Consensus        72 ---~~id~vi~~ag~~~~-~~~~~~~~   94 (257)
T PRK09291         72 ---WDVDVLLNNAGIGEA-GAVVDIPV   94 (257)
T ss_pred             ---CCCCEEEECCCcCCC-cCcccCCH
Confidence               379999999998754 45555443

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.48  E-value=3.3e-13  Score=98.75  Aligned_cols=98  Identities=19%  Similarity=0.266  Sum_probs=73.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      |+++|||+++|||++++++|+++|++|++++|+..  +.+.+    +...   .+..++++.+|+++.+++..+++++.+
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~--~~~~~----~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~   72 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTEN--KELTK----LAEQ---YNSNLTFHSLDLQDVHELETNFNEILS   72 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCch--HHHHH----HHhc---cCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            57999999999999999999999999999998632  22222    2111   234677899999999999999999887


Q ss_pred             hcCC--cc--EEEeCCcCCCCCCCCCCCCCC
Q 044851          121 AYDR--ID--ILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       121 ~~g~--id--~li~~ag~~~~~~~~~~~s~~  147 (149)
                      .++.  ++  ++|+|+|...+..++.+.+.+
T Consensus        73 ~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~  103 (251)
T PRK06924         73 SIQEDNVSSIHLINNAGMVAPIKPIEKAESE  103 (251)
T ss_pred             hcCcccCCceEEEEcceecccCcccccCCHH
Confidence            7653  22  799999986554456555544

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.48  E-value=3.3e-13  Score=122.97  Aligned_cols=105  Identities=16%  Similarity=0.172  Sum_probs=82.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCcEEEEecCCCC-----------------------------------------
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQE-GATVAFTYVKPQE-----------------------------------------   76 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~-g~~Vi~~~~~~~~-----------------------------------------   76 (149)
                      .++++|||||++|||.++|++|+++ |++|++++|+...                                         
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5789999999999999999999998 6999999997210                                         


Q ss_pred             ---hHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851           77 ---DKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus        77 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                         ..+....++.+..    .+..+.++.||++|.++++++++++.+. ++||+||||||+... +.+.+.+.++|
T Consensus      2076 ~~~~~ei~~~la~l~~----~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~-~~i~~~t~e~f 2145 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKA----AGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLAD-KHIQDKTLEEF 2145 (2582)
T ss_pred             cchhHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCC-CCcccCCHHHH
Confidence               0111122233332    4567888999999999999999999877 689999999999876 67888777654

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.47  E-value=8.1e-13  Score=97.27  Aligned_cols=90  Identities=20%  Similarity=0.324  Sum_probs=71.2

Q ss_pred             EEEEecCCChHHHHHHHHHHH----cCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           42 VALVTGGDSGIGRAVCHCFAQ----EGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~----~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|||+++|||+++|++|++    .|++|++++|+.   ..+.+..+++....  .+..+.++.+|+++.++++.+++.
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~---~~~~~~~~~l~~~~--~~~~v~~~~~Dl~~~~~v~~~~~~   76 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARND---EALRQLKAEIGAER--SGLRVVRVSLDLGAEAGLEQLLKA   76 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCH---HHHHHHHHHHHhcC--CCceEEEEEeccCCHHHHHHHHHH
Confidence            689999999999999999997    799999999973   33444445454310  234577889999999999999999


Q ss_pred             HHHhcCCc----cEEEeCCcCCC
Q 044851          118 VVNAYDRI----DILVNNAAEQY  136 (149)
Q Consensus       118 ~~~~~g~i----d~li~~ag~~~  136 (149)
                      +.+.++.+    |+||||||+..
T Consensus        77 ~~~~~g~~~~~~~~lv~nAG~~~   99 (256)
T TIGR01500        77 LRELPRPKGLQRLLLINNAGTLG   99 (256)
T ss_pred             HHhccccCCCceEEEEeCCcccC
Confidence            98877643    69999999754

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.47  E-value=5.1e-13  Score=96.52  Aligned_cols=92  Identities=21%  Similarity=0.261  Sum_probs=70.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      |+++|||++++||.+++++|++.|++|++++|++.....+    .   .     ...+.++.+|++|.+++.++++.+.+
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~----~---~-----~~~~~~~~~D~~d~~~~~~~~~~~~~   69 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL----Q---A-----LPGVHIEKLDMNDPASLDQLLQRLQG   69 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH----H---h-----ccccceEEcCCCCHHHHHHHHHHhhc
Confidence            5799999999999999999999999999999985433221    1   1     12356788999999999999988754


Q ss_pred             hcCCccEEEeCCcCCCC-CCCCCCCCC
Q 044851          121 AYDRIDILVNNAAEQYE-CGSVEDIDE  146 (149)
Q Consensus       121 ~~g~id~li~~ag~~~~-~~~~~~~s~  146 (149)
                        +++|+||||+|+... ..++.+.+.
T Consensus        70 --~~id~vi~~ag~~~~~~~~~~~~~~   94 (225)
T PRK08177         70 --QRFDLLFVNAGISGPAHQSAADATA   94 (225)
T ss_pred             --CCCCEEEEcCcccCCCCCCcccCCH
Confidence              479999999998643 123444433

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.46  E-value=4.6e-13  Score=97.67  Aligned_cols=93  Identities=20%  Similarity=0.252  Sum_probs=71.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH-HHH
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE-VVN  120 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-~~~  120 (149)
                      +++|||+++|||..++++|++.|++|++++|+...  .+      ...    .+.++.++.+|+++.+++++++.+ +.+
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~--~~------~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~   70 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP--SL------AAA----AGERLAEVELDLSDAAAAAAWLAGDLLA   70 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch--hh------hhc----cCCeEEEEEeccCCHHHHHHHHHHHHHH
Confidence            59999999999999999999999999999987421  11      111    234677889999999999998877 555


Q ss_pred             hc---CCccEEEeCCcCCCCCCCCCCCCC
Q 044851          121 AY---DRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       121 ~~---g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      .+   +++|++|||+|......++.+.+.
T Consensus        71 ~~~~~~~~~~~v~~ag~~~~~~~~~~~~~   99 (243)
T PRK07023         71 AFVDGASRVLLINNAGTVEPIGPLATLDA   99 (243)
T ss_pred             HhccCCCceEEEEcCcccCCCCccccCCH
Confidence            44   479999999998654345544443

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.46  E-value=1.1e-13  Score=95.43  Aligned_cols=99  Identities=25%  Similarity=0.314  Sum_probs=75.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +.+.|+.+++||+..|||+++++.|++.|++|+.+.|+   ...+....++       ....+.-+..|+++.+.+.+.+
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~---~a~L~sLV~e-------~p~~I~Pi~~Dls~wea~~~~l   72 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARN---EANLLSLVKE-------TPSLIIPIVGDLSAWEALFKLL   72 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecC---HHHHHHHHhh-------CCcceeeeEecccHHHHHHHhh
Confidence            35789999999999999999999999999999999997   3344444332       2233667788998865444433


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      -    ..+.+|+|+||||+... ++|.+++.++|
T Consensus        73 ~----~v~pidgLVNNAgvA~~-~pf~eiT~q~f  101 (245)
T KOG1207|consen   73 V----PVFPIDGLVNNAGVATN-HPFGEITQQSF  101 (245)
T ss_pred             c----ccCchhhhhccchhhhc-chHHHHhHHhh
Confidence            3    34679999999999876 78888887654

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.46  E-value=2e-12  Score=93.86  Aligned_cols=91  Identities=22%  Similarity=0.293  Sum_probs=74.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++++++|||++++||..+++.|++.|++|++++|+.   +.+....+.+..     ...+.++.+|+++.+++.+++++
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~   74 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNE---NKLKRMKKTLSK-----YGNIHYVVGDVSSTESARNVIEK   74 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHh-----cCCeEEEECCCCCHHHHHHHHHH
Confidence            5688999999999999999999999999999999973   333333233332     22567889999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCC
Q 044851          118 VVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~  136 (149)
                      +...++.+|.+|+|+|...
T Consensus        75 ~~~~~~~id~ii~~ag~~~   93 (238)
T PRK05786         75 AAKVLNAIDGLVVTVGGYV   93 (238)
T ss_pred             HHHHhCCCCEEEEcCCCcC
Confidence            9888889999999998743

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.45  E-value=7.2e-13  Score=95.92  Aligned_cols=87  Identities=24%  Similarity=0.241  Sum_probs=71.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .+|+++|||++++||..++++|+++|++|++++|+....                .  ...++.+|+++.+++..+++++
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------------~--~~~~~~~D~~~~~~~~~~~~~~   63 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD----------------F--PGELFACDLADIEQTAATLAQI   63 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----------------c--CceEEEeeCCCHHHHHHHHHHH
Confidence            568899999999999999999999999999999874210                1  1146789999999999999999


Q ss_pred             HHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          119 VNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      .+.+ ++|++|||+|.... .++.+.+
T Consensus        64 ~~~~-~~d~vi~~ag~~~~-~~~~~~~   88 (234)
T PRK07577         64 NEIH-PVDAIVNNVGIALP-QPLGKID   88 (234)
T ss_pred             HHhC-CCcEEEECCCCCCC-CChHHCC
Confidence            8876 58999999998665 4554444

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.45  E-value=4.4e-13  Score=97.21  Aligned_cols=88  Identities=25%  Similarity=0.271  Sum_probs=66.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|+++|||++++||.+++++|++.|++|++++|+....                ...++.++.+|++++      +++
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------------~~~~~~~~~~D~~~~------~~~   60 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD----------------LSGNFHFLQLDLSDD------LEP   60 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc----------------cCCcEEEEECChHHH------HHH
Confidence            6788999999999999999999999999999998863210                123467888999886      455


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +.+.++++|+||||+|......++.+.+.+
T Consensus        61 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~   90 (235)
T PRK06550         61 LFDWVPSVDILCNTAGILDDYKPLLDTSLE   90 (235)
T ss_pred             HHHhhCCCCEEEECCCCCCCCCCcccCCHH
Confidence            555678999999999975432345554433

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.45  E-value=7.2e-13  Score=95.77  Aligned_cols=91  Identities=26%  Similarity=0.326  Sum_probs=69.8

Q ss_pred             EEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHhcC
Q 044851           44 LVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYD  123 (149)
Q Consensus        44 litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  123 (149)
                      +|||++++||+.++++|+++|++|++++|+.   +.+.....++.     .+..+.++.+|+++.+++.+++++    .+
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~---~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~----~~   68 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSR---DRLAAAARALG-----GGAPVRTAALDITDEAAVDAFFAE----AG   68 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHh-----cCCceEEEEccCCCHHHHHHHHHh----cC
Confidence            6999999999999999999999999999863   33333333332     234577889999999999888775    47


Q ss_pred             CccEEEeCCcCCCCCCCCCCCCCC
Q 044851          124 RIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       124 ~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++|+||||+|.... +++.+.+.+
T Consensus        69 ~id~li~~ag~~~~-~~~~~~~~~   91 (230)
T PRK07041         69 PFDHVVITAADTPG-GPVRALPLA   91 (230)
T ss_pred             CCCEEEECCCCCCC-CChhhCCHH
Confidence            89999999998654 455555433

>PRK08264 short chain dehydrogenase; Validated

Probab=99.44  E-value=8.4e-13  Score=95.89  Aligned_cols=92  Identities=26%  Similarity=0.337  Sum_probs=70.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      .+.+++++||||+++||.+++++|++.|+ +|++++|+...   +.+           .+..+.++.+|+++.+++..++
T Consensus         3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~---~~~-----------~~~~~~~~~~D~~~~~~~~~~~   68 (238)
T PRK08264          3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPES---VTD-----------LGPRVVPLQLDVTDPASVAAAA   68 (238)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhh---hhh-----------cCCceEEEEecCCCHHHHHHHH
Confidence            36788999999999999999999999999 89999986321   111           1345788899999999988777


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      +.    .+++|+|||++|......++.+.+.
T Consensus        69 ~~----~~~id~vi~~ag~~~~~~~~~~~~~   95 (238)
T PRK08264         69 EA----ASDVTILVNNAGIFRTGSLLLEGDE   95 (238)
T ss_pred             Hh----cCCCCEEEECCCcCCCCCccccCCH
Confidence            65    4679999999998443345555443

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.44  E-value=1.7e-12  Score=94.38  Aligned_cols=96  Identities=21%  Similarity=0.308  Sum_probs=78.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCc-----EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGAT-----VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKR  113 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~-----Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  113 (149)
                      ..|+++|||+++|||.+++++|++....     +++.+|+   .+++++....+.+-.+....++.++.+|+++..++.+
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~---~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~   78 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRN---MSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFR   78 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCC---hhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHH
Confidence            4588999999999999999999988532     6777887   5555566666655333345577889999999999999


Q ss_pred             HHHHHHHhcCCccEEEeCCcCCCC
Q 044851          114 VVDEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       114 ~~~~~~~~~g~id~li~~ag~~~~  137 (149)
                      +..++.+++.++|.++.|||+...
T Consensus        79 A~~di~~rf~~ld~iylNAg~~~~  102 (341)
T KOG1478|consen   79 ASKDIKQRFQRLDYIYLNAGIMPN  102 (341)
T ss_pred             HHHHHHHHhhhccEEEEccccCCC
Confidence            999999999999999999998543

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.43  E-value=1.5e-12  Score=94.77  Aligned_cols=92  Identities=28%  Similarity=0.291  Sum_probs=69.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+++++|||++++||..+++.|+++|++|++++|+.   +.+.+..+.         ....++.+|+++.+++..+++
T Consensus         6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~---~~~~~~~~~---------~~~~~~~~D~~~~~~v~~~~~   73 (245)
T PRK07060          6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNA---AALDRLAGE---------TGCEPLRLDVGDDAAIRAALA   73 (245)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHH---------hCCeEEEecCCCHHHHHHHHH
Confidence            46788999999999999999999999999999999863   222222111         124577899999988877766


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      .    .+++|++|||+|.... .+..+.+
T Consensus        74 ~----~~~~d~vi~~ag~~~~-~~~~~~~   97 (245)
T PRK07060         74 A----AGAFDGLVNCAGIASL-ESALDMT   97 (245)
T ss_pred             H----hCCCCEEEECCCCCCC-CChhhCC
Confidence            5    4689999999998654 4444433

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.42  E-value=1.5e-12  Score=94.98  Aligned_cols=82  Identities=18%  Similarity=0.238  Sum_probs=65.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      ++++|||+++|||.+++++|+++|++|++++|+.   +.+    +++..    ...++.++.+|+++.++++++++++..
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~---~~~----~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~   70 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQ---SVL----DELHT----QSANIFTLAFDVTDHPGTKAALSQLPF   70 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCH---HHH----HHHHH----hcCCCeEEEeeCCCHHHHHHHHHhccc
Confidence            5799999999999999999999999999999862   222    22222    234577889999999999999887632


Q ss_pred             hcCCccEEEeCCcCCC
Q 044851          121 AYDRIDILVNNAAEQY  136 (149)
Q Consensus       121 ~~g~id~li~~ag~~~  136 (149)
                         .+|.+|+|+|...
T Consensus        71 ---~~d~~i~~ag~~~   83 (240)
T PRK06101         71 ---IPELWIFNAGDCE   83 (240)
T ss_pred             ---CCCEEEEcCcccc
Confidence               4799999998743

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.41  E-value=2.4e-12  Score=91.98  Aligned_cols=92  Identities=23%  Similarity=0.363  Sum_probs=71.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc-CCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQE-GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +.++||||.+|||+.++++|.+. |..+++..++.  .+.+....+.+..    ...+++++++|+++.+++.+++.++.
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~--~e~a~~~l~~k~~----~d~rvHii~Ldvt~deS~~~~~~~V~   77 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARD--PEKAATELALKSK----SDSRVHIIQLDVTCDESIDNFVQEVE   77 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCC--hHHhhHHHHHhhc----cCCceEEEEEecccHHHHHHHHHHHH
Confidence            46999999999999999999977 66666555541  1222333333333    56789999999999999999999998


Q ss_pred             Hhc--CCccEEEeCCcCCCCC
Q 044851          120 NAY--DRIDILVNNAAEQYEC  138 (149)
Q Consensus       120 ~~~--g~id~li~~ag~~~~~  138 (149)
                      +-.  ..+++||||||+....
T Consensus        78 ~iVg~~GlnlLinNaGi~~~y   98 (249)
T KOG1611|consen   78 KIVGSDGLNLLINNAGIALSY   98 (249)
T ss_pred             hhcccCCceEEEeccceeeec
Confidence            863  4799999999997653

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.41  E-value=2.3e-12  Score=94.78  Aligned_cols=81  Identities=19%  Similarity=0.264  Sum_probs=61.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      .++++|+++||||++|||.+++++|++.|++|++++|+..  ....    ...     ... ..++.+|+++.+++..  
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~--~~~~----~~~-----~~~-~~~~~~D~~~~~~~~~--   75 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKI--NNSE----SND-----ESP-NEWIKWECGKEESLDK--   75 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCch--hhhh----hhc-----cCC-CeEEEeeCCCHHHHHH--
Confidence            3578899999999999999999999999999999998731  1111    111     111 2567899999887653  


Q ss_pred             HHHHHhcCCccEEEeCCcCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~  135 (149)
                           .++++|+||||||+.
T Consensus        76 -----~~~~iDilVnnAG~~   90 (245)
T PRK12367         76 -----QLASLDVLILNHGIN   90 (245)
T ss_pred             -----hcCCCCEEEECCccC
Confidence                 356899999999974

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.40  E-value=1.1e-12  Score=97.73  Aligned_cols=102  Identities=27%  Similarity=0.277  Sum_probs=83.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      +.++|||+++|||+.+|.++...|++|.++.|+   ..++.+..+++.-..  ....+.+..+|+.|.+++..+++++..
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~---~~kl~~a~~~l~l~~--~~~~v~~~S~d~~~Y~~v~~~~~~l~~  108 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARS---GKKLLEAKAELELLT--QVEDVSYKSVDVIDYDSVSKVIEELRD  108 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEecc---HHHHHHHHhhhhhhh--ccceeeEeccccccHHHHHHHHhhhhh
Confidence            569999999999999999999999999999997   444444444443211  122266888999999999999999999


Q ss_pred             hcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          121 AYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       121 ~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      .++.+|.+|+|||...+ +-+.+.+.++
T Consensus       109 ~~~~~d~l~~cAG~~v~-g~f~~~s~~~  135 (331)
T KOG1210|consen  109 LEGPIDNLFCCAGVAVP-GLFEDLSPEV  135 (331)
T ss_pred             ccCCcceEEEecCcccc-cccccCCHHH
Confidence            99999999999999887 7787776553

>PRK08017 oxidoreductase; Provisional

Probab=99.39  E-value=2e-12  Score=94.82  Aligned_cols=91  Identities=30%  Similarity=0.327  Sum_probs=70.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      |+++|||++++||.++++.|+++|++|++++|+..   .++    .+..    .  .+..+.+|+++.+++..+++.+..
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~---~~~----~~~~----~--~~~~~~~D~~~~~~~~~~~~~i~~   69 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPD---DVA----RMNS----L--GFTGILLDLDDPESVERAADEVIA   69 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH---HhH----HHHh----C--CCeEEEeecCCHHHHHHHHHHHHH
Confidence            57999999999999999999999999999998632   221    1211    1  356788999999999999998876


Q ss_pred             hc-CCccEEEeCCcCCCCCCCCCCCC
Q 044851          121 AY-DRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       121 ~~-g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      .. +.+|.+|||+|.... .++.+.+
T Consensus        70 ~~~~~~~~ii~~ag~~~~-~~~~~~~   94 (256)
T PRK08017         70 LTDNRLYGLFNNAGFGVY-GPLSTIS   94 (256)
T ss_pred             hcCCCCeEEEECCCCCCc-cchhhCC
Confidence            44 679999999997654 4454444

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.33  E-value=6.8e-12  Score=90.45  Aligned_cols=81  Identities=19%  Similarity=0.191  Sum_probs=64.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      ++++|||++++||..++++|++.|++|++++|+..   ...    ++..    .  .+.++.+|+++.++++++++++..
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~---~~~----~~~~----~--~~~~~~~D~~~~~~v~~~~~~~~~   68 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAA---ALA----ALQA----L--GAEALALDVADPASVAGLAWKLDG   68 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHH---HHH----HHHh----c--cceEEEecCCCHHHHHHHHHHhcC
Confidence            47999999999999999999999999999998632   221    2221    1  245789999999999998877632


Q ss_pred             hcCCccEEEeCCcCCC
Q 044851          121 AYDRIDILVNNAAEQY  136 (149)
Q Consensus       121 ~~g~id~li~~ag~~~  136 (149)
                        +++|++|||+|...
T Consensus        69 --~~~d~vi~~ag~~~   82 (222)
T PRK06953         69 --EALDAAVYVAGVYG   82 (222)
T ss_pred             --CCCCEEEECCCccc
Confidence              47999999999864

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.32  E-value=9.7e-12  Score=90.19  Aligned_cols=77  Identities=25%  Similarity=0.365  Sum_probs=58.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC--CcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEG--ATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      +.++|||+++|||++++++|++.|  ..|++..++...  .    .         ....+.++.+|+++.++++.+.   
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~----~---------~~~~~~~~~~Dls~~~~~~~~~---   62 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--D----F---------QHDNVQWHALDVTDEAEIKQLS---   62 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--c----c---------ccCceEEEEecCCCHHHHHHHH---
Confidence            369999999999999999999986  445555554211  0    0         2345778999999999887743   


Q ss_pred             HHhcCCccEEEeCCcCCC
Q 044851          119 VNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~  136 (149)
                       +.++++|+||||+|...
T Consensus        63 -~~~~~id~li~~aG~~~   79 (235)
T PRK09009         63 -EQFTQLDWLINCVGMLH   79 (235)
T ss_pred             -HhcCCCCEEEECCcccc
Confidence             45678999999999975

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.32  E-value=1.9e-11  Score=88.49  Aligned_cols=79  Identities=27%  Similarity=0.361  Sum_probs=62.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      .++||||++|||+++++.|++.|++|++++|+   .+++.+..+++         .+.++.+|+++.+++.++++++.+ 
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~---~~~~~~~~~~~---------~~~~~~~D~~~~~~v~~~~~~~~~-   68 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGAR---RDDLEVAAKEL---------DVDAIVCDNTDPASLEEARGLFPH-   68 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHhc---------cCcEEecCCCCHHHHHHHHHHHhh-
Confidence            48999999999999999999999999999986   23332222211         245788999999999999887743 


Q ss_pred             cCCccEEEeCCcCC
Q 044851          122 YDRIDILVNNAAEQ  135 (149)
Q Consensus       122 ~g~id~li~~ag~~  135 (149)
                        ++|+||||+|..
T Consensus        69 --~id~lv~~ag~~   80 (223)
T PRK05884         69 --HLDTIVNVPAPS   80 (223)
T ss_pred             --cCcEEEECCCcc
Confidence              699999999853

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.32  E-value=2.5e-11  Score=95.03  Aligned_cols=83  Identities=19%  Similarity=0.302  Sum_probs=63.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++||||++|||.++++.|++.|++|++++|+.   +++...   ...    ....+..+.+|++|.+++.+.  
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~---~~l~~~---~~~----~~~~v~~v~~Dvsd~~~v~~~--  242 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNS---DKITLE---ING----EDLPVKTLHWQVGQEAALAEL--  242 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHH---Hhh----cCCCeEEEEeeCCCHHHHHHH--
Confidence            46789999999999999999999999999999998863   222211   111    122456788999998876543  


Q ss_pred             HHHHhcCCccEEEeCCcCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~  136 (149)
                           ++++|++|||||+..
T Consensus       243 -----l~~IDiLInnAGi~~  257 (406)
T PRK07424        243 -----LEKVDILIINHGINV  257 (406)
T ss_pred             -----hCCCCEEEECCCcCC
Confidence                 357999999999853

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.30  E-value=2.8e-11  Score=87.08  Aligned_cols=88  Identities=26%  Similarity=0.319  Sum_probs=65.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      .|+++||||+++||..+++.|+++ ++|++++|+.   ....+..+.        ...+.++.+|+++.+++.+++..+ 
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~---~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~-   69 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPA---ERLDELAAE--------LPGATPFPVDLTDPEAIAAAVEQL-   69 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCH---HHHHHHHHH--------hccceEEecCCCCHHHHHHHHHhc-
Confidence            468999999999999999999999 9999999863   222222111        123678899999999888877653 


Q ss_pred             HhcCCccEEEeCCcCCCCCCCCCCC
Q 044851          120 NAYDRIDILVNNAAEQYECGSVEDI  144 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~~~~~~~~  144 (149)
                         +++|+|||++|.... ..+.+.
T Consensus        70 ---~~id~vi~~ag~~~~-~~~~~~   90 (227)
T PRK08219         70 ---GRLDVLVHNAGVADL-GPVAES   90 (227)
T ss_pred             ---CCCCEEEECCCcCCC-CCcccC
Confidence               479999999998654 344333

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.30  E-value=1.1e-11  Score=87.91  Aligned_cols=77  Identities=17%  Similarity=0.264  Sum_probs=62.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      +++|||+++|||.+++++|+++ ++|++++|+..                        .+.||+++.++++.++++    
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------------------~~~~D~~~~~~~~~~~~~----   52 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------------------DVQVDITDPASIRALFEK----   52 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------------------ceEecCCChHHHHHHHHh----
Confidence            5999999999999999999999 89999988521                        357999999999888765    


Q ss_pred             cCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          122 YDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       122 ~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++++|+||||+|.... .++.+.+.++
T Consensus        53 ~~~id~lv~~ag~~~~-~~~~~~~~~~   78 (199)
T PRK07578         53 VGKVDAVVSAAGKVHF-APLAEMTDED   78 (199)
T ss_pred             cCCCCEEEECCCCCCC-CchhhCCHHH
Confidence            4789999999998654 5666655443

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.26  E-value=6.8e-11  Score=90.84  Aligned_cols=85  Identities=22%  Similarity=0.206  Sum_probs=65.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|++|||||+++||.+++++|++.|++|++++|+........   ..+.     ....+.++.+|+++.+++..++..
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~   73 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLF---ELLN-----LAKKIEDHFGDIRDAAKLRKAIAE   73 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHH---HHHh-----hcCCceEEEccCCCHHHHHHHHhh
Confidence            35789999999999999999999999999999998754322221   1111     123466788999999998888876


Q ss_pred             HHHhcCCccEEEeCCcCC
Q 044851          118 VVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~  135 (149)
                      .     ++|+|||+||..
T Consensus        74 ~-----~~d~vih~A~~~   86 (349)
T TIGR02622        74 F-----KPEIVFHLAAQP   86 (349)
T ss_pred             c-----CCCEEEECCccc
Confidence            4     689999999964

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.22  E-value=7.7e-11  Score=90.15  Aligned_cols=92  Identities=20%  Similarity=0.172  Sum_probs=66.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .+++++|||||+++||.+++++|.+.|++|++++|+......  ..++.+.......+..+.++.+|++|.+++.+++..
T Consensus         4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   81 (340)
T PLN02653          4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNT--QRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD   81 (340)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccc--cchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence            467889999999999999999999999999999886432100  011111110000223577889999999998888887


Q ss_pred             HHHhcCCccEEEeCCcCCC
Q 044851          118 VVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~  136 (149)
                      +     .+|+|||+||...
T Consensus        82 ~-----~~d~Vih~A~~~~   95 (340)
T PLN02653         82 I-----KPDEVYNLAAQSH   95 (340)
T ss_pred             c-----CCCEEEECCcccc
Confidence            5     5899999999854

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.22  E-value=1.8e-10  Score=93.00  Aligned_cols=89  Identities=11%  Similarity=0.137  Sum_probs=64.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhc----cC-CCCCCceEEEecCCChHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREA----KT-PDAKDPMAISADLGFDENCK  112 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~Dv~~~~~v~  112 (149)
                      .+||+++||||+|+||+.++++|++.|++|++++|+...   +....+.+...    .. ....++.++.+|+++.+++.
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ek---l~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~  154 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQR---AESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIG  154 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHH---HHHHHHHhhhhccccccccccCceEEEEecCCCHHHHH
Confidence            478999999999999999999999999999999997433   32222222110    00 01134778999999988765


Q ss_pred             HHHHHHHHhcCCccEEEeCCcCCC
Q 044851          113 RVVDEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       113 ~~~~~~~~~~g~id~li~~ag~~~  136 (149)
                      ..       ++.+|+||||+|...
T Consensus       155 ~a-------LggiDiVVn~AG~~~  171 (576)
T PLN03209        155 PA-------LGNASVVICCIGASE  171 (576)
T ss_pred             HH-------hcCCCEEEEcccccc
Confidence            43       457899999998753

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.22  E-value=1.2e-10  Score=88.76  Aligned_cols=83  Identities=18%  Similarity=0.179  Sum_probs=62.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC--CcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEG--ATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +++|+++||||+++||.+++++|++.|  +.|++++|+...   .......+      ....+.++.+|++|.+++..++
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~---~~~~~~~~------~~~~~~~v~~Dl~d~~~l~~~~   72 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELK---QWEMQQKF------PAPCLRFFIGDVRDKERLTRAL   72 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhH---HHHHHHHh------CCCcEEEEEccCCCHHHHHHHH
Confidence            467899999999999999999999986  678888876322   11111111      1235778899999998887766


Q ss_pred             HHHHHhcCCccEEEeCCcCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~  136 (149)
                      .       .+|+|||+||...
T Consensus        73 ~-------~iD~Vih~Ag~~~   86 (324)
T TIGR03589        73 R-------GVDYVVHAAALKQ   86 (324)
T ss_pred             h-------cCCEEEECcccCC
Confidence            4       4899999999753

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.20  E-value=1.4e-10  Score=88.08  Aligned_cols=85  Identities=21%  Similarity=0.236  Sum_probs=63.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .+|++|||||+++||.+++++|++.|++|+++.|+............ ...    ...++.++.+|+++.+++.+++.  
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~----~~~~~~~~~~D~~d~~~~~~~~~--   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLA-LDG----AKERLKLFKADLLDEGSFELAID--   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHh-ccC----CCCceEEEeCCCCCchHHHHHHc--
Confidence            36899999999999999999999999999988887543222211110 000    12457788999999988877764  


Q ss_pred             HHhcCCccEEEeCCcCC
Q 044851          119 VNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~  135 (149)
                           .+|+||||||..
T Consensus        77 -----~~d~vih~A~~~   88 (325)
T PLN02989         77 -----GCETVFHTASPV   88 (325)
T ss_pred             -----CCCEEEEeCCCC
Confidence                 479999999964

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.20  E-value=4.9e-10  Score=88.91  Aligned_cols=92  Identities=18%  Similarity=0.141  Sum_probs=65.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHH-------------HHHHHHHHHhccCCCCCCceEEEe
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKD-------------AKETLEMLREAKTPDAKDPMAISA  103 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~  103 (149)
                      .++++++|||||+|+||..++++|++.|++|+++++......+             ..+.+..+...   .+..+.++.+
T Consensus        44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~~v~~  120 (442)
T PLN02572         44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV---SGKEIELYVG  120 (442)
T ss_pred             cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh---hCCcceEEEC
Confidence            3677899999999999999999999999999988643211100             00111111110   1235778999


Q ss_pred             cCCChHHHHHHHHHHHHhcCCccEEEeCCcCCC
Q 044851          104 DLGFDENCKRVVDEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       104 Dv~~~~~v~~~~~~~~~~~g~id~li~~ag~~~  136 (149)
                      |++|.+.+..++...     ++|+|||+|+...
T Consensus       121 Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~  148 (442)
T PLN02572        121 DICDFEFLSEAFKSF-----EPDAVVHFGEQRS  148 (442)
T ss_pred             CCCCHHHHHHHHHhC-----CCCEEEECCCccc
Confidence            999999988888764     6899999997643

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.18  E-value=2.2e-10  Score=87.80  Aligned_cols=88  Identities=19%  Similarity=0.173  Sum_probs=64.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCCh--HHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQED--KDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      |++|||||+|+||..++++|++.|++|++++|+....  ..+.........   .....+.++.+|++|.+.+.+++...
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~l~~~~~~~   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHN---VNKARMKLHYGDLTDSSNLRRIIDEI   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhcccc---ccccceeEEEeccCCHHHHHHHHHhC
Confidence            5799999999999999999999999999998874321  111111111000   01235778899999999888888765


Q ss_pred             HHhcCCccEEEeCCcCCC
Q 044851          119 VNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~  136 (149)
                           ++|+|||+|+...
T Consensus        78 -----~~d~ViH~Aa~~~   90 (343)
T TIGR01472        78 -----KPTEIYNLAAQSH   90 (343)
T ss_pred             -----CCCEEEECCcccc
Confidence                 5899999999754

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02240 UDP-glucose 4-epimerase

Probab=99.16  E-value=6e-10  Score=85.40  Aligned_cols=92  Identities=22%  Similarity=0.211  Sum_probs=66.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++++++|||++++||..++++|.+.|++|+++++.................   .....+.++.+|+++.+++..++.
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~l~~~~~   78 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAG---DLGDNLVFHKVDLRDKEALEKVFA   78 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhc---ccCccceEEecCcCCHHHHHHHHH
Confidence            36678999999999999999999999999999988753222211111211111   012356788999999999888776


Q ss_pred             HHHHhcCCccEEEeCCcCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~  136 (149)
                      ..     .+|+|||+||...
T Consensus        79 ~~-----~~d~vih~a~~~~   93 (352)
T PLN02240         79 ST-----RFDAVIHFAGLKA   93 (352)
T ss_pred             hC-----CCCEEEEccccCC
Confidence            53     6899999999753

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.16  E-value=4.6e-10  Score=78.78  Aligned_cols=86  Identities=16%  Similarity=0.188  Sum_probs=67.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      +++||||+ |+|..++++|++.|++|++++|+.   .........+.     ....+.++.+|++|.+++..+++.+.+.
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~---~~~~~l~~~l~-----~~~~i~~~~~Dv~d~~sv~~~i~~~l~~   72 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARRE---VKLENVKREST-----TPESITPLPLDYHDDDALKLAIKSTIEK   72 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCH---HHHHHHHHHhh-----cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            58999998 787889999999999999998863   23333222221     1335678889999999999999999999


Q ss_pred             cCCccEEEeCCcCCC
Q 044851          122 YDRIDILVNNAAEQY  136 (149)
Q Consensus       122 ~g~id~li~~ag~~~  136 (149)
                      ++++|++|+.+=...
T Consensus        73 ~g~id~lv~~vh~~~   87 (177)
T PRK08309         73 NGPFDLAVAWIHSSA   87 (177)
T ss_pred             cCCCeEEEEeccccc
Confidence            999999998775543

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.13  E-value=1.9e-10  Score=91.84  Aligned_cols=90  Identities=21%  Similarity=0.229  Sum_probs=71.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +.||+++||||+|+||.++++++++.+.. +++.++++-   .+.....++....  ......++.+|+.|.+.+..+++
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~---~~~~i~~el~~~~--~~~~~~~~igdVrD~~~~~~~~~  322 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEY---KLYLIDMELREKF--PELKLRFYIGDVRDRDRVERAME  322 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchH---HHHHHHHHHHhhC--CCcceEEEecccccHHHHHHHHh
Confidence            68999999999999999999999999876 778888733   3334444444321  13567788899999999999888


Q ss_pred             HHHHhcCCccEEEeCCcCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~  137 (149)
                      ..     ++|+++|.|++-+-
T Consensus       323 ~~-----kvd~VfHAAA~KHV  338 (588)
T COG1086         323 GH-----KVDIVFHAAALKHV  338 (588)
T ss_pred             cC-----CCceEEEhhhhccC
Confidence            76     79999999999764

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.12  E-value=8.2e-10  Score=84.99  Aligned_cols=86  Identities=22%  Similarity=0.152  Sum_probs=64.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      ...++++||||++|.||..+++.|++.|++|++++|+..   ........+.     ....+.++.+|+++.+.+.+++.
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~---~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~   78 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPA---KSLHLLSKWK-----EGDRLRLFRADLQEEGSFDEAVK   78 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChH---HHHHHHHhhc-----cCCeEEEEECCCCCHHHHHHHHc
Confidence            456778999999999999999999999999999888632   2222222221     12457788999999887766653


Q ss_pred             HHHHhcCCccEEEeCCcCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~  137 (149)
                             .+|+|||+|+....
T Consensus        79 -------~~d~Vih~A~~~~~   92 (353)
T PLN02896         79 -------GCDGVFHVAASMEF   92 (353)
T ss_pred             -------CCCEEEECCccccC
Confidence                   47999999998643

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.12  E-value=6.6e-10  Score=84.37  Aligned_cols=86  Identities=20%  Similarity=0.193  Sum_probs=64.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .++++++||||+|.||..++++|++.|++|+++.|+............ ...    ....+.++.+|+++.+++..++. 
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~----~~~~~~~~~~Dl~~~~~~~~~~~-   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLA-LDG----AKERLKLFKADLLEESSFEQAIE-   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHh-ccC----CCCceEEEecCCCCcchHHHHHh-
Confidence            357899999999999999999999999999988887543322222111 000    12357788899999988777665 


Q ss_pred             HHHhcCCccEEEeCCcCC
Q 044851          118 VVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~  135 (149)
                            .+|+|||+|+..
T Consensus        77 ------~~d~vih~A~~~   88 (322)
T PLN02986         77 ------GCDAVFHTASPV   88 (322)
T ss_pred             ------CCCEEEEeCCCc
Confidence                  479999999874

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.08  E-value=1.2e-09  Score=82.69  Aligned_cols=87  Identities=23%  Similarity=0.222  Sum_probs=69.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .++.|+||||+|.||..+++.|+++|+.|..+.|++.. ++..+.+..+..    ...+.+.+..|+.+++++..+++  
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~-~k~~~~L~~l~~----a~~~l~l~~aDL~d~~sf~~ai~--   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPED-EKKTEHLRKLEG----AKERLKLFKADLLDEGSFDKAID--   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcch-hhhHHHHHhccc----CcccceEEeccccccchHHHHHh--
Confidence            56789999999999999999999999999999998654 333334444443    34458889999999998888777  


Q ss_pred             HHhcCCccEEEeCCcCCCC
Q 044851          119 VNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~~  137 (149)
                           ..|+|||.|....+
T Consensus        78 -----gcdgVfH~Asp~~~   91 (327)
T KOG1502|consen   78 -----GCDGVFHTASPVDF   91 (327)
T ss_pred             -----CCCEEEEeCccCCC
Confidence                 47999999987554

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.08  E-value=3e-09  Score=83.19  Aligned_cols=90  Identities=17%  Similarity=0.208  Sum_probs=65.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .++++++||||+|.||..+++.|+++|++|+++.|+....... ........    ....+.++.+|++|.+++..+++.
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~-~~~~~~~~----~~~~v~~v~~Dl~d~~~l~~~~~~  132 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGK-NGKEDTKK----ELPGAEVVFGDVTDADSLRKVLFS  132 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhcccc-chhhHHhh----hcCCceEEEeeCCCHHHHHHHHHH
Confidence            5678899999999999999999999999999999874321100 00111111    123577899999999998888775


Q ss_pred             HHHhcCCccEEEeCCcCC
Q 044851          118 VVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~  135 (149)
                      +   .+++|+||||+|..
T Consensus       133 ~---~~~~D~Vi~~aa~~  147 (390)
T PLN02657        133 E---GDPVDVVVSCLASR  147 (390)
T ss_pred             h---CCCCcEEEECCccC
Confidence            4   12689999999853

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.07  E-value=2.2e-09  Score=82.01  Aligned_cols=87  Identities=22%  Similarity=0.252  Sum_probs=63.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +++++++++||||+|.||..++++|++.|++|+++.|+......... ...+.     ....+.++.+|++|.+++..++
T Consensus         5 ~~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~   78 (338)
T PLN00198          5 TPTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQ-----ELGDLKIFGADLTDEESFEAPI   78 (338)
T ss_pred             cCCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcC-----CCCceEEEEcCCCChHHHHHHH
Confidence            34677899999999999999999999999999888887432221111 11111     1124678899999988776655


Q ss_pred             HHHHHhcCCccEEEeCCcCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~  135 (149)
                      .       ++|+|||+|+..
T Consensus        79 ~-------~~d~vih~A~~~   91 (338)
T PLN00198         79 A-------GCDLVFHVATPV   91 (338)
T ss_pred             h-------cCCEEEEeCCCC
Confidence            4       479999999853

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.05  E-value=4.9e-10  Score=81.57  Aligned_cols=87  Identities=18%  Similarity=0.210  Sum_probs=65.5

Q ss_pred             EEEEec-CCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           42 VALVTG-GDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        42 ~~litG-~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      +=.||. +++|||+++|+.|++.|++|+++++..    .       +..    ..    ...+|+.+.+++..+++.+.+
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~----~-------l~~----~~----~~~~Dv~d~~s~~~l~~~v~~   76 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKR----A-------LKP----EP----HPNLSIREIETTKDLLITLKE   76 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChh----h-------ccc----cc----CCcceeecHHHHHHHHHHHHH
Confidence            345565 467899999999999999999887521    0       000    00    134799999999999999999


Q ss_pred             hcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          121 AYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       121 ~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      .++++|+||||||+... .++.+++.++
T Consensus        77 ~~g~iDiLVnnAgv~d~-~~~~~~s~e~  103 (227)
T TIGR02114        77 LVQEHDILIHSMAVSDY-TPVYMTDLEQ  103 (227)
T ss_pred             HcCCCCEEEECCEeccc-cchhhCCHHH
Confidence            99999999999998654 5666665443

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02214 cinnamoyl-CoA reductase

Probab=99.04  E-value=2.6e-09  Score=82.04  Aligned_cols=85  Identities=25%  Similarity=0.231  Sum_probs=63.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++++++||||+|.||..++++|+++|++|+++.|+.....  ......+..    ....+.++.+|+++.+++..++. 
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~--~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~-   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPK--NTHLRELEG----GKERLILCKADLQDYEALKAAID-   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhh--HHHHHHhhC----CCCcEEEEecCcCChHHHHHHHh-
Confidence            45778999999999999999999999999999988643211  111222211    22346778899999888777665 


Q ss_pred             HHHhcCCccEEEeCCcCC
Q 044851          118 VVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~  135 (149)
                            .+|+|||+|+..
T Consensus        81 ------~~d~Vih~A~~~   92 (342)
T PLN02214         81 ------GCDGVFHTASPV   92 (342)
T ss_pred             ------cCCEEEEecCCC
Confidence                  479999999864

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.04  E-value=1.6e-09  Score=82.06  Aligned_cols=85  Identities=25%  Similarity=0.240  Sum_probs=62.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      ++++++||||+|.||..++++|+++|+.|+++.|+......... +..+..    ....+.++.+|+.+.+.+..++.  
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~--   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEH-LLALDG----AKERLHLFKANLLEEGSFDSVVD--   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHH-HHhccC----CCCceEEEeccccCcchHHHHHc--
Confidence            46789999999999999999999999999988887432221111 111100    12356788999999887766654  


Q ss_pred             HHhcCCccEEEeCCcCC
Q 044851          119 VNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~  135 (149)
                           .+|+|||+|+..
T Consensus        76 -----~~d~Vih~A~~~   87 (322)
T PLN02662         76 -----GCEGVFHTASPF   87 (322)
T ss_pred             -----CCCEEEEeCCcc
Confidence                 479999999864

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=98.99  E-value=6e-09  Score=79.43  Aligned_cols=84  Identities=23%  Similarity=0.326  Sum_probs=61.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      +++||||+++||..++++|++.|++|+++++...........+..+      .+..+.++.+|+++.+.+..++..    
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~~----   71 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL------GGKHPTFVEGDIRNEALLTEILHD----   71 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh------cCCCceEEEccCCCHHHHHHHHhc----
Confidence            5899999999999999999999999998876532222211111111      123456788999999888777764    


Q ss_pred             cCCccEEEeCCcCCC
Q 044851          122 YDRIDILVNNAAEQY  136 (149)
Q Consensus       122 ~g~id~li~~ag~~~  136 (149)
                       .++|+|||+||...
T Consensus        72 -~~~d~vvh~a~~~~   85 (338)
T PRK10675         72 -HAIDTVIHFAGLKA   85 (338)
T ss_pred             -CCCCEEEECCcccc
Confidence             26999999998754

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=98.97  E-value=4.5e-09  Score=80.74  Aligned_cols=84  Identities=20%  Similarity=0.155  Sum_probs=58.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEE-EEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVA-FTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +++|||||+|+||..+++.|.++|+.++ ++++.. ....... ...+.     ....+.++.+|++|.+++.++++.. 
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~-~~~~~~~-~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~~-   73 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLT-YAGNLMS-LAPVA-----QSERFAFEKVDICDRAELARVFTEH-   73 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCc-cccchhh-hhhcc-----cCCceEEEECCCcChHHHHHHHhhc-
Confidence            4699999999999999999999998855 444431 1111111 11110     1234667889999999888887753 


Q ss_pred             HhcCCccEEEeCCcCCC
Q 044851          120 NAYDRIDILVNNAAEQY  136 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~  136 (149)
                          ++|+|||+||...
T Consensus        74 ----~~D~Vih~A~~~~   86 (355)
T PRK10217         74 ----QPDCVMHLAAESH   86 (355)
T ss_pred             ----CCCEEEECCcccC
Confidence                6899999999754

>PLN02650 dihydroflavonol-4-reductase

Probab=98.96  E-value=6.2e-09  Score=80.00  Aligned_cols=85  Identities=20%  Similarity=0.154  Sum_probs=62.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      ..+++|||||+|.||..++++|++.|++|++++|+......+....   ..  ......+.++.+|+++.+.+..++.  
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~--~~~~~~~~~v~~Dl~d~~~~~~~~~--   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLL---DL--PGATTRLTLWKADLAVEGSFDDAIR--   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHH---hc--cCCCCceEEEEecCCChhhHHHHHh--
Confidence            3467999999999999999999999999999888743322222111   10  0011346788999999887776664  


Q ss_pred             HHhcCCccEEEeCCcCC
Q 044851          119 VNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~  135 (149)
                           .+|.|||+|+..
T Consensus        77 -----~~d~ViH~A~~~   88 (351)
T PLN02650         77 -----GCTGVFHVATPM   88 (351)
T ss_pred             -----CCCEEEEeCCCC
Confidence                 479999999864

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=98.92  E-value=1.7e-09  Score=80.94  Aligned_cols=85  Identities=21%  Similarity=0.243  Sum_probs=53.3

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCce----EEEecCCChHHHHHHHHH
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM----AISADLGFDENCKRVVDE  117 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Dv~~~~~v~~~~~~  117 (149)
                      +|||||+|+||.+++++|++.+.. +++++++   +..+-....++....  ....+.    .+.+|+.|.+.+..++++
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~---E~~l~~l~~~l~~~~--~~~~v~~~~~~vigDvrd~~~l~~~~~~   75 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRD---ENKLYELERELRSRF--PDPKVRFEIVPVIGDVRDKERLNRIFEE   75 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES----HHHHHHHHHHCHHHC----TTCEEEEE--CTSCCHHHHHHHHTT-
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCC---hhHHHHHHHHHhhcc--cccCcccccCceeecccCHHHHHHHHhh
Confidence            699999999999999999999865 9999997   334444444443211  112232    356899999988888876


Q ss_pred             HHHhcCCccEEEeCCcCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~  137 (149)
                      .     ++|++||.|++-+.
T Consensus        76 ~-----~pdiVfHaAA~KhV   90 (293)
T PF02719_consen   76 Y-----KPDIVFHAAALKHV   90 (293)
T ss_dssp             ------T-SEEEE------H
T ss_pred             c-----CCCEEEEChhcCCC
Confidence            5     79999999998653

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=98.92  E-value=1e-08  Score=77.14  Aligned_cols=89  Identities=22%  Similarity=0.258  Sum_probs=71.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      ++.+|||||++-||.+.+-+|.+.|+.|++++.-..........++++..    .+..+.+...|+.|.+.++++|... 
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~----~~~~v~f~~~Dl~D~~~L~kvF~~~-   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLG----EGKSVFFVEGDLNDAEALEKLFSEV-   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcC----CCCceEEEEeccCCHHHHHHHHhhc-
Confidence            46899999999999999999999999999998654433333333333333    3577899999999999999988887 


Q ss_pred             HhcCCccEEEeCCcCCCC
Q 044851          120 NAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~  137 (149)
                          .+|.|+|.|+....
T Consensus        77 ----~fd~V~Hfa~~~~v   90 (343)
T KOG1371|consen   77 ----KFDAVMHFAALAAV   90 (343)
T ss_pred             ----CCceEEeehhhhcc
Confidence                69999999997653

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.91  E-value=1.3e-08  Score=79.67  Aligned_cols=80  Identities=25%  Similarity=0.247  Sum_probs=60.9

Q ss_pred             CCCCCEEEEecC---------------CCh-HHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceE
Q 044851           37 KLRGMVALVTGG---------------DSG-IGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMA  100 (149)
Q Consensus        37 ~~~~~~~litG~---------------s~g-ig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (149)
                      .+.||++|||||               |+| +|+++|+.|...|++|++++++..    +.       .    . .  .+
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~----~~-------~----~-~--~~  246 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN----LP-------T----P-A--GV  246 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc----cc-------C----C-C--Cc
Confidence            478999999999               455 999999999999999999987531    00       0    1 1  13


Q ss_pred             EEecCCChHHHHHHHHHHHHhcCCccEEEeCCcCCCC
Q 044851          101 ISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       101 ~~~Dv~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~  137 (149)
                      ..+|+++.+++...+.   +.++++|++|+|||+...
T Consensus       247 ~~~dv~~~~~~~~~v~---~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        247 KRIDVESAQEMLDAVL---AALPQADIFIMAAAVADY  280 (399)
T ss_pred             EEEccCCHHHHHHHHH---HhcCCCCEEEEccccccc
Confidence            4579998777666554   557889999999998654

>PLN02583 cinnamoyl-CoA reductase

Probab=98.90  E-value=2.3e-08  Score=75.37  Aligned_cols=84  Identities=12%  Similarity=0.002  Sum_probs=59.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .+++++||||+|+||..++++|+++|++|+++.|+... ......+..+..    ...++.++.+|++|.+++..++.  
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~l~~----~~~~~~~~~~Dl~d~~~~~~~l~--   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGE-TEIEKEIRGLSC----EEERLKVFDVDPLDYHSILDALK--   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchh-hhHHHHHHhccc----CCCceEEEEecCCCHHHHHHHHc--
Confidence            45789999999999999999999999999999885321 122222222211    12356788899999887755443  


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                           ..|.+++.++.
T Consensus        78 -----~~d~v~~~~~~   88 (297)
T PLN02583         78 -----GCSGLFCCFDP   88 (297)
T ss_pred             -----CCCEEEEeCcc
Confidence                 46888876643

>PLN02686 cinnamoyl-CoA reductase

Probab=98.88  E-value=1.5e-08  Score=78.71  Aligned_cols=89  Identities=18%  Similarity=0.159  Sum_probs=62.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhcc--CCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAK--TPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .+++|.+|||||+++||..++++|++.|++|+++.++..   .... +..+....  ......+.++.+|++|.+++..+
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~---~~~~-l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~  125 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQE---DKEK-LREMEMFGEMGRSNDGIWTVMANLTEPESLHEA  125 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHH---HHHH-HHHHhhhccccccCCceEEEEcCCCCHHHHHHH
Confidence            467889999999999999999999999999998887632   2211 12221100  00012467788999999888777


Q ss_pred             HHHHHHhcCCccEEEeCCcCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~  136 (149)
                      +..       +|.+||.++...
T Consensus       126 i~~-------~d~V~hlA~~~~  140 (367)
T PLN02686        126 FDG-------CAGVFHTSAFVD  140 (367)
T ss_pred             HHh-------ccEEEecCeeec
Confidence            753       588888887653

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=98.87  E-value=1.6e-08  Score=75.93  Aligned_cols=82  Identities=29%  Similarity=0.265  Sum_probs=59.3

Q ss_pred             EEEecCCChHHHHHHHHHHHcC--CcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEG--ATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      ++||||+|+||..++++|++.|  .+|+++++......  .+.++.+.     ....+.++.+|+++++++.++++..  
T Consensus         2 ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~--   72 (317)
T TIGR01181         2 ILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGN--LENLADLE-----DNPRYRFVKGDIGDRELVSRLFTEH--   72 (317)
T ss_pred             EEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchh--hhhhhhhc-----cCCCcEEEEcCCcCHHHHHHHHhhc--
Confidence            8999999999999999999987  56887765321111  11111111     1235678889999999988887754  


Q ss_pred             hcCCccEEEeCCcCCC
Q 044851          121 AYDRIDILVNNAAEQY  136 (149)
Q Consensus       121 ~~g~id~li~~ag~~~  136 (149)
                         ++|+|||+|+...
T Consensus        73 ---~~d~vi~~a~~~~   85 (317)
T TIGR01181        73 ---QPDAVVHFAAESH   85 (317)
T ss_pred             ---CCCEEEEcccccC
Confidence               5899999999754

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=98.86  E-value=3.4e-08  Score=76.02  Aligned_cols=90  Identities=17%  Similarity=0.093  Sum_probs=63.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHH-HHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKD-AKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      .++++.++||||+|.||..++++|.+.|++|+++++....... ..........   .....+.++.+|+.+.+.+..++
T Consensus        12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Di~d~~~l~~~~   88 (348)
T PRK15181         12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSE---EQWSRFIFIQGDIRKFTDCQKAC   88 (348)
T ss_pred             cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhcccc---ccCCceEEEEccCCCHHHHHHHh
Confidence            3567889999999999999999999999999999886432221 1111110000   01235678889999987766655


Q ss_pred             HHHHHhcCCccEEEeCCcCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~  136 (149)
                      .       .+|+|||.|+...
T Consensus        89 ~-------~~d~ViHlAa~~~  102 (348)
T PRK15181         89 K-------NVDYVLHQAALGS  102 (348)
T ss_pred             h-------CCCEEEECccccC
Confidence            4       4799999999754

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=98.82  E-value=3e-08  Score=74.79  Aligned_cols=81  Identities=22%  Similarity=0.223  Sum_probs=59.7

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHhc
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAY  122 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  122 (149)
                      ++||||+++||..++++|.+.|++|+++++.......   .......    . ..+.++.+|+++.+++.+++..     
T Consensus         2 vlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~---~~~~~~~----~-~~~~~~~~D~~~~~~~~~~~~~-----   68 (328)
T TIGR01179         2 ILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPE---ALKRGER----I-TRVTFVEGDLRDRELLDRLFEE-----   68 (328)
T ss_pred             EEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchh---hhhhhcc----c-cceEEEECCCCCHHHHHHHHHh-----
Confidence            7999999999999999999999999887654222111   1111111    1 1466788999999998887764     


Q ss_pred             CCccEEEeCCcCCC
Q 044851          123 DRIDILVNNAAEQY  136 (149)
Q Consensus       123 g~id~li~~ag~~~  136 (149)
                      +++|++|||||...
T Consensus        69 ~~~d~vv~~ag~~~   82 (328)
T TIGR01179        69 HKIDAVIHFAGLIA   82 (328)
T ss_pred             CCCcEEEECccccC
Confidence            37999999999753

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=98.82  E-value=4.8e-08  Score=74.99  Aligned_cols=83  Identities=24%  Similarity=0.217  Sum_probs=58.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      .+|||||+|+||..++++|++.|.. |+.+++..... .. .....+.     ....+.++.+|++|.+++.+++++.  
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~~--   72 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAG-NL-ESLADVS-----DSERYVFEHADICDRAELDRIFAQH--   72 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccc-hH-HHHHhcc-----cCCceEEEEecCCCHHHHHHHHHhc--
Confidence            4899999999999999999999987 44454431111 11 1111111     1234667889999999988888753  


Q ss_pred             hcCCccEEEeCCcCCC
Q 044851          121 AYDRIDILVNNAAEQY  136 (149)
Q Consensus       121 ~~g~id~li~~ag~~~  136 (149)
                         ++|+|||+||...
T Consensus        73 ---~~d~vih~A~~~~   85 (352)
T PRK10084         73 ---QPDAVMHLAAESH   85 (352)
T ss_pred             ---CCCEEEECCcccC
Confidence               6999999999754

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=98.80  E-value=3.2e-08  Score=74.82  Aligned_cols=74  Identities=23%  Similarity=0.301  Sum_probs=58.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      +++|||++|+||..+++.|++.|++|++++|+......       +      ....+.++.+|+++.+++.+++.     
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~------~~~~~~~~~~D~~~~~~l~~~~~-----   63 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN-------L------EGLDVEIVEGDLRDPASLRKAVA-----   63 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc-------c------ccCCceEEEeeCCCHHHHHHHHh-----
Confidence            59999999999999999999999999999987432111       1      12246788999999988777664     


Q ss_pred             cCCccEEEeCCcCC
Q 044851          122 YDRIDILVNNAAEQ  135 (149)
Q Consensus       122 ~g~id~li~~ag~~  135 (149)
                        .+|++||+++..
T Consensus        64 --~~d~vi~~a~~~   75 (328)
T TIGR03466        64 --GCRALFHVAADY   75 (328)
T ss_pred             --CCCEEEEeceec
Confidence              479999999753

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=98.80  E-value=5.5e-08  Score=72.67  Aligned_cols=79  Identities=25%  Similarity=0.140  Sum_probs=64.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      ++|||||.|-||..++..|++.|+.|++++.-.....+....            ....++..|+.|.+.+.++|++.   
T Consensus         2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~------------~~~~f~~gDi~D~~~L~~vf~~~---   66 (329)
T COG1087           2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLK------------LQFKFYEGDLLDRALLTAVFEEN---   66 (329)
T ss_pred             eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhh------------ccCceEEeccccHHHHHHHHHhc---
Confidence            699999999999999999999999999998764443322111            11578999999999888888876   


Q ss_pred             cCCccEEEeCCcCCCC
Q 044851          122 YDRIDILVNNAAEQYE  137 (149)
Q Consensus       122 ~g~id~li~~ag~~~~  137 (149)
                        ++|.|||.||....
T Consensus        67 --~idaViHFAa~~~V   80 (329)
T COG1087          67 --KIDAVVHFAASISV   80 (329)
T ss_pred             --CCCEEEECcccccc
Confidence              89999999997553

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=98.78  E-value=7.9e-08  Score=70.66  Aligned_cols=83  Identities=16%  Similarity=0.236  Sum_probs=57.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      ..+++++|||++++||..+++.|++.|++|+++.|+..   ......    .    ....+.++.+|+.+..  ..+...
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~---~~~~~~----~----~~~~~~~~~~Dl~d~~--~~l~~~   81 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVD---KAKTSL----P----QDPSLQIVRADVTEGS--DKLVEA   81 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHH---HHHHhc----c----cCCceEEEEeeCCCCH--HHHHHH
Confidence            34678999999999999999999999999998888632   111111    1    1235778889999731  122222


Q ss_pred             HHHhcCCccEEEeCCcCCC
Q 044851          118 VVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~  136 (149)
                      +.   ..+|+||+|+|...
T Consensus        82 ~~---~~~d~vi~~~g~~~   97 (251)
T PLN00141         82 IG---DDSDAVICATGFRR   97 (251)
T ss_pred             hh---cCCCEEEECCCCCc
Confidence            20   26899999998753

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.78  E-value=7.2e-08  Score=72.65  Aligned_cols=86  Identities=24%  Similarity=0.287  Sum_probs=60.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +++|+++|+|+ +|+|++++..|+..|+. |+++.|+....+.+++..+++..    ....+.+..+|+.+.+++...+.
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~----~~~~~~~~~~d~~~~~~~~~~~~  198 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQ----EVPECIVNVYDLNDTEKLKAEIA  198 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhh----cCCCceeEEechhhhhHHHhhhc
Confidence            57889999999 69999999999999997 99999974222344444444543    23344556678877666554333


Q ss_pred             HHHHhcCCccEEEeCCcCC
Q 044851          117 EVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~  135 (149)
                             ..|+||||..+.
T Consensus       199 -------~~DilINaTp~G  210 (289)
T PRK12548        199 -------SSDILVNATLVG  210 (289)
T ss_pred             -------cCCEEEEeCCCC
Confidence                   359999988553

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=98.78  E-value=1.1e-07  Score=68.52  Aligned_cols=76  Identities=20%  Similarity=0.277  Sum_probs=62.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHhc
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAY  122 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  122 (149)
                      ++||||+|.||.+++++|.+.|..|+.+.++..........            ..+.++.+|+.+.+.+..+++..    
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~------------~~~~~~~~dl~~~~~~~~~~~~~----   64 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK------------LNVEFVIGDLTDKEQLEKLLEKA----   64 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH------------TTEEEEESETTSHHHHHHHHHHH----
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc------------ceEEEEEeecccccccccccccc----
Confidence            68999999999999999999999988888874433211111            15778999999999999988887    


Q ss_pred             CCccEEEeCCcCC
Q 044851          123 DRIDILVNNAAEQ  135 (149)
Q Consensus       123 g~id~li~~ag~~  135 (149)
                       .+|.+||+|+..
T Consensus        65 -~~d~vi~~a~~~   76 (236)
T PF01370_consen   65 -NIDVVIHLAAFS   76 (236)
T ss_dssp             -TESEEEEEBSSS
T ss_pred             -CceEEEEeeccc
Confidence             799999999975

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02427 UDP-apiose/xylose synthase

Probab=98.77  E-value=4.8e-08  Score=76.07  Aligned_cols=86  Identities=19%  Similarity=0.169  Sum_probs=60.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc-CCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQE-GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.++++||||+|.||..++++|++. |+.|++++++...   .........   ......+.++.+|+.|.+.+.+++.
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~---~~~l~~~~~---~~~~~~~~~~~~Dl~d~~~l~~~~~   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDK---IKHLLEPDT---VPWSGRIQFHRINIKHDSRLEGLIK   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchh---hhhhhcccc---ccCCCCeEEEEcCCCChHHHHHHhh
Confidence            45567999999999999999999998 5889988875321   111110000   0011357788999999887766654


Q ss_pred             HHHHhcCCccEEEeCCcCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~  136 (149)
                             .+|+|||+|+...
T Consensus        86 -------~~d~ViHlAa~~~   98 (386)
T PLN02427         86 -------MADLTINLAAICT   98 (386)
T ss_pred             -------cCCEEEEcccccC
Confidence                   3699999999754

>CHL00194 ycf39 Ycf39; Provisional

Probab=98.72  E-value=7.5e-08  Score=73.17  Aligned_cols=73  Identities=18%  Similarity=0.270  Sum_probs=56.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      +++||||+|.||..++++|.++|+.|+++.|+...   .    ..+.      ...+.++.+|+.|++++..++.     
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~---~----~~l~------~~~v~~v~~Dl~d~~~l~~al~-----   63 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRK---A----SFLK------EWGAELVYGDLSLPETLPPSFK-----   63 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHH---h----hhHh------hcCCEEEECCCCCHHHHHHHHC-----
Confidence            59999999999999999999999999999987321   1    1111      1246788999999887766554     


Q ss_pred             cCCccEEEeCCcC
Q 044851          122 YDRIDILVNNAAE  134 (149)
Q Consensus       122 ~g~id~li~~ag~  134 (149)
                        .+|+|||+++.
T Consensus        64 --g~d~Vi~~~~~   74 (317)
T CHL00194         64 --GVTAIIDASTS   74 (317)
T ss_pred             --CCCEEEECCCC
Confidence              47999998764

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.70  E-value=1.6e-07  Score=73.39  Aligned_cols=80  Identities=24%  Similarity=0.265  Sum_probs=60.7

Q ss_pred             CCCCCEEEEecC---------------CCh-HHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceE
Q 044851           37 KLRGMVALVTGG---------------DSG-IGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMA  100 (149)
Q Consensus        37 ~~~~~~~litG~---------------s~g-ig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (149)
                      .++||.++||||               |+| +|.++|+.|...|++|+++++.....                ...  ..
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------------~~~--~~  243 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------------TPP--GV  243 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------------CCC--Cc
Confidence            378999999999               666 99999999999999999888653210                011  12


Q ss_pred             EEecCCChHHH-HHHHHHHHHhcCCccEEEeCCcCCCC
Q 044851          101 ISADLGFDENC-KRVVDEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       101 ~~~Dv~~~~~v-~~~~~~~~~~~g~id~li~~ag~~~~  137 (149)
                      ..+|+++.+++ +.+++++   ++.+|++|+|||+...
T Consensus       244 ~~~~v~~~~~~~~~~~~~~---~~~~D~~i~~Aavsd~  278 (390)
T TIGR00521       244 KSIKVSTAEEMLEAALNEL---AKDFDIFISAAAVADF  278 (390)
T ss_pred             EEEEeccHHHHHHHHHHhh---cccCCEEEEccccccc
Confidence            45799988887 5555443   4679999999999765

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=98.70  E-value=9.9e-08  Score=66.61  Aligned_cols=70  Identities=21%  Similarity=0.289  Sum_probs=56.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHhc
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAY  122 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  122 (149)
                      ++|+||+|.+|..+++.|.+.|++|+++.|++.+.+   +            ...+.++.+|+.|.+++..++.      
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~---~------------~~~~~~~~~d~~d~~~~~~al~------   59 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAE---D------------SPGVEIIQGDLFDPDSVKAALK------   59 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHH---H------------CTTEEEEESCTTCHHHHHHHHT------
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhcc---c------------ccccccceeeehhhhhhhhhhh------
Confidence            689999999999999999999999999999843221   1            2457889999999876666555      


Q ss_pred             CCccEEEeCCcC
Q 044851          123 DRIDILVNNAAE  134 (149)
Q Consensus       123 g~id~li~~ag~  134 (149)
                       ..|.+|+++|.
T Consensus        60 -~~d~vi~~~~~   70 (183)
T PF13460_consen   60 -GADAVIHAAGP   70 (183)
T ss_dssp             -TSSEEEECCHS
T ss_pred             -hcchhhhhhhh
Confidence             57999999875

...

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=98.63  E-value=1.4e-07  Score=71.15  Aligned_cols=66  Identities=23%  Similarity=0.284  Sum_probs=53.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      ++|||||+|.||.+++++|.+.| +|+.+++..                        ..+..|++|.+.+.++++..   
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~------------------------~~~~~Dl~d~~~~~~~~~~~---   53 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHS------------------------TDYCGDFSNPEGVAETVRKI---   53 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEecccc------------------------ccccCCCCCHHHHHHHHHhc---
Confidence            59999999999999999999999 788777641                        01346999998888777753   


Q ss_pred             cCCccEEEeCCcCCCC
Q 044851          122 YDRIDILVNNAAEQYE  137 (149)
Q Consensus       122 ~g~id~li~~ag~~~~  137 (149)
                        ++|+|||+|+....
T Consensus        54 --~~D~Vih~Aa~~~~   67 (299)
T PRK09987         54 --RPDVIVNAAAHTAV   67 (299)
T ss_pred             --CCCEEEECCccCCc
Confidence              58999999998653

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=98.61  E-value=1.6e-07  Score=70.45  Aligned_cols=77  Identities=21%  Similarity=0.270  Sum_probs=57.3

Q ss_pred             EEecCCChHHHHHHHHHHHcC--CcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           44 LVTGGDSGIGRAVCHCFAQEG--ATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        44 litG~s~gig~~~a~~L~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      |||||+|.||..++++|+++|  ..|.++++......  ....   .     ......++.+|++|.+++.++++     
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~---~-----~~~~~~~~~~Di~d~~~l~~a~~-----   65 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDL---Q-----KSGVKEYIQGDITDPESLEEALE-----   65 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhh---h-----cccceeEEEeccccHHHHHHHhc-----
Confidence            699999999999999999999  67888887643221  1111   1     11122388999999998888776     


Q ss_pred             cCCccEEEeCCcCCCC
Q 044851          122 YDRIDILVNNAAEQYE  137 (149)
Q Consensus       122 ~g~id~li~~ag~~~~  137 (149)
                        ..|+|||+|+....
T Consensus        66 --g~d~V~H~Aa~~~~   79 (280)
T PF01073_consen   66 --GVDVVFHTAAPVPP   79 (280)
T ss_pred             --CCceEEEeCccccc
Confidence              46999999998654

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.61  E-value=3.3e-07  Score=76.27  Aligned_cols=86  Identities=13%  Similarity=0.096  Sum_probs=60.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc--CCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQE--GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +++++|||||+|.||..++++|.+.  +++|+++++... ......... ..     ....+.++.+|++|.+.+..++.
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~-~~~~~~l~~-~~-----~~~~v~~~~~Dl~d~~~~~~~~~   77 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDY-CSNLKNLNP-SK-----SSPNFKFVKGDIASADLVNYLLI   77 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCc-cchhhhhhh-cc-----cCCCeEEEECCCCChHHHHHHHh
Confidence            4678999999999999999999998  567888876421 111111110 00     12357788899999887666543


Q ss_pred             HHHHhcCCccEEEeCCcCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~  136 (149)
                      .     ..+|+|||+|+...
T Consensus        78 ~-----~~~D~ViHlAa~~~   92 (668)
T PLN02260         78 T-----EGIDTIMHFAAQTH   92 (668)
T ss_pred             h-----cCCCEEEECCCccC
Confidence            2     26999999999864

>TIGR01746 Thioester-redct thioester reductase domain

Probab=98.59  E-value=4.5e-07  Score=69.31  Aligned_cols=92  Identities=18%  Similarity=0.194  Sum_probs=57.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CcEEEEecCCCChHHHHHHHHHHHhccC---CCC-CCceEEEecCCChHH--HHH
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEG--ATVAFTYVKPQEDKDAKETLEMLREAKT---PDA-KDPMAISADLGFDEN--CKR  113 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~Dv~~~~~--v~~  113 (149)
                      +++||||+|+||..+++.|++.|  ++|+++.|+...........+.+.....   ... .++.++.+|++++..  -..
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            38999999999999999999998  6699998875422222222222211000   001 467888899986531  011


Q ss_pred             HHHHHHHhcCCccEEEeCCcCCC
Q 044851          114 VVDEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       114 ~~~~~~~~~g~id~li~~ag~~~  136 (149)
                      .+..+.   ..+|++||||+...
T Consensus        81 ~~~~~~---~~~d~vih~a~~~~  100 (367)
T TIGR01746        81 EWERLA---ENVDTIVHNGALVN  100 (367)
T ss_pred             HHHHHH---hhCCEEEeCCcEec
Confidence            122221   36899999999754

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=98.59  E-value=5.2e-07  Score=69.26  Aligned_cols=78  Identities=14%  Similarity=0.054  Sum_probs=55.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc-CCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCC-ChHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQE-GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLG-FDENCKRVVDEV  118 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~  118 (149)
                      ++++||||+|.||..++++|++. |++|++++|+.   ....    .+.     ....+.++.+|+. +.+.+..++.  
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~---~~~~----~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~--   67 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQT---DRLG----DLV-----NHPRMHFFEGDITINKEWIEYHVK--   67 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcH---HHHH----Hhc-----cCCCeEEEeCCCCCCHHHHHHHHc--
Confidence            36999999999999999999986 68899988752   1111    111     1234778889998 5554433332  


Q ss_pred             HHhcCCccEEEeCCcCCCC
Q 044851          119 VNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~~  137 (149)
                           .+|+|||+|+...+
T Consensus        68 -----~~d~ViH~aa~~~~   81 (347)
T PRK11908         68 -----KCDVILPLVAIATP   81 (347)
T ss_pred             -----CCCEEEECcccCCh
Confidence                 48999999997543

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.59  E-value=1e-07  Score=81.68  Aligned_cols=105  Identities=16%  Similarity=0.222  Sum_probs=85.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      -.|.|+|+||-+|+|+++|.+|.++|++ ++++.|+..+...-...+..|..    .+.++.+-..|++..+..+.++++
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~----~GVqV~vsT~nitt~~ga~~Li~~ 1842 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRR----RGVQVQVSTSNITTAEGARGLIEE 1842 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHh----cCeEEEEecccchhhhhHHHHHHH
Confidence            4578999999999999999999999999 78888887666666667777776    666666666788888888888887


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      . .+.+.+.++||-|.+... .-+++++.++|
T Consensus      1843 s-~kl~~vGGiFnLA~VLRD-~LiEnQt~knF 1872 (2376)
T KOG1202|consen 1843 S-NKLGPVGGIFNLAAVLRD-GLIENQTPKNF 1872 (2376)
T ss_pred             h-hhcccccchhhHHHHHHh-hhhcccChhHH
Confidence            5 567889999999999876 67777776654

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=98.58  E-value=4e-07  Score=70.79  Aligned_cols=77  Identities=25%  Similarity=0.260  Sum_probs=57.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      ++++++|||++|.||.++++.|.+.|+.|++++|.....      .   ..    ......++.+|+.+.+.+..++.  
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~---~~----~~~~~~~~~~Dl~d~~~~~~~~~--   84 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------M---SE----DMFCHEFHLVDLRVMENCLKVTK--   84 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------c---cc----ccccceEEECCCCCHHHHHHHHh--
Confidence            567899999999999999999999999999998853210      0   00    11124567789998776655442  


Q ss_pred             HHhcCCccEEEeCCcCC
Q 044851          119 VNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~  135 (149)
                           .+|+|||+|+..
T Consensus        85 -----~~D~Vih~Aa~~   96 (370)
T PLN02695         85 -----GVDHVFNLAADM   96 (370)
T ss_pred             -----CCCEEEEccccc
Confidence                 479999999864

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=98.58  E-value=1.3e-07  Score=71.28  Aligned_cols=77  Identities=14%  Similarity=0.242  Sum_probs=51.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH--
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN--  120 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--  120 (149)
                      ++||||+|.||..++++|.+.|+.++++.++......   . .             .+..+|+.|..+...++..+.+  
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~---~-~-------------~~~~~~~~d~~~~~~~~~~~~~~~   64 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK---F-V-------------NLVDLDIADYMDKEDFLAQIMAGD   64 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH---H-H-------------hhhhhhhhhhhhHHHHHHHHhccc
Confidence            7999999999999999999999876666554322110   0 0             1123566665555555655542  


Q ss_pred             hcCCccEEEeCCcCCC
Q 044851          121 AYDRIDILVNNAAEQY  136 (149)
Q Consensus       121 ~~g~id~li~~ag~~~  136 (149)
                      .++++|+|||+||...
T Consensus        65 ~~~~~d~Vih~A~~~~   80 (308)
T PRK11150         65 DFGDIEAIFHEGACSS   80 (308)
T ss_pred             ccCCccEEEECceecC
Confidence            2357999999998643

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=98.55  E-value=4.8e-07  Score=75.23  Aligned_cols=80  Identities=11%  Similarity=0.113  Sum_probs=57.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHH-HHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQE-GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDEN-CKRVVD  116 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~  116 (149)
                      ++++++||||+|.||..++++|.++ |++|++++|....   ...    ..     ....+.++.+|+++... +..++ 
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~---~~~----~~-----~~~~~~~~~gDl~d~~~~l~~~l-  380 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDA---ISR----FL-----GHPRFHFVEGDISIHSEWIEYHI-  380 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchh---hhh----hc-----CCCceEEEeccccCcHHHHHHHh-
Confidence            4678999999999999999999986 7899999986321   111    11     12346788899998654 23322 


Q ss_pred             HHHHhcCCccEEEeCCcCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~  137 (149)
                            ..+|+|||+||...+
T Consensus       381 ------~~~D~ViHlAa~~~~  395 (660)
T PRK08125        381 ------KKCDVVLPLVAIATP  395 (660)
T ss_pred             ------cCCCEEEECccccCc
Confidence                  258999999997653

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.53  E-value=1.6e-08  Score=72.67  Aligned_cols=91  Identities=18%  Similarity=0.153  Sum_probs=62.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .++++|+||+|.|||..++..+...+-..+..+++....+ .+    .+..  . .+........|+++..-+.++++..
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~~----~L~v--~-~gd~~v~~~g~~~e~~~l~al~e~~   76 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-LE----GLKV--A-YGDDFVHVVGDITEEQLLGALREAP   76 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-cc----ceEE--E-ecCCcceechHHHHHHHHHHHHhhh
Confidence            5678999999999999999988887755433333211111 10    0000  0 1222333456888888888999999


Q ss_pred             HHhcCCccEEEeCCcCCCC
Q 044851          119 VNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~~  137 (149)
                      +.+.++.|++|||||...+
T Consensus        77 r~k~gkr~iiI~NAG~lgd   95 (253)
T KOG1204|consen   77 RKKGGKRDIIIHNAGSLGD   95 (253)
T ss_pred             hhcCCceeEEEecCCCccc
Confidence            9999999999999999876

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.52  E-value=2e-06  Score=60.99  Aligned_cols=83  Identities=22%  Similarity=0.281  Sum_probs=59.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++++++|+|+++++|+.+++.|++.|++|+++.|+   .+.+....+.+..     .....+..+|..+.+++...+.
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~---~~~~~~l~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~   96 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRD---LERAQKAADSLRA-----RFGEGVGAVETSDDAARAAAIK   96 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC---HHHHHHHHHHHHh-----hcCCcEEEeeCCCHHHHHHHHh
Confidence            4678899999999999999999999999999999987   3334444443432     1123355678888777655553


Q ss_pred             HHHHhcCCccEEEeCCcC
Q 044851          117 EVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~  134 (149)
                             ..|++|++...
T Consensus        97 -------~~diVi~at~~  107 (194)
T cd01078          97 -------GADVVFAAGAA  107 (194)
T ss_pred             -------cCCEEEECCCC
Confidence                   46888887654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK05865 hypothetical protein; Provisional

Probab=98.51  E-value=7.4e-07  Score=75.61  Aligned_cols=71  Identities=17%  Similarity=0.157  Sum_probs=57.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      +++|||+++.||..+++.|.++|++|++++|+...      .          ....+.++.+|+.+.+++..+++     
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~------~----------~~~~v~~v~gDL~D~~~l~~al~-----   60 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPD------S----------WPSSADFIAADIRDATAVESAMT-----   60 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchh------h----------cccCceEEEeeCCCHHHHHHHHh-----
Confidence            59999999999999999999999999999886211      0          11236788899999988777664     


Q ss_pred             cCCccEEEeCCcCC
Q 044851          122 YDRIDILVNNAAEQ  135 (149)
Q Consensus       122 ~g~id~li~~ag~~  135 (149)
                        .+|+|||+|+..
T Consensus        61 --~vD~VVHlAa~~   72 (854)
T PRK05865         61 --GADVVAHCAWVR   72 (854)
T ss_pred             --CCCEEEECCCcc
Confidence              479999999864

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.51  E-value=4.9e-07  Score=67.52  Aligned_cols=75  Identities=9%  Similarity=0.107  Sum_probs=55.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHhc
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAY  122 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  122 (149)
                      ++||||+|.+|..++++|.+.|++|.++.|++....                ...+..+.+|+.|.+++..+++.. +..
T Consensus         2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----------------~~~~~~~~~d~~d~~~l~~a~~~~-~~~   64 (285)
T TIGR03649         2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----------------GPNEKHVKFDWLDEDTWDNPFSSD-DGM   64 (285)
T ss_pred             EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----------------CCCCccccccCCCHHHHHHHHhcc-cCc
Confidence            899999999999999999999999999999854211                112345567888888887777543 222


Q ss_pred             CC-ccEEEeCCcC
Q 044851          123 DR-IDILVNNAAE  134 (149)
Q Consensus       123 g~-id~li~~ag~  134 (149)
                      .. +|.++++++.
T Consensus        65 ~g~~d~v~~~~~~   77 (285)
T TIGR03649        65 EPEISAVYLVAPP   77 (285)
T ss_pred             CCceeEEEEeCCC
Confidence            34 7888877664

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.51  E-value=1e-06  Score=65.86  Aligned_cols=89  Identities=25%  Similarity=0.188  Sum_probs=63.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCc--EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGAT--VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~--Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      +.+|||||.|.||.++++.+.+....  |+.++.-  .-.--.+.+..+.     ...++.+++.|+.|.+.+..++.+.
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkL--TYAgn~~~l~~~~-----~~~~~~fv~~DI~D~~~v~~~~~~~   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKL--TYAGNLENLADVE-----DSPRYRFVQGDICDRELVDRLFKEY   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecc--cccCCHHHHHhhh-----cCCCceEEeccccCHHHHHHHHHhc
Confidence            35899999999999999999988654  5555432  0110111222222     3457889999999999888888775


Q ss_pred             HHhcCCccEEEeCCcCCCCCCCC
Q 044851          119 VNAYDRIDILVNNAAEQYECGSV  141 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~~~~~~  141 (149)
                           ++|+++|.|+-++...++
T Consensus        74 -----~~D~VvhfAAESHVDRSI   91 (340)
T COG1088          74 -----QPDAVVHFAAESHVDRSI   91 (340)
T ss_pred             -----CCCeEEEechhccccccc
Confidence                 799999999987753333

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=98.50  E-value=4.7e-07  Score=67.45  Aligned_cols=61  Identities=30%  Similarity=0.395  Sum_probs=51.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHhc
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAY  122 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  122 (149)
                      ++|||++|.||..++++|.+.|++|+++.|+                            .+|+.+.+.+.+++...    
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------------------~~d~~~~~~~~~~~~~~----   49 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGRVVVALTSS----------------------------QLDLTDPEALERLLRAI----   49 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------------------ccCCCCHHHHHHHHHhC----
Confidence            7999999999999999999999999888763                            25888888877776653    


Q ss_pred             CCccEEEeCCcCCC
Q 044851          123 DRIDILVNNAAEQY  136 (149)
Q Consensus       123 g~id~li~~ag~~~  136 (149)
                       ++|++||++|...
T Consensus        50 -~~d~vi~~a~~~~   62 (287)
T TIGR01214        50 -RPDAVVNTAAYTD   62 (287)
T ss_pred             -CCCEEEECCcccc
Confidence             5899999998753

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02996 fatty acyl-CoA reductase

Probab=98.45  E-value=2.9e-06  Score=68.41  Aligned_cols=93  Identities=17%  Similarity=0.202  Sum_probs=59.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC---cEEEEecCCCChHHHHHHHHHH---------HhccCC-----CCCCceE
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGA---TVAFTYVKPQEDKDAKETLEML---------REAKTP-----DAKDPMA  100 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~---~Vi~~~~~~~~~~~~~~~~~~~---------~~~~~~-----~~~~~~~  100 (149)
                      +++|+++||||+|.||..++++|++.+.   +|+++.|........+....++         ....+.     ...++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            6889999999999999999999998653   4788888643222211111111         110000     0146788


Q ss_pred             EEecCCCh-------HHHHHHHHHHHHhcCCccEEEeCCcCCCC
Q 044851          101 ISADLGFD-------ENCKRVVDEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       101 ~~~Dv~~~-------~~v~~~~~~~~~~~g~id~li~~ag~~~~  137 (149)
                      +.+|++.+       +.++.+++       .+|+|||+|+....
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~  125 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF  125 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC
Confidence            99999843       22333322       48999999997653

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=98.41  E-value=4.6e-06  Score=66.30  Aligned_cols=85  Identities=16%  Similarity=0.065  Sum_probs=57.1

Q ss_pred             CCCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHH
Q 044851           32 YTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENC  111 (149)
Q Consensus        32 ~~~~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v  111 (149)
                      .+....-+.++++||||+|.||..++++|.+.|++|+++++.......   ....+.     ....+.++..|+.+..  
T Consensus       112 ~~~~~~~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~---~~~~~~-----~~~~~~~~~~Di~~~~--  181 (436)
T PLN02166        112 VPVGIGRKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKE---NLVHLF-----GNPRFELIRHDVVEPI--  181 (436)
T ss_pred             CCcccccCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHh---Hhhhhc-----cCCceEEEECcccccc--
Confidence            333334456789999999999999999999999999999875321111   111111     1124567777876542  


Q ss_pred             HHHHHHHHHhcCCccEEEeCCcCCC
Q 044851          112 KRVVDEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       112 ~~~~~~~~~~~g~id~li~~ag~~~  136 (149)
                         +       ..+|+|||+|+...
T Consensus       182 ---~-------~~~D~ViHlAa~~~  196 (436)
T PLN02166        182 ---L-------LEVDQIYHLACPAS  196 (436)
T ss_pred             ---c-------cCCCEEEECceecc
Confidence               1       25899999998754

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.41  E-value=1.4e-06  Score=65.46  Aligned_cols=75  Identities=20%  Similarity=0.112  Sum_probs=55.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHhc
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAY  122 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  122 (149)
                      +||||++|.||..++++|.+.|++|+.++|........             . ..+.++.+|+.+.+.+..+++..    
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------~-~~~~~~~~d~~~~~~~~~~~~~~----   64 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPL-------------L-SGVEFVVLDLTDRDLVDELAKGV----   64 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCcccccc-------------c-cccceeeecccchHHHHHHHhcC----
Confidence            89999999999999999999999999999864332111             1 23567888988874443333322    


Q ss_pred             CCccEEEeCCcCCCC
Q 044851          123 DRIDILVNNAAEQYE  137 (149)
Q Consensus       123 g~id~li~~ag~~~~  137 (149)
                       . |.+||+|+....
T Consensus        65 -~-d~vih~aa~~~~   77 (314)
T COG0451          65 -P-DAVIHLAAQSSV   77 (314)
T ss_pred             -C-CEEEEccccCch
Confidence             1 999999998764

>PLN02206 UDP-glucuronate decarboxylase

Probab=98.40  E-value=2.5e-06  Score=67.91  Aligned_cols=81  Identities=17%  Similarity=0.137  Sum_probs=55.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ...++++++||||+|.||..++++|.++|++|+++++......  ..... ..     ....+.++..|+.+..     +
T Consensus       115 ~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~--~~~~~-~~-----~~~~~~~i~~D~~~~~-----l  181 (442)
T PLN02206        115 LKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRK--ENVMH-HF-----SNPNFELIRHDVVEPI-----L  181 (442)
T ss_pred             cccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccch--hhhhh-hc-----cCCceEEEECCccChh-----h
Confidence            3456789999999999999999999999999998876532111  11111 00     1234567778886642     1


Q ss_pred             HHHHHhcCCccEEEeCCcCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~  136 (149)
                             ..+|+|||+|+...
T Consensus       182 -------~~~D~ViHlAa~~~  195 (442)
T PLN02206        182 -------LEVDQIYHLACPAS  195 (442)
T ss_pred             -------cCCCEEEEeeeecc
Confidence                   14899999998754

>PLN02503 fatty acyl-CoA reductase 2

Probab=98.39  E-value=3.6e-06  Score=69.23  Aligned_cols=97  Identities=13%  Similarity=0.213  Sum_probs=61.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC---cEEEEecCCCChHHHHHHHHHH---------HhccCC-----CCCCceE
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGA---TVAFTYVKPQEDKDAKETLEML---------REAKTP-----DAKDPMA  100 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~---~Vi~~~~~~~~~~~~~~~~~~~---------~~~~~~-----~~~~~~~  100 (149)
                      +++|+++||||+|.||..++++|++.+.   +|+++.|........+...+++         .+..+.     ...++.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            5799999999999999999999998764   4788888643322222221122         111010     1245778


Q ss_pred             EEecCCChHH-H-HHHHHHHHHhcCCccEEEeCCcCCCC
Q 044851          101 ISADLGFDEN-C-KRVVDEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       101 ~~~Dv~~~~~-v-~~~~~~~~~~~g~id~li~~ag~~~~  137 (149)
                      +..|++++.- + ....+.+.+   .+|+|||+|+....
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~---~vDiVIH~AA~v~f  232 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAK---EVDVIINSAANTTF  232 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHh---cCCEEEECcccccc
Confidence            9999998730 0 011222222   48999999998653

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=98.38  E-value=1e-06  Score=66.20  Aligned_cols=62  Identities=24%  Similarity=0.328  Sum_probs=47.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      ++||||++|-||.++.+.|.+.|+.|+.++|.                            .+|+.|.+.+.++++..   
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------------------~~dl~d~~~~~~~~~~~---   50 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS----------------------------DLDLTDPEAVAKLLEAF---   50 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------------------CS-TTSHHHHHHHHHHH---
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------------------hcCCCCHHHHHHHHHHh---
Confidence            59999999999999999999999888888663                            36899999888888877   


Q ss_pred             cCCccEEEeCCcCCC
Q 044851          122 YDRIDILVNNAAEQY  136 (149)
Q Consensus       122 ~g~id~li~~ag~~~  136 (149)
                        ++|+|||+||+..
T Consensus        51 --~pd~Vin~aa~~~   63 (286)
T PF04321_consen   51 --KPDVVINCAAYTN   63 (286)
T ss_dssp             ----SEEEE------
T ss_pred             --CCCeEeccceeec
Confidence              6899999999864

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=98.38  E-value=1.6e-06  Score=65.22  Aligned_cols=76  Identities=17%  Similarity=0.285  Sum_probs=51.9

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      +|||||+|.||..+++.|.+.|+ .|+++++.... ..    ...+.         ...+..|+.+.+.++.+.+.   .
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~-~~----~~~~~---------~~~~~~d~~~~~~~~~~~~~---~   63 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDG-HK----FLNLA---------DLVIADYIDKEDFLDRLEKG---A   63 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCc-hh----hhhhh---------heeeeccCcchhHHHHHHhh---c
Confidence            58999999999999999999998 58777765321 11    11111         12455677776655544442   2


Q ss_pred             cCCccEEEeCCcCC
Q 044851          122 YDRIDILVNNAAEQ  135 (149)
Q Consensus       122 ~g~id~li~~ag~~  135 (149)
                      +..+|+|||+|+..
T Consensus        64 ~~~~D~vvh~A~~~   77 (314)
T TIGR02197        64 FGKIEAIFHQGACS   77 (314)
T ss_pred             cCCCCEEEECcccc
Confidence            45799999999974

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.37  E-value=8.7e-06  Score=66.26  Aligned_cols=104  Identities=22%  Similarity=0.244  Sum_probs=80.5

Q ss_pred             CCCCCEEEEecCCC-hHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           37 KLRGMVALVTGGDS-GIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        37 ~~~~~~~litG~s~-gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ...++.+||||++. +|+.+++.+|+..|+.||++..+  -.++..+..+.++......+..+.++..++++..+|+.++
T Consensus       393 ~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~--~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlI  470 (866)
T COG4982         393 TYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSR--LSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALI  470 (866)
T ss_pred             CcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEccc--ccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHH
Confidence            35788999999875 59999999999999999988876  3455667777777655556777888999999999999999


Q ss_pred             HHHHHhcC--------------CccEEEeCCcCCCCCCCCCC
Q 044851          116 DEVVNAYD--------------RIDILVNNAAEQYECGSVED  143 (149)
Q Consensus       116 ~~~~~~~g--------------~id~li~~ag~~~~~~~~~~  143 (149)
                      +.+.....              .++.+|-.|+.... +.+.+
T Consensus       471 ewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~-G~l~~  511 (866)
T COG4982         471 EWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVS-GELAD  511 (866)
T ss_pred             HHhccccccccCCcceecccccCcceeeecccCCcc-Ccccc
Confidence            99865321              35778888777554 34443

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=98.37  E-value=2.9e-06  Score=62.43  Aligned_cols=94  Identities=12%  Similarity=0.125  Sum_probs=50.0

Q ss_pred             EecCCChHHHHHHHHHHHcCC--cEEEEecCCCChHHHHHHHHHHHhcc---C---CCCCCceEEEecCCChHH-H-HHH
Q 044851           45 VTGGDSGIGRAVCHCFAQEGA--TVAFTYVKPQEDKDAKETLEMLREAK---T---PDAKDPMAISADLGFDEN-C-KRV  114 (149)
Q Consensus        45 itG~s~gig~~~a~~L~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~Dv~~~~~-v-~~~  114 (149)
                      |||++|.||..+.++|++.+.  +|+++.|........+...+.+....   .   ....+++++.+|++++.- + ...
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  79999987432222222222211100   0   015678999999998651 1 122


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYECGSV  141 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~~~~~  141 (149)
                      ++.+.+   .+|+|||||+......+.
T Consensus        81 ~~~L~~---~v~~IiH~Aa~v~~~~~~  104 (249)
T PF07993_consen   81 YQELAE---EVDVIIHCAASVNFNAPY  104 (249)
T ss_dssp             HHHHHH---H--EEEE--SS-SBS-S-
T ss_pred             hhcccc---ccceeeecchhhhhcccc
Confidence            333322   479999999987654443

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.36  E-value=2.6e-06  Score=62.21  Aligned_cols=78  Identities=17%  Similarity=0.245  Sum_probs=49.6

Q ss_pred             CEEEEecCCCh-HHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           41 MVALVTGGDSG-IGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        41 ~~~litG~s~g-ig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      .+-.||+.++| +|.++|+.|+++|+.|+++++.....    .    .      ....+.++.++     +...+.+.+.
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~----~----~------~~~~v~~i~v~-----s~~~m~~~l~   76 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK----P----E------PHPNLSIIEIE-----NVDDLLETLE   76 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc----C----C------CCCCeEEEEEe-----cHHHHHHHHH
Confidence            35577776655 99999999999999999988652100    0    0      11233444432     2233344444


Q ss_pred             HhcCCccEEEeCCcCCCC
Q 044851          120 NAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~  137 (149)
                      +.++.+|+||||||+...
T Consensus        77 ~~~~~~DivIh~AAvsd~   94 (229)
T PRK06732         77 PLVKDHDVLIHSMAVSDY   94 (229)
T ss_pred             HHhcCCCEEEeCCccCCc
Confidence            445678999999999753

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.30  E-value=1e-05  Score=58.74  Aligned_cols=75  Identities=20%  Similarity=0.274  Sum_probs=55.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHhc
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAY  122 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  122 (149)
                      ++|+|++|.+|+.+++.|.+.+++|.++.|+.  ..   +..+.+..    .  .+.++..|+.+.+++.++++      
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~--~~---~~~~~l~~----~--g~~vv~~d~~~~~~l~~al~------   63 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDP--SS---DRAQQLQA----L--GAEVVEADYDDPESLVAALK------   63 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSS--HH---HHHHHHHH----T--TTEEEES-TT-HHHHHHHHT------
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEecc--ch---hhhhhhhc----c--cceEeecccCCHHHHHHHHc------
Confidence            68999999999999999999999999999974  11   22233332    2  34677999998887766665      


Q ss_pred             CCccEEEeCCcCC
Q 044851          123 DRIDILVNNAAEQ  135 (149)
Q Consensus       123 g~id~li~~ag~~  135 (149)
                       .+|.+|++.+..
T Consensus        64 -g~d~v~~~~~~~   75 (233)
T PF05368_consen   64 -GVDAVFSVTPPS   75 (233)
T ss_dssp             -TCSEEEEESSCS
T ss_pred             -CCceEEeecCcc
Confidence             579999888754

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.27  E-value=3.7e-06  Score=69.63  Aligned_cols=84  Identities=23%  Similarity=0.177  Sum_probs=56.6

Q ss_pred             EEEEecCCChHHHHHHHHHH--HcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHH--HHHHHHH
Q 044851           42 VALVTGGDSGIGRAVCHCFA--QEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDEN--CKRVVDE  117 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~--~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~--v~~~~~~  117 (149)
                      ++|||||+|.||..+++.|+  ..|+.|++++|+.. ...+......+      ....+.++.+|+++++.  ....+..
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~-~~~~~~~~~~~------~~~~v~~~~~Dl~~~~~~~~~~~~~~   74 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQS-LSRLEALAAYW------GADRVVPLVGDLTEPGLGLSEADIAE   74 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcch-HHHHHHHHHhc------CCCcEEEEecccCCccCCcCHHHHHH
Confidence            59999999999999999999  47889999998632 22222221111      11357788899998531  0112222


Q ss_pred             HHHhcCCccEEEeCCcCCC
Q 044851          118 VVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~  136 (149)
                      +    ..+|+|||+||...
T Consensus        75 l----~~~D~Vih~Aa~~~   89 (657)
T PRK07201         75 L----GDIDHVVHLAAIYD   89 (657)
T ss_pred             h----cCCCEEEECceeec
Confidence            2    36899999999754

>PLN02778 3,5-epimerase/4-reductase

Probab=98.25  E-value=6e-06  Score=62.42  Aligned_cols=30  Identities=17%  Similarity=0.276  Sum_probs=27.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEE
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFT   70 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~   70 (149)
                      +++|||||+|.||..+++.|.++|+.|++.
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~   39 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYG   39 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEe
Confidence            569999999999999999999999988643

>PRK12320 hypothetical protein; Provisional

Probab=98.25  E-value=6.2e-06  Score=68.76  Aligned_cols=70  Identities=20%  Similarity=0.206  Sum_probs=53.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      +++||||+|.||..++++|.+.|+.|+++++....       .         ....+.++.+|+.+.. +..++      
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~-------~---------~~~~ve~v~~Dl~d~~-l~~al------   58 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHD-------A---------LDPRVDYVCASLRNPV-LQELA------   58 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhh-------c---------ccCCceEEEccCCCHH-HHHHh------
Confidence            59999999999999999999999999999875211       0         1124678889999863 32222      


Q ss_pred             cCCccEEEeCCcCC
Q 044851          122 YDRIDILVNNAAEQ  135 (149)
Q Consensus       122 ~g~id~li~~ag~~  135 (149)
                       ..+|++||+++..
T Consensus        59 -~~~D~VIHLAa~~   71 (699)
T PRK12320         59 -GEADAVIHLAPVD   71 (699)
T ss_pred             -cCCCEEEEcCccC
Confidence             2589999999864

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=98.24  E-value=1.7e-06  Score=64.86  Aligned_cols=60  Identities=17%  Similarity=0.165  Sum_probs=48.7

Q ss_pred             EEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHhcC
Q 044851           44 LVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYD  123 (149)
Q Consensus        44 litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  123 (149)
                      |||||+|.||..+++.|.+.|+.|+++.+.                           ..+|+++.+++..++...     
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------------------~~~Dl~~~~~l~~~~~~~-----   48 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------------------KELDLTRQADVEAFFAKE-----   48 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------------------ccCCCCCHHHHHHHHhcc-----
Confidence            699999999999999999999887765321                           126999988887776663     


Q ss_pred             CccEEEeCCcCC
Q 044851          124 RIDILVNNAAEQ  135 (149)
Q Consensus       124 ~id~li~~ag~~  135 (149)
                      ++|+|||+|+..
T Consensus        49 ~~d~Vih~A~~~   60 (306)
T PLN02725         49 KPTYVILAAAKV   60 (306)
T ss_pred             CCCEEEEeeeee
Confidence            589999999874

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.22  E-value=1.2e-05  Score=62.07  Aligned_cols=98  Identities=14%  Similarity=0.112  Sum_probs=61.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc-CCcEEEEecCCCChHHHHHHHHHHHhc---cCCCCCCceEEEecCCChHH-HHH-H
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQE-GATVAFTYVKPQEDKDAKETLEMLREA---KTPDAKDPMAISADLGFDEN-CKR-V  114 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~Dv~~~~~-v~~-~  114 (149)
                      +++++|||+|.+|..++.+|+.+ .++|++..|....+.......+....-   ......++.++..|++.+.- +.. -
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            46999999999998888888876 468999998744333333333333200   01145678888899985431 111 1


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYECGSV  141 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~~~~~  141 (149)
                      +..+   ...+|.+|||++..+...+.
T Consensus        81 ~~~L---a~~vD~I~H~gA~Vn~v~pY  104 (382)
T COG3320          81 WQEL---AENVDLIIHNAALVNHVFPY  104 (382)
T ss_pred             HHHH---hhhcceEEecchhhcccCcH
Confidence            1111   12589999999987643343

>PRK09620 hypothetical protein; Provisional

Probab=98.22  E-value=5.2e-06  Score=60.62  Aligned_cols=36  Identities=28%  Similarity=0.470  Sum_probs=31.0

Q ss_pred             CCCCEEEEecCC----------------ChHHHHHHHHHHHcCCcEEEEecC
Q 044851           38 LRGMVALVTGGD----------------SGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s----------------~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      +.||.+|||+|.                |.+|.++|+.|...|+.|++++..
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~   52 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGY   52 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            468889999775                779999999999999999988753

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.20  E-value=5.1e-06  Score=61.93  Aligned_cols=94  Identities=23%  Similarity=0.169  Sum_probs=69.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      .|++||||-+|--|..+|+.|+..|+.|.-+.|+.......  .+ -+....-....++++..+|++|...+..+++.+ 
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~--ri-~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v-   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTP--RI-HLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV-   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcc--cc-eeccccccCCceeEEEeccccchHHHHHHHHhc-
Confidence            58899999999999999999999999999888874332211  00 111100012345778889999999999999988 


Q ss_pred             HhcCCccEEEeCCcCCCCCCCC
Q 044851          120 NAYDRIDILVNNAAEQYECGSV  141 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~~~~~  141 (149)
                          ++|-+.|.++.++...++
T Consensus        78 ----~PdEIYNLaAQS~V~vSF   95 (345)
T COG1089          78 ----QPDEIYNLAAQSHVGVSF   95 (345)
T ss_pred             ----Cchhheeccccccccccc
Confidence                789999999987753344

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.12  E-value=1.1e-05  Score=60.02  Aligned_cols=33  Identities=33%  Similarity=0.556  Sum_probs=30.7

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      +||||++|.||..+++.|++.|++|+++.|+..
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   33 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPP   33 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCC
Confidence            589999999999999999999999999999754

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=98.12  E-value=1e-05  Score=60.54  Aligned_cols=61  Identities=23%  Similarity=0.290  Sum_probs=53.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHhc
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAY  122 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  122 (149)
                      +||||++|-+|.++++.|. .+..|+.+++.                    .        +|++|.+.+..++.+.    
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~--------------------~--------~Ditd~~~v~~~i~~~----   49 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRA--------------------E--------LDITDPDAVLEVIRET----   49 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCc--------------------c--------ccccChHHHHHHHHhh----
Confidence            8999999999999999999 66788888764                    1        7999999999999987    


Q ss_pred             CCccEEEeCCcCCCC
Q 044851          123 DRIDILVNNAAEQYE  137 (149)
Q Consensus       123 g~id~li~~ag~~~~  137 (149)
                       ++|+|||+|++...
T Consensus        50 -~PDvVIn~AAyt~v   63 (281)
T COG1091          50 -RPDVVINAAAYTAV   63 (281)
T ss_pred             -CCCEEEECcccccc
Confidence             89999999999764

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.11  E-value=1.5e-05  Score=62.12  Aligned_cols=78  Identities=23%  Similarity=0.337  Sum_probs=59.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC-CcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEG-ATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +.+||.|+ |++|..+|..|+++| .+|++.+|+..   .+.+....       ...++.+..+|+.+.+.+.+++.+  
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~---~~~~i~~~-------~~~~v~~~~vD~~d~~al~~li~~--   68 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKE---KCARIAEL-------IGGKVEALQVDAADVDALVALIKD--   68 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHH---HHHHHHhh-------ccccceeEEecccChHHHHHHHhc--
Confidence            35889998 999999999999999 78999999732   22222211       233788999999999887777764  


Q ss_pred             HhcCCccEEEeCCcCCC
Q 044851          120 NAYDRIDILVNNAAEQY  136 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~  136 (149)
                           .|++||++....
T Consensus        69 -----~d~VIn~~p~~~   80 (389)
T COG1748          69 -----FDLVINAAPPFV   80 (389)
T ss_pred             -----CCEEEEeCCchh
Confidence                 399999987543

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.11  E-value=2.7e-05  Score=61.90  Aligned_cols=78  Identities=26%  Similarity=0.303  Sum_probs=56.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|.++|+|+++ +|.++|+.|++.|+.|++++++.  ...+.+..+++..    .  .+.++..|..+          
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~--~~~~~~~~~~l~~----~--~~~~~~~~~~~----------   63 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKE--EDQLKEALEELGE----L--GIELVLGEYPE----------   63 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCc--hHHHHHHHHHHHh----c--CCEEEeCCcch----------
Confidence            5789999999887 99999999999999999998863  2233444444432    2  24566677765          


Q ss_pred             HHHhcCCccEEEeCCcCCC
Q 044851          118 VVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~  136 (149)
                        +..+.+|+||+++|+..
T Consensus        64 --~~~~~~d~vv~~~g~~~   80 (450)
T PRK14106         64 --EFLEGVDLVVVSPGVPL   80 (450)
T ss_pred             --hHhhcCCEEEECCCCCC
Confidence              12346899999999743

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=98.09  E-value=4.4e-06  Score=61.02  Aligned_cols=60  Identities=27%  Similarity=0.165  Sum_probs=47.1

Q ss_pred             HHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHhcCCccEEEeCCcCC
Q 044851           56 VCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus        56 ~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~li~~ag~~  135 (149)
                      +|++|++.|++|++++|+...   ..     .          ..++.+|+++.++++++++++.   +++|+||||||+.
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~---~~-----~----------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~   59 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPG---MT-----L----------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVP   59 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcch---hh-----h----------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCC
Confidence            478999999999999987432   10     0          1356799999999999988873   6899999999975


Q ss_pred             C
Q 044851          136 Y  136 (149)
Q Consensus       136 ~  136 (149)
                      .
T Consensus        60 ~   60 (241)
T PRK12428         60 G   60 (241)
T ss_pred             C
Confidence            3

>PLN00016 RNA-binding protein; Provisional

Probab=98.05  E-value=1.2e-05  Score=62.71  Aligned_cols=38  Identities=18%  Similarity=0.256  Sum_probs=33.9

Q ss_pred             CCCCEEEEe----cCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           38 LRGMVALVT----GGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        38 ~~~~~~lit----G~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      ...+.++||    ||+|.||..+++.|++.|+.|+++.|+..
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~   91 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKE   91 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCc
Confidence            345679999    99999999999999999999999999753

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.00  E-value=1.4e-05  Score=62.48  Aligned_cols=76  Identities=22%  Similarity=0.301  Sum_probs=53.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC--cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      ++|.|+ |.+|..+++.|++.+.  +|++.+|+   .+.+.+..+.+      ....+.++.+|+.|.+++.++++.   
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~---~~~~~~~~~~~------~~~~~~~~~~d~~~~~~l~~~~~~---   67 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRN---PEKAERLAEKL------LGDRVEAVQVDVNDPESLAELLRG---   67 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESS---HHHHHHHHT--------TTTTEEEEE--TTTHHHHHHHHTT---
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECC---HHHHHHHHhhc------cccceeEEEEecCCHHHHHHHHhc---
Confidence            689999 9999999999999974  69999997   43443333222      245688899999999887776653   


Q ss_pred             hcCCccEEEeCCcCC
Q 044851          121 AYDRIDILVNNAAEQ  135 (149)
Q Consensus       121 ~~g~id~li~~ag~~  135 (149)
                          .|++||++|..
T Consensus        68 ----~dvVin~~gp~   78 (386)
T PF03435_consen   68 ----CDVVINCAGPF   78 (386)
T ss_dssp             ----SSEEEE-SSGG
T ss_pred             ----CCEEEECCccc
Confidence                49999999864

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.96  E-value=6.3e-05  Score=57.70  Aligned_cols=83  Identities=18%  Similarity=0.266  Sum_probs=65.0

Q ss_pred             EEEecCCChHHHHHHHHHHH----cCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           43 ALVTGGDSGIGRAVCHCFAQ----EGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~----~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      ++|-||++.-|.-+++++.+    .|.++-+.+|+   ..++++.++.+.+.....-....++.||.+|++++.++..+.
T Consensus         8 vVIyGASGfTG~yivee~v~~~~~~~~slavAGRn---~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~   84 (423)
T KOG2733|consen    8 VVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRN---EKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA   84 (423)
T ss_pred             EEEEccccccceeeHHHHhhhhcccCceEEEecCC---HHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh
Confidence            89999999999999999999    67788899997   566667776665542222233347889999999999988865


Q ss_pred             HHhcCCccEEEeCCcCC
Q 044851          119 VNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~  135 (149)
                             .+|+||+|-.
T Consensus        85 -------~vivN~vGPy   94 (423)
T KOG2733|consen   85 -------RVIVNCVGPY   94 (423)
T ss_pred             -------EEEEeccccc
Confidence                   8999999853

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=97.95  E-value=4.9e-05  Score=58.81  Aligned_cols=84  Identities=17%  Similarity=0.216  Sum_probs=58.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC--CcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEG--ATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +..+|+||||+|.+|.++++.|.+.+  ..|.+.+..+.......+....       ....+.++.+|+.+..++...+.
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~-------~~~~v~~~~~D~~~~~~i~~a~~   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF-------RSGRVTVILGDLLDANSISNAFQ   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc-------cCCceeEEecchhhhhhhhhhcc
Confidence            45689999999999999999999998  6688998875422211111100       24567788899998877666554


Q ss_pred             HHHHhcCCccEEEeCCcCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~  137 (149)
                             .. .+||+|+...+
T Consensus        76 -------~~-~Vvh~aa~~~~   88 (361)
T KOG1430|consen   76 -------GA-VVVHCAASPVP   88 (361)
T ss_pred             -------Cc-eEEEeccccCc
Confidence                   45 67777766443

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.92  E-value=0.00022  Score=47.81  Aligned_cols=78  Identities=26%  Similarity=0.306  Sum_probs=52.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      .+++++++|.|+ ||.|+++++.|...|+. |+++.|+   .+.+.+..+++.      +..+.+  +++.+..   .. 
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt---~~ra~~l~~~~~------~~~~~~--~~~~~~~---~~-   72 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRT---PERAEALAEEFG------GVNIEA--IPLEDLE---EA-   72 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESS---HHHHHHHHHHHT------GCSEEE--EEGGGHC---HH-
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECC---HHHHHHHHHHcC------ccccce--eeHHHHH---HH-
Confidence            478999999997 89999999999999998 9999997   444555544441      122223  3333222   11 


Q ss_pred             HHHHHhcCCccEEEeCCcCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~  136 (149)
                            ....|++|++.+...
T Consensus        73 ------~~~~DivI~aT~~~~   87 (135)
T PF01488_consen   73 ------LQEADIVINATPSGM   87 (135)
T ss_dssp             ------HHTESEEEE-SSTTS
T ss_pred             ------HhhCCeEEEecCCCC
Confidence                  225799999987643

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=97.86  E-value=6.3e-05  Score=59.87  Aligned_cols=97  Identities=16%  Similarity=0.238  Sum_probs=61.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC---cEEEEecCCCChHHHH---------HHHHHHHhccCCCCCCceEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGA---TVAFTYVKPQEDKDAK---------ETLEMLREAKTPDAKDPMAISADL  105 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~---~Vi~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~Dv  105 (149)
                      +++|+++||||+|.+|+-+..+|+..-.   +++++-|... ..+..         +.++.+.+..+..-.++..+.+|+
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~-g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi   88 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKK-GKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI   88 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCC-CCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence            6899999999999999999999998753   3667766533 22222         233333332222335677788888


Q ss_pred             CChHH-HH-HHHHHHHHhcCCccEEEeCCcCCCCC
Q 044851          106 GFDEN-CK-RVVDEVVNAYDRIDILVNNAAEQYEC  138 (149)
Q Consensus       106 ~~~~~-v~-~~~~~~~~~~g~id~li~~ag~~~~~  138 (149)
                      ++++- +. .-++.+   ...+|++||+|+...+.
T Consensus        89 ~~~~LGis~~D~~~l---~~eV~ivih~AAtvrFd  120 (467)
T KOG1221|consen   89 SEPDLGISESDLRTL---ADEVNIVIHSAATVRFD  120 (467)
T ss_pred             cCcccCCChHHHHHH---HhcCCEEEEeeeeeccc
Confidence            87552 11 111112   12689999999987653

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=97.86  E-value=0.00011  Score=54.14  Aligned_cols=73  Identities=18%  Similarity=0.122  Sum_probs=54.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      .++||||++.+|..++++|.+.|+.|.+..|++......             . ..+.+...|+.+..++...+.     
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~-------------~-~~v~~~~~d~~~~~~l~~a~~-----   62 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAAL-------------A-GGVEVVLGDLRDPKSLVAGAK-----   62 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhh-------------c-CCcEEEEeccCCHhHHHHHhc-----
Confidence            589999999999999999999999999999974322211             1 346677788888876655544     


Q ss_pred             cCCccEEEeCCcCC
Q 044851          122 YDRIDILVNNAAEQ  135 (149)
Q Consensus       122 ~g~id~li~~ag~~  135 (149)
                        .++.+++..+..
T Consensus        63 --G~~~~~~i~~~~   74 (275)
T COG0702          63 --GVDGVLLISGLL   74 (275)
T ss_pred             --cccEEEEEeccc
Confidence              456666666544

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=97.77  E-value=0.0001  Score=55.20  Aligned_cols=85  Identities=26%  Similarity=0.416  Sum_probs=65.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +.|-++-|.||++.+|+.++.+|++.|.+|++-+|.......   .++-+-     .-.++.+...|..|++++++++..
T Consensus        59 ~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r---~lkvmG-----dLGQvl~~~fd~~DedSIr~vvk~  130 (391)
T KOG2865|consen   59 VSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPR---HLKVMG-----DLGQVLFMKFDLRDEDSIRAVVKH  130 (391)
T ss_pred             ccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchh---heeecc-----cccceeeeccCCCCHHHHHHHHHh
Confidence            567788899999999999999999999999999986432211   111111     235688899999999999988875


Q ss_pred             HHHhcCCccEEEeCCcCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~  137 (149)
                      .       +++||..|--..
T Consensus       131 s-------NVVINLIGrd~e  143 (391)
T KOG2865|consen  131 S-------NVVINLIGRDYE  143 (391)
T ss_pred             C-------cEEEEeeccccc
Confidence            4       899999987554

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=97.75  E-value=4.9e-05  Score=56.50  Aligned_cols=34  Identities=32%  Similarity=0.520  Sum_probs=31.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCCC
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQE   76 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~   76 (149)
                      ++|||+++-||.+++.+|.+.|+.|+++.|++..
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~   34 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPK   34 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcc
Confidence            5899999999999999999999999999998543

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.73  E-value=0.00035  Score=49.41  Aligned_cols=79  Identities=22%  Similarity=0.217  Sum_probs=45.0

Q ss_pred             CCCCEEEEecC----------------CChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEE
Q 044851           38 LRGMVALVTGG----------------DSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI  101 (149)
Q Consensus        38 ~~~~~~litG~----------------s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (149)
                      ++||.+|||+|                ||-.|.++|+.+...|+.|+++.... ...               ....+  -
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~-~~~---------------~p~~~--~   62 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPS-SLP---------------PPPGV--K   62 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TT-S-------------------TTE--E
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCc-ccc---------------ccccc--e
Confidence            35777777754                35589999999999999999887652 110               11122  3


Q ss_pred             EecCCChHHHHHHHHHHHHhcCCccEEEeCCcCCCC
Q 044851          102 SADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       102 ~~Dv~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~  137 (149)
                      ..++.+.+++   ++.+.+.+..-|++|++|++...
T Consensus        63 ~i~v~sa~em---~~~~~~~~~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   63 VIRVESAEEM---LEAVKELLPSADIIIMAAAVSDF   95 (185)
T ss_dssp             EEE-SSHHHH---HHHHHHHGGGGSEEEE-SB--SE
T ss_pred             EEEecchhhh---hhhhccccCcceeEEEecchhhe
Confidence            3455554544   44444445556999999999764

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=97.73  E-value=0.00016  Score=60.42  Aligned_cols=61  Identities=15%  Similarity=0.141  Sum_probs=46.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      .+++||||++|.||.++++.|.+.|+.|...                               ..|++|.+.+..++... 
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~-------------------------------~~~l~d~~~v~~~i~~~-  427 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG-------------------------------KGRLEDRSSLLADIRNV-  427 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEee-------------------------------ccccccHHHHHHHHHhh-
Confidence            3469999999999999999999999776311                               12456666666666554 


Q ss_pred             HhcCCccEEEeCCcCCC
Q 044851          120 NAYDRIDILVNNAAEQY  136 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~  136 (149)
                          ++|+|||+|+...
T Consensus       428 ----~pd~Vih~Aa~~~  440 (668)
T PLN02260        428 ----KPTHVFNAAGVTG  440 (668)
T ss_pred             ----CCCEEEECCcccC
Confidence                6899999999864

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=97.70  E-value=0.00036  Score=62.49  Aligned_cols=95  Identities=12%  Similarity=0.093  Sum_probs=59.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC----CcEEEEecCCCChHHHHHHHHHHHhcc---CCCCCCceEEEecCCChHH-
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEG----ATVAFTYVKPQEDKDAKETLEMLREAK---TPDAKDPMAISADLGFDEN-  110 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g----~~Vi~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dv~~~~~-  110 (149)
                      ..++++|||++|.||..+++.|++.+    ..|+++.|...................   .....++.++.+|++++.- 
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            35789999999999999999999887    668888886443332222222111100   0011357788899986421 


Q ss_pred             -HHHHHHHHHHhcCCccEEEeCCcCCC
Q 044851          111 -CKRVVDEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       111 -v~~~~~~~~~~~g~id~li~~ag~~~  136 (149)
                       -...+.++.   ..+|++||||+...
T Consensus      1050 l~~~~~~~l~---~~~d~iiH~Aa~~~ 1073 (1389)
T TIGR03443      1050 LSDEKWSDLT---NEVDVIIHNGALVH 1073 (1389)
T ss_pred             cCHHHHHHHH---hcCCEEEECCcEec
Confidence             012223332   35899999998754

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.62  E-value=0.00036  Score=53.78  Aligned_cols=37  Identities=24%  Similarity=0.442  Sum_probs=31.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHc-CC-cEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQE-GA-TVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~-g~-~Vi~~~~~   73 (149)
                      .+.+|+++||||+|.||..++++|... |. +++++.|+
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~  190 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQ  190 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCC
Confidence            368899999999999999999999864 54 68888886

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=97.54  E-value=0.0003  Score=52.71  Aligned_cols=36  Identities=25%  Similarity=0.270  Sum_probs=32.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      ..+++++||||+|.||..++++|...|+.|++++.-
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~   60 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNY   60 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecc
Confidence            456789999999999999999999999889998764

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.39  E-value=0.0022  Score=43.49  Aligned_cols=35  Identities=31%  Similarity=0.501  Sum_probs=30.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC-CcEEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEG-ATVAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g-~~Vi~~~~~   73 (149)
                      +++++++|+|+ +++|..+++.|.+.| ..|++++|+
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~   52 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRT   52 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            45678999998 799999999999996 668888886

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK06849 hypothetical protein; Provisional

Probab=97.34  E-value=0.0035  Score=49.11  Aligned_cols=83  Identities=14%  Similarity=0.119  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      +.+++||||++.++|+.+++.|.+.|++|++++......   .....        .-.....+...-.+.+.....+.++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~---~~~s~--------~~d~~~~~p~p~~d~~~~~~~L~~i   71 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPL---SRFSR--------AVDGFYTIPSPRWDPDAYIQALLSI   71 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH---HHHHH--------hhhheEEeCCCCCCHHHHHHHHHHH
Confidence            347899999999999999999999999999998763211   11111        0111122211223344444444444


Q ss_pred             HHhcCCccEEEeCCc
Q 044851          119 VNAYDRIDILVNNAA  133 (149)
Q Consensus       119 ~~~~g~id~li~~ag  133 (149)
                      .++. ++|+||....
T Consensus        72 ~~~~-~id~vIP~~e   85 (389)
T PRK06849         72 VQRE-NIDLLIPTCE   85 (389)
T ss_pred             HHHc-CCCEEEECCh
Confidence            4444 4899998765

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.29  E-value=0.0016  Score=48.57  Aligned_cols=35  Identities=20%  Similarity=0.240  Sum_probs=31.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      ..+|.++|+|+ +|+|++++..|.+.|++|+++.|+
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~  149 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRT  149 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCC
Confidence            45788999998 699999999999999999999886

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.27  E-value=0.0016  Score=51.83  Aligned_cols=36  Identities=28%  Similarity=0.287  Sum_probs=32.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      +++|+++|+|+++ +|.+.|+.|++.|++|++.+++.
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~   38 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKP   38 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCC
Confidence            5688999999976 99999999999999999998764

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.25  E-value=0.0016  Score=45.86  Aligned_cols=72  Identities=8%  Similarity=0.024  Sum_probs=50.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      .+-|.|+++-.|..++++...+|+.|..+.|++.+...               ...+.+++.|+.|..++.+.+.     
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~---------------~~~~~i~q~Difd~~~~a~~l~-----   61 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAA---------------RQGVTILQKDIFDLTSLASDLA-----   61 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccc---------------cccceeecccccChhhhHhhhc-----
Confidence            37789999999999999999999999999998543321               1223456667777665433222     


Q ss_pred             cCCccEEEeCCcCC
Q 044851          122 YDRIDILVNNAAEQ  135 (149)
Q Consensus       122 ~g~id~li~~ag~~  135 (149)
                        ..|.||..-|..
T Consensus        62 --g~DaVIsA~~~~   73 (211)
T COG2910          62 --GHDAVISAFGAG   73 (211)
T ss_pred             --CCceEEEeccCC
Confidence              456666665554

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.10  E-value=0.0016  Score=46.54  Aligned_cols=36  Identities=22%  Similarity=0.373  Sum_probs=32.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++||+++|+|.+ .+|..+++.|.+.|++|++++++
T Consensus        25 ~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~   60 (200)
T cd01075          25 SLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADIN   60 (200)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCC
Confidence            5789999999985 89999999999999999988876

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.08  E-value=0.0044  Score=46.08  Aligned_cols=72  Identities=17%  Similarity=0.277  Sum_probs=48.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      .+||+||++- |..+++.|.+.|+.|+.+.++......+.             ......+..+..+.+++.+++.+.   
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~-------------~~g~~~v~~g~l~~~~l~~~l~~~---   64 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP-------------IHQALTVHTGALDPQELREFLKRH---   64 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc-------------ccCCceEEECCCCHHHHHHHHHhc---
Confidence            5899999987 99999999999999998888743221110             111223445666666655555443   


Q ss_pred             cCCccEEEeCC
Q 044851          122 YDRIDILVNNA  132 (149)
Q Consensus       122 ~g~id~li~~a  132 (149)
                        ++|.||..+
T Consensus        65 --~i~~VIDAt   73 (256)
T TIGR00715        65 --SIDILVDAT   73 (256)
T ss_pred             --CCCEEEEcC
Confidence              688888765

This enzyme was found to be a monomer by gel filtration.

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=97.07  E-value=0.0021  Score=48.70  Aligned_cols=100  Identities=15%  Similarity=0.208  Sum_probs=68.4

Q ss_pred             CCEEEEecC-CChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           40 GMVALVTGG-DSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        40 ~~~~litG~-s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      ..+|+|.|. ...+++.+|.-|-++|+-|+++..+..   +. +.   +..+   ....+..+..|..++.++...+.++
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~e---d~-~~---ve~e---~~~dI~~L~ld~~~~~~~~~~l~~f   72 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAE---DE-KY---VESE---DRPDIRPLWLDDSDPSSIHASLSRF   72 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHH---HH-HH---HHhc---cCCCCCCcccCCCCCcchHHHHHHH
Confidence            356888885 789999999999999999999988622   11 11   1111   2344667777888877777777777


Q ss_pred             HHhcC--------------CccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          119 VNAYD--------------RIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       119 ~~~~g--------------~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      .+.+.              ++..||..-....+.++++.++.+.|
T Consensus        73 ~~~L~~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~  117 (299)
T PF08643_consen   73 ASLLSRPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSW  117 (299)
T ss_pred             HHHhcCCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHH
Confidence            66553              34566666666555578888776543

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.02  E-value=0.0074  Score=46.35  Aligned_cols=34  Identities=32%  Similarity=0.405  Sum_probs=29.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      |.++||+||++|+|...++.....|+.++++..+
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s  176 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSS  176 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecC
Confidence            7899999999999999888888889776666554

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.94  E-value=0.0048  Score=46.45  Aligned_cols=80  Identities=24%  Similarity=0.264  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .+.+++|+|+++++|..+++.+...|++|+++.++.   .... .+.   .    .+..   ...|..+.+....+....
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~---~~~~-~~~---~----~~~~---~~~~~~~~~~~~~~~~~~  231 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSE---DKLE-RAK---E----LGAD---YVIDYRKEDFVREVRELT  231 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH---HHHH-HHH---H----cCCC---eEEecCChHHHHHHHHHh
Confidence            567899999999999999999999999998888752   2221 111   1    1111   123555544444444333


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                      ..  ..+|++|+++|.
T Consensus       232 ~~--~~~d~~i~~~g~  245 (342)
T cd08266         232 GK--RGVDVVVEHVGA  245 (342)
T ss_pred             CC--CCCcEEEECCcH
Confidence            21  358999998764

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.90  E-value=0.0056  Score=46.75  Aligned_cols=35  Identities=17%  Similarity=0.233  Sum_probs=31.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .|.+++|+|+++++|..+++.....|++|+.+.++
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~  185 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGS  185 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCC
Confidence            57899999999999999998888889998888775

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.90  E-value=0.014  Score=47.05  Aligned_cols=79  Identities=24%  Similarity=0.214  Sum_probs=52.9

Q ss_pred             CCCCCEEEEecCC----------------ChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceE
Q 044851           37 KLRGMVALVTGGD----------------SGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMA  100 (149)
Q Consensus        37 ~~~~~~~litG~s----------------~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (149)
                      .++||.+|||+|.                |-.|+++|+.+...|+.|+++.-... ..               ....+.+
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~---------------~p~~v~~  316 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA---------------DPQGVKV  316 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC---------------CCCCceE
Confidence            3799999999742                34899999999999999998864211 00               1122344


Q ss_pred             EEecCCChHHHHHHHHHHHHhcCCccEEEeCCcCCCC
Q 044851          101 ISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       101 ~~~Dv~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~  137 (149)
                      +  .+.+   .+++.+.+.+.+. .|++|.+|++...
T Consensus       317 i--~V~t---a~eM~~av~~~~~-~Di~I~aAAVaDy  347 (475)
T PRK13982        317 I--HVES---ARQMLAAVEAALP-ADIAIFAAAVADW  347 (475)
T ss_pred             E--EecC---HHHHHHHHHhhCC-CCEEEEeccccce
Confidence            3  3333   4445555555554 6999999998765

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.86  E-value=0.0091  Score=44.98  Aligned_cols=35  Identities=29%  Similarity=0.338  Sum_probs=31.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+++|+|+++++|..+++.+...|++|+++.++
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~  196 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRS  196 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCC
Confidence            46789999999999999999999999999888775

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=96.79  E-value=0.0051  Score=45.88  Aligned_cols=35  Identities=31%  Similarity=0.394  Sum_probs=32.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+++++|+|+++++|..+++.+...|+.|++++++
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~  178 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASS  178 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence            57899999999999999999999999999988875

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.79  E-value=0.011  Score=45.69  Aligned_cols=37  Identities=19%  Similarity=0.345  Sum_probs=31.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKP   74 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~   74 (149)
                      .++++.++|.|+ ||+|..+|+.|+..|. ++.+++++.
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            367788999987 7799999999999997 588898864

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=96.78  E-value=0.0035  Score=48.15  Aligned_cols=33  Identities=21%  Similarity=0.294  Sum_probs=28.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC-------CcEEEEecCC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEG-------ATVAFTYVKP   74 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g-------~~Vi~~~~~~   74 (149)
                      .++|||++|.+|..++..|+..+       ..|++++++.
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~   43 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPP   43 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCC
Confidence            48999999999999999999854       4799999864

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.78  E-value=0.022  Score=42.96  Aligned_cols=46  Identities=24%  Similarity=0.286  Sum_probs=35.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCCChHHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEML   87 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~~~~~~~~~~~~~   87 (149)
                      ..++.++|.|+ ||.|++++..|...|+ +|+++.|+.   ++.+...+.+
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~---~ka~~la~~l  171 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDP---ARAAALADEL  171 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCH---HHHHHHHHHH
Confidence            46678999987 6799999999999998 588999873   3444444444

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.75  E-value=0.0033  Score=47.19  Aligned_cols=36  Identities=28%  Similarity=0.398  Sum_probs=32.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcC-CcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEG-ATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g-~~Vi~~~~~   73 (149)
                      .+.++.++|+|+ ||+|+++++.|...| .+|+++.|+
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~  156 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRT  156 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            367889999997 899999999999999 679999997

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.75  E-value=0.005  Score=50.36  Aligned_cols=36  Identities=28%  Similarity=0.427  Sum_probs=32.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+++|+++|+|+ +|+|++++..|++.|++|+++.|+
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~  411 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRT  411 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCC
Confidence            367889999999 599999999999999999988886

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.73  E-value=0.014  Score=45.27  Aligned_cols=81  Identities=22%  Similarity=0.311  Sum_probs=50.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      -.|+.+||.||++|+|...++-....|+.++++.++...    .+..+++       +..   ...|..+++    ..++
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~----~~l~k~l-------GAd---~vvdy~~~~----~~e~  217 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEK----LELVKKL-------GAD---EVVDYKDEN----VVEL  217 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccch----HHHHHHc-------CCc---EeecCCCHH----HHHH
Confidence            367899999999999999888877788454444443221    2233322       221   225777743    3333


Q ss_pred             HHHh-cCCccEEEeCCcCCC
Q 044851          118 VVNA-YDRIDILVNNAAEQY  136 (149)
Q Consensus       118 ~~~~-~g~id~li~~ag~~~  136 (149)
                      +.+. .+.+|+|+-|+|-..
T Consensus       218 ~kk~~~~~~DvVlD~vg~~~  237 (347)
T KOG1198|consen  218 IKKYTGKGVDVVLDCVGGST  237 (347)
T ss_pred             HHhhcCCCccEEEECCCCCc
Confidence            3332 457999999999743

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=96.71  E-value=0.011  Score=43.79  Aligned_cols=94  Identities=17%  Similarity=0.129  Sum_probs=66.6

Q ss_pred             CCCC-CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhc-cCCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRG-MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREA-KTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~-~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .++. |++||||-++-=|..+++.|+..|+.|.-+.|+......  ..++-+... .+-.+......-.|++|...+.++
T Consensus        24 ~~r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT--~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~  101 (376)
T KOG1372|consen   24 AFRPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNT--ARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKL  101 (376)
T ss_pred             CcccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccch--hhhhhhhcCchhcccceeEEeeccccchHHHHHH
Confidence            3444 589999999999999999999999999977776443332  233333321 111234455566899999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~  137 (149)
                      +..+     +++-+.|.|+.++.
T Consensus       102 I~~i-----kPtEiYnLaAQSHV  119 (376)
T KOG1372|consen  102 ISTI-----KPTEVYNLAAQSHV  119 (376)
T ss_pred             Hhcc-----Cchhhhhhhhhcce
Confidence            9888     56777777776653

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.61  E-value=0.024  Score=43.00  Aligned_cols=35  Identities=17%  Similarity=0.199  Sum_probs=30.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .|.+++|+|+++++|...++.....|++|+.+.++
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s  172 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGS  172 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCC
Confidence            47789999999999999988888889998888775

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.60  E-value=0.012  Score=43.69  Aligned_cols=35  Identities=34%  Similarity=0.417  Sum_probs=31.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+++++|+|+++++|..+++.+...|+.|+++.++
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~  173 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGS  173 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCC
Confidence            56789999999999999999999999999888875

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.59  E-value=0.023  Score=44.50  Aligned_cols=35  Identities=20%  Similarity=0.242  Sum_probs=30.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      +.++.++|.|+ |.+|...++.+...|++|++++++
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~  199 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDIN  199 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECC
Confidence            34566888887 789999999999999999999886

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.58  E-value=0.015  Score=43.76  Aligned_cols=35  Identities=31%  Similarity=0.457  Sum_probs=30.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~   73 (149)
                      +.++.++|.|+ ||.+++++..|.+.|+. |+++.|+
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt  158 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRN  158 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            56788999976 88999999999999975 8899887

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=96.57  E-value=0.042  Score=38.26  Aligned_cols=78  Identities=18%  Similarity=0.279  Sum_probs=55.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      .+++|-|+.+.+|.++++.|-+.++-|.-++..+...                 ....+++..|-+=.+.-+.+++++-+
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~-----------------Ad~sI~V~~~~swtEQe~~v~~~vg~   66 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ-----------------ADSSILVDGNKSWTEQEQSVLEQVGS   66 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc-----------------ccceEEecCCcchhHHHHHHHHHHHH
Confidence            4699999999999999999999999888887753221                 11123444444445556677777765


Q ss_pred             hcC--CccEEEeCCcCC
Q 044851          121 AYD--RIDILVNNAAEQ  135 (149)
Q Consensus       121 ~~g--~id~li~~ag~~  135 (149)
                      .++  ++|.+|+.||.-
T Consensus        67 sL~gekvDav~CVAGGW   83 (236)
T KOG4022|consen   67 SLQGEKVDAVFCVAGGW   83 (236)
T ss_pred             hhcccccceEEEeeccc
Confidence            553  799999998753

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.55  E-value=0.015  Score=46.14  Aligned_cols=36  Identities=8%  Similarity=0.179  Sum_probs=31.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~   73 (149)
                      .+.++.++|.|+ |+.|..+++.|...|+. ++++.|+
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt  214 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRT  214 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCC
Confidence            367889999998 89999999999999965 8888886

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.53  E-value=0.022  Score=43.93  Aligned_cols=35  Identities=17%  Similarity=0.207  Sum_probs=30.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .|.+++|+|+++++|...++.....|++|+.+.++
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~  192 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS  192 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCC
Confidence            47899999999999999988888889998887765

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.47  E-value=0.028  Score=42.49  Aligned_cols=50  Identities=16%  Similarity=0.169  Sum_probs=35.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEML   87 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~   87 (149)
                      .+.+|+++|.|+ ||-+++++..|+..|+. |.++.|+....+++++..+.+
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~  171 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRV  171 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHh
Confidence            357789999997 45589999999999975 889998743223444444433

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=96.44  E-value=0.011  Score=43.31  Aligned_cols=63  Identities=22%  Similarity=0.232  Sum_probs=47.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCc---EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGAT---VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~---Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +.++|||+++=+|.++.+.+..+|..   .++.+.                            -.+|+++..+++++|++
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s----------------------------kd~DLt~~a~t~~lF~~   53 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS----------------------------KDADLTNLADTRALFES   53 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc----------------------------ccccccchHHHHHHHhc
Confidence            46999999999999999999998852   222221                            12688888889988887


Q ss_pred             HHHhcCCccEEEeCCcCCC
Q 044851          118 VVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~  136 (149)
                      .     ++..+|+.|+..+
T Consensus        54 e-----kPthVIhlAAmVG   67 (315)
T KOG1431|consen   54 E-----KPTHVIHLAAMVG   67 (315)
T ss_pred             c-----CCceeeehHhhhc
Confidence            6     6777888777654

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.44  E-value=0.053  Score=40.91  Aligned_cols=36  Identities=17%  Similarity=0.310  Sum_probs=30.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKP   74 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~   74 (149)
                      .++|+++|.|+ ||-+++++..|+..|+. |+++.|+.
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~  161 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDT  161 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCH
Confidence            45788999987 88899999999999975 88888863

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.43  E-value=0.021  Score=41.51  Aligned_cols=34  Identities=26%  Similarity=0.291  Sum_probs=30.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+++|+|+++ +|..+++.+...|.+|+++.++
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~  167 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRS  167 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCC
Confidence            567899999988 9999999888899999988876

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.40  E-value=0.021  Score=43.59  Aligned_cols=33  Identities=15%  Similarity=0.060  Sum_probs=29.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      .+++|+|+++++|...++.....|+ +|+.+.++
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s  189 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGS  189 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            7899999999999999887778898 68888765

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.40  E-value=0.028  Score=43.52  Aligned_cols=37  Identities=24%  Similarity=0.359  Sum_probs=31.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKP   74 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~   74 (149)
                      .++..+++|.|+ ||+|..+++.|+..|. ++.+++.+.
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            356778999988 7999999999999998 588998763

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=96.35  E-value=0.053  Score=42.89  Aligned_cols=38  Identities=21%  Similarity=0.317  Sum_probs=34.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      .+-..++|+||+|.+|+-+++.|.++|+.|.++.|+..
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~  114 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQ  114 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChh
Confidence            45568999999999999999999999999999999743

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.29  E-value=0.029  Score=42.34  Aligned_cols=37  Identities=24%  Similarity=0.372  Sum_probs=33.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++||.++|.|+++-.|+.++..|.+.|++|.++.++
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            5789999999999989999999999999998888874

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.27  E-value=0.033  Score=39.82  Aligned_cols=36  Identities=22%  Similarity=0.378  Sum_probs=30.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      .+.+++++|.| .+|+|..+++.|+..|. ++.+++.+
T Consensus        18 kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        18 RLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             HhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            36777899888 57999999999999997 58888876

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.25  E-value=0.02  Score=39.91  Aligned_cols=37  Identities=24%  Similarity=0.350  Sum_probs=33.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.++.++|.|++.-+|..+++.|.+.|++|.++.|+
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~   77 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSK   77 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECC
Confidence            4789999999997778999999999999999999886

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.20  E-value=0.011  Score=35.53  Aligned_cols=32  Identities=28%  Similarity=0.221  Sum_probs=20.8

Q ss_pred             CEEEEecCCChHHHHHHHHHH-HcCCcEEEEec
Q 044851           41 MVALVTGGDSGIGRAVCHCFA-QEGATVAFTYV   72 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~-~~g~~Vi~~~~   72 (149)
                      |.+||+|+|+|.|++-.-.++ ..|++.+-+..
T Consensus        40 K~VLViGaStGyGLAsRIa~aFg~gA~TiGV~f   72 (78)
T PF12242_consen   40 KKVLVIGASTGYGLASRIAAAFGAGADTIGVSF   72 (78)
T ss_dssp             SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE-
T ss_pred             ceEEEEecCCcccHHHHHHHHhcCCCCEEEEee
Confidence            789999999999998444444 55777776654

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.18  E-value=0.063  Score=40.68  Aligned_cols=92  Identities=21%  Similarity=0.306  Sum_probs=57.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHH-cCCcEE-EEecCCCChH-------HHHHHHHHHHhccCCCCCCceEEEecCCChHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQ-EGATVA-FTYVKPQEDK-------DAKETLEMLREAKTPDAKDPMAISADLGFDEN  110 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~-~g~~Vi-~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~  110 (149)
                      .|.+||.|+|+|.|++.--..+= .|+.-+ +..-++..+.       .-...+++..+.   .+--..-+..|.-+.+.
T Consensus        41 PKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~---kGlyAksingDaFS~e~  117 (398)
T COG3007          41 PKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQ---KGLYAKSINGDAFSDEM  117 (398)
T ss_pred             CceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHh---cCceeeecccchhhHHH
Confidence            47899999999887763322221 355544 3332222111       122233333331   23334456678888888


Q ss_pred             HHHHHHHHHHhcCCccEEEeCCcC
Q 044851          111 CKRVVDEVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       111 v~~~~~~~~~~~g~id~li~~ag~  134 (149)
                      -+.+++.++..+|++|.+|+.-+.
T Consensus       118 k~kvIe~Ik~~~g~vDlvvYSlAs  141 (398)
T COG3007         118 KQKVIEAIKQDFGKVDLVVYSLAS  141 (398)
T ss_pred             HHHHHHHHHHhhccccEEEEeccC
Confidence            889999999999999999987654

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.14  E-value=0.045  Score=42.85  Aligned_cols=35  Identities=20%  Similarity=0.327  Sum_probs=29.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~   73 (149)
                      +++++++|.|+ ||+|..+++.|+..|.. +++++.+
T Consensus       133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            56777888865 78999999999999985 8888876

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.12  E-value=0.034  Score=42.92  Aligned_cols=36  Identities=22%  Similarity=0.270  Sum_probs=31.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      .|++++|+|.+ |+|...++.....|++|+++++++.
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~  201 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEE  201 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChH
Confidence            48899999999 9998877777778999999999743

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.04  E-value=0.061  Score=41.23  Aligned_cols=34  Identities=24%  Similarity=0.335  Sum_probs=28.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~   73 (149)
                      .+++++|+|+ +++|...++-+...|+. |++++++
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~  203 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVS  203 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCC
Confidence            5788999986 89999999888888985 7788775

>PRK04148 hypothetical protein; Provisional

Probab=96.01  E-value=0.015  Score=38.93  Aligned_cols=34  Identities=12%  Similarity=0.057  Sum_probs=28.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      +++.+++.|.+  .|.++|..|.+.|+.|+.++.++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~   49 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINE   49 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCH
Confidence            45679999987  67788999999999999999973

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.99  E-value=0.043  Score=43.65  Aligned_cols=32  Identities=13%  Similarity=0.270  Sum_probs=28.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      .++|.|+ +.+|..+++.|.+.|..|+++++++
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~   33 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDE   33 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCH
Confidence            4788887 8999999999999999999999863

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.98  E-value=0.092  Score=33.63  Aligned_cols=55  Identities=25%  Similarity=0.317  Sum_probs=36.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHH
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENC  111 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v  111 (149)
                      ++|.|. +.+|+.+++.|.+.+..|++++.++   +..    +++..    .+  +.++.+|.++++.+
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~---~~~----~~~~~----~~--~~~i~gd~~~~~~l   55 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDP---ERV----EELRE----EG--VEVIYGDATDPEVL   55 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSH---HHH----HHHHH----TT--SEEEES-TTSHHHH
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCc---HHH----HHHHh----cc--cccccccchhhhHH
Confidence            467776 4799999999999777899999862   222    22222    22  56777888876643

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.98  E-value=0.055  Score=43.01  Aligned_cols=35  Identities=23%  Similarity=0.448  Sum_probs=31.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC-CcEEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEG-ATVAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g-~~Vi~~~~~   73 (149)
                      +.+++++|.|+ |.+|..+++.|...| .+|+++.|+
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs  213 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRT  213 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCC
Confidence            67889999997 899999999999999 568899886

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]

Probab=95.92  E-value=0.12  Score=39.85  Aligned_cols=95  Identities=18%  Similarity=0.296  Sum_probs=55.1

Q ss_pred             CCCCCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHH------HHHHHhccCCCCCCceEEEe
Q 044851           30 PDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKET------LEMLREAKTPDAKDPMAISA  103 (149)
Q Consensus        30 ~~~~~~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~  103 (149)
                      ..++....+.||++.|.|. |+||+.+|++|...|+.+....|.....+...+.      +.++.     ..+.+.++.|
T Consensus       152 ~~~~~g~~~~gK~vgilG~-G~IG~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~~~~~~d~~~~~-----~~sD~ivv~~  225 (336)
T KOG0069|consen  152 GGWPLGYDLEGKTVGILGL-GRIGKAIAKRLKPFGCVILYHSRTQLPPEEAYEYYAEFVDIEELL-----ANSDVIVVNC  225 (336)
T ss_pred             CCccccccccCCEEEEecC-cHHHHHHHHhhhhccceeeeecccCCchhhHHHhcccccCHHHHH-----hhCCEEEEec
Confidence            3445555689999999986 6799999999999995566666654333222111      11111     2345556666


Q ss_pred             cCCChHHHHHHHHH-HHHhcCCccEEEeCC
Q 044851          104 DLGFDENCKRVVDE-VVNAYDRIDILVNNA  132 (149)
Q Consensus       104 Dv~~~~~v~~~~~~-~~~~~g~id~li~~a  132 (149)
                      -++  .....++.+ +.+..++=-+|||+|
T Consensus       226 pLt--~~T~~liNk~~~~~mk~g~vlVN~a  253 (336)
T KOG0069|consen  226 PLT--KETRHLINKKFIEKMKDGAVLVNTA  253 (336)
T ss_pred             CCC--HHHHHHhhHHHHHhcCCCeEEEecc
Confidence            555  445556655 334433223455544

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.89  E-value=0.078  Score=40.02  Aligned_cols=39  Identities=26%  Similarity=0.447  Sum_probs=31.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCCCh
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQED   77 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~~~   77 (149)
                      ..++.++|.|+ ||-+++++..|++.|+ +|+++.|+..+.
T Consensus       124 ~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra  163 (283)
T COG0169         124 VTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERA  163 (283)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence            45788999986 6789999999999996 599999974433

>PLN00106 malate dehydrogenase

Probab=95.89  E-value=0.02  Score=44.02  Aligned_cols=35  Identities=17%  Similarity=0.292  Sum_probs=30.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC--cEEEEecCC
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVKP   74 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~~   74 (149)
                      .+.+.|+|++|.+|..++..|+..+.  .+++++.++
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~   54 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN   54 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC
Confidence            34699999999999999999997764  499999875

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.88  E-value=0.11  Score=37.87  Aligned_cols=35  Identities=26%  Similarity=0.447  Sum_probs=28.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEec
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYV   72 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~   72 (149)
                      .+.+++++|.| .+|+|..+++.|+..|.. +++++.
T Consensus        18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~   53 (228)
T cd00757          18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDD   53 (228)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            35677788888 579999999999999975 667744

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=95.87  E-value=0.056  Score=40.78  Aligned_cols=35  Identities=20%  Similarity=0.166  Sum_probs=31.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+++|.|+++++|..+++...+.|++|+.+.++
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~  179 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGS  179 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Confidence            46789999999999999999999999998888775

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.86  E-value=0.12  Score=39.30  Aligned_cols=36  Identities=25%  Similarity=0.288  Sum_probs=32.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+++++|.|. |++|+.++..|...|++|++++|+
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~  184 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARK  184 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECC
Confidence            357889999997 679999999999999999999987

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=95.84  E-value=0.044  Score=42.14  Aligned_cols=76  Identities=14%  Similarity=0.192  Sum_probs=52.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      ..++|-|+++..|..+|+.|+++|....+.+|+   ..++.....++       +.+.-.+.+.+  ++.++++.+    
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs---~~kl~~l~~~L-------G~~~~~~p~~~--p~~~~~~~~----   70 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRS---SAKLDALRASL-------GPEAAVFPLGV--PAALEAMAS----   70 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCC---HHHHHHHHHhc-------CccccccCCCC--HHHHHHHHh----
Confidence            358999999999999999999999998888997   44444443333       22333333333  555544444    


Q ss_pred             hcCCccEEEeCCcCC
Q 044851          121 AYDRIDILVNNAAEQ  135 (149)
Q Consensus       121 ~~g~id~li~~ag~~  135 (149)
                         +.++|+||+|-.
T Consensus        71 ---~~~VVlncvGPy   82 (382)
T COG3268          71 ---RTQVVLNCVGPY   82 (382)
T ss_pred             ---cceEEEeccccc
Confidence               569999999953

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.80  E-value=0.072  Score=41.09  Aligned_cols=37  Identities=27%  Similarity=0.395  Sum_probs=32.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      .+.|+++.|.|. |.||..+|+.|...|++|++++++.
T Consensus       143 ~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~  179 (330)
T PRK12480        143 PVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYP  179 (330)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCh
Confidence            578899988876 6699999999999999999999874

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.80  E-value=0.15  Score=39.34  Aligned_cols=38  Identities=18%  Similarity=0.157  Sum_probs=34.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      ..+.||++.|.|. |.||+.+|+.|...|++|+..++..
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~  183 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTR  183 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCC
Confidence            3588999999998 8899999999999999999888864

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=95.77  E-value=0.13  Score=38.81  Aligned_cols=35  Identities=20%  Similarity=0.217  Sum_probs=30.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .|.+++|+|+++++|..+++.....|+.|+.+.++
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s  177 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGS  177 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCC
Confidence            47889999999999999888888889998888765

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=95.77  E-value=0.066  Score=42.63  Aligned_cols=35  Identities=26%  Similarity=0.454  Sum_probs=30.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      +.+++++|.|+ |.+|..+++.|...|+ +|+++.|+
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~  215 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRT  215 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCC
Confidence            57788999987 8999999999999997 58888886

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.75  E-value=0.093  Score=38.71  Aligned_cols=36  Identities=28%  Similarity=0.435  Sum_probs=30.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~   73 (149)
                      .+++++++|.|+ ||+|..+++.|+..|.. +.+++.+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            467788999988 89999999999999975 7777654

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.73  E-value=0.11  Score=37.22  Aligned_cols=37  Identities=22%  Similarity=0.334  Sum_probs=31.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      .+.|+.++|.|| |.+|..-++.|++.|++|++++...
T Consensus         6 ~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~   42 (205)
T TIGR01470         6 NLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEEL   42 (205)
T ss_pred             EcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCC
Confidence            478899999986 5588899999999999999988753

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PLN00203 glutamyl-tRNA reductase

Probab=95.72  E-value=0.059  Score=44.07  Aligned_cols=35  Identities=14%  Similarity=0.282  Sum_probs=31.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      +.++.++|.|+ |.+|..+++.|...|+ +|+++.|+
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs  299 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRS  299 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            66789999999 8999999999999997 48888886

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=95.72  E-value=0.15  Score=37.96  Aligned_cols=35  Identities=34%  Similarity=0.385  Sum_probs=31.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+++++|+|+++++|..+++.....|++|+++.++
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~  173 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGS  173 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCC
Confidence            46789999999999999999999999999888775

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.70  E-value=0.013  Score=37.38  Aligned_cols=36  Identities=25%  Similarity=0.397  Sum_probs=30.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++++.++|.|+ |.+|..-++.|++.|++|+++...
T Consensus         4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~   39 (103)
T PF13241_consen    4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPE   39 (103)
T ss_dssp             --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESS
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCc
Confidence            478999999998 789999999999999999999876

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.69  E-value=0.021  Score=40.94  Aligned_cols=36  Identities=14%  Similarity=0.234  Sum_probs=32.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+++|.++|.|| |.+|...++.|.+.|++|+++.+.
T Consensus         7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~   42 (202)
T PRK06718          7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPE   42 (202)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Confidence            478999999998 789999999999999999988764

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.65  E-value=0.15  Score=37.94  Aligned_cols=35  Identities=31%  Similarity=0.308  Sum_probs=31.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+++++|+|+++++|..+++.+...|+.|+++.++
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~  178 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRT  178 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCC
Confidence            46789999999999999999999999999888775

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PTZ00325 malate dehydrogenase; Provisional

Probab=95.65  E-value=0.048  Score=41.93  Aligned_cols=35  Identities=17%  Similarity=0.297  Sum_probs=28.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC--CcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEG--ATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g--~~Vi~~~~~   73 (149)
                      +.+.+.|+|++|.+|..++..|+..+  ..++++++.
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~   43 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV   43 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC
Confidence            33479999999999999999999665  458899884

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=95.63  E-value=0.071  Score=40.57  Aligned_cols=34  Identities=9%  Similarity=0.344  Sum_probs=28.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--cEEEEecCCCC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVKPQE   76 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~~~~   76 (149)
                      .+.|.|+ |++|..++..|+..|.  .|++++++...
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~   37 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEK   37 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcch
Confidence            4788886 8999999999999984  69999997543

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.62  E-value=0.19  Score=33.64  Aligned_cols=30  Identities=20%  Similarity=0.432  Sum_probs=25.7

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCc-EEEEecC
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVK   73 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~   73 (149)
                      ++|.|+ +|+|..+++.|+..|.. +.+++.+
T Consensus         2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            678886 89999999999999985 8888655

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.60  E-value=0.21  Score=33.11  Aligned_cols=33  Identities=21%  Similarity=0.426  Sum_probs=25.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecC
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVK   73 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~   73 (149)
                      .++++|.|+ +++|..+++.|+..|.. +.+++.+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d   35 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDD   35 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCc
Confidence            356777765 78999999999999986 7788654

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.58  E-value=0.076  Score=35.86  Aligned_cols=37  Identities=30%  Similarity=0.349  Sum_probs=34.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++||.++|.|.+.-+|..++..|.++|+.|.++.++
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~   61 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWK   61 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCC
Confidence            5899999999999999999999999999999999865

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd00704 MDH Malate dehydrogenase

Probab=95.58  E-value=0.034  Score=42.71  Aligned_cols=33  Identities=21%  Similarity=0.307  Sum_probs=27.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-------cEEEEecCC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGA-------TVAFTYVKP   74 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~-------~Vi~~~~~~   74 (149)
                      .+.|+|++|.+|..++..|+..|.       .+++++++.
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~   41 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPP   41 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCC
Confidence            489999999999999999998652       388888864

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=95.57  E-value=0.027  Score=45.56  Aligned_cols=36  Identities=19%  Similarity=0.332  Sum_probs=31.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.++.++|+|+ +|+|++++..|.+.|++|++++|+
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~  364 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRT  364 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCC
Confidence            357789999996 699999999999999999888876

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.54  E-value=0.067  Score=40.82  Aligned_cols=35  Identities=23%  Similarity=0.439  Sum_probs=29.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      +.+++++|.|+ |.+|..+++.|...|+ +|++++|+
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~  211 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRT  211 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            56788999987 8899999999998775 58888886

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.53  E-value=0.2  Score=32.89  Aligned_cols=85  Identities=16%  Similarity=0.251  Sum_probs=54.8

Q ss_pred             EEEEecCCChHHHHHHHHHHH-cCCcEE-EEecCCC--ChHHHH-------------HHHHHHHhccCCCCCCceEEEec
Q 044851           42 VALVTGGDSGIGRAVCHCFAQ-EGATVA-FTYVKPQ--EDKDAK-------------ETLEMLREAKTPDAKDPMAISAD  104 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~-~g~~Vi-~~~~~~~--~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~D  104 (149)
                      ++.|.|++|-.|+.+++.+.+ .+..++ .++++..  ...+..             ..++++..     .  . -+..|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~-----~--~-DVvID   73 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLE-----E--A-DVVID   73 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTT-----H----SEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcc-----c--C-CEEEE
Confidence            488999999999999999999 577754 5566541  000000             11122211     1  1 15579


Q ss_pred             CCChHHHHHHHHHHHHhcCCccEEEeCCcCCC
Q 044851          105 LGFDENCKRVVDEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       105 v~~~~~v~~~~~~~~~~~g~id~li~~ag~~~  136 (149)
                      ++.++.+...++...++  ++.+++-+.|+..
T Consensus        74 fT~p~~~~~~~~~~~~~--g~~~ViGTTG~~~  103 (124)
T PF01113_consen   74 FTNPDAVYDNLEYALKH--GVPLVIGTTGFSD  103 (124)
T ss_dssp             ES-HHHHHHHHHHHHHH--T-EEEEE-SSSHH
T ss_pred             cCChHHhHHHHHHHHhC--CCCEEEECCCCCH
Confidence            99999999999988777  6889998888753

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=95.50  E-value=0.088  Score=38.33  Aligned_cols=75  Identities=20%  Similarity=0.321  Sum_probs=47.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      .++|.|+ |-+|..+|+.|.+.|++|+++++++   +.+.+...        .....+++.+|-++++-+.++      .
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~---~~~~~~~~--------~~~~~~~v~gd~t~~~~L~~a------g   63 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDE---ERVEEFLA--------DELDTHVVIGDATDEDVLEEA------G   63 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCH---HHHHHHhh--------hhcceEEEEecCCCHHHHHhc------C
Confidence            3566655 6699999999999999999999973   22222221        123456777888887643332      1


Q ss_pred             cCCccEEEeCCcC
Q 044851          122 YDRIDILVNNAAE  134 (149)
Q Consensus       122 ~g~id~li~~ag~  134 (149)
                      ....|.+|...|-
T Consensus        64 i~~aD~vva~t~~   76 (225)
T COG0569          64 IDDADAVVAATGN   76 (225)
T ss_pred             CCcCCEEEEeeCC
Confidence            1245666655543

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=95.50  E-value=0.25  Score=40.38  Aligned_cols=34  Identities=24%  Similarity=0.125  Sum_probs=28.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+++|+|+ |.+|...+......|+.|++++++
T Consensus       164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~  197 (509)
T PRK09424        164 PPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTR  197 (509)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4678999976 678989888888899999999986

>PRK06487 glycerate dehydrogenase; Provisional

Probab=95.48  E-value=0.094  Score=40.19  Aligned_cols=36  Identities=22%  Similarity=0.235  Sum_probs=32.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.||++.|.|. |.||+.+|+.+...|++|+..++.
T Consensus       145 ~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~  180 (317)
T PRK06487        145 ELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLP  180 (317)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence            589999999987 789999999999999999988765

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=95.47  E-value=0.036  Score=41.90  Aligned_cols=37  Identities=22%  Similarity=0.283  Sum_probs=33.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      .+.+++++|+|. |++|..+++.|...|++|+++.|+.
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~  184 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSS  184 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            578999999998 6699999999999999999999873

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=95.46  E-value=0.014  Score=43.99  Aligned_cols=84  Identities=17%  Similarity=0.167  Sum_probs=57.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC--CcEEEEecC-CCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEG--ATVAFTYVK-PQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g--~~Vi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +.++|||+.+.||...+..++..-  ++.+.++.- -...   ...++++.     ...+.+++..|+.+...+..++..
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~---~~~l~~~~-----n~p~ykfv~~di~~~~~~~~~~~~   78 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN---LKNLEPVR-----NSPNYKFVEGDIADADLVLYLFET   78 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc---cchhhhhc-----cCCCceEeeccccchHHHHhhhcc
Confidence            679999999999999999999884  344433321 0111   12222222     345688999999998877666654


Q ss_pred             HHHhcCCccEEEeCCcCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~  137 (149)
                           ..+|.|+|.|+..+.
T Consensus        79 -----~~id~vihfaa~t~v   93 (331)
T KOG0747|consen   79 -----EEIDTVIHFAAQTHV   93 (331)
T ss_pred             -----CchhhhhhhHhhhhh
Confidence                 279999999987653

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.46  E-value=0.33  Score=39.12  Aligned_cols=35  Identities=23%  Similarity=0.237  Sum_probs=30.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      ++++.++|.|+ |++|.++|+.|.+.|+.|.+++++
T Consensus        14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~   48 (480)
T PRK01438         14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDG   48 (480)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            56778999986 669999999999999999999865

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.43  E-value=0.21  Score=36.01  Aligned_cols=35  Identities=17%  Similarity=0.388  Sum_probs=30.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~   73 (149)
                      ++..+++|.|+ +|+|..+++.|+..|.. +++++.+
T Consensus        26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            56777999985 89999999999999986 8888776

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.42  E-value=0.21  Score=38.48  Aligned_cols=34  Identities=24%  Similarity=0.174  Sum_probs=29.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+++|+|+ +++|...++-+...|++|++++++
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~  205 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR  205 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence            5778999986 899999998888889999988874

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=95.41  E-value=0.13  Score=34.58  Aligned_cols=32  Identities=16%  Similarity=0.377  Sum_probs=28.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--cEEEEecC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVK   73 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~   73 (149)
                      .+.|+|++|.+|..++..|...+.  .+++++++
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~   35 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDIN   35 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESS
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccC
Confidence            478999999999999999999974  39999987

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=95.40  E-value=0.034  Score=39.21  Aligned_cols=82  Identities=12%  Similarity=0.098  Sum_probs=55.2

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCC--cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHH
Q 044851           35 SNKLRGMVALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCK  112 (149)
Q Consensus        35 ~~~~~~~~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  112 (149)
                      .+.+.++.++|.||++-.|..+.+.++..+-  .|+++.|+....++              ....+.....|++..+   
T Consensus        13 Df~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a--------------t~k~v~q~~vDf~Kl~---   75 (238)
T KOG4039|consen   13 DFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA--------------TDKVVAQVEVDFSKLS---   75 (238)
T ss_pred             HHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc--------------ccceeeeEEechHHHH---
Confidence            3456778899999999999999999999873  38888887432221              1223334445665433   


Q ss_pred             HHHHHHHHhcCCccEEEeCCcCCCC
Q 044851          113 RVVDEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       113 ~~~~~~~~~~g~id~li~~ag~~~~  137 (149)
                          +....+-.+|++|++-|....
T Consensus        76 ----~~a~~~qg~dV~FcaLgTTRg   96 (238)
T KOG4039|consen   76 ----QLATNEQGPDVLFCALGTTRG   96 (238)
T ss_pred             ----HHHhhhcCCceEEEeeccccc
Confidence                223333468999999887653

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.39  E-value=0.15  Score=39.75  Aligned_cols=37  Identities=19%  Similarity=0.255  Sum_probs=30.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKP   74 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~   74 (149)
                      .+++.+++|.|+ ||+|..+++.|+..|.. +.+++.+.
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            367788999987 79999999999999975 77887653

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.39  E-value=0.07  Score=40.32  Aligned_cols=37  Identities=27%  Similarity=0.385  Sum_probs=34.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++||.++|+|++.-+|+.++..|.+.|++|+++.++
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~  191 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSR  191 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            4789999999999999999999999999999988875

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.36  E-value=0.18  Score=34.96  Aligned_cols=37  Identities=27%  Similarity=0.460  Sum_probs=28.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      .+.||.++|.|- +.+|+.+|+.|...|++|+++..++
T Consensus        20 ~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DP   56 (162)
T PF00670_consen   20 MLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDP   56 (162)
T ss_dssp             --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSH
T ss_pred             eeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECCh
Confidence            478999999975 6799999999999999999999874

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PLN02928 oxidoreductase family protein

Probab=95.31  E-value=0.14  Score=39.74  Aligned_cols=36  Identities=19%  Similarity=0.220  Sum_probs=32.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.||++.|.|. |.||+.+|+.|...|++|+.++++
T Consensus       156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~  191 (347)
T PLN02928        156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRS  191 (347)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence            588999999987 789999999999999999998876

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.31  E-value=0.42  Score=36.61  Aligned_cols=38  Identities=11%  Similarity=0.073  Sum_probs=32.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      ..+.+|++.|.|. |.||+.+|+.|...|++|+.+++..
T Consensus       132 ~~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~  169 (312)
T PRK15469        132 YHREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSR  169 (312)
T ss_pred             CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            3578899988864 6799999999999999999988764

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=95.29  E-value=0.17  Score=38.64  Aligned_cols=67  Identities=22%  Similarity=0.279  Sum_probs=44.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHH-H-HHHHHHHHhccCCCCCCceEEEecCCCh
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKD-A-KETLEMLREAKTPDAKDPMAISADLGFD  108 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~  108 (149)
                      ..+.||++.|.|. |.||+.+|+.+...|++|+..++....... . ...++++.     ..+.+..+++-.+..
T Consensus       141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell-----~~sDvv~lh~Plt~~  209 (311)
T PRK08410        141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELL-----KTSDIISIHAPLNEK  209 (311)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHh-----hcCCEEEEeCCCCch
Confidence            3589999999987 789999999999999999998875321110 0 01122232     235566677766643

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.29  E-value=0.19  Score=44.37  Aligned_cols=78  Identities=22%  Similarity=0.312  Sum_probs=52.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-Cc-------------EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEec
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEG-AT-------------VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISAD  104 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g-~~-------------Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D  104 (149)
                      +.|.++|.|+ |.+|...++.|++.. +.             |.+.+++   ...++...+        ....+..+.+|
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~---~~~a~~la~--------~~~~~~~v~lD  635 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLY---LKDAKETVE--------GIENAEAVQLD  635 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCC---HHHHHHHHH--------hcCCCceEEee
Confidence            4567999997 889999999998763 33             6667765   222322222        11235678899


Q ss_pred             CCChHHHHHHHHHHHHhcCCccEEEeCCcCC
Q 044851          105 LGFDENCKRVVDEVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       105 v~~~~~v~~~~~~~~~~~g~id~li~~ag~~  135 (149)
                      ++|.+++.+++.       .+|+||++....
T Consensus       636 v~D~e~L~~~v~-------~~DaVIsalP~~  659 (1042)
T PLN02819        636 VSDSESLLKYVS-------QVDVVISLLPAS  659 (1042)
T ss_pred             cCCHHHHHHhhc-------CCCEEEECCCch
Confidence            999877655544       479999988753

>PRK05086 malate dehydrogenase; Provisional

Probab=95.25  E-value=0.11  Score=39.68  Aligned_cols=32  Identities=19%  Similarity=0.289  Sum_probs=25.5

Q ss_pred             EEEEecCCChHHHHHHHHHHH-cC--CcEEEEecC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQ-EG--ATVAFTYVK   73 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~-~g--~~Vi~~~~~   73 (149)
                      .++|.|+++++|.+++..|.. .+  ..+++++++
T Consensus         2 KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~   36 (312)
T PRK05086          2 KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIA   36 (312)
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecC
Confidence            589999999999999999865 23  347777776

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.24  E-value=0.27  Score=35.18  Aligned_cols=36  Identities=22%  Similarity=0.353  Sum_probs=30.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      .+..++++|.|+ ||+|..+|+.|++.|. ++++++.+
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            356778999988 7899999999999998 48898876

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.23  E-value=0.17  Score=40.20  Aligned_cols=35  Identities=23%  Similarity=0.394  Sum_probs=30.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      ..+.++|.|+ +.+|..+++.|.+.|..|+++++++
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~  264 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDP  264 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH
Confidence            4567999998 8899999999999999999998863

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=95.22  E-value=0.58  Score=36.13  Aligned_cols=92  Identities=15%  Similarity=0.119  Sum_probs=56.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHH------HHHHHHhccCCCCCCceEEEecCCChHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKE------TLEMLREAKTPDAKDPMAISADLGFDEN  110 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~  110 (149)
                      .+++|++-|.|- |.+|.++|+.|...|.+|++..+..........      .+.++.+     ...+..+.+  .+.+.
T Consensus        13 ~LkgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak-----~ADVV~llL--Pd~~t   84 (335)
T PRK13403         13 LLQGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVR-----TAQVVQMLL--PDEQQ   84 (335)
T ss_pred             hhCcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHh-----cCCEEEEeC--CChHH
Confidence            478999999986 779999999999999999888765322211111      1222221     234444433  34333


Q ss_pred             HHHHHH-HHHHhcCCccEEEeCCcCCCC
Q 044851          111 CKRVVD-EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       111 v~~~~~-~~~~~~g~id~li~~ag~~~~  137 (149)
                       ..++. .+.....+=.+|+...|++-.
T Consensus        85 -~~V~~~eil~~MK~GaiL~f~hgfni~  111 (335)
T PRK13403         85 -AHVYKAEVEENLREGQMLLFSHGFNIH  111 (335)
T ss_pred             -HHHHHHHHHhcCCCCCEEEECCCccee
Confidence             45553 455555444678888887553

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.18  E-value=0.26  Score=38.20  Aligned_cols=34  Identities=24%  Similarity=0.217  Sum_probs=28.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      .+.+++|+|+ +++|...++.....|+ +|++++++
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~  219 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDIN  219 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC
Confidence            4778999985 8999998888888898 68888775

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=95.17  E-value=0.067  Score=41.17  Aligned_cols=75  Identities=19%  Similarity=0.148  Sum_probs=46.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-------cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHH-HH-H
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGA-------TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDEN-CK-R  113 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~-------~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~-~  113 (149)
                      +.|+|++|.+|..++..|+..+.       .++++++++...                   .......|+.+... .. .
T Consensus         2 V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-------------------~a~g~~~Dl~d~~~~~~~~   62 (324)
T TIGR01758         2 VVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-------------------VLEGVVMELMDCAFPLLDG   62 (324)
T ss_pred             EEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-------------------ccceeEeehhcccchhcCc
Confidence            78999999999999999998653       388888853211                   01223344444331 00 0


Q ss_pred             HH--HHHHHhcCCccEEEeCCcCCC
Q 044851          114 VV--DEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       114 ~~--~~~~~~~g~id~li~~ag~~~  136 (149)
                      ..  ....+.+...|++|++||...
T Consensus        63 ~~~~~~~~~~~~~aDiVVitAG~~~   87 (324)
T TIGR01758        63 VVPTHDPAVAFTDVDVAILVGAFPR   87 (324)
T ss_pred             eeccCChHHHhCCCCEEEEcCCCCC
Confidence            00  022344567899999999854

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.16  E-value=0.089  Score=40.05  Aligned_cols=38  Identities=21%  Similarity=0.331  Sum_probs=35.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      .++||.+.|.|.++-+|+.++..|.+.|+.|.++.++.
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t  193 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRS  193 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCC
Confidence            57899999999999999999999999999999997763

>PLN02740 Alcohol dehydrogenase-like

Probab=95.13  E-value=0.15  Score=39.80  Aligned_cols=35  Identities=23%  Similarity=0.296  Sum_probs=29.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKP   74 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~   74 (149)
                      .|.+++|.|+ +++|...++.....|+ +|++++++.
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~  233 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINP  233 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCCh
Confidence            4778999985 8999999998888898 588887753

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.12  E-value=0.23  Score=37.82  Aligned_cols=34  Identities=21%  Similarity=0.082  Sum_probs=29.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~   73 (149)
                      .+.+++|+|+ +++|...++.+...|++ |++++++
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~  197 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPS  197 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4788999986 89999999988888999 8888765

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.11  E-value=0.098  Score=39.25  Aligned_cols=35  Identities=31%  Similarity=0.327  Sum_probs=31.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+++|+|+++++|..+++.....|++|+.+.++
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~  176 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGG  176 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            36789999999999999999988999999888775

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=95.11  E-value=0.43  Score=39.04  Aligned_cols=34  Identities=24%  Similarity=0.117  Sum_probs=29.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+++|.|+ |.+|...+..+...|+.|++++++
T Consensus       163 p~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~  196 (511)
T TIGR00561       163 PPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTR  196 (511)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4567999995 889999999999999999998886

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=95.07  E-value=0.46  Score=34.31  Aligned_cols=46  Identities=24%  Similarity=0.361  Sum_probs=35.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLE   85 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~   85 (149)
                      .++||.++|.|| |..|..-++.|++.|++|+++....  .+++..+++
T Consensus         9 ~l~~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~~~--~~el~~~~~   54 (210)
T COG1648           9 DLEGKKVLVVGG-GSVALRKARLLLKAGADVTVVSPEF--EPELKALIE   54 (210)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcCCc--cHHHHHHHH
Confidence            578999999986 4578889999999999999988764  445544443

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.04  E-value=0.27  Score=34.32  Aligned_cols=31  Identities=16%  Similarity=0.363  Sum_probs=26.4

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCc-EEEEecCC
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKP   74 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~   74 (149)
                      ++|.|+ +|+|..+++.|++.|.. +++++.+.
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            677775 89999999999999986 88988764

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.03  E-value=0.16  Score=38.27  Aligned_cols=35  Identities=26%  Similarity=0.269  Sum_probs=30.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+++|.|+++++|..+++.....|++|+.+.++
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~  173 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSS  173 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCc
Confidence            46789999999999999988888889998888775

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.02  E-value=0.1  Score=36.52  Aligned_cols=39  Identities=31%  Similarity=0.332  Sum_probs=33.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      ..+.|+++.|.|. |.||+.+|+.+...|++|+..++...
T Consensus        32 ~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~   70 (178)
T PF02826_consen   32 RELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPK   70 (178)
T ss_dssp             S-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCH
T ss_pred             cccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCC
Confidence            3578999999976 88999999999999999999999754

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=94.97  E-value=0.42  Score=36.69  Aligned_cols=34  Identities=24%  Similarity=0.421  Sum_probs=30.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+++|.|+ +++|...++.....|++|++++++
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~  199 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDID  199 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCC
Confidence            4788999999 999999998888889998888775

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=94.96  E-value=0.18  Score=37.56  Aligned_cols=35  Identities=34%  Similarity=0.363  Sum_probs=31.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+++|.|+++++|..+++.....|++|+.+..+
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~  176 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRS  176 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCC
Confidence            46799999999999999999998999998888765

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=94.93  E-value=0.078  Score=36.46  Aligned_cols=36  Identities=22%  Similarity=0.278  Sum_probs=30.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEec
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYV   72 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~   72 (149)
                      ..++|+.++|.|| |.+|...++.|.+.|++|.++..
T Consensus         9 l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719          9 FNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence            3578999999986 56899999999999999988854

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=94.92  E-value=0.11  Score=35.86  Aligned_cols=37  Identities=27%  Similarity=0.425  Sum_probs=30.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++||.++|.|.+.-+|+.++..|.++|+.|.++...
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~   69 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSK   69 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TT
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCC
Confidence            4899999999999999999999999999999988765

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=94.91  E-value=0.22  Score=39.31  Aligned_cols=35  Identities=17%  Similarity=0.169  Sum_probs=27.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC---cEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA---TVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~---~Vi~~~~~   73 (149)
                      .+.+++|.|+++++|...++.....|+   +|++++++
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~  212 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVN  212 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCC
Confidence            357899999999999998876666553   68888775

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=94.83  E-value=0.33  Score=37.63  Aligned_cols=34  Identities=24%  Similarity=0.221  Sum_probs=28.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      .+.+++|.|+ +++|...++.+...|+ .|++++++
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~  220 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDIN  220 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4788999975 8999999998888899 58888775

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=94.83  E-value=0.21  Score=37.49  Aligned_cols=35  Identities=17%  Similarity=0.206  Sum_probs=30.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+++|.|+++++|..+++.....|+.|+++..+
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~  173 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRR  173 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecC
Confidence            46789999999999999999888899998888765

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK07574 formate dehydrogenase; Provisional

Probab=94.81  E-value=0.28  Score=38.72  Aligned_cols=38  Identities=24%  Similarity=0.283  Sum_probs=33.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      ..+.|+++.|.|. |.||+.+|+.|...|++|+..+|..
T Consensus       188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~  225 (385)
T PRK07574        188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHR  225 (385)
T ss_pred             eecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCC
Confidence            3588999999987 6699999999999999999998864

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=94.80  E-value=0.08  Score=38.22  Aligned_cols=33  Identities=18%  Similarity=0.274  Sum_probs=29.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      ++.|+|+++.+|..++..|++.|++|++++|+.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~   34 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDL   34 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCH
Confidence            478999999999999999999999999988864

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PLN03139 formate dehydrogenase; Provisional

Probab=94.80  E-value=0.26  Score=38.90  Aligned_cols=38  Identities=16%  Similarity=0.187  Sum_probs=33.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      ..+.||++.|.|. |.||+.+|+.|...|++|+..++..
T Consensus       195 ~~L~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~  232 (386)
T PLN03139        195 YDLEGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLK  232 (386)
T ss_pred             cCCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCC
Confidence            4689999999994 7799999999999999998888763

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=94.79  E-value=0.68  Score=31.75  Aligned_cols=89  Identities=16%  Similarity=0.147  Sum_probs=50.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCC---CCCCceEEEecCCChHHHHHHHHH-
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTP---DAKDPMAISADLGFDENCKRVVDE-  117 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~-  117 (149)
                      ++-+.|. +..|..+|++|.+.|+.|.+++|++.   ..++..+.-.....+   --....++..-+.+.+.++.++.. 
T Consensus         3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~---~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~   78 (163)
T PF03446_consen    3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPE---KAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGE   78 (163)
T ss_dssp             EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHH---HHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCT
T ss_pred             EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchh---hhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhh
Confidence            3556665 68999999999999999999998732   222222110000000   001224555667777888888887 


Q ss_pred             -HHHhcCCccEEEeCCcC
Q 044851          118 -VVNAYDRIDILVNNAAE  134 (149)
Q Consensus       118 -~~~~~g~id~li~~ag~  134 (149)
                       +.....+=.++|.+...
T Consensus        79 ~i~~~l~~g~iiid~sT~   96 (163)
T PF03446_consen   79 NILAGLRPGKIIIDMSTI   96 (163)
T ss_dssp             THGGGS-TTEEEEE-SS-
T ss_pred             HHhhccccceEEEecCCc
Confidence             66655444566665544

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=94.79  E-value=0.21  Score=38.30  Aligned_cols=30  Identities=23%  Similarity=0.389  Sum_probs=25.4

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCc-EEEEecC
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVK   73 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~   73 (149)
                      ++|.|+ ||+|.++++.|+..|.. +.+++.+
T Consensus         2 VlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D   32 (312)
T cd01489           2 VLVVGA-GGIGCELLKNLVLTGFGEIHIIDLD   32 (312)
T ss_pred             EEEECC-CHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            677875 89999999999999976 7788754

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=94.79  E-value=0.24  Score=36.79  Aligned_cols=35  Identities=29%  Similarity=0.328  Sum_probs=31.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+++|+|+++++|..++..+...|+.|+.+.++
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~  173 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASS  173 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCC
Confidence            46789999999999999999999999998888775

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK06932 glycerate dehydrogenase; Provisional

Probab=94.78  E-value=0.25  Score=37.86  Aligned_cols=36  Identities=25%  Similarity=0.264  Sum_probs=32.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.||++.|.|. |.||+.+|+.+...|++|+..++.
T Consensus       144 ~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~  179 (314)
T PRK06932        144 DVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHK  179 (314)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCC
Confidence            588999999987 789999999999999999887764

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=94.77  E-value=0.33  Score=36.85  Aligned_cols=35  Identities=20%  Similarity=0.210  Sum_probs=30.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+++++|.|+++++|..+++.....|+.|+++..+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~  180 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRD  180 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcC
Confidence            57889999999999999999999999998877765

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=94.75  E-value=0.26  Score=37.79  Aligned_cols=36  Identities=8%  Similarity=0.284  Sum_probs=30.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC--cEEEEecCCC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVKPQ   75 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~~~   75 (149)
                      .++.+.|+|+ |.+|..++..|+..|.  .+++++++..
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~   42 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKE   42 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCc
Confidence            4567999998 9999999999998886  4889998643

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.73  E-value=0.17  Score=38.24  Aligned_cols=37  Identities=16%  Similarity=0.398  Sum_probs=33.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.||.++|.|.+.-+|+.++..|.++|+.|.++...
T Consensus       154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~  190 (285)
T PRK14191        154 EIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHIL  190 (285)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999999999999999999999887653

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=94.64  E-value=0.28  Score=38.40  Aligned_cols=73  Identities=12%  Similarity=0.130  Sum_probs=47.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      ..++++|+|++ .+|..+++.+.+.|+.|++++.++.... . ..    .         -.++..|..|.+.+.+++.+.
T Consensus        11 ~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~-~-~~----a---------d~~~~~~~~d~~~l~~~~~~~   74 (395)
T PRK09288         11 SATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPA-M-QV----A---------HRSHVIDMLDGDALRAVIERE   74 (395)
T ss_pred             CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCch-H-Hh----h---------hheEECCCCCHHHHHHHHHHh
Confidence            44689999875 5888999999999999998887643211 0 00    0         023456777776665555432


Q ss_pred             HHhcCCccEEEeCC
Q 044851          119 VNAYDRIDILVNNA  132 (149)
Q Consensus       119 ~~~~g~id~li~~a  132 (149)
                           .+|.++...
T Consensus        75 -----~id~vi~~~   83 (395)
T PRK09288         75 -----KPDYIVPEI   83 (395)
T ss_pred             -----CCCEEEEee
Confidence                 578777543

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=94.63  E-value=0.25  Score=37.15  Aligned_cols=35  Identities=29%  Similarity=0.458  Sum_probs=30.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+++|.|+++++|..+++.....|+.++++.++
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~  174 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSS  174 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence            46789999999999999999999999998777665

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.61  E-value=0.41  Score=36.86  Aligned_cols=84  Identities=17%  Similarity=0.146  Sum_probs=49.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .|.++||.|+ +.||..........|+. |++++..+.+.+.+    ++       -+.+.....-.-.+.+.+.+.+++
T Consensus       169 ~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~A----k~-------~Ga~~~~~~~~~~~~~~~~~~v~~  236 (354)
T KOG0024|consen  169 KGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELA----KK-------FGATVTDPSSHKSSPQELAELVEK  236 (354)
T ss_pred             cCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHH----HH-------hCCeEEeeccccccHHHHHHHHHh
Confidence            4667999986 67888888888888987 88888764332222    11       233322211122233444444444


Q ss_pred             HHHhcCCccEEEeCCcCC
Q 044851          118 VVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~  135 (149)
                      ..... .+|+.|.|.|..
T Consensus       237 ~~g~~-~~d~~~dCsG~~  253 (354)
T KOG0024|consen  237 ALGKK-QPDVTFDCSGAE  253 (354)
T ss_pred             hcccc-CCCeEEEccCch
Confidence            43322 489999999874

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.60  E-value=0.1  Score=39.64  Aligned_cols=37  Identities=24%  Similarity=0.389  Sum_probs=34.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEe-cC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTY-VK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~-~~   73 (149)
                      .++||.++|.|.++-+|..+|..|.+.|+.|.++. |+
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT  192 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRT  192 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCC
Confidence            47899999999999999999999999999999995 54

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=94.56  E-value=0.43  Score=36.91  Aligned_cols=34  Identities=21%  Similarity=0.240  Sum_probs=28.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      .+.+++|.|+ +++|...++.....|+ +|++++++
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~  221 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLN  221 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC
Confidence            4788999985 8999998888888898 68888775

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=94.46  E-value=0.26  Score=38.65  Aligned_cols=35  Identities=17%  Similarity=0.211  Sum_probs=30.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+++|+|+++++|..+++.+...|++++++.++
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~  223 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSS  223 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCC
Confidence            46789999999999999998888889998777654

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=94.45  E-value=0.27  Score=36.81  Aligned_cols=35  Identities=14%  Similarity=0.145  Sum_probs=31.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+++|.|+++++|..+++.....|+.|+++..+
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~  172 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRR  172 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecC
Confidence            46789999999999999999999999998888775

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=94.40  E-value=0.12  Score=36.21  Aligned_cols=40  Identities=25%  Similarity=0.423  Sum_probs=29.9

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHH
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKET   83 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~   83 (149)
                      +-|.|+ |-+|..+|..++..|++|++.++++...+...+.
T Consensus         2 V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~   41 (180)
T PF02737_consen    2 VAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKR   41 (180)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHH
T ss_pred             EEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhH
Confidence            567777 8899999999999999999999985544443333

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=94.39  E-value=0.35  Score=36.59  Aligned_cols=36  Identities=28%  Similarity=0.359  Sum_probs=31.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      .+.+++|.|+++.+|..+++.....|++|+.+.++.
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~  197 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSE  197 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCH
Confidence            467899999999999999999999999998887763

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=94.32  E-value=0.13  Score=36.62  Aligned_cols=36  Identities=25%  Similarity=0.353  Sum_probs=33.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEe
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTY   71 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~   71 (149)
                      ..++||.++|.|.|.-+|+.++.-|.++|+.|.+++
T Consensus        58 ~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~   93 (197)
T cd01079          58 NRLYGKTITIINRSEVVGRPLAALLANDGARVYSVD   93 (197)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEe
Confidence            468999999999999999999999999999999885

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK08655 prephenate dehydrogenase; Provisional

Probab=94.32  E-value=0.74  Score=36.92  Aligned_cols=33  Identities=24%  Similarity=0.435  Sum_probs=30.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      ++.|.||.|.+|.++++.|.+.|.+|++++|+.
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~   34 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDP   34 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence            488999999999999999999999999999874

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=94.32  E-value=0.39  Score=38.18  Aligned_cols=35  Identities=23%  Similarity=0.429  Sum_probs=29.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~   73 (149)
                      ++++.++|.|+ |-+|..+|+.|.++|.. |+++.|+
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT  211 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRT  211 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            78899999987 45888999999999965 7788886

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.28  E-value=0.3  Score=32.44  Aligned_cols=91  Identities=13%  Similarity=0.191  Sum_probs=48.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccC----CCCCCceEEEecCCChHHHHHHHHH
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKT----PDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      ++-|.|+ |-+|..+++.|.+.|+.|..++.+.  ....+.....+.....    ..-....++-+-+.| +.+..+.++
T Consensus        12 ~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs--~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpD-daI~~va~~   87 (127)
T PF10727_consen   12 KIGIIGA-GRVGTALARALARAGHEVVGVYSRS--PASAERAAAFIGAGAILDLEEILRDADLVFIAVPD-DAIAEVAEQ   87 (127)
T ss_dssp             EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCH--H-HHHHHHC--TT-----TTGGGCC-SEEEE-S-C-CHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCC--cccccccccccccccccccccccccCCEEEEEech-HHHHHHHHH
Confidence            5788887 6799999999999999987665431  1112222211111000    001223344445555 368888888


Q ss_pred             HHHh--cCCccEEEeCCcCCC
Q 044851          118 VVNA--YDRIDILVNNAAEQY  136 (149)
Q Consensus       118 ~~~~--~g~id~li~~ag~~~  136 (149)
                      +...  +.+=.++||+.|...
T Consensus        88 La~~~~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   88 LAQYGAWRPGQIVVHTSGALG  108 (127)
T ss_dssp             HHCC--S-TT-EEEES-SS--
T ss_pred             HHHhccCCCCcEEEECCCCCh
Confidence            8654  323358999999765

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=94.24  E-value=0.14  Score=40.95  Aligned_cols=38  Identities=29%  Similarity=0.427  Sum_probs=33.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      .+.|++++|.|. |.||..+++.+...|++|+++++++.
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~  246 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPI  246 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCch
Confidence            368999999997 68999999999999999999988753

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=94.22  E-value=0.25  Score=35.98  Aligned_cols=36  Identities=19%  Similarity=0.362  Sum_probs=31.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCc---EEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGAT---VAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~---Vi~~~~~   73 (149)
                      .+++++++|.|+ |+.|..+++.|...|..   |++++|+
T Consensus        22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            477889999998 88999999999999975   8899997

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK13886 conjugal transfer protein TraL; Provisional

Probab=94.22  E-value=0.63  Score=34.35  Aligned_cols=85  Identities=15%  Similarity=0.268  Sum_probs=48.5

Q ss_pred             CCEEEEecCCChHHHHH-----HHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAV-----CHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        40 ~~~~litG~s~gig~~~-----a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .+.++|.++-+|.|+..     +..|++.|.+|++++-++.... ..    .+...   ....+.+...|--+......+
T Consensus         2 ~~i~~i~~~KGGvGKSt~a~~la~~l~~~g~~vl~iD~D~~n~~-~~----~~~~l---~~~~~~i~~~~~i~~r~fD~L   73 (241)
T PRK13886          2 AKIHMVLQGKGGVGKSFIAATIAQYKASKGQKPLCIDTDPVNAT-FE----GYKAL---NVRRLNIMDGDEINTRNFDAL   73 (241)
T ss_pred             CeEEEEecCCCCCcHHHHHHHHHHHHHhCCCCEEEEECCCCCch-hh----hHHhc---CCcceecccCCccchhhHHHH
Confidence            35688888888887775     6778888999999988765421 11    12110   111222222222233345566


Q ss_pred             HHHHHHhcCCccEEEeCCcC
Q 044851          115 VDEVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~  134 (149)
                      ++.+...  ..|++|.|.+-
T Consensus        74 ve~i~~~--~~dvIIDngAs   91 (241)
T PRK13886         74 VEMIAST--EGDVIIDNGAS   91 (241)
T ss_pred             HHHHhcc--CCCEEEECCCc
Confidence            6665432  45778877763

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=94.19  E-value=0.82  Score=35.14  Aligned_cols=34  Identities=21%  Similarity=0.186  Sum_probs=28.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      .+.+++|+| .+++|..+++.....|+ +|+++.++
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~  211 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGS  211 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence            577899997 58999999988888899 78888764

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=94.19  E-value=0.29  Score=36.02  Aligned_cols=35  Identities=26%  Similarity=0.297  Sum_probs=30.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      .+.|+++|=.|+++|   .+++.|++.|++|..++-++
T Consensus        57 ~l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se   91 (243)
T COG2227          57 DLPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASE   91 (243)
T ss_pred             CCCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCCh
Confidence            378899999999998   58999999999999999864

>PLN02712 arogenate dehydrogenase

Probab=94.15  E-value=2.3  Score=36.04  Aligned_cols=33  Identities=15%  Similarity=0.186  Sum_probs=28.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+++.|.| .|.+|..+++.|.+.|.+|++++++
T Consensus        52 ~~kIgIIG-~G~mG~slA~~L~~~G~~V~~~dr~   84 (667)
T PLN02712         52 QLKIAIIG-FGNYGQFLAKTLISQGHTVLAHSRS   84 (667)
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            35688888 5889999999999999999888886

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=94.13  E-value=0.7  Score=36.27  Aligned_cols=35  Identities=26%  Similarity=0.430  Sum_probs=29.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      +++.+++|.|+ ||+|..+++.|+..|. ++++++.+
T Consensus        39 l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         39 LHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            56777888876 6899999999999996 48888765

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=94.12  E-value=0.36  Score=35.68  Aligned_cols=35  Identities=29%  Similarity=0.279  Sum_probs=30.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+++|.|+++++|..+++.....|+.|+++.++
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~  170 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSS  170 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCC
Confidence            56789999999999999999888889998888765

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=94.11  E-value=0.69  Score=35.84  Aligned_cols=34  Identities=21%  Similarity=0.160  Sum_probs=28.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+++++|.|+ +++|...++.....|++|++++.+
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~  216 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSS  216 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5778999765 899999988888889998877665

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=94.10  E-value=0.83  Score=34.73  Aligned_cols=34  Identities=29%  Similarity=0.436  Sum_probs=30.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      +.+++|+|+++++|..+++.....|++|+++.++
T Consensus       163 g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~  196 (350)
T cd08248         163 GKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST  196 (350)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc
Confidence            7899999999999999999888889998877653

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=94.09  E-value=0.49  Score=35.18  Aligned_cols=34  Identities=26%  Similarity=0.315  Sum_probs=28.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~   73 (149)
                      .+.+++|.|+ +++|...++.+...|+. |++++++
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~  154 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPS  154 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            5778999986 79999999888888997 7777654

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=94.07  E-value=0.35  Score=37.29  Aligned_cols=34  Identities=29%  Similarity=0.378  Sum_probs=28.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~   73 (149)
                      .+.+++|.|+ +++|...++.....|+. |++++++
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~  210 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDID  210 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC
Confidence            4788999985 89999998888888986 8888775

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.05  E-value=0.19  Score=37.94  Aligned_cols=37  Identities=35%  Similarity=0.478  Sum_probs=33.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.||.++|.|.+.-+|+.++..|.++|++|.++..+
T Consensus       155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~  191 (285)
T PRK14189        155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSK  191 (285)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCC
Confidence            4789999999999999999999999999999887654

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=94.05  E-value=0.43  Score=30.94  Aligned_cols=66  Identities=18%  Similarity=0.232  Sum_probs=40.6

Q ss_pred             hHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHhcC--CccEE
Q 044851           51 GIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYD--RIDIL  128 (149)
Q Consensus        51 gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~id~l  128 (149)
                      |||...++-....|++|++++++   ..+. +.+++       .+..   ..+|..+.+    +.+++.+..+  .+|++
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~---~~k~-~~~~~-------~Ga~---~~~~~~~~~----~~~~i~~~~~~~~~d~v   62 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRS---EEKL-ELAKE-------LGAD---HVIDYSDDD----FVEQIRELTGGRGVDVV   62 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESS---HHHH-HHHHH-------TTES---EEEETTTSS----HHHHHHHHTTTSSEEEE
T ss_pred             ChHHHHHHHHHHcCCEEEEEECC---HHHH-HHHHh-------hccc---ccccccccc----cccccccccccccceEE
Confidence            68888888888889999999986   2222 22222       2311   124555544    3344444333  59999


Q ss_pred             EeCCcC
Q 044851          129 VNNAAE  134 (149)
Q Consensus       129 i~~ag~  134 (149)
                      |.|+|.
T Consensus        63 id~~g~   68 (130)
T PF00107_consen   63 IDCVGS   68 (130)
T ss_dssp             EESSSS
T ss_pred             EEecCc
Confidence            999984

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=94.01  E-value=1.1  Score=34.48  Aligned_cols=42  Identities=26%  Similarity=0.280  Sum_probs=35.2

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           33 TPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        33 ~~~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      .....++||++-|.|. |.||+++|+++...|++|+..+|.+.
T Consensus       139 ~~~~~l~gktvGIiG~-GrIG~avA~r~~~Fgm~v~y~~~~~~  180 (324)
T COG1052         139 LLGFDLRGKTLGIIGL-GRIGQAVARRLKGFGMKVLYYDRSPN  180 (324)
T ss_pred             ccccCCCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCCC
Confidence            4445689999999974 67999999999988999999998753

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=93.98  E-value=0.15  Score=37.92  Aligned_cols=35  Identities=14%  Similarity=0.244  Sum_probs=29.0

Q ss_pred             EEEecCCChHHHHHHHHHHHcC----CcEEEEecCCCCh
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEG----ATVAFTYVKPQED   77 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g----~~Vi~~~~~~~~~   77 (149)
                      +.|+|++|.+|..++..|+..|    ..|++++.+....
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l   39 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKL   39 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccc
Confidence            3688998889999999999998    5799999875433

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=93.96  E-value=0.57  Score=36.07  Aligned_cols=37  Identities=11%  Similarity=0.101  Sum_probs=31.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHH-HcCCcEEEEecC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFA-QEGATVAFTYVK   73 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~-~~g~~Vi~~~~~   73 (149)
                      ..+.||++-|.|. |.||+.+|+.+. ..|.+|+..++.
T Consensus       141 ~~L~gktvGIiG~-G~IG~~va~~l~~~fgm~V~~~~~~  178 (323)
T PRK15409        141 TDVHHKTLGIVGM-GRIGMALAQRAHFGFNMPILYNARR  178 (323)
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHhcCCCEEEEECCC
Confidence            3589999999987 789999999997 789999877765

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=93.92  E-value=0.66  Score=36.23  Aligned_cols=34  Identities=21%  Similarity=0.144  Sum_probs=28.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+++|.|+ +++|...++.....|+.|++++.+
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~  211 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRS  211 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCC
Confidence            4778999876 899999998888889998888765

>PRK12767 carbamoyl phosphate synthase-like protein; Provisional

Probab=93.89  E-value=0.62  Score=35.39  Aligned_cols=31  Identities=13%  Similarity=0.105  Sum_probs=25.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CcEEEEecCC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEG--ATVAFTYVKP   74 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g--~~Vi~~~~~~   74 (149)
                      ++||||++.+.  .+++.|.+.|  .+|++++.++
T Consensus         3 ~vLv~g~~~~~--~~~~~l~~~~~g~~vi~~d~~~   35 (326)
T PRK12767          3 NILVTSAGRRV--QLVKALKKSLLKGRVIGADISE   35 (326)
T ss_pred             eEEEecCCccH--HHHHHHHHhccCCEEEEECCCC
Confidence            59999998777  8899999885  8899888763

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=93.84  E-value=0.57  Score=38.47  Aligned_cols=36  Identities=22%  Similarity=0.101  Sum_probs=32.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.||++.|.|. |.||+.+|+.|...|++|+..++.
T Consensus       137 ~l~gktvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~  172 (526)
T PRK13581        137 ELYGKTLGIIGL-GRIGSEVAKRAKAFGMKVIAYDPY  172 (526)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCC
Confidence            578999999987 569999999999999999999875

>PRK06436 glycerate dehydrogenase; Provisional

Probab=93.82  E-value=0.48  Score=36.17  Aligned_cols=38  Identities=21%  Similarity=0.084  Sum_probs=33.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      ..+.||++.|.|- |.||+.+|+.+...|++|+.++|+.
T Consensus       118 ~~L~gktvgIiG~-G~IG~~vA~~l~afG~~V~~~~r~~  155 (303)
T PRK06436        118 KLLYNKSLGILGY-GGIGRRVALLAKAFGMNIYAYTRSY  155 (303)
T ss_pred             CCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCC
Confidence            3589999999987 7799999998888899999998863

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.82  E-value=0.25  Score=37.32  Aligned_cols=37  Identities=24%  Similarity=0.295  Sum_probs=34.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++||.++|.|.+.-+|+.++..|...|+.|.++.+.
T Consensus       156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~  192 (285)
T PRK10792        156 DTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRF  192 (285)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECC
Confidence            4789999999999999999999999999999988775

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=93.79  E-value=0.26  Score=30.12  Aligned_cols=35  Identities=26%  Similarity=0.512  Sum_probs=29.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHc-CCcEEEEec
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQE-GATVAFTYV   72 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~-g~~Vi~~~~   72 (149)
                      .+.+++++|.|+ +..|..++..|.+. +..|.+++|
T Consensus        20 ~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          20 SLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            467889999999 99999999999999 455777766

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=93.79  E-value=0.38  Score=37.14  Aligned_cols=33  Identities=12%  Similarity=0.235  Sum_probs=26.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCc---EEEEecC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGAT---VAFTYVK   73 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~---Vi~~~~~   73 (149)
                      ..+.|.|++|.+|..+++.|.++++.   +..+.+.
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~   37 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASA   37 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEcc
Confidence            36899999999999999999997765   3555543

>PLN02827 Alcohol dehydrogenase-like

Probab=93.70  E-value=0.88  Score=35.52  Aligned_cols=34  Identities=18%  Similarity=0.273  Sum_probs=27.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~   73 (149)
                      .+.+++|.|+ +++|...++.....|+. |++++++
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~  227 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDIN  227 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence            4788999985 89999998888888986 6666654

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=93.68  E-value=0.22  Score=35.89  Aligned_cols=33  Identities=21%  Similarity=0.279  Sum_probs=28.0

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      .+..+|++.||..++++|++.|+.|++..|+..
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~   35 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGP   35 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCCh
Confidence            455678899999999999999999999877643

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=93.67  E-value=0.75  Score=35.66  Aligned_cols=34  Identities=24%  Similarity=0.258  Sum_probs=27.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      .+.+++|.|+ +++|...++.....|+ .|++++++
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~  225 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLN  225 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCC
Confidence            4678999985 8999998888888899 48888765

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.66  E-value=0.3  Score=37.01  Aligned_cols=37  Identities=27%  Similarity=0.398  Sum_probs=34.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++||.++|.|.|.-+|+.++.-|.++|+.|.++...
T Consensus       152 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~  188 (287)
T PRK14173        152 PLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSK  188 (287)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCC
Confidence            4789999999999999999999999999999888765

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.62  E-value=0.3  Score=36.91  Aligned_cols=37  Identities=27%  Similarity=0.424  Sum_probs=33.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++||.++|.|.|.-+|+.++.-|.++|+.|.++...
T Consensus       155 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~  191 (284)
T PRK14190        155 DISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSK  191 (284)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999999999999999999999988654

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=93.61  E-value=0.59  Score=35.49  Aligned_cols=35  Identities=20%  Similarity=0.254  Sum_probs=31.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+++|.|+++++|..+++.+.+.|++|+++.++
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~  199 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVG  199 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            46789999999999999999999999999988776

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=93.60  E-value=0.94  Score=35.55  Aligned_cols=35  Identities=17%  Similarity=0.260  Sum_probs=31.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      .+.+.|.||.|.+|.++|+.|.+.|+.|.+++++.
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~  132 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD  132 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence            35799999999999999999999999999999863

>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=93.59  E-value=0.75  Score=36.60  Aligned_cols=37  Identities=22%  Similarity=0.237  Sum_probs=33.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      ..+.||++-|.|. |.||+.+|+.+...|.+|+..++.
T Consensus       147 ~~L~gktvGIiG~-G~IG~~vA~~~~~fGm~V~~~d~~  183 (409)
T PRK11790        147 FEVRGKTLGIVGY-GHIGTQLSVLAESLGMRVYFYDIE  183 (409)
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCC
Confidence            4589999999987 789999999999999999998875

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=93.59  E-value=0.14  Score=37.82  Aligned_cols=77  Identities=21%  Similarity=0.227  Sum_probs=50.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQE-GAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~-g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +..++||||+-+-+|..+|..|-.. |.. |++.+.........        .    .+.   ++-.|+.|...+++++-
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~--------~----~GP---yIy~DILD~K~L~eIVV  107 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT--------D----VGP---YIYLDILDQKSLEEIVV  107 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc--------c----cCC---chhhhhhccccHHHhhc
Confidence            4457999999999999999988866 654 77776543222110        0    121   34468888777776654


Q ss_pred             HHHHhcCCccEEEeCCcCC
Q 044851          117 EVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~  135 (149)
                      .-     +||-|||..+..
T Consensus       108 n~-----RIdWL~HfSALL  121 (366)
T KOG2774|consen  108 NK-----RIDWLVHFSALL  121 (366)
T ss_pred             cc-----ccceeeeHHHHH
Confidence            32     678888776553

>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]

Probab=93.57  E-value=1.1  Score=32.95  Aligned_cols=85  Identities=22%  Similarity=0.368  Sum_probs=54.2

Q ss_pred             CCEEEEecCCChHHH-----HHHHHHHHcCCcEEEEecCCCChH-H----------------------HHHHHHHHHhcc
Q 044851           40 GMVALVTGGDSGIGR-----AVCHCFAQEGATVAFTYVKPQEDK-D----------------------AKETLEMLREAK   91 (149)
Q Consensus        40 ~~~~litG~s~gig~-----~~a~~L~~~g~~Vi~~~~~~~~~~-~----------------------~~~~~~~~~~~~   91 (149)
                      ++.++||.|-+|+|+     ++.-.|++.|..|++++.+-.... +                      +.+.+  ++.+ 
T Consensus         2 ~~iIVvTSGKGGVGKTTttAnig~aLA~~GkKv~liD~DiGLRNLDlimGlE~RiVYd~vdVi~g~~~l~QAL--IkDK-   78 (272)
T COG2894           2 ARIIVVTSGKGGVGKTTTTANIGTALAQLGKKVVLIDFDIGLRNLDLIMGLENRIVYDLVDVIEGEATLNQAL--IKDK-   78 (272)
T ss_pred             ceEEEEecCCCCcCccchhHHHHHHHHHcCCeEEEEecCcCchhhhhhhcccceeeeeehhhhcCccchhhHh--hccc-
Confidence            578999999999886     467789999999999876532111 0                      11111  1110 


Q ss_pred             CCCCCCceEEEe------cCCChHHHHHHHHHHHHhcCCccEEEeC
Q 044851           92 TPDAKDPMAISA------DLGFDENCKRVVDEVVNAYDRIDILVNN  131 (149)
Q Consensus        92 ~~~~~~~~~~~~------Dv~~~~~v~~~~~~~~~~~g~id~li~~  131 (149)
                        ...++..++.      |.-+++.++.+++++++  ..+|++|+-
T Consensus        79 --r~~nL~lLPAsQtrdKdalt~E~v~~vv~eL~~--~~fDyIi~D  120 (272)
T COG2894          79 --RLENLFLLPASQTRDKDALTPEGVKKVVNELKA--MDFDYIIID  120 (272)
T ss_pred             --cCCceEecccccccCcccCCHHHHHHHHHHHHh--cCCCEEEec
Confidence              1122333332      66678899999999986  468887764

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=93.57  E-value=1.5  Score=33.16  Aligned_cols=86  Identities=16%  Similarity=0.203  Sum_probs=48.7

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHH-------HHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKET-------LEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +-|.| .+.+|..+++.|.+.|++|++++|+....+.+.+.       .+++..    .-....++-+=+.+. .++.++
T Consensus         3 Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~----~~~~~dvIi~~vp~~-~~~~v~   76 (298)
T TIGR00872         3 LGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQ----RLSAPRVVWVMVPHG-IVDAVL   76 (298)
T ss_pred             EEEEc-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHh----hcCCCCEEEEEcCch-HHHHHH
Confidence            55666 47799999999999999999998874322222110       001110    000112222234444 677777


Q ss_pred             HHHHHhcCCccEEEeCCcC
Q 044851          116 DEVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~  134 (149)
                      +++.....+=+++|++...
T Consensus        77 ~~l~~~l~~g~ivid~st~   95 (298)
T TIGR00872        77 EELAPTLEKGDIVIDGGNS   95 (298)
T ss_pred             HHHHhhCCCCCEEEECCCC
Confidence            7776655333677776554

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=93.56  E-value=0.64  Score=35.17  Aligned_cols=33  Identities=18%  Similarity=0.249  Sum_probs=26.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+++++|+++++|...++.....|++|+++.++
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~  177 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRR  177 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCC
Confidence            444445999999999888777779998888775

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK08328 hypothetical protein; Provisional

Probab=93.55  E-value=0.63  Score=34.00  Aligned_cols=35  Identities=23%  Similarity=0.348  Sum_probs=28.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~   73 (149)
                      +++.+++|.|+ ||+|..+++.|+..|.. +++++.+
T Consensus        25 L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         25 LKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            56677888876 58999999999999976 7788755

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=93.55  E-value=0.91  Score=34.52  Aligned_cols=35  Identities=31%  Similarity=0.420  Sum_probs=30.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+++|.|+++++|..++......|++|+++..+
T Consensus       177 ~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~  211 (350)
T cd08274         177 AGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGA  211 (350)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCc
Confidence            47799999999999999999888899998877653

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=93.53  E-value=0.64  Score=36.61  Aligned_cols=67  Identities=16%  Similarity=0.152  Sum_probs=45.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHH--HHHHHHHHhccCCCCCCceEEEecCCCh
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA--KETLEMLREAKTPDAKDPMAISADLGFD  108 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~  108 (149)
                      ..+.||++-|.|. |.||..+|+.|...|.+|+.+++........  ...++++.     ....+..+++-++..
T Consensus       112 ~~L~gktvGIIG~-G~IG~~vA~~l~a~G~~V~~~dp~~~~~~~~~~~~~L~ell-----~~sDiI~lh~PLt~~  180 (378)
T PRK15438        112 FSLHDRTVGIVGV-GNVGRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELV-----QEADILTFHTPLFKD  180 (378)
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCcccccccccccCCHHHHH-----hhCCEEEEeCCCCCC
Confidence            3578999999987 7899999999999999999987532211100  01223332     235667777777653

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.51  E-value=0.27  Score=37.14  Aligned_cols=36  Identities=28%  Similarity=0.430  Sum_probs=33.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEec
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYV   72 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~   72 (149)
                      .++||.+.|.|.|+-+|+.++..|.++|++|.++..
T Consensus       155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s  190 (284)
T PRK14179        155 ELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHS  190 (284)
T ss_pred             CCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECC
Confidence            478999999999999999999999999999998843

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.49  E-value=0.3  Score=36.97  Aligned_cols=37  Identities=22%  Similarity=0.358  Sum_probs=34.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++||.++|.|.+.-+|+.++..|.++|+.|.++...
T Consensus       161 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~  197 (287)
T PRK14176        161 DIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVF  197 (287)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEecc
Confidence            4789999999999999999999999999999988764

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=93.48  E-value=0.28  Score=39.05  Aligned_cols=37  Identities=32%  Similarity=0.537  Sum_probs=32.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      +.|++++|.|++ .||+.+++.+...|++|+++++++.
T Consensus       200 l~GktVvViG~G-~IG~~va~~ak~~Ga~ViV~d~d~~  236 (413)
T cd00401         200 IAGKVAVVAGYG-DVGKGCAQSLRGQGARVIVTEVDPI  236 (413)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECChh
Confidence            578999999875 7999999999999999999888744

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.47  E-value=0.33  Score=36.71  Aligned_cols=37  Identities=24%  Similarity=0.357  Sum_probs=34.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.||.++|.|.|.-+|+.++.-|.++|+.|.++...
T Consensus       156 ~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~  192 (284)
T PRK14177        156 DVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSK  192 (284)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC
Confidence            5789999999999999999999999999999988765

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=93.45  E-value=0.55  Score=36.32  Aligned_cols=34  Identities=18%  Similarity=0.145  Sum_probs=28.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      .+.+++|.| .+++|...++.....|+ +|++++++
T Consensus       184 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~  218 (365)
T cd08277         184 PGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDIN  218 (365)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            477899997 48999999888778898 58888775

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=93.43  E-value=1.2  Score=33.93  Aligned_cols=33  Identities=30%  Similarity=0.397  Sum_probs=28.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      .+.|+| .|-+|.++|..|++.|++|+++++++.
T Consensus         4 ~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~   36 (308)
T PRK06129          4 SVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPA   36 (308)
T ss_pred             EEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHH
Confidence            478888 677999999999999999999999743

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=93.42  E-value=1.5  Score=32.89  Aligned_cols=35  Identities=17%  Similarity=0.316  Sum_probs=28.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      +++..++|.|+ ||+|..+|+.|+..|. ++.+++.+
T Consensus        28 L~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         28 FADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             hcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            56677888865 6899999999999994 58888755

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.36  E-value=0.32  Score=36.68  Aligned_cols=37  Identities=27%  Similarity=0.410  Sum_probs=34.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++||.++|.|.|.-+|+.++.-|.++|+.|.++..+
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~  191 (278)
T PRK14172        155 DIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSK  191 (278)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC
Confidence            5799999999999999999999999999999988764

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.36  E-value=0.32  Score=36.74  Aligned_cols=37  Identities=19%  Similarity=0.306  Sum_probs=33.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++||.++|.|.|.-+|+.++..|.++|+.|.++...
T Consensus       154 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~  190 (281)
T PRK14183        154 DVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIF  190 (281)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC
Confidence            5789999999999999999999999999999877543

>PLN02494 adenosylhomocysteinase

Probab=93.35  E-value=0.27  Score=39.77  Aligned_cols=37  Identities=27%  Similarity=0.497  Sum_probs=32.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      +.|++++|.|.+ .||+.+|+.+...|++|+++.+++.
T Consensus       252 LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~  288 (477)
T PLN02494        252 IAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPI  288 (477)
T ss_pred             cCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCch
Confidence            578999999876 8999999999999999999988753

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=93.35  E-value=0.21  Score=37.54  Aligned_cols=34  Identities=21%  Similarity=0.354  Sum_probs=29.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCC
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKP   74 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~   74 (149)
                      ++.++|.|+ ||-+++++..|.+.|+. |.++.|+.
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~  156 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNE  156 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence            457888886 88999999999999986 99999973

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.32  E-value=0.36  Score=36.48  Aligned_cols=37  Identities=27%  Similarity=0.316  Sum_probs=34.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++||.++|.|.|.-+|+.++.-|.++|+.|.++...
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~  191 (282)
T PRK14180        155 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF  191 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCC
Confidence            4789999999999999999999999999999988764

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=93.32  E-value=0.7  Score=35.19  Aligned_cols=34  Identities=24%  Similarity=0.252  Sum_probs=29.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+++++|.| .+++|..+++.+...|.+|+++.++
T Consensus       165 ~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~  198 (345)
T cd08260         165 PGEWVAVHG-CGGVGLSAVMIASALGARVIAVDID  198 (345)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCC
Confidence            467899999 6899999999888889999888775

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=93.30  E-value=0.22  Score=37.50  Aligned_cols=35  Identities=29%  Similarity=0.320  Sum_probs=31.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+++|.|+++++|..+++.....|++|+++.++
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~  180 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGK  180 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecC
Confidence            35789999999999999999888899999888776

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=93.18  E-value=0.24  Score=40.03  Aligned_cols=37  Identities=24%  Similarity=0.439  Sum_probs=32.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      .+.||+++|.|.+ .||+.+|+.+...|++|+++.+++
T Consensus       251 ~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp  287 (476)
T PTZ00075        251 MIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDP  287 (476)
T ss_pred             CcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCc
Confidence            5789999999976 599999999999999999987764

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=93.10  E-value=0.73  Score=35.86  Aligned_cols=34  Identities=21%  Similarity=0.268  Sum_probs=28.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      .+.+++|.| .+++|..++..+...|+ +|++++++
T Consensus       190 ~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~  224 (373)
T cd08299         190 PGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDIN  224 (373)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence            467899996 58999999999889998 68888775

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.07  E-value=0.43  Score=36.05  Aligned_cols=37  Identities=22%  Similarity=0.361  Sum_probs=33.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++||.++|.|.|.-+|+.++.-|.++|+.|.++...
T Consensus       153 ~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~  189 (282)
T PRK14169        153 DVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSK  189 (282)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCC
Confidence            4789999999999999999999999999999888654

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=93.07  E-value=0.18  Score=38.73  Aligned_cols=33  Identities=18%  Similarity=0.204  Sum_probs=28.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-------cEEEEecC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGA-------TVAFTYVK   73 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~-------~Vi~~~~~   73 (149)
                      +.+.|+|++|.+|..++..|+..|.       .+++++.+
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~   42 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELP   42 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecC
Confidence            3689999999999999999998874       58888885

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	149
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		2e-26
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		1e-25
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		2e-14
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		3e-10
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		9e-10
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		4e-09
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		1e-08
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		1e-08
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		1e-08
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		2e-08
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		2e-08
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		6e-08
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		6e-08
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		7e-08
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		3e-07
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		4e-07
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		4e-07
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		4e-07
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		5e-07
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		6e-07
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		6e-07
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		6e-07
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		6e-07
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		6e-07
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		6e-07
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		7e-07
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		1e-06
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		1e-06
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		1e-06
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		1e-06
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		2e-06
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		2e-06
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		2e-06
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		2e-06
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		2e-06
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		2e-06
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		2e-06
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		2e-06
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		2e-06
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		3e-06
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		3e-06
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-06
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		3e-06
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		4e-06
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		5e-06
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		6e-06
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		6e-06
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		8e-06
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		8e-06
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		9e-06
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		9e-06
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-05
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		1e-05
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		1e-05
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		2e-05
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-05
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		2e-05
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		2e-05
2p91_A	285	Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R		2e-05
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		2e-05
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		2e-05
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		3e-05
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		3e-05
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		3e-05
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		3e-05
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		3e-05
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		4e-05
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		4e-05
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		4e-05
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		4e-05
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		4e-05
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		4e-05
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		4e-05
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		4e-05
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-05
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-05
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		4e-05
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-05
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		5e-05
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		5e-05
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		5e-05
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		5e-05
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		5e-05
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		6e-05
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		6e-05
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		7e-05
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		7e-05
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		8e-05
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		1e-04
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		1e-04
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		1e-04
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-04
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		1e-04
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		1e-04
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		1e-04
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		1e-04
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		1e-04
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		1e-04
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		1e-04
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		2e-04
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		2e-04
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		2e-04
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		2e-04
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		2e-04
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		2e-04
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		3e-04
3sc4_A	285	Crystal Structure Of A Short Chain Dehydrogenase (A		3e-04
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		3e-04
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		4e-04
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		4e-04
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		4e-04
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		4e-04
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		5e-04
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		5e-04
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		5e-04
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		5e-04
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		5e-04
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		5e-04
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		6e-04
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		6e-04
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		6e-04
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		7e-04
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		8e-04
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		8e-04

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score =  114 bits (285), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 86/143 (60%), Gaps = 6/143 (4%)
Query: 7   PPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGAT 66
           P Q Q+ QPG E +MNP+PQF  P+Y  S KL+G   L+TGGDSGIGRAV   FA+EGA 
Sbjct: 14  PAQHQNKQPGIESLMNPLPQFEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGAN 73
Query: 67  VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRID 126
           +A  Y+   E+ DA ET + + +    +    + +  DL  +++CK +V E V     ++
Sbjct: 74  IAIAYLD--EEGDANETKQYVEK----EGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLN 127
Query: 127 ILVNNAAEQYECGSVEDIDESRL 149
           ILVNN A+QY    +E I   +L
Sbjct: 128 ILVNNVAQQYPQQGLEYITAEQL 150

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score =  111 bits (278), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 85/143 (59%), Gaps = 6/143 (4%)
Query: 7   PPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGAT 66
           P Q Q+ QPG E + NP+PQF  P+Y  S KL+G   L+TGGDSGIGRAV   FA+EGA 
Sbjct: 14  PAQHQNKQPGIESLXNPLPQFEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGAN 73
Query: 67  VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRID 126
           +A  Y+   E+ DA ET + + +    +    + +  DL  +++CK +V E V     ++
Sbjct: 74  IAIAYLD--EEGDANETKQYVEK----EGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLN 127
Query: 127 ILVNNAAEQYECGSVEDIDESRL 149
           ILVNN A+QY    +E I   +L
Sbjct: 128 ILVNNVAQQYPQQGLEYITAEQL 150

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 6/147 (4%)
Query: 3   SNNQPPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQ 62
           +   P QKQ   PG +  M P+P      Y  S +L+   ALVTGGDSGIGRA    +A+
Sbjct: 13  TGEYPKQKQPA-PGVQAKMTPVPDCGEKSYVGSGRLKDRKALVTGGDSGIGRAAAIAYAR 71
Query: 63  EGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAY 122
           EGA VA  Y+ P E++DA++   ++ E      +  + +  DL  +   + +V +   A 
Sbjct: 72  EGADVAINYL-PAEEEDAQQVKALIEEC----GRKAVLLPGDLSDESFARSLVHKAREAL 126
Query: 123 DRIDILVNNAAEQYECGSVEDIDESRL 149
             +DIL   A +Q     ++D+   + 
Sbjct: 127 GGLDILALVAGKQTAIPEIKDLTSEQF 153

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+G VALVTG   GIGRA+    A++GA V   Y     ++ A E ++ +++  +    D
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNY--AGNEQKANEVVDEIKKLGS----D 55
Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            +A+ AD+   E+   +V + V+ + ++DILVNNA
Sbjct: 56  AIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNA 90

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 58/95 (61%), Gaps = 9/95 (9%)
Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L+G  ALVTG  +GIG+A+      EGA V    +  + +++  ET++ +R A+ PDA 
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANV---LINGRREENVNETIKEIR-AQYPDA- 61
Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNN 131
               + ADLG ++ C+ V+++    Y ++DIL+NN
Sbjct: 62  ILQPVVADLGTEQGCQDVIEK----YPKVDILINN 92

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           KL G VAL+TGG SG+GRA+   F  EGA VA        DK A    E LRE +     
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVL------DKSA----ERLRELEVAHGG 51
Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           + + +  D+   ++ KR  +  + A+ +ID L+ NA       ++ D+ E ++
Sbjct: 52  NAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKI 104

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 43  ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS 102
           ALVTG   GIGR++    A+EG  VA  Y   +E  +A     ++ E K     D  AI 
Sbjct: 13  ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEA-----VVEEIKAKGV-DSFAIQ 66
Query: 103 ADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           A++   +  K ++ EVV+ +  +D+LVNNA
Sbjct: 67  ANVADADEVKAMIKEVVSQFGSLDVLVNNA 96

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 56/116 (48%), Gaps = 10/116 (8%)
Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           S  L G  A VTGG  GIG A+    A EGA VA TYV   E   A     ++ E +   
Sbjct: 26  SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQA-----VVSEIEQAG 80
Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQY----ECGSVEDIDE 146
            +  +AI AD    E  ++ + E V A   +DILVN+A   +    E  +V D DE
Sbjct: 81  GR-AVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDE 135

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           KL+G V+LVTG   GIGRA+    A  G+TV  T    +  K   E      E       
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAE------EIANKYGV 57
Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
               +  +L  +E+  +  +E+ N  D IDILVNNA 
Sbjct: 58  KAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAG 94

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 46/90 (51%), Gaps = 13/90 (14%)
Query: 44  LVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISA 103
           LVTGG  GIGRA+   FA+EGA VA   ++P    + KE  E +  A             
Sbjct: 10  LVTGGARGIGRAIAQAFAREGALVALCDLRP----EGKEVAEAIGGAF---------FQV 56
Query: 104 DLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
           DL  +    R V+E   A  R+D+LVNNAA
Sbjct: 57  DLEDERERVRFVEEAAYALGRVDVLVNNAA 86

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 43  ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS 102
           ALVTG   GIGR++    A+EG  VA  Y        +KE  E + E       D  AI 
Sbjct: 7   ALVTGASRGIGRSIALQLAEEGYNVAVNYA------GSKEKAEAVVEEIKAKGVDSFAIQ 60
Query: 103 ADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           A++   +  K  + EVV+ +  +D+LVNNA
Sbjct: 61  ANVADADEVKAXIKEVVSQFGSLDVLVNNA 90

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           KL G  ALVTG   GIG A+  CF  +GA V       +EDK        L+E      K
Sbjct: 24  KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLH--GTREDK--------LKEIAADLGK 73
Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
           D    SA+L   ++ K++ +      + IDILVNNA 
Sbjct: 74  DVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAG 110

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 10/132 (7%)
Query: 13  TQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYV 72
           TQP  E   + IP    P    S  L G VALVTG   GIGR +     + G  V   Y 
Sbjct: 5   TQPRGESKYDAIPGPLGPQ---SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYA 61
Query: 73  KPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              E   A+E +  +++    +  D   + A++G  E+  R+ +E V  + ++DI+ +N+
Sbjct: 62  NSTE--SAEEVVAAIKK----NGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNS 115
Query: 133 AEQYECGSVEDI 144
                 G V+D+
Sbjct: 116 G-VVSFGHVKDV 126

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 10/132 (7%)
Query: 13  TQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYV 72
           TQP  E   + IP    P    S  L G VALVTG   GIGR +     + G  V   Y 
Sbjct: 5   TQPRGESKYDAIPGPLGPQ---SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYA 61
Query: 73  KPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              E   A+E +  +++    +  D   + A++G  E+  R+ +E V  + ++DI+ +N+
Sbjct: 62  NSTE--SAEEVVAAIKK----NGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNS 115
Query: 133 AEQYECGSVEDI 144
                 G V+D+
Sbjct: 116 G-VVSFGHVKDV 126

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           V LVTGG  GIG AVC   A++G  V   Y   +E  DA      +  A T    + +AI
Sbjct: 28  VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADA------VVAAITESGGEAVAI 81
Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             D+G   +       V   + R+D LVNNA
Sbjct: 82  PGDVGNAADIAAXFSAVDRQFGRLDGLVNNA 112

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           VA++TG  +GIGRA    FA+EGA V  T    +  +  +ET + +  A   + ++  ++
Sbjct: 8   VAIITGSSNGIGRATAVLFAREGAKVTIT---GRHAERLEETRQQILAAGVSE-QNVNSV 63
Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNAA-----EQYECGSVEDIDE 146
            AD+  D     ++   +  + ++DILVNNA       Q + G+ + I+ 
Sbjct: 64  VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIES 113

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           + G VA++TG  SGIG A+   FA+EGA +    V  Q D+      E  R  K      
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVL--VARQVDR----LHEAARSLKEKFGVR 58
Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDES 147
            + ++ D+   E    VV+ V +++   DILVNNA      GS E I E+
Sbjct: 59  VLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAG----TGSNETIMEA 104

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           + G VA++TG  SGIG A+   FA+EGA +    V  Q D+      E  R  K      
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVL--VARQVDR----LHEAARSLKEKFGVR 58
Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDES 147
            + ++ D+   E    VV+ V +++   DILVNNA      GS E I E+
Sbjct: 59  VLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAG----TGSNETIMEA 104

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           KL+G   L+TGG SG+GRA+   F  EGA VA        DK A    E L E +T    
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVL------DKSA----ERLAELETDHGD 51
Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           + + I  D+   E+ K+     V  + +ID L+ NA       ++ D+ E  L
Sbjct: 52  NVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESL 104

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L G  AL+TG   GIGRA    + +EGA VA           A   LE  R        
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAI----------ADINLEAARATAAEIGP 51
Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
              AI+ D+    +  R V E+++ +  IDILVNNAA
Sbjct: 52  AACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAA 88

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 31  DYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREA 90
            Y     L+G VA+VTGG +GIG+A+     + G+ V     K +  K A + L    +A
Sbjct: 9   SYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADEL----QA 64
Query: 91  KTPDAKDP--MAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQY 136
             P  K    + I  ++  +E    +V   ++ + +I+ LVNN   Q+
Sbjct: 65  NLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQF 112

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+G   L+TG   GIG A    FA+ GA V     K   + D  ET+  +R     D  D
Sbjct: 5   LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANID--ETIASMR----ADGGD 58
Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDES 147
               +ADL   E C+++VDE V  +  ID+L+NNA        + +ID++
Sbjct: 59  AAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDT 108

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+G VA+VTG  SGIG  +    A +GA +           DA E  ++           
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG-----DAAEIEKVRAGLAAQHGVK 56
Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYEC 138
            +   ADL   E  + +VD  V    RIDILVNNA  Q+  
Sbjct: 57  VLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTA 97

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+G VA+VTG  SGIG  +    A +GA +           DA E  ++           
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG-----DAAEIEKVRAGLAAQHGVK 56
Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYEC 138
            +   ADL   E  + +VD  V    RIDILVNNA  Q+  
Sbjct: 57  VLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTA 97

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+G VA+VTG  SGIG  +    A +GA +           DA E  ++           
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG-----DAAEIEKVRAGLAAQHGVK 56
Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYEC 138
            +   ADL   E  + +VD  V    RIDILVNNA  Q+  
Sbjct: 57  VLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTA 97

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 44  LVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISA 103
           ++TG  +GIGR     FAQEGA V  T    +  +  +ET +++ ++   + K   ++ A
Sbjct: 10  IITGSSNGIGRTTAILFAQEGANVTIT---GRSSERLEETRQIILKSGVSE-KQVNSVVA 65
Query: 104 DLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
           D+  ++   ++++  +  + +ID+LVNNA 
Sbjct: 66  DVTTEDGQDQIINSTLKQFGKIDVLVNNAG 95

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 29  SPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLR 88
           S  Y P  +L G VALVTG   GIG AV     + GA V   Y      KDA++ +  ++
Sbjct: 8   SETYIP-GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNY--ANSTKDAEKVVSEIK 64
Query: 89  EAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
              +    D +AI AD+       ++ D+ V  +  +DI V+N+      G ++D+ E
Sbjct: 65  ALGS----DAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSG-VVSFGHLKDVTE 117

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 29  SPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLR 88
           S  Y P  +L G VALVTG   GIG AV     + GA V   Y      KDA++ +  ++
Sbjct: 8   SETYIP-GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNY--ANSTKDAEKVVSEIK 64
Query: 89  EAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
              +    D +AI AD+       ++ D+ V  +  +DI V+N+      G ++D+ E
Sbjct: 65  ALGS----DAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSG-VVSFGHLKDVTE 117

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +  G   ++TG  +GIGR+    FA+EGA V  T     ED+  +ET + + +A  P A+
Sbjct: 23  RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTIT--GRNEDR-LEETKQQILKAGVP-AE 78
Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGS 140
              A+ AD+        +++  +  + +IDILVNNA      G+
Sbjct: 79  KINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGT 122

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 58/155 (37%), Gaps = 31/155 (20%)
Query: 6   QPP---QKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQ 62
           QPP   +  D  P   H+  P            + LR  VA +TGG SGIG  +   F +
Sbjct: 2   QPPPDVEGDDCLPAYRHLFCP------------DLLRDKVAFITGGGSGIGFRIAEIFMR 49
Query: 63  EGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAY 122
            G             +     L   R+      +  + +S D+         VD+ +  +
Sbjct: 50  HGCHTVI------ASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF 103
Query: 123 DRIDILVNNAAEQYEC----------GSVEDIDES 147
            RIDIL+N AA  + C           +V DID S
Sbjct: 104 GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTS 138

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Query: 26  QFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLE 85
              S   T  + L   VALVT    GIG A+    AQ+GA V  +  K Q    A  TL+
Sbjct: 1   SMASSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQ 60
Query: 86  MLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDID 145
                   +          +G  E+ +R+V   V  +  IDILV+NAA     GS+ D+ 
Sbjct: 61  -------GEGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVT 113
Query: 146 E 146
           E
Sbjct: 114 E 114

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 16/119 (13%)
Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           +N+L+G VALVTGG SG+G  V      EGA VAF+ +     +     L          
Sbjct: 1   TNRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---------- 50
Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA----EQYECGSVEDIDESRL 149
            +  M +  D+  + +   V+  V      +++LVNNA        E G +ED   SRL
Sbjct: 51  GERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDF--SRL 107

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 34  PSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTP 93
           P   L G +ALVTGG  GIG+ +     + GA V   ++  ++ +   +T       +  
Sbjct: 23  PYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARV---FICARDAEACADT-----ATRLS 74
Query: 94  DAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQY 136
              D  AI ADL  +   +R+   +     R+DILVNNA   +
Sbjct: 75  AYGDCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSW 117

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            L G  A+VTG  SGIGRA+ H +A+ GA V   + +    K+  + +            
Sbjct: 28  SLAGRTAVVTGAGSGIGRAIAHGYARAGAHV-LAWGRTDGVKEVADEI-------ADGGG 79
Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              A+ ADL   E    V +E+  A  R+D+LVNNA
Sbjct: 80  SAEAVVADLADLEGAANVAEELA-ATRRVDVLVNNA 114

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G V ++TG  +G+G+++   FA E A V   Y + +ED +A   LE +++       +
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNY-RSKED-EANSVLEEIKKV----GGE 58
Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
            +A+  D+  + +   +V   +  + ++D+++NNA 
Sbjct: 59  AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAG 94

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G V ++TG  +G+G+++   FA E A V   Y + +ED +A   LE +++       +
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNY-RSKED-EANSVLEEIKKV----GGE 58
Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
            +A+  D+  + +   +V   +  + ++D+++NNA 
Sbjct: 59  AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAG 94

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G V ++TG  +G+G+++   FA E A V   Y + +ED +A   LE +++       +
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNY-RSKED-EANSVLEEIKKV----GGE 58
Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
            +A+  D+  + +   +V   +  + ++D+++NNA 
Sbjct: 59  AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAG 94

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G V ++TG  +G+G+++   FA E A V   Y + +ED +A   LE +++       +
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNY-RSKED-EANSVLEEIKKV----GGE 58
Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
            +A+  D+  + +   +V   +  + ++D+++NNA 
Sbjct: 59  AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAG 94

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           VA+VTGG  GIGR +    A +G  +A   + PQ+++ A ET++++  A     +  + +
Sbjct: 4   VAMVTGGAQGIGRGISEKLAADGFDIAVADL-PQQEEQAAETIKLIEAAD----QKAVFV 58
Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
             D+    N    +DE        D+LVNNA 
Sbjct: 59  GLDVTDKANFDSAIDEAAEKLGGFDVLVNNAG 90

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDK-DAKETLEMLREAKTPDAK 96
           L+  V ++TGG +G+GRA+   F QE A V   Y   +E+  DAK+ +E   EA      
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVE---EA----GG 65
Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
             + +  D+  +E+   +V   +  +  +D+++NNA 
Sbjct: 66  QAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAG 102

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDK-DAKETLEMLREAKTPDAK 96
           L+  V ++TGG +G+GRA+   F QE A V   Y   +E+  DAK+ +E   EA      
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVE---EA----GG 65
Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
             + +  D+  +E+   +V   +  +  +D+++NNA 
Sbjct: 66  QAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAG 102

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 32  YTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAK 91
           Y  S  L   V +VTGG SGIGRA    FA+ GA V    V   ED   +   E+  +A 
Sbjct: 19  YFQSXDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADV--NEDAAVRVANEIGSKA- 75
Query: 92  TPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                    +  D+   ++ +  V++    + R+D+LVNNA
Sbjct: 76  -------FGVRVDVSSAKDAESXVEKTTAKWGRVDVLVNNA 109

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDK-DAKETLEMLREAKTPDAK 96
           L+  V ++TGG +G+GRA+   F QE A V   Y   +E+  DAK+ +E   EA      
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVE---EA----GG 65
Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
             + +  D+  +E+   +V   +  +  +D+++NNA 
Sbjct: 66  QAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAG 102

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+G VALVTG   GIGRA+    A +GA VA  Y   +E  +A+ET+  ++     +   
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKE--EAEETVYEIQ----SNGGS 58
Query: 98  PMAISADL----GFDENCKRVVDEVVN--AYDRIDILVNNA 132
             +I A+L    G +     + +E+ N     + DIL+NNA
Sbjct: 59  AFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNA 99

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           + +L+  +A++TGG +GIGRA+   FA EGA +A   + P  + +A         A    
Sbjct: 2   TQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---------AIRNL 52
Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            +  + +  D+    + +    +V++ + R DILVNNA
Sbjct: 53  GRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNA 90

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 34  PSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTP 93
           P+  L+  V L+TG  +G+G+     FA+ GA V        + KDA +T++ ++ A   
Sbjct: 316 PTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVV-----NDFKDATKTVDEIKAAGGE 370
Query: 94  DAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
              D   ++ D       + ++  V++ Y  IDILVNNA 
Sbjct: 371 AWPDQHDVAKD------SEAIIKNVIDKYGTIDILVNNAG 404

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           LRG VALVTGG  G+G  +    A+ G +V    V  +  ++A E  + L E       +
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVV---VASRNLEEASEAAQKLTE---KYGVE 72
Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
            MA   D+   E  K++++ V   + ++D +VN A 
Sbjct: 73  TMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAG 108

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L G  AL+TG   GIGRA    + +EGATVA        D D    +E  R+A      
Sbjct: 5   RLEGKSALITGSARGIGRAFAEAYVREGATVAIA------DID----IERARQAAAEIGP 54
Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
              A+  D+   ++    +   V     +DILVNNAA
Sbjct: 55  AAYAVQXDVTRQDSIDAAIAATVEHAGGLDILVNNAA 91

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 45/109 (41%), Gaps = 11/109 (10%)
Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           S +L G VALV+GG  G+G +       EGA V F  +  +E K     L         D
Sbjct: 2   SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLD 61
Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVED 143
              P             K  VD  V A+  + +LVNNA      G++ED
Sbjct: 62  VTQP----------AQWKAAVDTAVTAFGGLHVLVNNAG-ILNIGTIED 99

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 43  ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS 102
           AL+T G  G+G+ V      +G +V  TY     D  A ET+   +E      +    + 
Sbjct: 10  ALITAGTKGLGKQVTEKLLAKGYSVTVTY---HSDTTAMETM---KETYKDVEERLQFVQ 63
Query: 103 ADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
           AD+   E+  ++V+E ++ + +ID L+NNA 
Sbjct: 64  ADVTKKEDLHKIVEEAMSHFGKIDFLINNAG 94

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           ++ + G VALVTG   GIGRA       +GA VA      +     K     L E   P 
Sbjct: 2   AHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAA---LHEQFEP- 57
Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
            +  + I  D+   +  +    +VV+ + R+DILVNNA 
Sbjct: 58  -QKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAG 95

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 15/119 (12%)
Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKD--------AKETLEM 86
           N+L+G VA +TG   G GR      AQ+GA  VA    + Q + D         KET+ +
Sbjct: 42  NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRL 101
Query: 87  LREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA--AEQYECGSVED 143
           + E      +  +A  AD+    + + VVDE +  +  IDILV+N   + Q E  S+ D
Sbjct: 102 VEE----QGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTD 156

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+G  ALVTGG  GIG A+    A  GA V   Y   + +K+  E LE+ RE K  + + 
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARV---YTCSRNEKELDECLEIWRE-KGLNVEG 74
Query: 98  PMAISADLGFDENCKRVVDEVVNAYD-RIDILVNNAA 133
            +    DL       +++  V + +D +++ILVNNA 
Sbjct: 75  SV---CDLLSRTERDKLMQTVAHVFDGKLNILVNNAG 108

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 44  LVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISA 103
           LVTGG  GIGR +   FA+ GA VA     P+E       L  L       A + + +  
Sbjct: 45  LVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGEL------GAGNVIGVRL 98
Query: 104 DLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           D+    +C      VV+A+  +D++  NA
Sbjct: 99  DVSDPGSCADAARTVVDAFGALDVVCANA 127

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +  G V LVTG  +G+GRA    FA+ GA V    +        K +L   +  +    +
Sbjct: 27  RFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRR 86
Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
              A+ A+    E  ++VV   ++A+ RID++VNNA 
Sbjct: 87  GGKAV-ANYDSVEEGEKVVKTALDAFGRIDVVVNNAG 122

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 22  NPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAK 81
           N + QF +        L G VALVTG   GIG+A+    A+ GA V  T       +   
Sbjct: 2   NAMSQFMN--------LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAIS 53
Query: 82  ETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
           + L    +    +  +P +I A L      K + DE    +  +DILVNNAA
Sbjct: 54  DYLGDNGKGMALNVTNPESIEAVL------KAITDE----FGGVDILVNNAA 95

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           S K  G V LVTG    IG A     A+EG  +A        +++A E  E     K  +
Sbjct: 2   SKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALL----DMNREALEKAEASVREKGVE 57
Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVED 143
           A+  +    D+  +E     VD VV  + +ID L NNA  Q     V+D
Sbjct: 58  ARSYV---CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQD 103

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 13/111 (11%)
Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA---KETLEMLREAKTPD 94
           L+G VA VTG   GIG AV   +AQ GA VA  Y     D+ A   ++T  +  +A   +
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCN 91
Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDID 145
             DP ++          +  + +    +  ID+ V NA   +  G   D+D
Sbjct: 92  ISDPKSV----------EETISQQEKDFGTIDVFVANAGVTWTQGPEIDVD 132

>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 20  VMNPIPQFTSPDYTPSNKLRGMVALVTG--GDSGIGRAVCHCFAQEGATVAFTYVKPQED 77
           ++  + +F++        L G  AL+TG   +  I   +   F +EGA +AFTY  P+ +
Sbjct: 1   MLRKLSKFSNKGEVFMGLLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLE 60
Query: 78  KDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA---- 133
           K  +E                + +  D+  DE+ K +   +   +  +DI+V++ A    
Sbjct: 61  KRVREI--------AKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPK 112
Query: 134 EQYECGSVEDIDESR 148
           E+++ G    ID SR
Sbjct: 113 EEFKGGV---IDTSR 124

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           S +    V +VTG   GIG+A     A+EGA V    +         E  E + +    D
Sbjct: 4   SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINA-------EAAEAVAKQIVAD 56
Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
               ++++ D+   E+ K + D  +  +  ID LVNNAA
Sbjct: 57  GGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAA 95

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           SN+L G VA++TGG  GIG A+   F +EGA V  T      D+ +    +  +   TPD
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMIT------DRHSDVGEKAAKSVGTPD 54
Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
                    D   ++   ++ D    A+  +  LVNNA 
Sbjct: 55  --QIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAG 91

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+  V +VTG  SGIGRA+   FA   + V    V+  ED+   + ++ LR       K+
Sbjct: 5   LKNKVVIVTGAGSGIGRAIAKKFALNDSIV--VAVELLEDR-LNQIVQELRGM----GKE 57
Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
            + + AD+   ++ +  V      Y RID+L NNA 
Sbjct: 58  VLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAG 93

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 19/114 (16%)
Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREA------KTPDA 95
           VALVTG  SGIG  +     +EG  V   +V  + ++  + TL+ LREA      +T D 
Sbjct: 24  VALVTGATSGIGLEIARRLGKEGLRV---FVCARGEEGLRTTLKELREAGVEADGRTCDV 80
Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           +    I A          +V  VV  Y  +D+LVNNA       + E  DE  L
Sbjct: 81  RSVPEIEA----------LVAAVVERYGPVDVLVNNAGRLGGGATAELADELWL 124

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 19/114 (16%)
Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREA------KTPDA 95
           VALVTG  SGIG  +     +EG  V   +V  + ++  + TL+ LREA      +T D 
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRV---FVCARGEEGLRTTLKELREAGVEADGRTCDV 84
Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           +    I A          +V  VV  Y  +D+LVNNA       + E  DE  L
Sbjct: 85  RSVPEIEA----------LVAAVVERYGPVDVLVNNAGRLGGGATAELADELWL 128

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 44/109 (40%), Gaps = 11/109 (10%)
Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           S +L G VALV+GG  G G +       EGA V F  +  +E K     L         D
Sbjct: 2   SGRLTGKVALVSGGARGXGASHVRAXVAEGAKVVFGDILDEEGKAXAAELADAARYVHLD 61
Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVED 143
              P             K  VD  V A+  + +LVNNA      G++ED
Sbjct: 62  VTQP----------AQWKAAVDTAVTAFGGLHVLVNNAG-ILNIGTIED 99

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 48/108 (44%)
Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           S  L G    +TG   GIG A+    A++GA VA        +     T+     A    
Sbjct: 1   SLTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA 60
Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVE 142
               +A+  D+  ++  +  V   V+ +  IDILVNNA+  +  G+++
Sbjct: 61  GGQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLD 108

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 19/114 (16%)
Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREA------KTPDA 95
           VALVTG  SGIG  +     +EG  V   +V  + ++  + TL+ LREA      +T D 
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRV---FVCARGEEGLRTTLKELREAGVEADGRTCDV 84
Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           +    I A          +V  VV  Y  +D+LVNNA       + E  DE  L
Sbjct: 85  RSVPEIEA----------LVAAVVERYGPVDVLVNNAGRPGGGATAELADELWL 128

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEML-REAKTPDAKDPMA 100
           VA VTGG  G+G A+       G  VA   V   E  D   T  M  R+A     +D  A
Sbjct: 27  VAFVTGGMGGLGAAISRRLHDAGMAVA---VSHSERNDHVSTWLMHERDA----GRDFKA 79
Query: 101 ISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
            + D+   E+C+R  ++V+  + ++D+L+NNA 
Sbjct: 80  YAVDVADFESCERCAEKVLADFGKVDVLINNAG 112

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 19/114 (16%)
Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREA------KTPDA 95
           VALVTG  SGIG  +     +EG  V   +V  + ++  + TL+ LREA      +T D 
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRV---FVCARGEEGLRTTLKELREAGVEADGRTCDV 84
Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           +    I A          +V  VV  Y  +D+LVNNA       + E  DE  L
Sbjct: 85  RSVPEIEA----------LVAAVVERYGPVDVLVNNAGRPGGGATAELADELWL 128

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 19/114 (16%)
Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREA------KTPDA 95
           VALVTG  SGIG  +     +EG  V   +V  + ++  + TL+ LREA      +T D 
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRV---FVCARGEEGLRTTLKELREAGVEADGRTCDV 84
Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           +    I A          +V  VV  Y  +D+LVNNA       + E  DE  L
Sbjct: 85  RSVPEIEA----------LVAAVVERYGPVDVLVNNAGRPGGGATAELADELWL 128

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 15/105 (14%)
Query: 37  KLR--GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKD------AKETLEMLR 88
           KLR  G VA+VTG  +G+GR     FA+ GA V    +      D      A   ++ +R
Sbjct: 14  KLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIR 73
Query: 89  EAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
           +A      D  ++        +  +V++  + A+ R+DILVNNA 
Sbjct: 74  KAGGEAVADYNSVI-------DGAKVIETAIKAFGRVDILVNNAG 111

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G VALVTG   GIG+A+    A+ GA V  T       +   + L    +    +  +
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGXALNVTN 66
Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
           P +I A L      K + DE    +  +DILVNNA 
Sbjct: 67  PESIEAVL------KAITDE----FGGVDILVNNAG 92

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 19/114 (16%)
Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREA------KTPDA 95
           VALVTG  SGIG  +     +EG  V   +V  + ++  + TL+ LREA      +T D 
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRV---FVCARGEEGLRTTLKELREAGVEADGRTCDV 84
Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           +    I A          +V  VV  Y  +D+LVNNA       + E  DE  L
Sbjct: 85  RSVPEIEA----------LVAAVVERYGPVDVLVNNAGRPGGGATAELADELWL 128

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 19/114 (16%)
Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREA------KTPDA 95
           VALVTG  SGIG  +     +EG  V   +V  + ++  + TL+ LREA      +T D 
Sbjct: 24  VALVTGATSGIGLEIARRLGKEGLRV---FVCARGEEGLRTTLKELREAGVEADGRTCDV 80
Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           +    I A          +V  VV  Y  +D+LVNNA       + E  DE  L
Sbjct: 81  RSVPEIEA----------LVAAVVERYGPVDVLVNNAGRPGGGATAELADELWL 124

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 18/111 (16%)
Query: 22  NPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAK 81
           N + QF +        L G VALVTG   GIG+A+    A+ GA V  T       +   
Sbjct: 2   NAMSQFMN--------LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAIS 53
Query: 82  ETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           + L    +    +  +P +I A L      K + DE    +  +DILVNNA
Sbjct: 54  DYLGDNGKGMALNVTNPESIEAVL------KAITDE----FGGVDILVNNA 94

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 18/111 (16%)
Query: 22  NPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAK 81
           N + QF +        L G VALVTG   GIG+A+    A+ GA V  T       +   
Sbjct: 2   NAMSQFMN--------LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAIS 53
Query: 82  ETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           + L    +    +  +P +I A L      K + DE    +  +DILVNNA
Sbjct: 54  DYLGDNGKGMALNVTNPESIEAVL------KAITDE----FGGVDILVNNA 94

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 18/111 (16%)
Query: 22  NPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAK 81
           N + QF +        L G VALVTG   GIG+A+    A+ GA V  T       +   
Sbjct: 2   NAMSQFMN--------LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAIS 53
Query: 82  ETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           + L    +    +  +P +I A L      K + DE    +  +DILVNNA
Sbjct: 54  DYLGDNGKGMALNVTNPESIEAVL------KAITDE----FGGVDILVNNA 94

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 18/111 (16%)
Query: 22  NPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAK 81
           N + QF +        L G VALVTG   GIG+A+    A+ GA V  T       +   
Sbjct: 2   NAMSQFMN--------LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAIS 53
Query: 82  ETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           + L    +    +  +P +I A L      K + DE    +  +DILVNNA
Sbjct: 54  DYLGDNGKGMALNVTNPESIEAVL------KAITDE----FGGVDILVNNA 94

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 19/114 (16%)
Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREA------KTPDA 95
           VALVTG  SGIG  +     +EG  V   +V  + ++  + TL+ LREA      +T D 
Sbjct: 8   VALVTGATSGIGLEIARRLGKEGLRV---FVCARGEEGLRTTLKELREAGVEADGRTCDV 64
Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           +    I A          +V  VV  Y  +D+LVNNA       + E  DE  L
Sbjct: 65  RSVPEIEA----------LVAAVVERYGPVDVLVNNAGRPGGGATAELADELWL 108

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 43  ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS 102
           ALVTG   G+G+A     A+ G  +   Y + +     K  LE   E +    K  + + 
Sbjct: 7   ALVTGSSRGVGKAAAIRLAENGYNIVINYARSK-----KAALETAEEIEKLGVK-VLVVK 60
Query: 103 ADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
           A++G     K +  ++   + R+D+ VNNAA
Sbjct: 61  ANVGQPAKIKEMFQQIDETFGRLDVFVNNAA 91

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 18/103 (17%)
Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKT---- 92
           +L+G  A+VTG   G+G+A+       GA +           DA  T E  + A      
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDA--TAEEFKAAGINVVV 59
Query: 93  --PDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
              D K+P          E+ + +V   ++A+ RIDILVNNA 
Sbjct: 60  AKGDVKNP----------EDVENMVKTAMDAFGRIDILVNNAG 92

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           SN+L G VA++TGG  GIG A+   F +EGA V  T        D  E  +  +   TPD
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMIT----GRHSDVGE--KAAKSVGTPD 54
Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
                    D   ++   ++ D    A+  +  LVNNA 
Sbjct: 55  --QIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAG 91

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 26  QFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLE 85
           QF+   ++    L+G +ALVTG   GIG A+   +A+ GAT+ F  +        +E ++
Sbjct: 24  QFSLDQFS----LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDIN-------QELVD 72
Query: 86  MLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
               A      +      D+  ++  + +V ++ +    IDILVNNA 
Sbjct: 73  RGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESEVGIIDILVNNAG 120

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
          N+LR  +ALVTG  SGIGRAV    A EGATVA        D D     E +R    P +
Sbjct: 3  NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAAC------DLDRAAAQETVRLLGGPGS 56
Query: 96 KD 97
          K+
Sbjct: 57 KE 58

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           + +L G  ALVTG   GIG+A+    A +GATV  + +  +  K A  ++          
Sbjct: 1   TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---------- 50
Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
            K   AI+AD+    + K +  E+      IDILVNNA+
Sbjct: 51  GKKARAIAADISDPGSVKALFAEIQALTGGIDILVNNAS 89

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           + +L G  ALVTG   GIG+A+    A +GATV  + +  +  K A  ++          
Sbjct: 1   TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---------- 50
Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
            K   AI+AD+    + K +  E+      IDILVNNA+
Sbjct: 51  GKKARAIAADISDPGSVKALFAEIQALTGGIDILVNNAS 89

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 9/120 (7%)
Query: 29  SPDYTPS-NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEML 87
           S  Y P  + L+  + LVTG   GIGR     +A+ GATV    +   E+K  +    + 
Sbjct: 2   SLHYQPKQDLLQNRIILVTGASDGIGREAALTYARYGATVIL--LGRNEEKLRRVAQHIA 59
Query: 88  REAKTPDAKDPMAISADL--GFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDID 145
            E        P   + DL     E C++V D +   Y R+D +++NA    E G + + D
Sbjct: 60  DEQHV----QPQWFTLDLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPMSEQD 115

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 22/112 (19%)
Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           VALVTG    +G ++      EG TV   Y +   D     TL     A+ P++   + +
Sbjct: 9   VALVTGAAKRLGSSIAEALHAEGYTVCLHYHRSAAD---ASTLAATLNARRPNSA--ITV 63
Query: 102 SADL------GFDEN-----------CKRVVDEVVNAYDRIDILVNNAAEQY 136
            ADL       F E            C  +VD     + R D+LVNNA+  Y
Sbjct: 64  QADLSNVATASFSETDGSVPVTLFSRCSALVDACYMHWGRCDVLVNNASSFY 115

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 13/108 (12%)
Query: 30  PDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRE 89
           P+  P+   +   A+VTGG+ GIG  +C   +  G  V  T     +  +A E L+    
Sbjct: 2   PETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNH 61
Query: 90  AKTP----DAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
                   D  DP+A  + L          D +   + ++DILVNNA 
Sbjct: 62  ENVVFHQLDVTDPIATMSSLA---------DFIKTHFGKLDILVNNAG 100

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 33  TPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREA-- 90
           +P+ +    V L+TGG SG+GRA     A EGA ++   V       + E LE  + A  
Sbjct: 6   SPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDV-------SSEGLEASKAAVL 58
Query: 91  -KTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              PDA + +   AD+  +   +  V      + RID   NNA
Sbjct: 59  ETAPDA-EVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNA 100

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 15/95 (15%)
Query: 39  RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKD-AKETLEMLREAKTPDAKD 97
           RG++  VTGG  GIG+ +C  F + G  V F  +  +   D AKE   +       D  D
Sbjct: 3   RGVI--VTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFY--FHGDVAD 58
Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           P+ +          K+ V+  +    RID+LVNNA
Sbjct: 59  PLTL----------KKFVEYAMEKLQRIDVLVNNA 83

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           S  L G VAL+TG  SG G  +   FA+ GA V         DK   E +      +  D
Sbjct: 4   SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIV----DRDKAGAERV----AGEIGD 55
Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
           A   +A++AD+  + +    V+  ++ + ++DILVNNA 
Sbjct: 56  A--ALAVAADISKEADVDAAVEAALSKFGKVDILVNNAG 92

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L   VALVT    GIG A+    AQ+GA V  +  + QE+ D   T+  L+     +   
Sbjct: 12  LENKVALVTASTDGIGLAIARRLAQDGAHVVVSS-RKQENVD--RTVATLQ----GEGLS 64
Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
                  +G  E+ +R+V   VN +  +DILV+NAA     G++ D  E
Sbjct: 65  VTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATE 113

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 9/110 (8%)
Query: 27  FTSPDYTPSNKLRG-MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLE 85
           F    Y P   L    + LVTG   GIGR     +A+ GATV          ++ ++  +
Sbjct: 19  FQGXHYQPKQDLLNDRIILVTGASDGIGREAAXTYARYGATVILL------GRNEEKLRQ 72
Query: 86  MLREAKTPDAKDPMAISADL--GFDENCKRVVDEVVNAYDRIDILVNNAA 133
           +         + P     DL     ENC+++   +V  Y R+D +++NA 
Sbjct: 73  VASHINEETGRQPQWFILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAG 122

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 6/108 (5%)
Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           V L+TGG  GIG A     A++G  VA  Y       D  E +  +REA        +A+
Sbjct: 27  VVLITGGSRGIGAASALLAARQGYAVAVNYASNSAAAD--EVVRQIREA----GGQALAV 80
Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
            AD+  +       + V     R+  LVNNA    +   V+ I   RL
Sbjct: 81  QADVAKEREVLAXFETVDAQLGRLSALVNNAGVVDQTTRVDGITLERL 128

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 28  TSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEML 87
           ++P       L G VA+VTG   GIG  +   FA++GATV    V       A E L+  
Sbjct: 201 STPPADWDKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDV-----DGAAEDLK-- 253
Query: 88  REAKTPDAKDPMAISADLGFDENCKRVVDEVVNAY-DRIDILVNNAA 133
              +  D     A++ D+  D+   ++   V   +  ++DILVNNA 
Sbjct: 254 ---RVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAG 297

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFT-YVKPQEDKDAKETLEMLREAKTPDAK 96
           L+G  A+VTG  SGIG A+    A+ GA V    + +P++ +  + TLE     K     
Sbjct: 2   LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVK----- 56
Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQY 136
               ++ADL   +  +  + +   A   +DILVNNA  Q+
Sbjct: 57  -AYYLNADLSDAQATRDFIAKAAEALGGLDILVNNAGIQH 95

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+  + LVTG   GIGR     +A+ GATV    +   E+K  +    +  E        
Sbjct: 13  LQNRIILVTGASDGIGREAALTYARYGATVIL--LGRNEEKLRRVAQHIADEQHV----Q 66
Query: 98  PMAISADL--GFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDID 145
           P   + DL     E C++V D +   Y R+D +++NA    E G   + D
Sbjct: 67  PQWFTLDLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPXSEQD 116

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
           G +ALVTG   GIGRA+    A  GA V  T       +   + L    +    +  DP 
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPA 64
Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           +I +          V++++   +  +DILVNNA
Sbjct: 65  SIES----------VLEKIRAEFGEVDILVNNA 87

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           V LVTG  SG GRA+       G TV  T  + +   D          A  PD  +  AI
Sbjct: 7   VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLV--------AAYPDRAE--AI 56
Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           S D+   E    V  +V+  Y R+D+LVNNA  + + G+ E+  E  L
Sbjct: 57  SLDVTDGERIDVVAADVLARYGRVDVLVNNAG-RTQVGAFEETTEREL 103

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
           G +ALVTG   GIGRA+    A  GA V  T       +   + L    +    +  DP 
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPA 64
Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           +I +          V++++   +  +DILVNNA
Sbjct: 65  SIES----------VLEKIRAEFGEVDILVNNA 87

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
           G +ALVTG   GIGRA+    A  GA V  T       +   + L    +    +  DP 
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPA 64
Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           +I +          V++++   +  +DILVNNA
Sbjct: 65  SIES----------VLEKIRAEFGEVDILVNNA 87

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           +ALVTG   GIGRA+    A  GA VA  Y       D           +    K     
Sbjct: 30  IALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVK----- 84
Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            AD+  +   + +   V+  + R+D+LVNNA
Sbjct: 85  -ADVSQESEVEALFAAVIERWGRLDVLVNNA 114

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           ++L G +A+VTG  SGIGRA    FA+EGA V  T       ++     E+  E      
Sbjct: 4   SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVT------ARNGNALAELTDEIAGGGG 57
Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDID 145
           +     + D+G +   + +V+  V  +  +D   NNA      G +  + 
Sbjct: 58  EAAAL-AGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLS 106

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Query: 42  VALVTGGDSGIGRAVCHCFAQEGATV-AFTYVKPQEDKDAKETLEMLREAKTPDAKDPMA 100
           VAL+TG  SGIGRA     A +G TV A    + + ++ A E +    +A        +A
Sbjct: 30  VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQA--------IA 81
Query: 101 ISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDI 144
           + AD+  +   +  V ++V  +  +DI+V NA        ++D+
Sbjct: 82  LEADVSDELQXRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDL 125

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK----------PQEDKDAKETL 84
           + KL G VA +TG   G GRA     A EGA +    +           P    D  ET+
Sbjct: 6   AGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETV 65
Query: 85  EMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            ++  A     +  +A   D    +  ++VVD+ V A  R+DI+V NA
Sbjct: 66  RLVEAAN----RRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANA 109

>pdb|3SC4|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase (A0qtm2 Homolog) Mycobacterium Thermoresistibile Length = 285

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 1/115 (0%)
Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           S  LRG    ++GG  GIG A+    A +GA VA      +       T+    +     
Sbjct: 4   SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA 63
Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
               + I  D+   +     V + V  +  IDI VNNA+     GS+E++   R 
Sbjct: 64  GGQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNAS-AINLGSIEEVPLKRF 117

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L G  A++TG  +GIG+ +   FA  GA+V  + +         + ++ L         
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-------GG 60
Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
              A   D+  ++    + D  ++   ++DILVNNA 
Sbjct: 61  QAFACRCDITSEQELSALADFAISKLGKVDILVNNAG 97

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
           G  A VTGG +G+G  +      +G  VA   ++      A  TLE   E   P+    M
Sbjct: 8   GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEA--EGSGPEV---M 62
Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
            +  D+   E  K   DEV   +  + IL NNA 
Sbjct: 63  GVQLDVASREGFKMAADEVEARFGPVSILCNNAG 96

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           VALVTG   GIG  V H  A +GATV    V     + + E  E   + K   A+  +  
Sbjct: 7   VALVTGASRGIGFEVAHALASKGATV----VGTATSQASAEKFENSXKEKGFKARGLVLN 62
Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            +D+   E+ +    E+      IDILVNNA
Sbjct: 63  ISDI---ESIQNFFAEIKAENLAIDILVNNA 90

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           + LVTG   GIGR     +A+ GATV          ++ ++  ++         + P   
Sbjct: 12  IILVTGASDGIGREAAMTYARYGATVILL------GRNEEKLRQVASHINEETGRQPQWF 65
Query: 102 SADL--GFDENCKRVVDEVVNAYDRIDILVNNAA 133
             DL     ENC+++   +V  Y R+D +++NA 
Sbjct: 66  ILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAG 99

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 15/111 (13%)
Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLE-----MLREAKTPDAK 96
           VA+VTGG SGIG A      + GA VAF     +  + A+  L          A   D  
Sbjct: 10  VAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVL 69
Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDES 147
           D + + A   F E C+R +           ILVNNA +       E  DE+
Sbjct: 70  DALQVRA---FAEACERTLGCA-------SILVNNAGQGRVSTFAETTDEA 110

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 9/98 (9%)
Query: 43  ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS 102
           A+VTG    IGRA+     Q G  V   Y        A+  + +  E     +   +   
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVIHY-----HNSAEAAVSLADELNKERSNTAVVCQ 80
Query: 103 ADLG----FDENCKRVVDEVVNAYDRIDILVNNAAEQY 136
           ADL        +C+ +++    A+ R D+LVNNA+  Y
Sbjct: 81  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFY 118

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 18/97 (18%)
Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           VA+VTGG SGIG AV     + GA V    +  + D +  +  ++               
Sbjct: 16  VAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKI--------------- 60
Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNAA-EQYE 137
             D+  +E  K  V++    Y RIDILVNNA  EQY 
Sbjct: 61  --DVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYS 95

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 9/98 (9%)
Query: 43  ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS 102
           A+VTG    IGRA+     Q G  V   Y        A+  + +  E     +   +   
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVIHY-----HNSAEAAVSLADELNKERSNTAVVXQ 80
Query: 103 ADLG----FDENCKRVVDEVVNAYDRIDILVNNAAEQY 136
           ADL        +C+ +++    A+ R D+LVNNA+  Y
Sbjct: 81  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFY 118

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 9/98 (9%)
Query: 43  ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS 102
           A+VTG    IGRA+     Q G  V   Y        A+  + +  E     +   +   
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVIHY-----HNSAEAAVSLADELNKERSNTAVVXQ 80
Query: 103 ADLG----FDENCKRVVDEVVNAYDRIDILVNNAAEQY 136
           ADL        +C+ +++    A+ R D+LVNNA+  Y
Sbjct: 81  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFY 118

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 9/98 (9%)
Query: 43  ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS 102
           A+VTG    IGRA+     Q G  V   Y        A+  + +  E     +   +   
Sbjct: 6   AVVTGAAKRIGRAIAVKLHQTGYRVVIHY-----HNSAEAAVSLADELNKERSNTAVVXQ 60
Query: 103 ADLG----FDENCKRVVDEVVNAYDRIDILVNNAAEQY 136
           ADL        +C+ +++    A+ R D+LVNNA+  Y
Sbjct: 61  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFY 98

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 9/98 (9%)
Query: 43  ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS 102
           A+VTG    IGRA+     Q G  V   Y        A+  + +  E     +   +   
Sbjct: 6   AVVTGAAKRIGRAIAVKLHQTGYRVVIHY-----HNSAEAAVSLADELNKERSNTAVVXQ 60
Query: 103 ADLG----FDENCKRVVDEVVNAYDRIDILVNNAAEQY 136
           ADL        +C+ +++    A+ R D+LVNNA+  Y
Sbjct: 61  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFY 98

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 9/98 (9%)
Query: 43  ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS 102
           A+VTG    IGRA+     Q G  V   Y        A+  + +  E     +   +   
Sbjct: 6   AVVTGAAKRIGRAIAVKLHQTGYRVVIHY-----HNSAEAAVSLADELNKERSNTAVVCQ 60
Query: 103 ADLG----FDENCKRVVDEVVNAYDRIDILVNNAAEQY 136
           ADL        +C+ +++    A+ R D+LVNNA+  Y
Sbjct: 61  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFY 98

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 9/98 (9%)
Query: 43  ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS 102
           A+VTG    IGRA+     Q G  V   Y        A+  + +  E     +   +   
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVIHY-----HNSAEAAVSLADELNKERSNTAVVCQ 80
Query: 103 ADLG----FDENCKRVVDEVVNAYDRIDILVNNAAEQY 136
           ADL        +C+ +++    A+ R D+LVNNA+  Y
Sbjct: 81  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFY 118

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 32  YTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAK 91
           Y  S  L+G VALVTG   GIG+A+     + GA V  T       +   ETL+      
Sbjct: 19  YFQSMSLQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLK------ 72
Query: 92  TPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
             +  +   +  D+  DE+    ++ +     +  I+VNNA 
Sbjct: 73  -ANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAG 113

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 7/104 (6%)
Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           + L G VA+VTG   GIG A+       GA V  T       +D ++   + RE      
Sbjct: 25  SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTA------RDVEKLRAVEREI-VAAG 77
Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECG 139
            +  + + DL   +        V+ A+ R D+LVNNA   +  G
Sbjct: 78  GEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGG 121

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 21/107 (19%)
Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G  ALVTG   G+GRA+    A  GA +      P       +T++  R        D
Sbjct: 24  LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSR---VAQTVQEFRNV----GHD 76
Query: 98  PMAISADLGFDENCKRVVDEVVNAYDR-------IDILVNNAAEQYE 137
             A++    FD   +    E++ A+ R       +DILVNNA  Q+ 
Sbjct: 77  AEAVA----FDVTSE---SEIIEAFARLDEQGIDVDILVNNAGIQFR 116

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 38  LRGMVALVTG--GDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           L+G V +VTG  G  G+G       A+ GA VA TY      + A+E ++ L +     A
Sbjct: 18  LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITY--ASRAQGAEENVKELEKTYGIKA 75
Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECG 139
           K   A    +   E+C+++V +VV  + +ID  + NA    + G
Sbjct: 76  K---AYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSG 116

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	149
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	7e-63
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	1e-61
1xhl_A	297	Short-chain dehydrogenase/reductase family member	4e-38
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	6e-31
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	5e-30
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	2e-29
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	5e-29
1xkq_A	280	Short-chain reductase family member (5D234); parra	2e-28
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	4e-28
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	8e-28
1spx_A	278	Short-chain reductase family member (5L265); paral	2e-27
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	4e-27
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	7e-27
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	6e-26
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	8e-26
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	8e-26
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	1e-25
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	1e-25
3imf_A	257	Short chain dehydrogenase; structural genomics, in	1e-25
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	1e-25
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	1e-25
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	2e-25
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-25
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-25
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	3e-25
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	3e-25
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	3e-25
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	3e-25
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	4e-25
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	4e-25
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	4e-25
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	6e-25
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	6e-25
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	6e-25
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	7e-25
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	7e-25
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	7e-25
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	1e-24
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-24
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	2e-24
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	2e-24
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-24
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	2e-24
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	3e-24
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	3e-24
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	3e-24
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	3e-24
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	3e-24
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	3e-24
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	4e-24
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	4e-24
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	4e-24
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	4e-24
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	4e-24
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	5e-24
3rih_A	293	Short chain dehydrogenase or reductase; structural	5e-24
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	6e-24
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	6e-24
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	7e-24
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	7e-24
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	8e-24
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	1e-23
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	1e-23
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	1e-23
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	1e-23
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	2e-23
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	2e-23
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	2e-23
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	2e-23
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	2e-23
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	2e-23
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	3e-23
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	3e-23
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	3e-23
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	3e-23
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	3e-23
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	4e-23
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	4e-23
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	4e-23
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	4e-23
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	5e-23
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-23
1xq1_A	266	Putative tropinone reducatse; structural genomics,	5e-23
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	5e-23
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	6e-23
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	6e-23
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	6e-23
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	1e-22
4dqx_A	277	Probable oxidoreductase protein; structural genomi	1e-22
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	2e-22
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	2e-22
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	2e-22
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	2e-22
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	3e-22
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	4e-22
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	4e-22
3cxt_A	291	Dehydrogenase with different specificities; rossma	5e-22
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	6e-22
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	6e-22
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	6e-22
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	7e-22
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	8e-22
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	1e-21
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	1e-21
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	1e-21
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	2e-21
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	2e-21
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	2e-21
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	2e-21
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	2e-21
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	3e-21
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	4e-21
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	5e-21
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	5e-21
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	6e-21
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	6e-21
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	6e-21
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	6e-21
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	7e-21
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	8e-21
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	8e-21
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	1e-20
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-20
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	1e-20
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	1e-20
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	1e-20
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	2e-20
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	2e-20
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-20
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	3e-20
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	4e-20
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	5e-20
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	7e-20
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	1e-19
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	1e-19
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	1e-19
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	3e-19
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	3e-19
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	3e-19
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	4e-19
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	4e-19
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	5e-19
4e4y_A	244	Short chain dehydrogenase family protein; structur	5e-19
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	6e-19
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	3e-18
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	6e-18
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	7e-18
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	1e-17
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	7e-17
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	3e-16
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	5e-16
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	2e-15
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	2e-15
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	3e-15
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	5e-15
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	7e-15
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	8e-15
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	8e-15
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	2e-14
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	2e-14
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	3e-14
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	5e-14
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	5e-14
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	5e-14
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-13
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	2e-13
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-13
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	3e-13
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	3e-13
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	3e-13
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	7e-13
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	2e-12
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	4e-12
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	5e-12
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	6e-12
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	1e-11
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-11
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	5e-11
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	2e-11
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	4e-11
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	6e-11
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	6e-10
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	7e-10
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	4e-09
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	5e-09
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	1e-07
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	1e-07
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	5e-07
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	8e-07
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	2e-06
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	1e-05
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	1e-05
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	3e-05
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	4e-05
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	5e-05
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	7e-05
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	7e-05
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	7e-05
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	7e-05
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	8e-05
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	8e-05
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	2e-04
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	3e-04
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	4e-04
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	7e-04

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  193 bits (493), Expect = 7e-63
 Identities = 61/143 (42%), Positives = 85/143 (59%), Gaps = 6/143 (4%)

Query: 7   PPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGAT 66
           P Q Q+ QPG E +MNP+PQF  P+Y  S KL+G   L+TGGDSGIGRAV   FA+EGA 
Sbjct: 14  PAQHQNKQPGIESLMNPLPQFEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGAN 73

Query: 67  VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRID 126
           +A  Y+   E+ DA ET + + +         + +  DL  +++CK +V E V     ++
Sbjct: 74  IAIAYLD--EEGDANETKQYVEKEG----VKCVLLPGDLSDEQHCKDIVQETVRQLGSLN 127

Query: 127 ILVNNAAEQYECGSVEDIDESRL 149
           ILVNN A+QY    +E I   +L
Sbjct: 128 ILVNNVAQQYPQQGLEYITAEQL 150

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  190 bits (485), Expect = 1e-61
 Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 6/143 (4%)

Query: 7   PPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGAT 66
           P QKQ   PG +  M P+P      Y  S +L+   ALVTGGDSGIGRA    +A+EGA 
Sbjct: 17  PKQKQP-APGVQAKMTPVPDCGEKSYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGAD 75

Query: 67  VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRID 126
           VA  Y+ P E++DA++   ++ E      +  + +  DL  +   + +V +   A   +D
Sbjct: 76  VAINYL-PAEEEDAQQVKALIEEC----GRKAVLLPGDLSDESFARSLVHKAREALGGLD 130

Query: 127 ILVNNAAEQYECGSVEDIDESRL 149
           IL   A +Q     ++D+   + 
Sbjct: 131 ILALVAGKQTAIPEIKDLTSEQF 153

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  130 bits (328), Expect = 4e-38
 Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 4/120 (3%)

Query: 16  GKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ 75
           G  H  +       P  +   +  G   ++TG  +GIGR+    FA+EGA V  T     
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGR--- 58

Query: 76  EDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQ 135
            +   +ET + + +A  P A+   A+ AD+        +++  +  + +IDILVNNA   
Sbjct: 59  NEDRLEETKQQILKAGVP-AEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGAN 117

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  110 bits (278), Expect = 6e-31
 Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 6/114 (5%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
            +      +V G    IGRA    FAQEGA V  TY      + A   +  + +      
Sbjct: 4   QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNG--AAEGAATAVAEIEKL----G 57

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
           +  +AI ADL      +  +    + +  I  LV+ A       ++ ++DE+  
Sbjct: 58  RSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFW 111

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  108 bits (272), Expect = 5e-30
 Identities = 19/114 (16%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 33  TPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKT 92
           +    L   V +++G    +G  +    A++GA +       +     ++  + + +   
Sbjct: 4   SMGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVE---RLEDVAKQVTDT-- 58

Query: 93  PDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
              +  +++  D+  D     +VDE + AY R+D+++NNA          +   
Sbjct: 59  --GRRALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTF 110

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  106 bits (267), Expect = 2e-29
 Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 6/112 (5%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
              L+G   L+TG   GIG A    FA+ GA V     K     +  ET+  +R      
Sbjct: 2   FPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRK--APANIDETIASMRAD---- 55

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
             D    +ADL   E C+++VDE V  +  ID+L+NNA        + +ID+
Sbjct: 56  GGDAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDD 107

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  105 bits (265), Expect = 5e-29
 Identities = 21/114 (18%), Positives = 44/114 (38%), Gaps = 5/114 (4%)

Query: 33  TPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKT 92
           T  + L+  V ++ GG   +G      FA E   +   Y + ++   A +  + L E + 
Sbjct: 4   TKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDEL-EDQG 62

Query: 93  PDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
                     +DL  +E   ++ D     + ++DI +N    +     + +  E
Sbjct: 63  AKV---ALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVG-KVLKKPIVETSE 112

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  104 bits (262), Expect = 2e-28
 Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 4/97 (4%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
            +      ++TG  +GIGR     FAQEGA V  T    +     +ET +++ ++     
Sbjct: 2   PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSER---LEETRQIILKSGVS-E 57

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           K   ++ AD+  ++   ++++  +  + +ID+LVNNA
Sbjct: 58  KQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNA 94

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  103 bits (260), Expect = 4e-28
 Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 9/115 (7%)

Query: 22  NPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAK 81
           +     +S      + +    A+VTG    IGRA+     Q G  V   Y    E   A 
Sbjct: 5   HHHHHHSSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAE--AAV 62

Query: 82  ETLEMLREAKTPDAKDPMAISADL----GFDENCKRVVDEVVNAYDRIDILVNNA 132
              + L + ++  A   +   ADL        +C+ +++    A+ R D+LVNNA
Sbjct: 63  SLADELNKERSNTA---VVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNA 114

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  102 bits (257), Expect = 8e-28
 Identities = 35/120 (29%), Positives = 50/120 (41%), Gaps = 7/120 (5%)

Query: 28  TSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEML 87
            S        L   VALVT    GIG A+    AQ+GA V  +  K +       T+  L
Sbjct: 2   ASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQEN---VDRTVATL 58

Query: 88  REAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDES 147
           +                +G  E+ +R+V   VN +  +DILV+NAA     G++ D  E 
Sbjct: 59  QGE----GLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEE 114

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  102 bits (256), Expect = 2e-27
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 4/97 (4%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
            +    VA++TG  +GIGRA    FA+EGA V  T    +     +ET + +  A     
Sbjct: 2   TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAER---LEETRQQILAAGVS-E 57

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           ++  ++ AD+  D     ++   +  + ++DILVNNA
Sbjct: 58  QNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNA 94

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  100 bits (250), Expect = 4e-27
 Identities = 13/111 (11%), Positives = 35/111 (31%), Gaps = 19/111 (17%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           +     +V GG   +G A+   F + G TV    +   +                  A  
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND-----------------QADS 43

Query: 98  PMAISADLGFDENCKRVVDEVVNA--YDRIDILVNNAAEQYECGSVEDIDE 146
            + +  +  + E  + ++++  ++    ++D +   A       +      
Sbjct: 44  NILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFV 94

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  100 bits (251), Expect = 7e-27
 Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 11/114 (9%)

Query: 33  TPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKT 92
               +  G V +VTGG  GIG  +   F   GA V        ++   +   + L  A  
Sbjct: 2   ATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDK---DESGGRALEQELPGA-- 56

Query: 93  PDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
                 + I  D+  +++ K +V E +  + R+D +VNNA         E+   
Sbjct: 57  ------VFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSA 104

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 97.4 bits (243), Expect = 6e-26
 Identities = 14/112 (12%), Positives = 27/112 (24%), Gaps = 15/112 (13%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           +        LV GG   +G      F      VA   V   E+  A   ++M        
Sbjct: 2   AASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKM-------- 53

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
                  +       +        +    ++D ++  A       +      
Sbjct: 54  -------TDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLF 98

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 97.6 bits (244), Expect = 8e-26
 Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 6/98 (6%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
              L G V ++TG  +G+G+++   FA E A V   Y   ++  +A   LE +++     
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKED--EANSVLEEIKKV---- 55

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             + +A+  D+  + +   +V   +  + ++D+++NNA
Sbjct: 56  GGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNA 93

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 97.3 bits (243), Expect = 8e-26
 Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           S K  G V LVTG    IG A     A+EG  +A   +  +     ++    +RE     
Sbjct: 2   SKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREA---LEKAEASVREK---- 54

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
             +  +   D+  +E     VD VV  + +ID L NNA  Q     V+D   
Sbjct: 55  GVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPS 106

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 97.6 bits (244), Expect = 1e-25
 Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 4/109 (3%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
            +    LVTGG SGIG+ V       GA+V      P +   A + L    EA   +   
Sbjct: 9   FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQEL----EALGANGGA 64

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
                 D+  ++   R VD V   + R+  +V+ A      G +  +D 
Sbjct: 65  IRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDS 113

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 96.8 bits (242), Expect = 1e-25
 Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 24  IPQFTSPDYTP-SNKLRGMVALVTGG-DSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAK 81
           +    +P        L+G V LVT    +GIG         EGA V  +    +      
Sbjct: 5   MNLSEAPKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERR---LG 61

Query: 82  ETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           ET + L +          A+  D+   E    ++ + V    R+D+LVNNA
Sbjct: 62  ETRDQLADLGLGRV---EAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNA 109

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 96.8 bits (242), Expect = 1e-25
 Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 7/99 (7%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           SN ++  V ++TGG SG+G+ +   FA+EGA V  T    ++    +E    + +     
Sbjct: 1   SNAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEK---LEEAKLEIEQF-PGQ 56

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
               + +  D+   ++ +++++++   + RIDIL+NNAA
Sbjct: 57  I---LTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAA 92

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 96.9 bits (242), Expect = 1e-25
 Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 9/106 (8%)

Query: 31  DYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREA 90
           + T         A++TGG   IG ++     Q+G  V   Y   +    A+  +  L  A
Sbjct: 2   NETSHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEG--AAQRLVAELNAA 59

Query: 91  KTPDAKDPMAISADLGFDE----NCKRVVDEVVNAYDRIDILVNNA 132
           +   A   +    DL         C+ ++D    A+ R D+LVNNA
Sbjct: 60  RAGSA---VLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNA 102

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 97.3 bits (243), Expect = 1e-25
 Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 10/134 (7%)

Query: 13  TQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYV 72
           TQP  E   + IP    P    S  L G VALVTG   GIGR +     + G  V   Y 
Sbjct: 5   TQPRGESKYDAIPG---PLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYA 61

Query: 73  KPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              E   A+E +  + +    DA     + A++G  E+  R+ +E V  + ++DI+ +N+
Sbjct: 62  NSTE--SAEEVVAAI-KKNGSDA---ACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNS 115

Query: 133 AEQYECGSVEDIDE 146
                 G V+D+  
Sbjct: 116 G-VVSFGHVKDVTP 128

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 96.5 bits (241), Expect = 2e-25
 Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 7/119 (5%)

Query: 28  TSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEML 87
            + +     +L G VALVTG   GIG AV     + GA V   Y    +  DA++ +  +
Sbjct: 6   NASETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTK--DAEKVVSEI 63

Query: 88  REAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
            +A   DA   +AI AD+       ++ D+ V  +  +DI V+N+      G ++D+ E
Sbjct: 64  -KALGSDA---IAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSG-VVSFGHLKDVTE 117

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 96.1 bits (240), Expect = 3e-25
 Identities = 39/114 (34%), Positives = 53/114 (46%), Gaps = 7/114 (6%)

Query: 33  TPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKT 92
             S  L G  A VTGG  GIG A+    A EGA VA TYV   E   A+  +  + +A  
Sbjct: 24  MTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAE--RAQAVVSEIEQA-- 79

Query: 93  PDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
                 +AI AD    E  ++ + E V A   +DILVN+A   +    +E+   
Sbjct: 80  --GGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAG-IWHSAPLEETTV 130

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 96.2 bits (240), Expect = 3e-25
 Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 6/122 (4%)

Query: 25  PQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETL 84
             F S          G +ALVTGG +G+GR +    + EG +V  T  +P          
Sbjct: 18  LYFQSMMAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDV---LDAAA 74

Query: 85  EMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDI 144
             +            A+  D+G  +    +   V   + R+D+LVNNA        +E++
Sbjct: 75  GEIGGRTGNIV---RAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEV 131

Query: 145 DE 146
             
Sbjct: 132 TF 133

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 95.7 bits (239), Expect = 3e-25
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 1/99 (1%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
            N+LR  +ALVTG  SGIGRAV    A EGATVA   +     ++    L      + P 
Sbjct: 2   QNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPP 61

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRI-DILVNNA 132
             +  A  AD+      + ++++V   + R   ++V+ A
Sbjct: 62  RGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCA 100

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 95.6 bits (239), Expect = 3e-25
 Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 7/97 (7%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L G  A++TG  +GIG+ +   FA  GA+V  + +       A   ++ +++       
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADA---ANHVVDEIQQL----GG 60

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
              A   D+  ++    + D  ++   ++DILVNNA 
Sbjct: 61  QAFACRCDITSEQELSALADFAISKLGKVDILVNNAG 97

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 96.1 bits (240), Expect = 3e-25
 Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 10/110 (9%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           KL G VAL+TGG SG+GRA+   F  EGA VA             E L  L  A   +A 
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSA-------ERLRELEVAHGGNA- 53

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
             + +  D+   ++ KR  +  + A+ +ID L+ NA       ++ D+ E
Sbjct: 54  --VGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPE 101

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 96.1 bits (240), Expect = 3e-25
 Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 8/127 (6%)

Query: 21  MNPIPQFTSP-DYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKD 79
           M P    TS      S  L G VAL TG   GIGR +     + GA+V   Y    +   
Sbjct: 1   MAPSADITSSGPSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSK--A 58

Query: 80  AKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECG 139
           A+E +  L +         +AI AD+        + D+ V+ +  +D +++N+       
Sbjct: 59  AEEVVAEL-KKLGAQG---VAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSG-MEVWC 113

Query: 140 SVEDIDE 146
              ++ +
Sbjct: 114 DELEVTQ 120

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 95.2 bits (238), Expect = 4e-25
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 9/98 (9%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           + +L+  +A++TGG +GIGRA+   FA EGA +A   +       A E    +R      
Sbjct: 2   TQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADL-----VPAPEAEAAIRNL---- 52

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            +  + +  D+    + +    +V++ + R DILVNNA
Sbjct: 53  GRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNA 90

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 95.4 bits (238), Expect = 4e-25
 Identities = 17/119 (14%), Positives = 32/119 (26%), Gaps = 19/119 (15%)

Query: 28  TSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEML 87
            S    P         LV GG   +G  V   F  +         +   + D        
Sbjct: 10  HSSGLVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH------- 62

Query: 88  REAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
                       + +     +E  K V++++ +   ++D  V  A       +  D   
Sbjct: 63  ------------SFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFL 109

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 95.7 bits (239), Expect = 4e-25
 Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 6/105 (5%)

Query: 28  TSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEML 87
           T   Y    +L G  AL+TG   GIG  +   FA  GA +  +     E          L
Sbjct: 8   TDDRYAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSE---LDAARRAL 64

Query: 88  REAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            E    D      ++ DL   +    +      A+  +D+LVNNA
Sbjct: 65  GEQFGTDV---HTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNA 106

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score = 95.3 bits (238), Expect = 6e-25
 Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 7/110 (6%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            + G VA++TG  SGIG A+   FA+EGA +     +        E    L+E       
Sbjct: 4   GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDR---LHEAARSLKEKFGVRV- 59

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
             + ++ D+   E    VV+ V +++   DILVNNA       ++ +  +
Sbjct: 60  --LEVAVDVATPEGVDAVVESVRSSFGGADILVNNAG-TGSNETIMEAAD 106

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 94.9 bits (237), Expect = 6e-25
 Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 6/95 (6%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
            +   ALVTG   G+G+A     A+ G  +   Y + ++   A ET E + +        
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKK--AALETAEEIEKL----GVK 55

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            + + A++G     K +  ++   + R+D+ VNNA
Sbjct: 56  VLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNA 90

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 95.4 bits (238), Expect = 6e-25
 Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 1/115 (0%)

Query: 34  PSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTP 93
            S  LRG    ++GG  GIG A+    A +GA VA      +       T+    +    
Sbjct: 3   GSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEE 62

Query: 94  DAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR 148
                + I  D+   +     V + V  +  IDI VNNA+     GS+E++   R
Sbjct: 63  AGGQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINL-GSIEEVPLKR 116

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 94.9 bits (237), Expect = 7e-25
 Identities = 35/97 (36%), Positives = 44/97 (45%), Gaps = 13/97 (13%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
               G   LVTGG  GIGRA+   FA+EGA VA   +      + KE  E +  A     
Sbjct: 2   GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDL----RPEGKEVAEAIGGA----- 52

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                   DL  +    R V+E   A  R+D+LVNNA
Sbjct: 53  ----FFQVDLEDERERVRFVEEAAYALGRVDVLVNNA 85

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 94.9 bits (237), Expect = 7e-25
 Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 5/118 (4%)

Query: 29  SPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLR 88
           +   +P+ +    V L+TGG SG+GRA     A EGA ++   V  +     + +   + 
Sbjct: 2   TATSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEG---LEASKAAVL 58

Query: 89  EAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
           E       + +   AD+  +   +  V      + RID   NNA  + +    E    
Sbjct: 59  ETAPDA--EVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTA 114

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 95.0 bits (237), Expect = 7e-25
 Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 5/98 (5%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           ++ + G VALVTG   GIGRA       +GA VA      +      +    L E   P 
Sbjct: 2   AHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEA---GVQCKAALHEQFEPQ 58

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               + I  D+   +  +    +VV+ + R+DILVNNA
Sbjct: 59  --KTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNA 94

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 94.6 bits (236), Expect = 1e-24
 Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 6/114 (5%)

Query: 19  HVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDK 78
           H  + +    +    P +     VA VTGG  G+G A+       G  VA ++ +   + 
Sbjct: 4   HHHHHMGTLEAQTQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSE--RND 61

Query: 79  DAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                L   R+A     +D  A + D+   E+C+R  ++V+  + ++D+L+NNA
Sbjct: 62  HVSTWLMHERDA----GRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNA 111

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 93.8 bits (234), Expect = 2e-24
 Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 6/116 (5%)

Query: 17  KEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQE 76
             H  + +   T   Y  S      VA+VTG   GIG A+    A +G TV   Y     
Sbjct: 4   HHHHSSGVDLGTENLYFQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAA 63

Query: 77  DKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              A+E    + EA    A   +   AD+      +R+      A+  +D+LVNNA
Sbjct: 64  --AAEEVAGKI-EAAGGKA---LTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNA 113

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 93.7 bits (234), Expect = 2e-24
 Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 7/96 (7%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L   VA+VTGG   IG A     A+ GA V    +       A + +E LR        
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAM---ATKAVEDLRME----GH 62

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           D  ++  D+   E+ +  V  V     R+DILV  A
Sbjct: 63  DVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACA 98

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 94.1 bits (235), Expect = 2e-24
 Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 8/97 (8%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+G  ALVTGG  GIG A+    A  GA V       +E     E LE+ RE       +
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKE---LDECLEIWREK----GLN 71

Query: 98  PMAISADLGFDENCKRVVDEVVNAYD-RIDILVNNAA 133
                 DL       +++  V + +D +++ILVNNA 
Sbjct: 72  VEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAG 108

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 93.4 bits (233), Expect = 2e-24
 Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 5/117 (4%)

Query: 31  DYTPSNK-LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRE 89
           DY+   + L+G V LVTG   GIG A    +A  GA+V              E  + ++ 
Sbjct: 4   DYSAHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEAS---LAEVSDQIKS 60

Query: 90  AKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
           A  P     +A++ +    +  + +   V + + R+D L++NA+       +E + +
Sbjct: 61  AGQP-QPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPD 116

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 93.4 bits (233), Expect = 2e-24
 Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 10/97 (10%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
              +G  A+V GG  G+G A      + GA V  T          +  +  +RE   P  
Sbjct: 4   GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRN-------ESNIARIREEFGPRV 56

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               A+ +D+        +          ID+L  NA
Sbjct: 57  ---HALRSDIADLNEIAVLGAAAGQTLGAIDLLHINA 90

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 93.4 bits (233), Expect = 3e-24
 Identities = 27/95 (28%), Positives = 35/95 (36%), Gaps = 5/95 (5%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L   VA+VTGG SGIG A      + GA VAF     +     +     LR+        
Sbjct: 6   LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGER---LRAAESALRQRFPGA--R 60

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             A   D+      +   +          ILVNNA
Sbjct: 61  LFASVCDVLDALQVRAFAEACERTLGCASILVNNA 95

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 93.8 bits (234), Expect = 3e-24
 Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 7/111 (6%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           ++L G +A+VTG  SGIGRA    FA+EGA V  T           E  + +        
Sbjct: 4   SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNA---LAELTDEIAGG----G 56

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
            +  A++ D+G +   + +V+  V  +  +D   NNA      G +  +  
Sbjct: 57  GEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSV 107

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 93.8 bits (234), Expect = 3e-24
 Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 14/120 (11%)

Query: 18  EHVMNPIPQFTSPDYTPSN----KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK 73
              + P+P   +P  + +      L+G VA VTG   GIG AV   +AQ GA VA  Y  
Sbjct: 9   NKELGPLPT-KAPTLSKNVLDLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNS 67

Query: 74  PQEDKDAKETLEML-REAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              D+ A+   +     +K        A   ++   ++ +  + +    +  ID+ V NA
Sbjct: 68  HPADEKAEHLQKTYGVHSK--------AYKCNISDPKSVEETISQQEKDFGTIDVFVANA 119

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 92.9 bits (232), Expect = 3e-24
 Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 8/109 (7%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
             VA+VTG  SG G A+   F   G  VA   +  +     +ET      A        +
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAET---LEETARTHWHAYADKV---L 55

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNA--AEQYECGSVEDIDE 146
            + AD+  + +    +   +  +  ID+LVNNA      E G +     
Sbjct: 56  RVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPV 104

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 93.9 bits (234), Expect = 3e-24
 Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 4/101 (3%)

Query: 34  PSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTP 93
               L+G VA+VTGG +GIG+A+     + G+ V     K +     K   + L+    P
Sbjct: 12  APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLER---LKSAADELQANLPP 68

Query: 94  DAK-DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
             +   + I  ++  +E    +V   ++ + +I+ LVNN  
Sbjct: 69  TKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGG 109

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 93.0 bits (232), Expect = 3e-24
 Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 7/96 (7%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            L   VA+VTG  +GIGRA+   FA+ GA+V  T +K    + A+     +R+A      
Sbjct: 9   HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLK---SEGAEAVAAAIRQA----GG 61

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             + +  ++  +++ + V+   ++ + +I +LVNNA
Sbjct: 62  KAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNA 97

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 93.4 bits (233), Expect = 4e-24
 Identities = 29/131 (22%), Positives = 51/131 (38%), Gaps = 20/131 (15%)

Query: 3   SNNQPPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQ 62
            ++    +  TQ      M+ +  F          L G  AL+TG  +GIG+ V   +A+
Sbjct: 6   HHHMGTLEAQTQGPGS--MSVLDLF---------DLSGKRALITGASTGIGKKVALAYAE 54

Query: 63  EGATVAFTYVKPQEDKDAKETLEML-REAKTPDAKDPMAISADLGFDENCKRVVDEVVNA 121
            GA VA         +   + +  +  +A          I  D+   +  + ++D++   
Sbjct: 55  AGAQVAVAARHSDALQVVADEIAGVGGKAL--------PIRCDVTQPDQVRGMLDQMTGE 106

Query: 122 YDRIDILVNNA 132
              IDI V NA
Sbjct: 107 LGGIDIAVCNA 117

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 93.0 bits (232), Expect = 4e-24
 Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 7/98 (7%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           S +    V +VTG   GIG+A     A+EGA V    +  +    A+   + +       
Sbjct: 4   SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEA---AEAVAKQIVAD---- 56

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               ++++ D+   E+ K + D  +  +  ID LVNNA
Sbjct: 57  GGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNA 94

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 93.4 bits (233), Expect = 4e-24
 Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 6/97 (6%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
            +    VA+VTGG  GIG  +    A  G  +A T +   E       +  L        
Sbjct: 25  TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAE--GVAPVIAELSGL----G 78

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              + + ADL    + +  VD VV  + RID LVNNA
Sbjct: 79  ARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNA 115

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 93.0 bits (232), Expect = 4e-24
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 6/96 (6%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            L+G   +VTGG  GIGR +   FA+ GA VA       +       +  L +  +    
Sbjct: 7   DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTAD---IDACVADLDQLGSGKV- 62

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             + +  D+     C  +    V  +  ID++  NA
Sbjct: 63  --IGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANA 96

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 93.0 bits (232), Expect = 4e-24
 Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 8/95 (8%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G +ALVTGG  GIG+ +     + GA V       +   D    L    +        
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDC------- 79

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             AI ADL  +   +R+   +     R+DILVNNA
Sbjct: 80  -QAIPADLSSEAGARRLAQALGELSARLDILVNNA 113

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 93.4 bits (233), Expect = 5e-24
 Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 9/118 (7%)

Query: 19  HVMNPIPQFTSPDYT---PSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ 75
           +      +F SP      P N  +G VA +TGG +G+G+ +    +  GA       K  
Sbjct: 2   NTEALQSKFFSPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMD 61

Query: 76  EDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
                K T E +            AI  D+   +  +  V E++      +I++NNAA
Sbjct: 62  V---LKATAEQISSQTGNKV---HAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAA 113

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 93.5 bits (233), Expect = 5e-24
 Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 6/96 (6%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            L     LVTGG  GIGR +   FA+ GA VA     P+E          L E    +  
Sbjct: 38  DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRE---LSSVTAELGELGAGNVI 94

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               +  D+    +C      VV+A+  +D++  NA
Sbjct: 95  ---GVRLDVSDPGSCADAARTVVDAFGALDVVCANA 127

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 92.7 bits (231), Expect = 6e-24
 Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 1/112 (0%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            L G    +TG   GIG A+    A++GA VA        +     T+     A      
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR 148
             +A+  D+  ++  +  V   V+ +  IDILVNNA+  +      D    R
Sbjct: 63  QGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWL-RGTLDTPMKR 113

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 92.6 bits (231), Expect = 6e-24
 Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 11/112 (9%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           + +L   +A++TG  SGIG A    F  EGA V  T  +      A   +          
Sbjct: 24  TQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG-------GG 76

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
           A   + I AD        R+ ++V     RID+L  NA        + ++ E
Sbjct: 77  A---VGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAG-GGSMLPLGEVTE 124

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 92.6 bits (231), Expect = 7e-24
 Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 6/124 (4%)

Query: 26  QFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLE 85
              + +    +     V LVTGG  GIG AVC   A++G  V   Y   +E   A   + 
Sbjct: 12  DLGTENLYFQSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANRE--AADAVVA 69

Query: 86  MLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDID 145
            + E+      + +AI  D+G   +   +   V   + R+D LVNNA        V+++ 
Sbjct: 70  AITES----GGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMS 125

Query: 146 ESRL 149
             R+
Sbjct: 126 VERI 129

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 92.2 bits (230), Expect = 7e-24
 Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 7/109 (6%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+  V +VTG  SGIGRA+   FA   + V    +         + ++ LR       K+
Sbjct: 5   LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDR---LNQIVQELRGM----GKE 57

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
            + + AD+   ++ +  V      Y RID+L NNA        V ++ +
Sbjct: 58  VLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSD 106

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 92.6 bits (231), Expect = 8e-24
 Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 7/110 (6%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
                VAL+TG  SGIGRA     A +G TV        E    +E  + +  A      
Sbjct: 25  NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTE---VEEVADEIVGA----GG 77

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
             +A+ AD+  +   +  V ++V  +  +DI+V NA        ++D+  
Sbjct: 78  QAIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKP 127

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 91.9 bits (229), Expect = 1e-23
 Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 6/96 (6%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
                 AL+T G  G+G+ V      +G +V  TY    +    +   E  ++ +     
Sbjct: 4   GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHS--DTTAMETMKETYKDVEE---- 57

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               + AD+   E+  ++V+E ++ + +ID L+NNA
Sbjct: 58  RLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNA 93

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 91.4 bits (228), Expect = 1e-23
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 6/96 (6%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L+G  A+VTG   G+G+A+       GA +               T E  + A      
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPAST--SLDATAEEFKAAGI---- 55

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           + +    D+   E+ + +V   ++A+ RIDILVNNA
Sbjct: 56  NVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNA 91

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 91.0 bits (227), Expect = 1e-23
 Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 6/96 (6%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           KL+G V+LVTG   GIGRA+    A  G+TV  T       + AK   E +       A 
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTS---GERAKAVAEEIANKYGVKAH 60

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               +  +L  +E+  +  +E+ N  D IDILVNNA
Sbjct: 61  ---GVEMNLLSEESINKAFEEIYNLVDGIDILVNNA 93

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 91.4 bits (228), Expect = 1e-23
 Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 8/97 (8%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G  ALVTGG  GIG  +    A  GA+V       +E     + L   R         
Sbjct: 7   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKE---LNDCLTQWRSK----GFK 59

Query: 98  PMAISADLGFDENCKRVVDEVVNAYD-RIDILVNNAA 133
             A   DL      + +++ V N +  +++ILVNNA 
Sbjct: 60  VEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAG 96

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 91.5 bits (228), Expect = 2e-23
 Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 7/116 (6%)

Query: 17  KEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQE 76
             H M  +   T    +    L   VA+VTG   GIGRA+    A+ GA V  T      
Sbjct: 5   HHHHMGTLEAQTQGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATT--- 61

Query: 77  DKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           +  A+      ++A      +      ++        +V+  +  +  +++LVNNA
Sbjct: 62  EAGAEGIGAAFKQAGL----EGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNA 113

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 91.5 bits (228), Expect = 2e-23
 Identities = 32/123 (26%), Positives = 45/123 (36%), Gaps = 13/123 (10%)

Query: 23  PIPQFTSPDYTPSNK-------LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ 75
           P P     D  P+ +       LR  VA +TGG SGIG  +   F + G           
Sbjct: 3   PPPDVEGDDCLPAYRHLFCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLP 62

Query: 76  EDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQ 135
                      L  A        + +S D+         VD+ +  + RIDIL+N AA  
Sbjct: 63  R---VLTAARKLAGATGRRC---LPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGN 116

Query: 136 YEC 138
           + C
Sbjct: 117 FLC 119

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 91.2 bits (227), Expect = 2e-23
 Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 8/107 (7%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
           G V LVTG   GIG+++               V   E       L+ L+E          
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAP-----LKKLKEKYGDRF---F 53

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
            +  D+  D   K++V+  V  + +ID LV NA       +V +ID 
Sbjct: 54  YVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDV 100

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 90.7 bits (226), Expect = 2e-23
 Identities = 17/96 (17%), Positives = 32/96 (33%), Gaps = 12/96 (12%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            L     L+TG    +G        + G  V  +Y           ++  LR+A      
Sbjct: 24  TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRT------EHASVTELRQAGA---- 73

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             +A+  D   +      +D +      +  +V+NA
Sbjct: 74  --VALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNA 107

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 92.2 bits (229), Expect = 2e-23
 Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 1/116 (0%)

Query: 33  TPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKT 92
             + +L G    +TG   GIG+A+    A++GA +       Q       T+    E   
Sbjct: 38  PNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE 97

Query: 93  PDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR 148
                 +    D+  ++     V++ +  +  IDILVNNA+      +  D    R
Sbjct: 98  AVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISL-TNTLDTPTKR 152

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 90.6 bits (226), Expect = 2e-23
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 12/99 (12%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEML-REAKTP 93
           + +L G  ALVTG   GIG+A+    A +GATV  + +  +    AK     + ++A   
Sbjct: 1   TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEG---AKAAAASIGKKA--- 54

Query: 94  DAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                 AI+AD+    + K +  E+      IDILVNNA
Sbjct: 55  -----RAIAADISDPGSVKALFAEIQALTGGIDILVNNA 88

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 90.6 bits (226), Expect = 3e-23
 Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 8/98 (8%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           SN+L G VA++TGG  GIG A+   F +EGA V  T       + A +++    +     
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQI---- 56

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                    D   ++   ++ D    A+  +  LVNNA
Sbjct: 57  ----QFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNA 90

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 91.2 bits (227), Expect = 3e-23
 Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 29  SPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLR 88
            P  +        VALVTG  SGIG  +     +EG  V       +     + TL+ LR
Sbjct: 11  VPRGSHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEG---LRTTLKELR 67

Query: 89  EAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           EA      +    + D+      + +V  VV  Y  +D+LVNNA
Sbjct: 68  EA----GVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNA 107

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 90.7 bits (226), Expect = 3e-23
 Identities = 25/96 (26%), Positives = 36/96 (37%), Gaps = 6/96 (6%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
                  +VTGG+ GIG A     A  GA VA  Y       DA E  E + +      K
Sbjct: 11  SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRS---AADAVEVTEKVGKEFGVKTK 67

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              A   D+   +   + + ++      I  L+ NA
Sbjct: 68  ---AYQCDVSNTDIVTKTIQQIDADLGPISGLIANA 100

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 90.7 bits (226), Expect = 3e-23
 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 6/96 (6%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            L   +ALVTG   GIGRA+    A  GA VA  Y        A E +  +  A      
Sbjct: 25  PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAG--AADEVVAAIAAAGG---- 78

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           +  A+ AD+  +   + +   V+  + R+D+LVNNA
Sbjct: 79  EAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNA 114

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 90.8 bits (226), Expect = 3e-23
 Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 5/95 (5%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+G VA+VTG  SGIG  +    A +GA +           + ++    L          
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAA--EIEKVRAGLAAQHGVKV-- 57

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            +   ADL   E  + +VD  V    RIDILVNNA
Sbjct: 58  -LYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNA 91

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 90.7 bits (226), Expect = 4e-23
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 7/98 (7%)

Query: 37  KLRGMVALVTG--GDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
            L+G V +VTG  G  G+G       A+ GA VA TY    +   A+E ++ L +     
Sbjct: 17  SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQ--GAEENVKELEKTYGIK 74

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           AK   A    +   E+C+++V +VV  + +ID  + NA
Sbjct: 75  AK---AYKCQVDSYESCEKLVKDVVADFGQIDAFIANA 109

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 90.3 bits (225), Expect = 4e-23
 Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 12/113 (10%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEML-REAKTP 93
           S  L G VAL+TG  SG G  +   FA+ GA V            A+     +   A   
Sbjct: 4   SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAG---AERVAGEIGDAA--- 57

Query: 94  DAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
                +A++AD+  + +    V+  ++ + ++DILVNNA   ++  + E ++ 
Sbjct: 58  -----LAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEP 105

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 90.3 bits (225), Expect = 4e-23
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 12/98 (12%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEML-REAKTPD 94
            +L G   LVTG  SGIGRA    FA+EGA++     + +      E +  L  EA    
Sbjct: 2   GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERL---LAEAVAALEAEA---- 54

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               +A+ AD+   +  + V  E +  + R+  + + A
Sbjct: 55  ----IAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFA 88

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 89.8 bits (224), Expect = 4e-23
 Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 6/95 (6%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+G VALVTG   GIGRA+    A++GA V   Y   ++   A E ++ +++  +    D
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQ--KANEVVDEIKKLGS----D 55

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            +A+ AD+   E+   +V + V+ + ++DILVNNA
Sbjct: 56  AIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNA 90

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 90.4 bits (225), Expect = 5e-23
 Identities = 24/116 (20%), Positives = 45/116 (38%), Gaps = 6/116 (5%)

Query: 33  TPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKT 92
                +    A++TG  SGIG A+    A+ GA +        +  + +   + +    +
Sbjct: 18  LYFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPD--EIRTVTDEVAGLSS 75

Query: 93  PDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR 148
                 +   AD+        ++  V + +   DILVNNA  Q+    +ED    +
Sbjct: 76  GTV---LHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFV-EKIEDFPVEQ 127

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 89.8 bits (224), Expect = 5e-23
 Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 6/95 (6%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
                ALVTG   GIGR++    A+EG  VA  Y   +E   A+  +E ++        D
Sbjct: 2   KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKE--KAEAVVEEIKAKGV----D 55

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             AI A++   +  K ++ EVV+ +  +D+LVNNA
Sbjct: 56  SFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNA 90

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 90.3 bits (225), Expect = 5e-23
 Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 8/96 (8%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+    LVTGG  GIG A+   FA  GA +        E     E L   ++        
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYE---LNECLSKWQKK----GFQ 64

Query: 98  PMAISADLGFDENCKRVVDEVVNAYD-RIDILVNNA 132
                 D       ++++  V + +  ++DIL+NN 
Sbjct: 65  VTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNL 100

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 89.9 bits (224), Expect = 5e-23
 Identities = 22/96 (22%), Positives = 35/96 (36%), Gaps = 16/96 (16%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           + +  V ++TG   GIG  +   +      V  T    +   D                 
Sbjct: 25  RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPDI-------------- 70

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               ++ D+   E   R+V E +  + RID LVNNA
Sbjct: 71  --HTVAGDISKPETADRIVREGIERFGRIDSLVNNA 104

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 89.9 bits (224), Expect = 6e-23
 Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 6/95 (6%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           +   +A VTGG  GIG ++C    ++G  V              + LE  +        D
Sbjct: 11  MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSP--RRVKWLEDQKAL----GFD 64

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             A   ++G  ++ K+  D+V      ID+LVNNA
Sbjct: 65  FYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNA 99

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 89.5 bits (223), Expect = 6e-23
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 9/120 (7%)

Query: 31  DYTP-SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRE 89
            Y P  + L   + LVTG   GIGR     +A+ GATV       ++    ++    + E
Sbjct: 2   HYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEK---LRQVASHINE 58

Query: 90  AKTPDAKDPMAISADLGF--DENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDES 147
                 + P     DL     ENC+++   +   Y R+D +++NA    +   + + +  
Sbjct: 59  E---TGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQ 115

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 89.5 bits (223), Expect = 6e-23
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 5/94 (5%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
             VA+VTGG  GIGR +    A +G  +A   +  QE++ A ET++++  A     +  +
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQ-AAETIKLIEAA----DQKAV 56

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
            +  D+    N    +DE        D+LVNNA 
Sbjct: 57  FVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAG 90

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 89.1 bits (222), Expect = 1e-22
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 10/96 (10%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            L G  A+VTGG  GIG A+     + GATVA   +       A+  +  L         
Sbjct: 9   DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMA---AQAVVAGLENGG----- 60

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              A+  D+    +    + + ++A    D+L  NA
Sbjct: 61  --FAVEVDVTKRASVDAAMQKAIDALGGFDLLCANA 94

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 89.1 bits (222), Expect = 1e-22
 Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 13/116 (11%)

Query: 32  YTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEML-REA 90
           Y  S  L   V +VTGG SGIGRA    FA+ GA V    V       A      +  +A
Sbjct: 19  YFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDA---AVRVANEIGSKA 75

Query: 91  KTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
                     +  D+   ++ + +V++    + R+D+LVNNA      G+V  I E
Sbjct: 76  --------FGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTT-GNVVTIPE 122

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 88.3 bits (220), Expect = 2e-22
 Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 12/99 (12%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEML-REAKTPD 94
            +L G  AL+TG   GIGRA    + +EGATVA   +  +    A++    +   A    
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIER---ARQAAAEIGPAA---- 56

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
                A+  D+   ++    +   V     +DILVNNAA
Sbjct: 57  ----YAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAA 91

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 88.8 bits (221), Expect = 2e-22
 Identities = 31/106 (29%), Positives = 39/106 (36%), Gaps = 9/106 (8%)

Query: 29  SPDYTP--SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEM 86
           S    P  S+  R   A VTG  SGIG AV    A  G  V       +        ++ 
Sbjct: 11  SSGLVPRGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKN---VSAAVDG 67

Query: 87  LREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           LR A      D    S D+   +     V   V  +  I ILVN+A
Sbjct: 68  LRAA----GHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSA 109

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 88.4 bits (220), Expect = 2e-22
 Identities = 26/95 (27%), Positives = 36/95 (37%), Gaps = 9/95 (9%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+G  ALVTG  SGIG  +    A+ GA +           D    L  +          
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGF-----GDPAPALAEIARH----GVK 52

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            +   ADL      + +       +  +DILVNNA
Sbjct: 53  AVHHPADLSDVAQIEALFALAEREFGGVDILVNNA 87

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 87.6 bits (218), Expect = 3e-22
 Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 12/96 (12%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L+    L+TG   GIGRA    FA+EGA +    ++       +E  E +         
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGP---LREAAEAVGA------- 51

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               +  D+    + +R   E +    R+D +V+ A
Sbjct: 52  --HPVVMDVADPASVERGFAEALAHLGRLDGVVHYA 85

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 88.1 bits (219), Expect = 4e-22
 Identities = 22/106 (20%), Positives = 41/106 (38%), Gaps = 13/106 (12%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDK---------DAKETLEM 86
            +++  V LVTGG  G GR+     A+EGA +    +    +          D +E    
Sbjct: 6   GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLE 65

Query: 87  LREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           + +      +       D+       R +   V  + ++D++V NA
Sbjct: 66  VEKT----GRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANA 107

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 87.6 bits (218), Expect = 4e-22
 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 6/95 (6%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           LRG VALVTGG  G+G  +    A+ G +V       +E   A E  + L E    +   
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEE---ASEAAQKLTEKYGVET-- 73

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            MA   D+   E  K++++ V   + ++D +VN A
Sbjct: 74  -MAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAA 107

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 88.3 bits (219), Expect = 6e-22
 Identities = 30/139 (21%), Positives = 45/139 (32%), Gaps = 22/139 (15%)

Query: 11  QDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFT 70
           + +  G  H  +       P  +        VALVTG    +GR++      EG  V   
Sbjct: 17  RGSHMGSSHHHHHHSSGLVPRGSHMTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLH 76

Query: 71  YVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLG-----------------FDENCKR 113
           Y +     +A      L   +   A   + + ADL                      C  
Sbjct: 77  YHRSAA--EANALSATLNARRPNSA---ITVQADLSNVATAPVSGADGSAPVTLFTRCAE 131

Query: 114 VVDEVVNAYDRIDILVNNA 132
           +V      + R D+LVNNA
Sbjct: 132 LVAACYTHWGRCDVLVNNA 150

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 86.8 bits (216), Expect = 6e-22
 Identities = 22/91 (24%), Positives = 31/91 (34%), Gaps = 13/91 (14%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           +ALVT      G A      Q+G TV           DA E      E     A      
Sbjct: 3   IALVTHARHFAGPAAVEALTQDGYTVVCHDAS---FADAAERQRFESENPGTIALAE--- 56

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                  +  +R+VD  +   + ID +V+N 
Sbjct: 57  -------QKPERLVDATLQHGEAIDTIVSND 80

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 87.2 bits (217), Expect = 6e-22
 Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 18/97 (18%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           + LR  V +VTG   GIGRA+   F  EG+ V    +    +                  
Sbjct: 4   SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKY--------------- 48

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                I  D+   +  K  +D +   Y  I +LVNNA
Sbjct: 49  ---DHIECDVTNPDQVKASIDHIFKEYGSISVLVNNA 82

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 86.8 bits (216), Expect = 7e-22
 Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 6/91 (6%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           V +VTG   GIG+A+     + G  V   Y +  +   A+E  + +           +  
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAK--AAEEVSKQIEAYGG----QAITF 56

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             D+  + + + ++   ++A+  ID++VNNA
Sbjct: 57  GGDVSKEADVEAMMKTAIDAWGTIDVVVNNA 87

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 87.3 bits (217), Expect = 8e-22
 Identities = 31/139 (22%), Positives = 52/139 (37%), Gaps = 17/139 (12%)

Query: 10  KQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAF 69
           K   Q   +H      Q  + ++ P   L+G   +VTG   GIGR + +  A+ GA V  
Sbjct: 2   KHQHQHQHQHQHQ---QPLNEEFRPEM-LQGKKVIVTGASKGIGREMAYHLAKMGAHVVV 57

Query: 70  TYVKPQEDKDA--KETLEML-REAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRID 126
           T         A  KETL+ +        A     I+  +      ++ V +       +D
Sbjct: 58  T---------ARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLD 108

Query: 127 ILVNNAAEQYECGSVEDID 145
           +L+ N        ++   D
Sbjct: 109 MLILNHITNTS-LNLFHDD 126

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 86.4 bits (215), Expect = 1e-21
 Identities = 27/98 (27%), Positives = 38/98 (38%), Gaps = 12/98 (12%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEML-REAKTPD 94
           N L G   ++TGG  G+G          GA V    V    D++   T   L   A    
Sbjct: 1   NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVL---DEEGAATARELGDAA---- 53

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                    D+  +E+ +RVV      +  +D LVNNA
Sbjct: 54  ----RYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNA 87

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 86.0 bits (214), Expect = 1e-21
 Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 13/118 (11%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           ++ L+G VALVTG   GIGRA+    A +GA VA  Y   +E  +A+ET+  + ++    
Sbjct: 2   NSMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKE--EAEETVYEI-QSNGGS 58

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNA------YDRIDILVNNAAEQYECGSVEDIDE 146
           A    +I A+L      + +   + N         + DIL+NNA        +E+  E
Sbjct: 59  A---FSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAG-IGPGAFIEETTE 112

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 86.4 bits (215), Expect = 1e-21
 Identities = 33/117 (28%), Positives = 44/117 (37%), Gaps = 13/117 (11%)

Query: 18  EHVMNPI-PQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQE 76
            H M  +  Q   P       L G VA+VTG  +GIG AV    A EG  V    +    
Sbjct: 6   HHHMGTLEAQTQGPGSMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDA 65

Query: 77  DKDAKETLEML-REAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              A      +   A         A   D+  ++    +VD  V A+  +D LV NA
Sbjct: 66  ---ADAAATKIGCGA--------AACRVDVSDEQQIIAMVDACVAAFGGVDKLVANA 111

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 86.5 bits (215), Expect = 2e-21
 Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 7/96 (7%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
                VALVTG   GIGR +    A+  + V          K     ++ ++        
Sbjct: 41  CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRT---QKSCDSVVDEIKSFGY---- 93

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           +    + D+   E    V+++++  +  +DILVNNA
Sbjct: 94  ESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNA 129

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 86.1 bits (214), Expect = 2e-21
 Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 28  TSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEML 87
              D    + L G VA+VTG   GIG A+       GA V  T    ++    +     +
Sbjct: 17  IDDDDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEK---LRAVEREI 73

Query: 88  REAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             A      +  + + DL   +        V+ A+ R D+LVNNA
Sbjct: 74  VAA----GGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNA 114

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 85.6 bits (213), Expect = 2e-21
 Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 10/98 (10%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           S +L G VALV+GG  G+G +       EGA V F  +    D++ K     L +A    
Sbjct: 2   SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDIL---DEEGKAMAAELADAA--- 55

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                 +  D+      K  VD  V A+  + +LVNNA
Sbjct: 56  ----RYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNA 89

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 86.3 bits (214), Expect = 2e-21
 Identities = 27/114 (23%), Positives = 38/114 (33%), Gaps = 22/114 (19%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
                 VALVTG    +GR++      EG  V   Y +     +A      L   +   A
Sbjct: 5   TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAA--EANALSATLNARRPNSA 62

Query: 96  KDPMAISADLG-----------------FDENCKRVVDEVVNAYDRIDILVNNA 132
              + + ADL                      C  +V      + R D+LVNNA
Sbjct: 63  ---ITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNA 113

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 85.7 bits (213), Expect = 2e-21
 Identities = 26/97 (26%), Positives = 31/97 (31%), Gaps = 18/97 (18%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
               G VALVTG   GIG AV       GA VA                           
Sbjct: 24  QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD--------------- 68

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              + +  DL        +   V     R+DI+VNNA
Sbjct: 69  ---LHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNA 102

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 85.2 bits (212), Expect = 3e-21
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 5/91 (5%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
            AL+TG   GIGRA+    A++G  +A  Y + +E   A+E  E  R      +     +
Sbjct: 3   KALITGASRGIGRAIALRLAEDGFALAIHYGQNRE--KAEEVAEEARRRG---SPLVAVL 57

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            A+L   E    +V +       +D LVNNA
Sbjct: 58  GANLLEAEAATALVHQAAEVLGGLDTLVNNA 88

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 84.9 bits (211), Expect = 4e-21
 Identities = 34/96 (35%), Positives = 57/96 (59%), Gaps = 9/96 (9%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L+G  ALVTG  +GIG+A+      EGA V     +   +++  ET++ +R A+ PDA 
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRR---EENVNETIKEIR-AQYPDAI 62

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               + ADLG ++ C+ V+++    Y ++DIL+NN 
Sbjct: 63  -LQPVVADLGTEQGCQDVIEK----YPKVDILINNL 93

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 84.9 bits (211), Expect = 5e-21
 Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 10/97 (10%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
            KL G  ALVTG   GIG A+  CF  +GA V     +       ++ L+ +      D 
Sbjct: 23  FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTR-------EDKLKEIAADLGKDV 75

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                 SA+L   ++ K++ +      + IDILVNNA
Sbjct: 76  F---VFSANLSDRKSIKQLAEVAEREMEGIDILVNNA 109

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 84.9 bits (211), Expect = 5e-21
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 18/111 (16%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
            +    VA+VTGG SGIG AV     + GA V    +  + D +  +             
Sbjct: 10  EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSD------------- 56

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
                   D+  +E  K  V++    Y RIDILVNNA  +     +     
Sbjct: 57  ----HFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQY-SPLHLTPT 102

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 84.9 bits (211), Expect = 6e-21
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 13/114 (11%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEML-REAKTP 93
           + +L   VA++TG   GIG       A+ GA V    +   +          + R A   
Sbjct: 6   TAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETD---LAGAAASVGRGA--- 59

Query: 94  DAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA-EQYECGSVEDIDE 146
                +    DL  + + + ++D  ++ + R+DI+ NNAA        V  +  
Sbjct: 60  -----VHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTV 108

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 84.4 bits (210), Expect = 6e-21
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 9/96 (9%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEML-REAKTPDAK 96
           L G  ALVTG   G+G A     A  GA V    ++     ++ +TL     +A      
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDA------ 60

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               ++ D+  +   +    ++      +DIL+NNA
Sbjct: 61  --HGVAFDVTDELAIEAAFSKLDAEGIHVDILINNA 94

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 84.9 bits (211), Expect = 6e-21
 Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 9/121 (7%)

Query: 28  TSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEML 87
           TS   + +N+L+  VA++TGG  GIG      F + GA V    +    D   ++    +
Sbjct: 4   TSTPDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIA---DDHGQKVCNNI 60

Query: 88  REAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA-EQYECGSVEDIDE 146
                        +  D+  DE+ + +VD  +  + ++DI+  N         S+ +   
Sbjct: 61  GSPDV-----ISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGN 115

Query: 147 S 147
            
Sbjct: 116 E 116

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 84.1 bits (209), Expect = 6e-21
 Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 7/96 (7%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            L   VALVTG   GIG  V H  A +GATV  T         A++    ++E       
Sbjct: 2   SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQAS---AEKFENSMKEKGF---- 54

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               +  ++   E+ +    E+      IDILVNNA
Sbjct: 55  KARGLVLNISDIESIQNFFAEIKAENLAIDILVNNA 90

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 84.1 bits (209), Expect = 7e-21
 Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 10/96 (10%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            L G VALVTG   GIG+A+    A+ GA V  T         A+   + L         
Sbjct: 6   NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESG---AQAISDYL-------GD 55

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           +   ++ ++   E+ + V+  + + +  +DILVNNA
Sbjct: 56  NGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNA 91

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 84.2 bits (209), Expect = 8e-21
 Identities = 12/97 (12%), Positives = 28/97 (28%), Gaps = 7/97 (7%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            L     +      GIG        +          + +      E   +  +       
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNI---- 57

Query: 97  DPMAISADLGFD-ENCKRVVDEVVNAYDRIDILVNNA 132
                + D+       K+++ ++ +    +DIL+N A
Sbjct: 58  --TFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGA 92

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 84.2 bits (209), Expect = 8e-21
 Identities = 17/91 (18%), Positives = 29/91 (31%), Gaps = 13/91 (14%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
            A+VT      G       ++ G TVA         K   E                   
Sbjct: 3   TAIVTNVKHFGGMGSALRLSEAGHTVACHDES---FKQKDELEAFAETYPQLKPMSE--- 56

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                  +    +++ V +AY ++D+LV+N 
Sbjct: 57  -------QEPAELIEAVTSAYGQVDVLVSND 80

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 83.7 bits (208), Expect = 1e-20
 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 7/91 (7%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           VALVTG   GIG+A+     ++G  VA           AK     + +A        +A+
Sbjct: 4   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDAT---AKAVASEINQA----GGHAVAV 56

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             D+   +     V++        D++VNNA
Sbjct: 57  KVDVSDRDQVFAAVEQARKTLGGFDVIVNNA 87

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 83.7 bits (208), Expect = 1e-20
 Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 10/98 (10%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           +N+L+G VALVTGG SG+G  V      EGA VAF+ +    +   ++    L E     
Sbjct: 1   TNRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDI---NEAAGQQLAAELGE----- 52

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               M +  D+  + +   V+  V      +++LVNNA
Sbjct: 53  --RSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNA 88

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 83.8 bits (208), Expect = 1e-20
 Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 10/111 (9%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           +K    +A+VTG  SG+GRAV    A  G  VA    +       +ET   + +      
Sbjct: 24  SKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDA---LQETAAEIGD------ 74

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
            D + +  D+   ++ + +    V  + R+D+L NNA        +ED+  
Sbjct: 75  -DALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTF 124

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 83.4 bits (207), Expect = 1e-20
 Identities = 20/96 (20%), Positives = 29/96 (30%), Gaps = 17/96 (17%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
              G    VTG   GIG A    F + GA V        +                 +  
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----------------EQY 46

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                  D+       +V   ++   +R+D LVN A
Sbjct: 47  PFATEVMDVADAAQVAQVCQRLLAETERLDALVNAA 82

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 84.2 bits (209), Expect = 1e-20
 Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 13/137 (9%)

Query: 19  HVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDK 78
           H M  +   T    + + K+ G VA +TG   G GR+     A+EGA +    V  Q D 
Sbjct: 7   HHMGTLEAQTQGPGSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDG 66

Query: 79  ---------DAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILV 129
                    D  ET+  +        +  +A   D+   +  +  VD+ V    R+DI++
Sbjct: 67  VKLPMSTPDDLAETVRQVEAL----GRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVL 122

Query: 130 NNAAEQYECGSVEDIDE 146
            NAA   E   +  +D 
Sbjct: 123 ANAALASEGTRLNRMDP 139

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 84.2 bits (209), Expect = 2e-20
 Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 15/135 (11%)

Query: 9   QKQDTQPGKEHVMNPIPQFTSPDYTPSN--KLRGMVALVTGGDSGIGRAVCHCFAQEGAT 66
           + Q   PG            S     +   +L+G VA +TG   G GR      AQ+GA 
Sbjct: 13  EAQTQGPGSMVDPVRRSTRVSARGQGARMNRLQGKVAFITGAARGQGRTHAVRLAQDGAD 72

Query: 67  VAFTYVKPQEDK---------DAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE 117
           +    +  Q+           + KET+ ++ E      +  +A  AD+    + + VVDE
Sbjct: 73  IVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ---GRR-IIARQADVRDLASLQAVVDE 128

Query: 118 VVNAYDRIDILVNNA 132
            +  +  IDILV+N 
Sbjct: 129 ALAEFGHIDILVSNV 143

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 83.4 bits (207), Expect = 2e-20
 Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 13/109 (11%)

Query: 33  TPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDK---------DAKET 83
           +    L G VA +TG   G GRA     A +GA +    +  Q            +   T
Sbjct: 6   SSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAAT 65

Query: 84  LEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           ++++ +         +A  AD+   E+    +   ++   R+DI+V NA
Sbjct: 66  VKLVEDI----GSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANA 110

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 82.6 bits (205), Expect = 2e-20
 Identities = 22/105 (20%), Positives = 34/105 (32%), Gaps = 18/105 (17%)

Query: 28  TSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEML 87
            +              LVTGG+ GIG A+    A +G  VA T+      K         
Sbjct: 3   ATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL------- 55

Query: 88  REAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                        +  D+   +   R    V      +++LV+NA
Sbjct: 56  -----------FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNA 89

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 82.6 bits (205), Expect = 3e-20
 Identities = 31/112 (27%), Positives = 40/112 (35%), Gaps = 19/112 (16%)

Query: 21  MNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA 80
           M+    F         +L G  A VTG  SGIG  +C  FA  GA +     +      A
Sbjct: 1   MDYRTVF---------RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRA 51

Query: 81  KETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            + L          A     I AD+   E       E   A   + ILVN+A
Sbjct: 52  AQELG---------AAVAARIVADVTDAEAMTAAAAEAE-AVAPVSILVNSA 93

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 81.8 bits (203), Expect = 4e-20
 Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 16/91 (17%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
            ALVTGG  GIGRA+       G  VA     P+E   A ++L  +             +
Sbjct: 4   KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSLGAV------------PL 48

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             DL   ++ K +V   + A   + +LV+ A
Sbjct: 49  PTDLE-KDDPKGLVKRALEALGGLHVLVHAA 78

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 82.3 bits (204), Expect = 5e-20
 Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 8/97 (8%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           + G V +VTG   GIGR +     + GATV  T          +   +  +         
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHL---DTLRVVAQEAQSL----GGQ 55

Query: 98  PMAISADLGFDENCKRVVDEV-VNAYDRIDILVNNAA 133
            + +  D   +   + + ++V      R+D+LVNNA 
Sbjct: 56  CVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAY 92

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 81.4 bits (202), Expect = 7e-20
 Identities = 24/95 (25%), Positives = 32/95 (33%), Gaps = 15/95 (15%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G   LVTG   GIGR         GA V           D    +      +      
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ---ADLDSLVRECPGIE------ 55

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              +  DLG D       +  + +   +D+LVNNA
Sbjct: 56  --PVCVDLG-DWE---ATERALGSVGPVDLLVNNA 84

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 81.5 bits (202), Expect = 1e-19
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 14/108 (12%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDK----------DAKETL 84
           + KL G VA +TG   G GRA     A EGA +    +  +             D  ET+
Sbjct: 6   AGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETV 65

Query: 85  EMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            ++  A     +  +A   D    +  ++VVD+ V A  R+DI+V NA
Sbjct: 66  RLVEAA----NRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANA 109

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 81.0 bits (201), Expect = 1e-19
 Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 6/95 (6%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           ++G +A+VT G SG+G A     A+ GA +       ++    +     +    +     
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREK---LEAAASRIASLVS--GAQ 59

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              ++ D+    +  R+ ++        DILV + 
Sbjct: 60  VDIVAGDIREPGDIDRLFEKAR-DLGGADILVYST 93

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score = 80.7 bits (200), Expect = 1e-19
 Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 4/98 (4%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           S + +  +A++TG   GIG  +    A +G  V       Q  +   + +          
Sbjct: 2   SLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEI----MRSNKH 57

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            ++P+ +  D+         + ++   Y  +DILVN A
Sbjct: 58  VQEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAA 95

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 79.9 bits (198), Expect = 3e-19
 Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 18/95 (18%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
                 LVTGG+ GIG A+   FA  G  VA TY   +  +                   
Sbjct: 19  HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGF----------------- 61

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            +A+  D+   E  ++   E+   +  +++L+ NA
Sbjct: 62  -LAVKCDITDTEQVEQAYKEIEETHGPVEVLIANA 95

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 80.3 bits (199), Expect = 3e-19
 Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 13/105 (12%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDK---------DAKETLEML 87
              G  AL+TGG  G+GR+     A+ GA +A        D          D  ET+ ++
Sbjct: 7   DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALV 66

Query: 88  REAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            +      +  ++   D+      +  V E  +    IDI + NA
Sbjct: 67  EKT---GRR-CISAKVDVKDRAALESFVAEAEDTLGGIDIAITNA 107

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 81.6 bits (202), Expect = 3e-19
 Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 11/96 (11%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G VA+VTG   GIG  +   FA++GATV    V    +   +   ++   A T D   
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTA 270

Query: 98  PMAISADLGFDENCKRVVDEVVNAY-DRIDILVNNA 132
                      +   ++   V   +  ++DILVNNA
Sbjct: 271 D----------DAVDKITAHVTEHHGGKVDILVNNA 296

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 79.9 bits (198), Expect = 4e-19
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 14/114 (12%)

Query: 29  SPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDK---------- 78
           S     +  L+G VA +TG   G GR+     A EGA +    +                
Sbjct: 4   SMVAGQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPE 63

Query: 79  DAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           D  ET  ++ +      +  +    D+  D   + +V + +  + R+D++V NA
Sbjct: 64  DLDETARLVEDQ----GRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANA 113

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 79.5 bits (197), Expect = 4e-19
 Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 17/111 (15%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
            +L G V ++T    GIG+A    FA+EGA V  T +   + ++ ++   +  + +  D 
Sbjct: 2   GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGI--QTRVLDV 59

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
                              +D+  N  +R+D+L N A   +  G+V D +E
Sbjct: 60  TKKKQ--------------IDQFANEVERLDVLFNVAGFVHH-GTVLDCEE 95

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 79.1 bits (196), Expect = 5e-19
 Identities = 24/95 (25%), Positives = 34/95 (35%), Gaps = 15/95 (15%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
             G+ ALVTG   GIGR         GA V           D     +     +      
Sbjct: 5   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNS---DLVSLAKECPGIE------ 55

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              +  DLG D +     ++ +     +D+LVNNA
Sbjct: 56  --PVCVDLG-DWD---ATEKALGGIGPVDLLVNNA 84

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 79.1 bits (196), Expect = 5e-19
 Identities = 27/109 (24%), Positives = 38/109 (34%), Gaps = 19/109 (17%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
                 LVTGG  GIG+AV     Q             +   + E L+            
Sbjct: 2   NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDI--QQSFSAENLK------------ 47

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
              I ADL   ++   V+D +       D +  NA    + GS+ DID 
Sbjct: 48  --FIKADLTKQQDITNVLDIIK--NVSFDGIFLNAGILIK-GSIFDIDI 91

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 79.6 bits (197), Expect = 6e-19
 Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDK-------------DAK 81
           + ++ G VA VTG   G GR+     AQEGA +    +                   D  
Sbjct: 6   TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLA 65

Query: 82  ETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSV 141
           ET ++++       +  +    D+   +  K  VD  V    R+DI+V NA       ++
Sbjct: 66  ETADLVKGH----NRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTL 121

Query: 142 EDIDE 146
           +   E
Sbjct: 122 DKTSE 126

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 77.2 bits (191), Expect = 3e-18
 Identities = 36/108 (33%), Positives = 47/108 (43%), Gaps = 9/108 (8%)

Query: 25  PQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETL 84
                   T    L G  A+VTG  SGIGRA+ H +A+ GA V          + A E  
Sbjct: 16  ENLYFQSMTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIA 75

Query: 85  EMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           +    A         A+ ADL   E    V +E+  A  R+D+LVNNA
Sbjct: 76  DGGGSA--------EAVVADLADLEGAANVAEELA-ATRRVDVLVNNA 114

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 77.0 bits (190), Expect = 6e-18
 Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 7/97 (7%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           +   G  A+VTGG SGIG A    FA+ GA +  + V   +    ++ +  LR       
Sbjct: 27  SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDV---DQPALEQAVNGLRGQ----G 79

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            D   +  D+   +   R+ DE       +D++ +NA
Sbjct: 80  FDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNA 116

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 76.1 bits (188), Expect = 7e-18
 Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 11/109 (10%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           +     +VTG  SG+GRA+     + G  V+    +        + L+            
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRY-------QRLQQQELLLGNAV-- 51

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
            + I ADL   E+        V      +++++ A    E G V     
Sbjct: 52  -IGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAG-TGEFGPVGVYTA 98

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 75.6 bits (187), Expect = 1e-17
 Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 14/96 (14%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            L G  +L+TG  SGIG A+     + G+ V  +          +E L+ L  A   +  
Sbjct: 11  DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSN-------EEKLKSLGNALKDNYT 63

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                  +L   E        +++    +DILV NA
Sbjct: 64  ---IEVCNLANKEE----CSNLISKTSNLDILVCNA 92

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 74.4 bits (183), Expect = 7e-17
 Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 5/97 (5%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
               G  A VTGG +G+G  +      +G  VA   +         + L  L    +   
Sbjct: 4   KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADI---RQDSIDKALATLEAEGS--G 58

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            + M +  D+   E  K   DEV   +  + IL NNA
Sbjct: 59  PEVMGVQLDVASREGFKMAADEVEARFGPVSILCNNA 95

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 71.9 bits (177), Expect = 3e-16
 Identities = 21/95 (22%), Positives = 34/95 (35%), Gaps = 7/95 (7%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           + G + L+TG   GIGR   + FA+  + +    +        +ET    +         
Sbjct: 29  VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHG---LEETAAKCKGLG-AKVH- 83

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                 D    E+      +V      + ILVNNA
Sbjct: 84  --TFVVDCSNREDIYSSAKKVKAEIGDVSILVNNA 116

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 71.2 bits (175), Expect = 5e-16
 Identities = 18/98 (18%), Positives = 34/98 (34%), Gaps = 8/98 (8%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           S   R     V G    IG  +   FA EG TV       ++       +  +  A    
Sbjct: 2   SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEK---LAPLVAEIEAAGG-R 57

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               +A S D   ++     ++   +A+  +++ + N 
Sbjct: 58  I---VARSLDARNEDEVTAFLNA-ADAHAPLEVTIFNV 91

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 70.0 bits (172), Expect = 2e-15
 Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 25/92 (27%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           + +++G  +GIG A        G  +                   +R+A          +
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGID---------------IRDA---------EV 38

Query: 102 SADLGFDENCKRVVDEVV-NAYDRIDILVNNA 132
            ADL   E  K+ + +V+      +D LV  A
Sbjct: 39  IADLSTAEGRKQAIADVLAKCSKGMDGLVLCA 70

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 69.2 bits (170), Expect = 2e-15
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 10/96 (10%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVK-----PQEDKDAKETLEMLREAKTPDAK 96
           + L+TG   GIGRA+   FA+                       ++     R        
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAAD-LEKISLECRAEGA---- 58

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               I+AD+    + +R+   +V  Y  ID LVNNA
Sbjct: 59  LTDTITADISDMADVRRLTTHIVERYGHIDCLVNNA 94

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 69.1 bits (170), Expect = 3e-15
 Identities = 36/118 (30%), Positives = 44/118 (37%), Gaps = 15/118 (12%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA--KETLEMLREAKT 92
            + L+G VAL+TG  SGIG A     A EGA VA           A   E L  L +  T
Sbjct: 2   PSALQGKVALITGASSGIGEATARALAAEGAAVAIA---------ARRVEKLRALGDELT 52

Query: 93  PDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA----AEQYECGSVEDIDE 146
                   +  D+   +     V   V A   +DILVNNA        E     D   
Sbjct: 53  AAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTR 110

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 68.7 bits (169), Expect = 5e-15
 Identities = 25/95 (26%), Positives = 35/95 (36%), Gaps = 22/95 (23%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           +R    LV     GIGRAV    +QEGA V             +E L+            
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICAR-------NEELLKRSGHR------- 62

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              +  DL      ++ +D +      +DILV NA
Sbjct: 63  --YVVCDL------RKDLDLLFEKVKEVDILVLNA 89

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 68.4 bits (168), Expect = 7e-15
 Identities = 23/99 (23%), Positives = 36/99 (36%), Gaps = 21/99 (21%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           V  +TG  SGIG A+    A+ G TV         D+   +    L      +     A+
Sbjct: 3   VIAITGSASGIGAALKELLARAGHTVIGI------DRGQADIEADLSTPGGRET----AV 52

Query: 102 SADLGFDENCKRVVDEVVNA--------YDRIDILVNNA 132
           +A L   + C  V+D +V             + + VN  
Sbjct: 53  AAVL---DRCGGVLDGLVCCAGVGVTAANSGLVVAVNYF 88

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 68.4 bits (168), Expect = 8e-15
 Identities = 24/125 (19%), Positives = 44/125 (35%), Gaps = 17/125 (13%)

Query: 29  SPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA--KETLEM 86
           S    P          +TG  SG G A    FA+ G ++  T            +E L+ 
Sbjct: 10  SSGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLT---------GRREERLQA 60

Query: 87  LREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA-----AEQYECGSV 141
           L    +   +  + ++ D+         VD +   +  +  L+NNA      +  +   +
Sbjct: 61  LAGELSAKTR-VLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDL 119

Query: 142 EDIDE 146
           +D D 
Sbjct: 120 DDWDT 124

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 68.8 bits (168), Expect = 8e-15
 Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 7/105 (6%)

Query: 30  PDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRE 89
           P+  P+   +   A+VTGG+ GIG  +C   +  G  V  T     +  +A E L     
Sbjct: 2   PETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKL----- 56

Query: 90  AKTPDAKDPMAISADLG-FDENCKRVVDEVVNAYDRIDILVNNAA 133
            K  + ++ +    D+         + D +   + ++DILVNNA 
Sbjct: 57  -KNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAG 100

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 67.4 bits (165), Expect = 2e-14
 Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 14/124 (11%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQ---EGATVAFTYVKPQEDKDAKETLEMLREAK 91
           ++ L   V ++TG   G GRA+    A+    G+ +  +       +  KE L     A+
Sbjct: 1   ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEEL----GAQ 56

Query: 92  TPDAKDPMAISADLGFDENCKRVVDEVVNAYD----RIDILVNNAA--EQYECGSVEDID 145
            PD K  +  +ADLG +   +R++  V         +  +L+NNAA       G +   D
Sbjct: 57  QPDLK-VVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVND 115

Query: 146 ESRL 149
            + +
Sbjct: 116 LAEV 119

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 67.8 bits (166), Expect = 2e-14
 Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 12/122 (9%)

Query: 18  EHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQED 77
            H M  +   T         + G V +VTG   GIGRA    FA EGA V    +    D
Sbjct: 6   HHHMGTLEAQTQGP-GSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLD 64

Query: 78  KD-------AKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVN 130
                    A+  ++ +  A      + +A  +++   +    ++   V  +  +D+LVN
Sbjct: 65  GSPASGGSAAQSVVDEITAA----GGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVN 120

Query: 131 NA 132
           NA
Sbjct: 121 NA 122

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 66.5 bits (163), Expect = 3e-14
 Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 19/120 (15%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA--KETLEMLREAKTP 93
            + R  +ALVTG   GIG AV     Q+G  V            A     +E L  A+  
Sbjct: 28  ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGC---------ARTVGNIEELA-AECK 77

Query: 94  DAKDP---MAISADLGFDENCKRVVDEVVNAYDRIDILVNNA----AEQYECGSVEDIDE 146
            A  P   +    DL  +E+   +   + + +  +DI +NNA     +    GS     +
Sbjct: 78  SAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKD 137

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 66.0 bits (162), Expect = 5e-14
 Identities = 23/115 (20%), Positives = 39/115 (33%), Gaps = 15/115 (13%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA--KETLEMLREAKTPDA 95
           +   V L+TG   GIG  +       GA +            A  +  +E +        
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLG---------ARRQARIEAIATEIRDAG 52

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA----AEQYECGSVEDIDE 146
              +A   D+    +        V+ + RID+LVNNA            V++ + 
Sbjct: 53  GTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWER 107

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 66.1 bits (162), Expect = 5e-14
 Identities = 23/124 (18%), Positives = 38/124 (30%), Gaps = 21/124 (16%)

Query: 29  SPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA--KETLEM 86
           +            + ++TG  SGIG A+   F++EG  +            A   E L+ 
Sbjct: 5   TGGQQMGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLL---------ARRVERLKA 55

Query: 87  LREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA----AEQYECGSVE 142
           L    T      +    D+         +      Y   D +VNNA      Q +     
Sbjct: 56  LNLPNT------LCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEAN 109

Query: 143 DIDE 146
           +   
Sbjct: 110 EWQR 113

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 65.6 bits (161), Expect = 5e-14
 Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 16/114 (14%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA--KETLEMLREAKTPDAKD 97
             VA++TG   GIG A+    A++G  +A           A   + LE +      +   
Sbjct: 2   MKVAVITGASRGIGEAIARALARDGYALALG---------ARSVDRLEKIAHELMQEQGV 52

Query: 98  P-MAISADLGFDENCKRVVDEVVNAYDRIDILVNNA----AEQYECGSVEDIDE 146
                  D+   E+ +    +V+  +  +D++V NA     ++ E  S E+  E
Sbjct: 53  EVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHE 106

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 64.6 bits (158), Expect = 2e-13
 Identities = 19/96 (19%), Positives = 40/96 (41%), Gaps = 10/96 (10%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
            ++G+VA++TGG SG+G A       +GA+     +         +  ++          
Sbjct: 9   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDL--PNSGGEAQAKKLGNNCV----- 61

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                 AD+  +++ +  +      + R+D+ VN A
Sbjct: 62  ---FAPADVTSEKDVQTALALAKGKFGRVDVAVNCA 94

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 64.6 bits (158), Expect = 2e-13
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 10/96 (10%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L+  V +VTG  SG+G AV    AQEGATV    +  +     +   E+          
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDL--KPPAGEEPAAELGAAV------ 55

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                +AD+  + +    +      +  +  LVN A
Sbjct: 56  --RFRNADVTNEADATAALAFAKQEFGHVHGLVNCA 89

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 64.8 bits (158), Expect = 2e-13
 Identities = 23/105 (21%), Positives = 39/105 (37%), Gaps = 3/105 (2%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           + L+TG  SG GR      A  G  V  +             +E +      +  D   +
Sbjct: 7   IILITGASSGFGRLTAEALAGAGHRVYASMRDI--VGRNASNVEAIAGFARDNDVDLRTL 64

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
             D+    +  R +D+++    RID+L++NA      G  E    
Sbjct: 65  ELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVF-GPAEAFTP 108

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 63.7 bits (156), Expect = 3e-13
 Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 19/113 (16%)

Query: 41  MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA--KETLEMLREAKTPDAKDP 98
           M+ LVTG  +G G  +   F Q+G  V  T            +E L+ L++    +    
Sbjct: 1   MIVLVTGATAGFGECITRRFIQQGHKVIAT---------GRRQERLQELKDELGDNL--- 48

Query: 99  MAISADLGFDENCKRVVDEVVNAYDRIDILVNNA-----AEQYECGSVEDIDE 146
                D+      + ++  +   +  IDILVNNA      E     SVED + 
Sbjct: 49  YIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWET 101

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 63.8 bits (156), Expect = 3e-13
 Identities = 15/96 (15%), Positives = 33/96 (34%), Gaps = 10/96 (10%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +  G  A+V+GG  G+G A       +G  V    +    +K      E+   A      
Sbjct: 27  QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADL--AAEKGKALADELGNRA------ 78

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               +S ++  +++    ++           +V + 
Sbjct: 79  --EFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHG 112

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 63.3 bits (155), Expect = 3e-13
 Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 14/95 (14%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+  +A+VTG   G+G  +    +++    A             E L  L  A+    + 
Sbjct: 3   LKKKIAVVTGATGGMGIEIVKDLSRDHIVYALGR--------NPEHLAAL--AEIEGVE- 51

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              I +D+  +   +  VD+ +   D +D LV+ A
Sbjct: 52  --PIESDIVKEVLEEGGVDK-LKNLDHVDTLVHAA 83

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 62.5 bits (153), Expect = 7e-13
 Identities = 21/93 (22%), Positives = 36/93 (38%), Gaps = 15/93 (16%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA--KETLEMLREAKTPDAKDPM 99
             L+TG   GIG A       +G  V            A  ++ L+ L      + +  +
Sbjct: 7   AVLITGASRGIGEATARLLHAKGYRVGLM---------ARDEKRLQALAA----ELEGAL 53

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            +  D+  + +  R V  +  A+  +  LVNNA
Sbjct: 54  PLPGDVREEGDWARAVAAMEEAFGELSALVNNA 86

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 61.9 bits (151), Expect = 2e-12
 Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 31/158 (19%)

Query: 2   ASNNQPPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFA 61
           +S++         P   H+        S     + +L     L+TG  +GIG+A    + 
Sbjct: 3   SSHHHHHHSSFLVPRGSHM--------SQGRKAAERLAKKTVLITGASAGIGKATALEYL 54

Query: 62  QEG---ATVAFTYVKPQEDKDA--KETLEMLRE---AKTPDAKDPMAISADLGFDENCKR 113
           +       +            A   E LE L++    + P+AK       D+   E  K 
Sbjct: 55  EASNGDMKLILA---------ARRLEKLEELKKTIDQEFPNAK-VHVAQLDITQAEKIKP 104

Query: 114 VVDEVVNAYDRIDILVNNA-----AEQYECGSVEDIDE 146
            ++ +   +  IDILVNNA     +++    + EDI +
Sbjct: 105 FIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQD 142

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 61.2 bits (149), Expect = 4e-12
 Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 7/98 (7%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYV---KPQEDKDAKETLEMLREAKTPD 94
             G V LVTG   G+GRA    FA+ GA V    +        K +    +++ E +   
Sbjct: 7   FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR--- 63

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
            +   A+ A+    E  +++V   ++ + RID++VNNA
Sbjct: 64  RRGGKAV-ANYDSVEAGEKLVKTALDTFGRIDVVVNNA 100

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 60.3 bits (147), Expect = 5e-12
 Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 14/96 (14%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           ++R  VA+VTGG SG+G A        GA V    ++   +    +              
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR--GEDVVADL-----------GD 52

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                +AD+  +      +D +      + I+VN A
Sbjct: 53  RARFAAADVTDEAAVASALD-LAETMGTLRIVVNCA 87

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 60.4 bits (147), Expect = 6e-12
 Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 13/106 (12%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           V LVTG  SG GRA+       G TV  T  +        E L+ L  A    A+   AI
Sbjct: 7   VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRT-------EALDDLVAAYPDRAE---AI 56

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQY-ECGSVEDIDE 146
           S D+   E    V  +V+  Y R+D+LVNNA     + G+ E+  E
Sbjct: 57  SLDVTDGERIDVVAADVLARYGRVDVLVNNAG--RTQVGAFEETTE 100

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 59.7 bits (145), Expect = 1e-11
 Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)

Query: 42  VALVTGGDSGIGRAVCHCFA-QEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMA 100
           VALVTGG+ GIG A+           V    +  ++    +  ++ L+     +   P  
Sbjct: 6   VALVTGGNKGIGLAIVRDLCRLFSGDV---VLTARDVTRGQAAVQQLQA----EGLSPRF 58

Query: 101 ISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
              D+   ++ + + D +   Y  +D+LVNNA 
Sbjct: 59  HQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAG 91

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 59.3 bits (144), Expect = 2e-11
 Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 7/98 (7%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVA---FTYVKPQEDKDAKETLEMLREAKTPD 94
            +  V ++TG   G+G+     FA+ GA V           +  ++K    ++ E     
Sbjct: 6   FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIV--- 62

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
               +A+ AD     +  ++V+  V  +  + +++NNA
Sbjct: 63  KNGGVAV-ADYNNVLDGDKIVETAVKNFGTVHVIINNA 99

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 58.2 bits (141), Expect = 5e-11
 Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 11/111 (9%)

Query: 22  NPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAK 81
                       P+  L+  V L+TG  +G+G+     FA+ GA V     K    K   
Sbjct: 304 ARKLPANDASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD-ATKTVD 362

Query: 82  ETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
           E      EA             D+   ++ + ++  V++ Y  IDILVNNA
Sbjct: 363 EIKAAGGEA--------WPDQHDVA--KDSEAIIKNVIDKYGTIDILVNNA 403

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 58.3 bits (142), Expect = 2e-11
 Identities = 15/111 (13%), Positives = 37/111 (33%), Gaps = 21/111 (18%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA--KETLEMLREAKTPDAKDPM 99
           + ++TG  SG+G  +   +  EG     T            +  L  +    + +     
Sbjct: 3   LIVITGASSGLGAELAKLYDAEGKATYLT---------GRSESKLSTVTNCLSNNVG--- 50

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNA----AEQYECGSVEDIDE 146
             + DL   +  +++ +++         +V++A        +    E I  
Sbjct: 51  YRARDLASHQEVEQLFEQL---DSIPSTVVHSAGSGYFGLLQEQDPEQIQT 98

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 58.7 bits (142), Expect = 4e-11
 Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 14/118 (11%)

Query: 21  MNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATV------AFTYVKP 74
           M+      S          G VA+VTG  +G+GR     FA+ GA V             
Sbjct: 1   MHHHHHHMSSSDGKLR-YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDG 59

Query: 75  QEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
              + A   ++ +R+A      + +A    +    +  +V++  + A+ R+DILVNNA
Sbjct: 60  ASQRAADIVVDEIRKA----GGEAVADYNSV---IDGAKVIETAIKAFGRVDILVNNA 110

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 56.9 bits (138), Expect = 6e-11
 Identities = 11/107 (10%), Positives = 33/107 (30%), Gaps = 30/107 (28%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
            M  L+ G    +G AV     ++   +                            +   
Sbjct: 3   AMKILLIGASGTLGSAVKERLEKKAEVITA-------------------------GRHSG 37

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
            ++ D+   ++ K++ ++V     ++D +V+          + ++  
Sbjct: 38  DVTVDITNIDSIKKMYEQV----GKVDAIVSATGS-ATFSPLTELTP 79

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 54.1 bits (131), Expect = 6e-10
 Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 23/108 (21%)

Query: 41  MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA--KETLEMLREAKTPDAKDP 98
           M  L+TG   G+G A        G  +  +               L  L  A+   A+  
Sbjct: 1   MRVLITGATGGLGGAFARALK--GHDLLLS---------GRRAGALAEL--AREVGAR-- 45

Query: 99  MAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
            A+ ADL  +   K +++E       +D+LV+    +    SV +   
Sbjct: 46  -ALPADLADELEAKALLEEA----GPLDLLVHAVG-KAGRASVREAGR 87

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 54.5 bits (132), Expect = 7e-10
 Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 20/91 (21%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
            ALVTGG SG+GRA        G  V    ++                    + +D + +
Sbjct: 4   SALVTGGASGLGRAAALALKARGYRVVVLDLR-------------------REGEDLIYV 44

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
             D+  +E+ +R V         +  +V+ A
Sbjct: 45  EGDVTREEDVRRAVARAQ-EEAPLFAVVSAA 74

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 52.4 bits (126), Expect = 4e-09
 Identities = 24/109 (22%), Positives = 37/109 (33%), Gaps = 10/109 (9%)

Query: 42  VALVTGGDSGIGRAVCHCFAQE---GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDP 98
           V L+TG  SGIG  +    A +      V  T          +  L     A        
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDL----KTQGRLWEAARALACPPGSL 59

Query: 99  MAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDES 147
             +  D+   ++     + V     R+D+LV NA      G +E + E 
Sbjct: 60  ETLQLDVRDSKSVAAARERVTE--GRVDVLVCNAGLGLL-GPLEALGED 105

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 52.2 bits (125), Expect = 5e-09
 Identities = 17/115 (14%), Positives = 34/115 (29%), Gaps = 20/115 (17%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
              ++G  A+V  G   +G       A EGA V     K  + + A +++          
Sbjct: 114 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVN--------K 165

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
                  +A+   D +    V            +    A       +E + ++  
Sbjct: 166 RFKVNVTAAETADDASRAEAVKGA-------HFVFTAGA-----IGLELLPQAAW 208

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 48.8 bits (117), Expect = 1e-07
 Identities = 21/95 (22%), Positives = 30/95 (31%), Gaps = 14/95 (14%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
                 ++TG +SG+G       A+ GATV            A         A    A  
Sbjct: 14  FAQRTVVITGANSGLGAVTARELARRGATVIM----------AVRDTRKGEAAARTMAGQ 63

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                 DL    +    V    +     D+L+NNA
Sbjct: 64  VEVRELDLQDLSS----VRRFADGVSGADVLINNA 94

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 48.5 bits (116), Expect = 1e-07
 Identities = 17/112 (15%), Positives = 40/112 (35%), Gaps = 14/112 (12%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGAT--VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
             +VTG + GIG  +     ++     +  T    ++  +       L+  K        
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-------LKSIKDSRVH--- 54

Query: 100 AISADLGFDENCKRVVDEVVNAYDR--IDILVNNAAEQYECGSVEDIDESRL 149
            +   +  D++    V +V        + +L+NNA      G+  + + + +
Sbjct: 55  VLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVI 106

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 46.6 bits (111), Expect = 5e-07
 Identities = 16/113 (14%), Positives = 39/113 (34%), Gaps = 13/113 (11%)

Query: 42  VALVTGGDSGIGRAVCHCFAQ---EGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDP 98
             L+TG + G+G  +             +  T    ++ K+ ++           +    
Sbjct: 23  SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDL-----AKNHSNIH-- 75

Query: 99  MAISADLGFDENCKRVVDEV--VNAYDRIDILVNNAAEQYECGSVEDIDESRL 149
             +  DL   +   ++V ++  V     +++L NNA    +   +  +    L
Sbjct: 76  -ILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQEL 127

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 45.6 bits (109), Expect = 8e-07
 Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 8/94 (8%)

Query: 38  LRGMVALVTG--GDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           L G   +V G      I   +     + GA + FTY     ++  ++++  L  A T D 
Sbjct: 5   LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTY---AGER-LEKSVHEL--AGTLDR 58

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILV 129
            D + +  D+  D   +     +      I  + 
Sbjct: 59  NDSIILPCDVTNDAEIETCFASIKEQVGVIHGIA 92

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 8/94 (8%)

Query: 38  LRGMVALVTG--GDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           L     ++ G      I   V     Q GA + FTY   ++++ +++ LE L   +  + 
Sbjct: 30  LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTY---RKER-SRKELEKL--LEQLNQ 83

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILV 129
            +      D+  DE      +++      ID + 
Sbjct: 84  PEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVY 117

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 10/112 (8%)

Query: 20  VMNPIPQFTSPDYTPSNKLRGMVALVTG--GDSGIGRAVCHCFAQEGATVAFTYVKPQED 77
            +    Q        S  L+G   L+ G   +  I   +     + GA +AFTY   Q D
Sbjct: 11  TLEAQTQGPGSMTAQSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTY---QGD 67

Query: 78  KDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILV 129
              K+ +E L  A+   A   +A   D+    +   V + +   + ++D LV
Sbjct: 68  A-LKKRVEPL--AEELGAF--VAGHCDVADAASIDAVFETLEKKWGKLDFLV 114

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 10/112 (8%)

Query: 20  VMNPIPQFTSPDYTPSNKLRGMVALVTG--GDSGIGRAVCHCFAQEGATVAFTYVKPQED 77
           ++  + +F++        L G  AL+TG   +  I   +   F +EGA +AFTY      
Sbjct: 1   MLRKLSKFSNKGEVFMGLLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTY---ATP 57

Query: 78  KDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILV 129
           K  ++ +  + +         + +  D+  DE+ K +   +   +  +DI+V
Sbjct: 58  K-LEKRVREIAK----GFGSDLVVKCDVSLDEDIKNLKKFLEENWGSLDIIV 104

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 41.7 bits (98), Expect = 3e-05
 Identities = 27/119 (22%), Positives = 34/119 (28%), Gaps = 27/119 (22%)

Query: 38  LRGMVALVTG--GDSGIGRAVCHCFAQEGATVAFTYVKP---------QEDKDAKETLEM 86
           LRG  A V G     G G A+    A  GA VA     P         Q  +  ++    
Sbjct: 7   LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLP 66

Query: 87  LREAKTPDAKDPMAISADLGFDENC----------------KRVVDEVVNAYDRIDILV 129
                      P+  + D   D                   K V  +V      IDILV
Sbjct: 67  DGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILV 125

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 41.0 bits (97), Expect = 4e-05
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 10/94 (10%)

Query: 38  LRGMVALVTG--GDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           L G  ALV G      +G A+     + GA VA +Y   Q ++  +   E L  A+    
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSY---QAER-LRPEAEKL--AEALGG 59

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILV 129
              +   AD+  DE    +   V  A+  +D LV
Sbjct: 60  A--LLFRADVTQDEELDALFAGVKEAFGGLDYLV 91

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 40.7 bits (96), Expect = 5e-05
 Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 11/94 (11%)

Query: 38  LRGMVALVTG--GDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           L G   L+TG   +  I   +     +EGA +AFTYV        K+ +E L      + 
Sbjct: 24  LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYV-----GQFKDRVEKL--CAEFNP 76

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILV 129
                +  D+  D+  K +  E+   +D +D +V
Sbjct: 77  A--AVLPCDVISDQEIKDLFVELGKVWDGLDAIV 108

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 40.3 bits (95), Expect = 7e-05
 Identities = 17/109 (15%), Positives = 38/109 (34%), Gaps = 10/109 (9%)

Query: 23  PIPQFTSPDYTPSNKLRGMVALVTG--GDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA 80
                          + G   ++ G   D  +   +      +GA VA TY     +   
Sbjct: 13  EAQTQGPGSMRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTY---LSET-F 68

Query: 81  KETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILV 129
           K+ ++ L  A++   K  + +  D+   E+   +   +   +  +D +V
Sbjct: 69  KKRVDPL--AESLGVK--LTVPCDVSDAESVDNMFKVLAEEWGSLDFVV 113

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 40.6 bits (95), Expect = 7e-05
 Identities = 23/117 (19%), Positives = 38/117 (32%), Gaps = 9/117 (7%)

Query: 38  LRGMVALVTG--GDSGIGRAVCHCFAQEGATVAFTYV----KPQEDKDAKETLEMLREAK 91
           LRG  A V G    +G G A+C      GA V            +        E      
Sbjct: 7   LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYA 66

Query: 92  TPDAKDPMAISADLGFDENCKRV--VDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
              +    A +A+   D    ++  +D V +    +   V++  ++Y       I E
Sbjct: 67  QEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTPQDVPPEVSS-NKRYAGVGGFTISE 122

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 40.2 bits (95), Expect = 7e-05
 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 10/94 (10%)

Query: 38  LRGMVALVTG--GDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           L G   LVTG      I   +     +EGA +AFTY   Q DK  K  +E    A    +
Sbjct: 7   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTY---QNDK-LKGRVEEF--AAQLGS 60

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILV 129
              + +  D+  D +   +  E+   + + D  V
Sbjct: 61  D--IVLQCDVAEDASIDTMFAELGKVWPKFDGFV 92

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 40.5 bits (95), Expect = 7e-05
 Identities = 24/119 (20%), Positives = 34/119 (28%), Gaps = 27/119 (22%)

Query: 38  LRGMVALVTG--GDSGIGRAVCHCFAQEGATVAFTYV----KPQEDKDAKETLEMLREAK 91
           LRG  A + G   D+G G AV    A  GA +            E    +   +  R   
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 92  TPDAKD-----PMAISADLGFDENC----------------KRVVDEVVNAYDRIDILV 129
                +     P+    D   D                   +   + V   +  IDILV
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILV 124

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 40.3 bits (95), Expect = 8e-05
 Identities = 19/94 (20%), Positives = 39/94 (41%), Gaps = 10/94 (10%)

Query: 38  LRGMVALVTG--GDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           L+G   L+ G   +  I   +      +GAT+AFTY     +   ++ +  + +    + 
Sbjct: 4   LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTY---LNES-LEKRVRPIAQ----EL 55

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILV 129
             P     D+  +E+ K + + V      +D +V
Sbjct: 56  NSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIV 89

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 40.3 bits (95), Expect = 8e-05
 Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 10/94 (10%)

Query: 38  LRGMVALVTG--GDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           L G   L+TG   +  I   +     +EGA +AFTY     D+  K+ +         + 
Sbjct: 12  LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTY---VGDR-FKDRITEFAA----EF 63

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILV 129
              +    D+  D     +   +   +D +D LV
Sbjct: 64  GSELVFPCDVADDAQIDALFASLKTHWDSLDGLV 97

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} Length = 422

 Score = 39.4 bits (91), Expect = 2e-04
 Identities = 22/98 (22%), Positives = 35/98 (35%), Gaps = 7/98 (7%)

Query: 43  ALVTGGDSGIGRAVCHC--FAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK---- 96
            LV G  SG G A      F     T+   + KP     A         A    AK    
Sbjct: 64  VLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGL 123

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYD-RIDILVNNAA 133
              +I+ D   D    +V++ +      ++D++V + A
Sbjct: 124 YSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLA 161

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 38.7 bits (90), Expect = 3e-04
 Identities = 15/114 (13%), Positives = 32/114 (28%), Gaps = 27/114 (23%)

Query: 43  ALVTG--GDSGIGRAVCHCFAQEGATVAFTYVKP---------QEDKDAKETLEMLREAK 91
             + G    +G G  +    ++    + F    P         +  K   + +    +  
Sbjct: 5   CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKM 64

Query: 92  TPDAKDPMAISADLGFDENC----------------KRVVDEVVNAYDRIDILV 129
                 P   S D   D +                 + V + +   Y +I++LV
Sbjct: 65  NILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLV 118

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* Length = 405

 Score = 38.5 bits (89), Expect = 4e-04
 Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 6/97 (6%)

Query: 43  ALVTGGDSGIGRA--VCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDP-- 98
            LV G  +G G A  +   F     T+   + +P E+     +      A    A     
Sbjct: 50  VLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGL 109

Query: 99  --MAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
              +I+ D   DE  +  +D +     ++D ++ + A
Sbjct: 110 YAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLA 146

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 37.2 bits (87), Expect = 7e-04
 Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 14/97 (14%)

Query: 38  LRGMVALVTG--GDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           L G   LV+G   DS I   +     ++GA +  T       +  +   + L        
Sbjct: 5   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGF--DRLRLIQRITDRL-------P 55

Query: 96  KDPMAISADLGFDENCKRVVDEV---VNAYDRIDILV 129
                +  D+  +E+   +   V   + A +++D +V
Sbjct: 56  AKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVV 92

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	149
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.91
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.9
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.88
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.88
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.86
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.86
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.85
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.85
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.85
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.85
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.85
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.85
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.84
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.84
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.84
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.84
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.84
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.84
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.84
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.84
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.84
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.84
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.84
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.84
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.83
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.83
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.83
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.83
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.83
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.83
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.83
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.83
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.83
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.83
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.83
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.83
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.83
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.83
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.82
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.82
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.82
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.82
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.82
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.82
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.82
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.82
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.82
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.82
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.82
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.81
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.81
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.81
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.81
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.81
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.81
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.81
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.81
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.81
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.81
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.81
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.81
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.81
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.81
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.8
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.8
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.8
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.8
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.8
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.8
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.8
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.8
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.8
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.8
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.8
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.8
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.8
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.8
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.8
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.8
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.8
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.8
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.8
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.8
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.8
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.79
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.79
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.79
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.79
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.79
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.79
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.79
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.79
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.79
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.79
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.79
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.79
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.79
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.79
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.79
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.78
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.78
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.78
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.78
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.78
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.78
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.78
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.77
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.77
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.77
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.77
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.77
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.77
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.77
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.77
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.77
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.77
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.77
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.77
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.77
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.77
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.77
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.77
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.77
1spx_A	278	Short-chain reductase family member (5L265); paral	99.77
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.77
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.77
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.77
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.77
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.76
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.76
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.76
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.76
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.76
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.76
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.76
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.76
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.76
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.76
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.76
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.76
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.76
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.76
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.75
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.75
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.75
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.75
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.75
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.75
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.75
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.75
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.75
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.74
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.74
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.74
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.74
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.74
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.74
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.74
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.73
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.73
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.73
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.73
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.73
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.73
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.73
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.73
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.73
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.73
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.72
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.72
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.72
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.72
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.71
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.71
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.71
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.71
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.71
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.71
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.7
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.7
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.7
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.7
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.7
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.69
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.69
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.69
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.69
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.69
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.68
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.68
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.68
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.67
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.67
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.67
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.66
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.66
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.66
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.66
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.66
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.64
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.64
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.64
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.64
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.64
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.64
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.62
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.61
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.61
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.61
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.6
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.59
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.59
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.59
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.58
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.58
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.58
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.54
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.54
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.54
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.53
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.52
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.5
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.48
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.47
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.42
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.42
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.4
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.36
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.36
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.34
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.33
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.32
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.31
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.31
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.29
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.29
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.28
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.28
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.28
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.27
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.26
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.26
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.26
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.26
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.26
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.25
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.25
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.25
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.23
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.23
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.23
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.23
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.22
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.22
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.22
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.21
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.2
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.19
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.19
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.19
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.18
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.17
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.16
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.16
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.15
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.15
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.15
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.15
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.13
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.13
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.12
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.12
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.11
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.11
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.1
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.09
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.09
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.09
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.09
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.08
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.08
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.07
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.07
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.06
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.05
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.05
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	99.05
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.03
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.01
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	99.01
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	98.98
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	98.97
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	98.96
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	98.96
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	98.95
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	98.95
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	98.94
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	98.94
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	98.94
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	98.93
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	98.93
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	98.91
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	98.87
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	98.87
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	98.86
4f6l_B	508	AUSA reductase domain protein; thioester reductase	98.85
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	98.83
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	98.81
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.79
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.77
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	98.73
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	98.72
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	98.71
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	98.68
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.6
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.57
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.52
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.5
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	98.48
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.46
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.38
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.33
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.29
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	98.27
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.26
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.25
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.25
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.24
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.24
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.24
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.2
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.19
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.18
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.17
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.17
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.08
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.06
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.06
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.01
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.97
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.97
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.92
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.91
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.88
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.88
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.86
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.85
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.84
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.78
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	97.77
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.77
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.75
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.74
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	97.72
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.7
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.66
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.65
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.62
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.61
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.61
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.6
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.58
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.5
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.49
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.45
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.44
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.43
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.38
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.37
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.36
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.32
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.29
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.29
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.26
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.24
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.21
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.19
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.16
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.15
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.11
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.11
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.11
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.04
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.03
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.97
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	96.96
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.95
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.93
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.92
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.92
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.91
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.91
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.91
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.9
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.9
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.88
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.84
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.82
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.82
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.8
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.8
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	96.79
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.77
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.7
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.68
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.68
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.66
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.61
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.6
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	96.58
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.52
2l82_A	162	Designed protein OR32; structural genomics, northe	96.51
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.5
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.44
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.38
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.31
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.31
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.29
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.28
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.23
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	96.23
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.17
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.15
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.14
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.13
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.1
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.1
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.09
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	96.03
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.01
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	95.93
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	95.93
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.81
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	95.76
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	95.76
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	95.74
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	95.69
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	95.67
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	95.67
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.67
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	95.65
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.64
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.58
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	95.58
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	95.56
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	95.53
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	95.5
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	95.46
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	95.38
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.36
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.35
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.33
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	95.28
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.27
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.24
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.21
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.16
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	95.11
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	95.06
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	94.99
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	94.99
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	94.93
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	94.93
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	94.83
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	94.77
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	94.75
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	94.75
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	94.74
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	94.74
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	94.67
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	94.63
4g65_A	461	TRK system potassium uptake protein TRKA; structur	94.62
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	94.61
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	94.6
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	94.6
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	94.6
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	94.58
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	94.58
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	94.54
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	94.48
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	94.42
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	94.28
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	94.25
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	94.25
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	94.22
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	94.12
2dwc_A	433	PH0318, 433AA long hypothetical phosphoribosylglyc	94.07
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	94.06
1lnq_A	336	MTHK channels, potassium channel related protein;	94.0
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	93.91
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	93.91
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	93.87
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	93.85
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	93.84
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	93.83
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	93.73

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.91  E-value=1e-23  Score=154.55  Aligned_cols=106  Identities=27%  Similarity=0.439  Sum_probs=94.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .++||++|||||++|||+++|++|++.|++|++++|+   .+.+++..+++..    .+.++.++.+|++++++++++++
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~---~~~~~~~~~~i~~----~g~~~~~~~~Dvt~~~~v~~~~~   76 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELL---EDRLNQIVQELRG----MGKEVLGVKADVSKKKDVEEFVR   76 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC---HHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHH
Confidence            5899999999999999999999999999999999997   5566677777766    56788999999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++.+++|+||+||||||+.....++.+++.++|
T Consensus        77 ~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~  109 (254)
T 4fn4_A           77 RTFETYSRIDVLCNNAGIMDGVTPVAEVSDELW  109 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHH
T ss_pred             HHHHHcCCCCEEEECCcccCCCCChhhCCHHHH
Confidence            999999999999999998765578999887765

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.90  E-value=8.3e-24  Score=155.06  Aligned_cols=107  Identities=24%  Similarity=0.328  Sum_probs=95.6

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           35 SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        35 ~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      ++.++||++|||||++|||+++|++|++.|++|++++|+   .+.+.+..+++..    .+.++.++.+|++++++++++
T Consensus         4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~---~~~~~~~~~~l~~----~g~~~~~~~~Dv~~~~~v~~~   76 (255)
T 4g81_D            4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIR---ATLLAESVDTLTR----KGYDAHGVAFDVTDELAIEAA   76 (255)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSC---HHHHHHHHHHHHH----TTCCEEECCCCTTCHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHh----cCCcEEEEEeeCCCHHHHHHH
Confidence            357899999999999999999999999999999999996   5566667777766    567788999999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++++.+++|+||+||||||+... .++.+++.++|
T Consensus        77 ~~~~~~~~G~iDiLVNNAG~~~~-~~~~~~~~e~~  110 (255)
T 4g81_D           77 FSKLDAEGIHVDILINNAGIQYR-KPMVELELENW  110 (255)
T ss_dssp             HHHHHHTTCCCCEEEECCCCCCC-CCGGGCCHHHH
T ss_pred             HHHHHHHCCCCcEEEECCCCCCC-CChhhCCHHHH
Confidence            99999999999999999999876 78999988765

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.88  E-value=1.8e-22  Score=149.30  Aligned_cols=102  Identities=26%  Similarity=0.352  Sum_probs=89.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .|+||++||||+++|||+++|+.|++.|++|++++|+   .+.+++..+++       +.+...+.+|++|+++++++++
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~---~~~l~~~~~~~-------g~~~~~~~~Dv~~~~~v~~~~~   95 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRR---KDVLDAAIAEI-------GGGAVGIQADSANLAELDRLYE   95 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHH-------CTTCEEEECCTTCHHHHHHHHH
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHc-------CCCeEEEEecCCCHHHHHHHHH
Confidence            4899999999999999999999999999999999997   44555555443       3457889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++.+++|+||+||||||+... .++.+++.++|
T Consensus        96 ~~~~~~G~iDiLVNNAG~~~~-~~~~~~~~e~w  127 (273)
T 4fgs_A           96 KVKAEAGRIDVLFVNAGGGSM-LPLGEVTEEQY  127 (273)
T ss_dssp             HHHHHHSCEEEEEECCCCCCC-CCTTSCCHHHH
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CChhhccHHHH
Confidence            999999999999999999765 78999988765

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.88  E-value=1.7e-21  Score=145.05  Aligned_cols=128  Identities=43%  Similarity=0.742  Sum_probs=100.5

Q ss_pred             CCccccCCCCCCCCCCCCCCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCC
Q 044851           15 PGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD   94 (149)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (149)
                      +.....+.+.+.+..+.+.....+++|++|||||++|||+++|++|++.|++|++++|+..  .......+.+..    .
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~--~~~~~~~~~~~~----~   95 (291)
T 3ijr_A           22 PGIESLMNPLPQFEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEE--GDANETKQYVEK----E   95 (291)
T ss_dssp             SCCGGGCSSCCCCCCTTCCCCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH--HHHHHHHHHHHT----T
T ss_pred             cchhccCCCCccccccccccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHHHHh----c
Confidence            3344556666666666666666789999999999999999999999999999999999732  222233333333    4


Q ss_pred             CCCceEEEecCCChHHHHHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851           95 AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus        95 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +.++.++.+|++|.++++++++++.++++++|+||||||+.....++.+.+.++
T Consensus        96 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~  149 (291)
T 3ijr_A           96 GVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQ  149 (291)
T ss_dssp             TCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHH
T ss_pred             CCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHH
Confidence            567889999999999999999999999999999999999876545676666544

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.86  E-value=1.9e-21  Score=142.80  Aligned_cols=104  Identities=27%  Similarity=0.369  Sum_probs=85.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +.++||++|||||++|||+++|++|++.|++|++++|+.....    ..+++.+    .+.++.++.+|+++++++++++
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~----~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~v   74 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA----FLDALAQ----RQPRATYLPVELQDDAQCRDAV   74 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH----HHHHHHH----HCTTCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH----HHHHHHh----cCCCEEEEEeecCCHHHHHHHH
Confidence            4689999999999999999999999999999999999855432    2233333    3567889999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      +++.+++|+||+||||||+...  ...+.+.++|
T Consensus        75 ~~~~~~~G~iDiLVNnAGi~~~--~~~~~~~e~~  106 (258)
T 4gkb_A           75 AQTIATFGRLDGLVNNAGVNDG--IGLDAGRDAF  106 (258)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCC--CCTTSCHHHH
T ss_pred             HHHHHHhCCCCEEEECCCCCCC--CCccCCHHHH
Confidence            9999999999999999998653  3346665543

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.86  E-value=6.9e-21  Score=141.97  Aligned_cols=125  Identities=31%  Similarity=0.529  Sum_probs=96.1

Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCc
Q 044851           19 HVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDP   98 (149)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (149)
                      ..+.+.+......++....+++|++|||||++|||+++|++|++.|++|++++++.. ........+.+..    .+.++
T Consensus        28 ~~~~~~~~~~~~~~~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~-~~~~~~~~~~~~~----~~~~~  102 (294)
T 3r3s_A           28 AKMTPVPDCGEKSYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAE-EEDAQQVKALIEE----CGRKA  102 (294)
T ss_dssp             GGSSSCCCCSTTTCCCCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGG-HHHHHHHHHHHHH----TTCCE
T ss_pred             ccCCCCccccccCcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcc-hhHHHHHHHHHHH----cCCcE
Confidence            334444444444455556689999999999999999999999999999999988621 2233333344444    45678


Q ss_pred             eEEEecCCChHHHHHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851           99 MAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus        99 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      .++.+|++|.++++++++++.+.++++|+||||||+.....++.+.+.++
T Consensus       103 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~  152 (294)
T 3r3s_A          103 VLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQ  152 (294)
T ss_dssp             EECCCCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHH
T ss_pred             EEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHH
Confidence            88999999999999999999999999999999999876445677776554

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.85  E-value=3.3e-21  Score=140.66  Aligned_cols=98  Identities=26%  Similarity=0.440  Sum_probs=84.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +|++|||||++|||+++|++|++.|++|++++++   .+.+.    ++.+    ...++.++.+|++|+++++++++++.
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~---~~~~~----~~~~----~~~~~~~~~~Dv~~~~~v~~~v~~~~   70 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDID---EKRSA----DFAK----ERPNLFYFHGDVADPLTLKKFVEYAM   70 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHH----HHHT----TCTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHH----HHHH----hcCCEEEEEecCCCHHHHHHHHHHHH
Confidence            5899999999999999999999999999999996   33222    2333    34567889999999999999999999


Q ss_pred             HhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          120 NAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      +++|+||+||||||+... .++.+++.++|
T Consensus        71 ~~~g~iDiLVNNAG~~~~-~~~~~~~~e~~   99 (247)
T 3ged_A           71 EKLQRIDVLVNNACRGSK-GILSSLLYEEF   99 (247)
T ss_dssp             HHHSCCCEEEECCCCCCC-CGGGTCCHHHH
T ss_pred             HHcCCCCEEEECCCCCCC-CCcccCCHHHH
Confidence            999999999999999766 78888887764

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.85  E-value=5.1e-21  Score=140.20  Aligned_cols=106  Identities=20%  Similarity=0.243  Sum_probs=84.1

Q ss_pred             CCCCCCEEEEecCCC--hHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHH
Q 044851           36 NKLRGMVALVTGGDS--GIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKR  113 (149)
Q Consensus        36 ~~~~~~~~litG~s~--gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  113 (149)
                      +.++||++||||+++  |||+++|+.|++.|++|++++|+....   ++..+.+.+.   .+.++.++.+|+++++++++
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~---~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~   75 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSR---KELEKLLEQL---NQPEAHLYQIDVQSDEEVIN   75 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGH---HHHHHHHGGG---TCSSCEEEECCTTCHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHH---HHHHHHHHhc---CCCcEEEEEccCCCHHHHHH
Confidence            468999999999865  999999999999999999999974433   3333334331   34568889999999999999


Q ss_pred             HHHHHHHhcCCccEEEeCCcCCCC---CCCCCCCCCC
Q 044851          114 VVDEVVNAYDRIDILVNNAAEQYE---CGSVEDIDES  147 (149)
Q Consensus       114 ~~~~~~~~~g~id~li~~ag~~~~---~~~~~~~s~~  147 (149)
                      +++++.+++|++|+||||||+...   ...+.+.+.+
T Consensus        76 ~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~  112 (256)
T 4fs3_A           76 GFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSRE  112 (256)
T ss_dssp             HHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHH
T ss_pred             HHHHHHHHhCCCCEEEeccccccccccccccccCCHH
Confidence            999999999999999999998653   1334454443

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.85  E-value=8.1e-21  Score=140.11  Aligned_cols=105  Identities=22%  Similarity=0.321  Sum_probs=88.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++|||||++|||+++|++|++.|++|++++|+   ...+.+..+++..    .+..+.++.+|++|.+++++++
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~   96 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATT---EAGAEGIGAAFKQ----AGLEGRGAVLNVNDATAVDALV   96 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHHHH----HTCCCEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHh----cCCcEEEEEEeCCCHHHHHHHH
Confidence            35789999999999999999999999999999999996   4444555555544    3556788999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++.+.++++|+||||||+... .++.+.+.++
T Consensus        97 ~~~~~~~g~iD~lvnnAg~~~~-~~~~~~~~~~  128 (270)
T 3ftp_A           97 ESTLKEFGALNVLVNNAGITQD-QLAMRMKDDE  128 (270)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCC-BCTTTCCHHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCC-CCcccCCHHH
Confidence            9999999999999999998765 5676666554

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.85  E-value=5.8e-21  Score=140.23  Aligned_cols=108  Identities=18%  Similarity=0.379  Sum_probs=92.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++|||||++|||+++|++|++.|++|++++|.....+.+.+..+++..    .+.++.++.+|++|.+++++++
T Consensus         7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~   82 (262)
T 3ksu_A            7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELED----QGAKVALYQSDLSNEEEVAKLF   82 (262)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHT----TTCEEEEEECCCCSHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHh----cCCcEEEEECCCCCHHHHHHHH
Confidence            357899999999999999999999999999999998865555566666666665    4567889999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++.++++++|+||||||+... .++.+.+.++
T Consensus        83 ~~~~~~~g~iD~lvnnAg~~~~-~~~~~~~~~~  114 (262)
T 3ksu_A           83 DFAEKEFGKVDIAINTVGKVLK-KPIVETSEAE  114 (262)
T ss_dssp             HHHHHHHCSEEEEEECCCCCCS-SCGGGCCHHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCC-CCcccCCHHH
Confidence            9999999999999999999776 6777776554

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.85  E-value=7.8e-21  Score=141.81  Aligned_cols=105  Identities=27%  Similarity=0.434  Sum_probs=88.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCC-CCceEEEecCCChHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA-KDPMAISADLGFDENCKRV  114 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~  114 (149)
                      ..+++|++|||||++|||+++|++|++.|++|++++|+..   .+.+..+++..    .+ .++.++.+|++|.++++++
T Consensus        37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~---~~~~~~~~l~~----~~~~~~~~~~~Dv~d~~~v~~~  109 (293)
T 3rih_A           37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPR---ELSSVTAELGE----LGAGNVIGVRLDVSDPGSCADA  109 (293)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGG---GGHHHHHHHTT----SSSSCEEEEECCTTCHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHHHh----hCCCcEEEEEEeCCCHHHHHHH
Confidence            4578999999999999999999999999999999999743   33444455543    23 5688899999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++++.++++++|+||||||+... .++.+.+.++
T Consensus       110 ~~~~~~~~g~iD~lvnnAg~~~~-~~~~~~~~~~  142 (293)
T 3rih_A          110 ARTVVDAFGALDVVCANAGIFPE-ARLDTMTPEQ  142 (293)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCC-CCTTTCCHHH
T ss_pred             HHHHHHHcCCCCEEEECCCCCCC-CCcccCCHHH
Confidence            99999999999999999999765 6777776654

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.85  E-value=2.3e-20  Score=139.38  Aligned_cols=109  Identities=28%  Similarity=0.358  Sum_probs=91.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC---------ChHHHHHHHHHHHhccCCCCCCceEEEecCC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ---------EDKDAKETLEMLREAKTPDAKDPMAISADLG  106 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~  106 (149)
                      ..+++|++|||||++|||+++|++|++.|++|++++|+..         ..+.+.+..+++..    .+.++.++.+|++
T Consensus        24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~   99 (299)
T 3t7c_A           24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEA----LGRRIIASQVDVR   99 (299)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHH----TTCCEEEEECCTT
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHh----cCCceEEEECCCC
Confidence            3588999999999999999999999999999999998632         24455566666655    5667889999999


Q ss_pred             ChHHHHHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          107 FDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       107 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      |.++++++++++.+.++++|+||||||+.....++.+++.++
T Consensus       100 ~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~  141 (299)
T 3t7c_A          100 DFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKT  141 (299)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHH
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHH
Confidence            999999999999999999999999999977634477776654

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.84  E-value=7.2e-21  Score=140.45  Aligned_cols=108  Identities=34%  Similarity=0.463  Sum_probs=90.4

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHH
Q 044851           34 PSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKR  113 (149)
Q Consensus        34 ~~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  113 (149)
                      ....+++|++|||||++|||+++|++|++.|++|++++++.  ...+.+..+++..    .+.++.++.+|++|.+++++
T Consensus        25 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~--~~~~~~~~~~l~~----~~~~~~~~~~Dv~d~~~v~~   98 (271)
T 3v2g_A           25 TSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNA--AERAQAVVSEIEQ----AGGRAVAIRADNRDAEAIEQ   98 (271)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHHHHh----cCCcEEEEECCCCCHHHHHH
Confidence            33458899999999999999999999999999999987752  3445555555655    56678899999999999999


Q ss_pred             HHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          114 VVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       114 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++++.+.+|++|+||||||+... .++.+.+.++
T Consensus        99 ~~~~~~~~~g~iD~lvnnAg~~~~-~~~~~~~~~~  132 (271)
T 3v2g_A           99 AIRETVEALGGLDILVNSAGIWHS-APLEETTVAD  132 (271)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCC-CCGGGCCHHH
T ss_pred             HHHHHHHHcCCCcEEEECCCCCCC-CChhhCCHHH
Confidence            999999999999999999999765 6777776554

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.84  E-value=1e-20  Score=139.94  Aligned_cols=105  Identities=24%  Similarity=0.341  Sum_probs=88.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++|||||++|||++++++|++.|++|++++|+...   +.+..+++..    .+.++.++.+|++|.+++++++
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~Dl~d~~~v~~~~  100 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDA---LQVVADEIAG----VGGKALPIRCDVTQPDQVRGML  100 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGG---GHHHHHHHHH----TTCCCEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHh----cCCeEEEEEcCCCCHHHHHHHH
Confidence            45789999999999999999999999999999999997433   3444455554    4567889999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++.++++++|+||||||+... .++.+.+.++
T Consensus       101 ~~~~~~~g~iD~lvnnAg~~~~-~~~~~~~~~~  132 (276)
T 3r1i_A          101 DQMTGELGGIDIAVCNAGIVSV-QAMLDMPLEE  132 (276)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCC-CCGGGCCHHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCC-CCcccCCHHH
Confidence            9999999999999999999765 6677766554

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.84  E-value=1.5e-20  Score=138.59  Aligned_cols=109  Identities=28%  Similarity=0.444  Sum_probs=89.2

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHH
Q 044851           33 TPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCK  112 (149)
Q Consensus        33 ~~~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  112 (149)
                      |....+++|++|||||++|||+++|++|++.|++|++++++.  ...+.+..+++..    .+..+.++.+|++|.++++
T Consensus        21 m~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~D~~d~~~v~   94 (269)
T 4dmm_A           21 MTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASS--AGAADEVVAAIAA----AGGEAFAVKADVSQESEVE   94 (269)
T ss_dssp             ---CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHH----TTCCEEEEECCTTSHHHHH
T ss_pred             ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCC--hHHHHHHHHHHHh----cCCcEEEEECCCCCHHHHH
Confidence            334468899999999999999999999999999999998852  3444555555554    4567889999999999999


Q ss_pred             HHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          113 RVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       113 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++++++.+.++++|+||||||+... .++.+.+.++
T Consensus        95 ~~~~~~~~~~g~id~lv~nAg~~~~-~~~~~~~~~~  129 (269)
T 4dmm_A           95 ALFAAVIERWGRLDVLVNNAGITRD-TLLLRMKRDD  129 (269)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCC-CCGGGCCHHH
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCC-CCcccCCHHH
Confidence            9999999999999999999999765 6677766554

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.84  E-value=1.5e-20  Score=139.47  Aligned_cols=105  Identities=26%  Similarity=0.373  Sum_probs=88.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+|++|||||++|||+++|++|++.|++|++++|+   .+.+.+..+++..    .+..+.++.+|++|.++++++++
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~l~~----~~~~~~~~~~Dv~d~~~v~~~~~   97 (283)
T 3v8b_A           25 NQPSPVALITGAGSGIGRATALALAADGVTVGALGRT---RTEVEEVADEIVG----AGGQAIALEADVSDELQMRNAVR   97 (283)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHHTT----TTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHH
Confidence            4788999999999999999999999999999999997   4455555555544    45678899999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.+|++|+||||||+.....++.+.+.++
T Consensus        98 ~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~  129 (283)
T 3v8b_A           98 DLVLKFGHLDIVVANAGINGVWAPIDDLKPFE  129 (283)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCCTTTSCHHH
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCchhhCCHHH
Confidence            99999999999999999875446777776554

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.84  E-value=1.2e-20  Score=138.85  Aligned_cols=98  Identities=26%  Similarity=0.358  Sum_probs=83.8

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           35 SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        35 ~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .+.++||++|||||++|||+++|++|++.|++|++++|+...                 ......++.+|++++++++.+
T Consensus         6 l~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~-----------------~~~~~~~~~~Dv~~~~~v~~~   68 (261)
T 4h15_A            6 FLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE-----------------GLPEELFVEADLTTKEGCAIV   68 (261)
T ss_dssp             CCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT-----------------TSCTTTEEECCTTSHHHHHHH
T ss_pred             ccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh-----------------CCCcEEEEEcCCCCHHHHHHH
Confidence            347899999999999999999999999999999999997321                 123346789999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCC-CCCCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYE-CGSVEDIDESRL  149 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~-~~~~~~~s~~~~  149 (149)
                      ++++.+++|++|+||||||+... ..++.+++.++|
T Consensus        69 ~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~  104 (261)
T 4h15_A           69 AEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDW  104 (261)
T ss_dssp             HHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHH
T ss_pred             HHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHH
Confidence            99999999999999999998654 357888887654

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.84  E-value=2e-20  Score=140.81  Aligned_cols=108  Identities=31%  Similarity=0.473  Sum_probs=90.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC---------ChHHHHHHHHHHHhccCCCCCCceEEEecCC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ---------EDKDAKETLEMLREAKTPDAKDPMAISADLG  106 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~  106 (149)
                      ..+++|++|||||++|||+++|++|++.|++|++++++..         ..+.+.+..+++..    .+..+.++.+|++
T Consensus        42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~  117 (317)
T 3oec_A           42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEE----QGRRIIARQADVR  117 (317)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHH----TTCCEEEEECCTT
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHh----cCCeEEEEECCCC
Confidence            4578999999999999999999999999999999987522         23445555555555    5667889999999


Q ss_pred             ChHHHHHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          107 FDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       107 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      |.++++++++++.+.+|++|+||||||+... .++.+.+.++
T Consensus       118 d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~-~~~~~~~~~~  158 (317)
T 3oec_A          118 DLASLQAVVDEALAEFGHIDILVSNVGISNQ-GEVVSLTDQQ  158 (317)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCC-BCTTTCCHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCC-CCcccCCHHH
Confidence            9999999999999999999999999999765 5677776554

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.84  E-value=3.9e-20  Score=136.72  Aligned_cols=106  Identities=25%  Similarity=0.370  Sum_probs=88.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++|||||++|||++++++|++.|++|++++|+   .+.+.+..+++...   .+.++.++.+|+++.+++++++
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~   96 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRS---LPRVLTAARKLAGA---TGRRCLPLSMDVRAPPAVMAAV   96 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESC---HHHHHHHHHHHHHH---HSSCEEEEECCTTCHHHHHHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHH
Confidence            35789999999999999999999999999999999997   34444444544321   2456889999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++.++++++|+||||||+... .++.+.+.++
T Consensus        97 ~~~~~~~g~id~lv~nAg~~~~-~~~~~~~~~~  128 (277)
T 4fc7_A           97 DQALKEFGRIDILINCAAGNFL-CPAGALSFNA  128 (277)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCC-CCGGGCCHHH
T ss_pred             HHHHHHcCCCCEEEECCcCCCC-CCcccCCHHH
Confidence            9999999999999999998765 6777766554

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.84  E-value=3.7e-20  Score=136.91  Aligned_cols=108  Identities=22%  Similarity=0.364  Sum_probs=90.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCC---------hHHHHHHHHHHHhccCCCCCCceEEEecCC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQE---------DKDAKETLEMLREAKTPDAKDPMAISADLG  106 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~  106 (149)
                      ..+++|++||||+++|||+++|++|++.|++|++++|+...         .+.+.+..+.+..    .+.++.++.+|++
T Consensus         6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~   81 (281)
T 3s55_A            6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEK----TGRRCISAKVDVK   81 (281)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHH----TTCCEEEEECCTT
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHh----cCCeEEEEeCCCC
Confidence            35789999999999999999999999999999999997332         3445555555554    5667889999999


Q ss_pred             ChHHHHHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          107 FDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       107 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      |.++++++++++.+.+|++|+||||||+... .++.+.+.++
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~-~~~~~~~~~~  122 (281)
T 3s55_A           82 DRAALESFVAEAEDTLGGIDIAITNAGISTI-ALLPEVESAQ  122 (281)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCEEEECCCCCCC-CCTTCCCHHH
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCCC-CCcccCCHHH
Confidence            9999999999999999999999999999765 6777776554

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.84  E-value=3.5e-20  Score=136.06  Aligned_cols=105  Identities=18%  Similarity=0.349  Sum_probs=90.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||+++|++|++.|++|++++|+   .+.+.+..+++..    .+.++.++.+|++|.++++++++
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~   80 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAART---VERLEDVAKQVTD----TGRRALSVGTDITDDAQVAHLVD   80 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC---HHHHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999997   4455566666655    56678899999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.++++++|+||||||+.....++.+.+.++
T Consensus        81 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~  112 (264)
T 3ucx_A           81 ETMKAYGRVDVVINNAFRVPSMKPFANTTFEH  112 (264)
T ss_dssp             HHHHHTSCCSEEEECCCSCCCCCCGGGCCHHH
T ss_pred             HHHHHcCCCcEEEECCCCCCCCCCchhCCHHH
Confidence            99999999999999999864446777776554

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.84  E-value=3e-20  Score=136.38  Aligned_cols=106  Identities=24%  Similarity=0.421  Sum_probs=89.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++|||||++|||+++|++|++.|++|++++|+   .+.+.+..+++...   ...++.++.+|+++.+++++++
T Consensus         6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~l~~~---~~~~~~~~~~Dv~~~~~v~~~~   79 (262)
T 3pk0_A            6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRS---TADIDACVADLDQL---GSGKVIGVQTDVSDRAQCDALA   79 (262)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHTT---SSSCEEEEECCTTSHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHhh---CCCcEEEEEcCCCCHHHHHHHH
Confidence            35789999999999999999999999999999999997   44555555666541   2257888999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++.++++++|+||||||+... .++.+.+.++
T Consensus        80 ~~~~~~~g~id~lvnnAg~~~~-~~~~~~~~~~  111 (262)
T 3pk0_A           80 GRAVEEFGGIDVVCANAGVFPD-APLATMTPEQ  111 (262)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCC-CCTTTCCHHH
T ss_pred             HHHHHHhCCCCEEEECCCCCCC-CChhhCCHHH
Confidence            9999999999999999999765 6777776654

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.84  E-value=3.2e-20  Score=135.78  Aligned_cols=104  Identities=28%  Similarity=0.463  Sum_probs=88.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++|||||++|||++++++|++.|++|++++|+   .+.+.+..+++..    .+.++.++.+|++|.++++.++
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~   80 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLK---SEGAEAVAAAIRQ----AGGKAIGLECNVTDEQHREAVI   80 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESS---HHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHh----cCCcEEEEECCCCCHHHHHHHH
Confidence            35789999999999999999999999999999999996   4455555556655    5667889999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++.++++++|+||||||+... .++ +.+.++
T Consensus        81 ~~~~~~~g~id~lv~nAg~~~~-~~~-~~~~~~  111 (256)
T 3gaf_A           81 KAALDQFGKITVLVNNAGGGGP-KPF-DMPMSD  111 (256)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCC-CCT-TCCHHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCC-CCC-CCCHHH
Confidence            9999999999999999999765 555 555443

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.84  E-value=3.6e-20  Score=135.70  Aligned_cols=107  Identities=25%  Similarity=0.384  Sum_probs=88.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++|||||++|||+++|++|++.|++|++++++.  .+...+..+++..    .+.++.++.+|++|.+++++++
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~   77 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGA--AEGAATAVAEIEK----LGRSALAIKADLTNAAEVEAAI   77 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSS--CHHHHHHHHHHHT----TTSCCEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCC--HHHHHHHHHHHHh----cCCceEEEEcCCCCHHHHHHHH
Confidence            457899999999999999999999999999999885542  3344455555554    4567889999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++.+++|++|+||||||+.....++.+.+.++
T Consensus        78 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~  110 (259)
T 3edm_A           78 SAAADKFGEIHGLVHVAGGLIARKTIAEMDEAF  110 (259)
T ss_dssp             HHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHH
T ss_pred             HHHHHHhCCCCEEEECCCccCCCCChhhCCHHH
Confidence            999999999999999999874446777776554

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.83  E-value=2.1e-20  Score=136.73  Aligned_cols=104  Identities=26%  Similarity=0.481  Sum_probs=88.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||+++|++|++.|++|++++|+   .+.+.+..+++..    .+.++.++.+|+++.++++++++
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~   75 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRT---KEKLEEAKLEIEQ----FPGQILTVQMDVRNTDDIQKMIE   75 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCC----STTCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999997   4445555555543    45678889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.++++++|+||||||+... .++.+.+.++
T Consensus        76 ~~~~~~g~id~lv~nAg~~~~-~~~~~~~~~~  106 (257)
T 3imf_A           76 QIDEKFGRIDILINNAAGNFI-CPAEDLSVNG  106 (257)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC-CCGGGCCHHH
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CChhhCCHHH
Confidence            999999999999999998765 6777776554

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.83  E-value=4.6e-20  Score=136.72  Aligned_cols=108  Identities=27%  Similarity=0.370  Sum_probs=89.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC-------------ChHHHHHHHHHHHhccCCCCCCceEEEe
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ-------------EDKDAKETLEMLREAKTPDAKDPMAISA  103 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (149)
                      .+++|++||||+++|||+++|++|++.|++|++++|+..             ..+.+.+..+++..    .+.++.++.+
T Consensus         8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~   83 (286)
T 3uve_A            8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKG----HNRRIVTAEV   83 (286)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHT----TTCCEEEEEC
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhh----cCCceEEEEc
Confidence            578999999999999999999999999999999988621             23445555555554    4567889999


Q ss_pred             cCCChHHHHHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          104 DLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       104 Dv~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      |+++.++++++++++.+.++++|+||||||+.....++.+.+.++
T Consensus        84 Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~  128 (286)
T 3uve_A           84 DVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEED  128 (286)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHH
Confidence            999999999999999999999999999999976633477766554

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.83  E-value=4.2e-20  Score=136.04  Aligned_cols=106  Identities=32%  Similarity=0.501  Sum_probs=89.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++||||+++|||+++|++|++.|++|++++++.  ...+.+..+++..    .+.++.++.+|++|.+++++++
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~   87 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANS--TKDAEKVVSEIKA----LGSDAIAIKADIRQVPEIVKLF   87 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHH----TTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCC--HHHHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHH
Confidence            358899999999999999999999999999999988752  3445555555655    5667889999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++.++++++|+||||||+... .++.+.+.++
T Consensus        88 ~~~~~~~g~id~lvnnAg~~~~-~~~~~~~~~~  119 (270)
T 3is3_A           88 DQAVAHFGHLDIAVSNSGVVSF-GHLKDVTEEE  119 (270)
T ss_dssp             HHHHHHHSCCCEEECCCCCCCC-CCGGGCCHHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCC-CCcccCCHHH
Confidence            9999999999999999999765 6777776654

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.83  E-value=5.7e-20  Score=135.69  Aligned_cols=107  Identities=31%  Similarity=0.403  Sum_probs=90.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC----------ChHHHHHHHHHHHhccCCCCCCceEEEecCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ----------EDKDAKETLEMLREAKTPDAKDPMAISADLG  106 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~  106 (149)
                      .+++|++||||+++|||+++|++|++.|++|++++|+..          ....+.+..+++..    .+..+.++.+|++
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~   83 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEA----ANRRIVAAVVDTR   83 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHH----TTCCEEEEECCTT
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHh----cCCeEEEEECCCC
Confidence            478999999999999999999999999999999988421          34455556665655    5667889999999


Q ss_pred             ChHHHHHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          107 FDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       107 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      |.++++.+++++.++++++|+||||||+... .++.+.+.++
T Consensus        84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~-~~~~~~~~~~  124 (277)
T 3tsc_A           84 DFDRLRKVVDDGVAALGRLDIIVANAGVAAP-QAWDDITPED  124 (277)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCC-CCGGGCCHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCC-CChhhCCHHH
Confidence            9999999999999999999999999999776 6777776554

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.83  E-value=1.8e-20  Score=138.88  Aligned_cols=106  Identities=28%  Similarity=0.431  Sum_probs=89.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+.+|++|||||++|||+++|++|++.|++|++++|+   ...+.+..+++..    .+.++.++.+|+++.++++.++
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~   76 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARN---GNALAELTDEIAG----GGGEAAALAGDVGDEALHEALV   76 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSC---HHHHHHHHHHHTT----TTCCEEECCCCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHh----cCCcEEEEECCCCCHHHHHHHH
Confidence            35789999999999999999999999999999999997   4445555555544    4567888999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++.++++++|+||||||+.....++.+.+.++
T Consensus        77 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~  109 (280)
T 3tox_A           77 ELAVRRFGGLDTAFNNAGALGAMGEISSLSVEG  109 (280)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCChhhCCHHH
Confidence            999999999999999999875446677766544

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.83  E-value=5.2e-20  Score=136.10  Aligned_cols=107  Identities=24%  Similarity=0.402  Sum_probs=89.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC----------ChHHHHHHHHHHHhccCCCCCCceEEEecCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ----------EDKDAKETLEMLREAKTPDAKDPMAISADLG  106 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~  106 (149)
                      .+++|++||||+++|||+++|++|++.|++|++++|+..          ..+.+.+..+++..    .+.++.++.+|++
T Consensus        12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~   87 (280)
T 3pgx_A           12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVED----QGRKALTRVLDVR   87 (280)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHT----TTCCEEEEECCTT
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHh----cCCeEEEEEcCCC
Confidence            578999999999999999999999999999999998421          24455555555554    5667889999999


Q ss_pred             ChHHHHHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          107 FDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       107 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      |.++++++++++.++++++|+||||||+... .++.+.+.++
T Consensus        88 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~-~~~~~~~~~~  128 (280)
T 3pgx_A           88 DDAALRELVADGMEQFGRLDVVVANAGVLSW-GRVWELTDEQ  128 (280)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCEEEECCCCCCC-BCGGGCCHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCC-CCcccCCHHH
Confidence            9999999999999999999999999999765 5777776554

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.83  E-value=6.4e-20  Score=134.72  Aligned_cols=107  Identities=25%  Similarity=0.297  Sum_probs=88.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +.+++|++||||+++|||+++|++|++.|++|++++|+   .+.+.+..+++....  .+.++.++.+|++|.++++.++
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~l~~~~--~~~~~~~~~~Dv~~~~~v~~~~   78 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARD---GERLRAAESALRQRF--PGARLFASVCDVLDALQVRAFA   78 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHHS--TTCCEEEEECCTTCHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHHhc--CCceEEEEeCCCCCHHHHHHHH
Confidence            45789999999999999999999999999999999997   444455555554311  2345788999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++.+.++++|+||||||+... .++.+.+.++
T Consensus        79 ~~~~~~~g~id~lvnnAg~~~~-~~~~~~~~~~  110 (265)
T 3lf2_A           79 EACERTLGCASILVNNAGQGRV-STFAETTDEA  110 (265)
T ss_dssp             HHHHHHHCSCSEEEECCCCCCC-BCTTTCCHHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCC-CCcccCCHHH
Confidence            9999999999999999999765 6777776654

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.83  E-value=3.2e-20  Score=136.57  Aligned_cols=103  Identities=20%  Similarity=0.325  Sum_probs=88.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|++|||||++|||+++|++|++.|++|++++|+   .+.+.+..+++..    .+..+.++.+|+++.+++++++++
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~l~~----~~~~~~~~~~Dv~d~~~v~~~~~~   74 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARR---QARIEAIATEIRD----AGGTALAQVLDVTDRHSVAAFAQA   74 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHHHH----TTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHHHH
Confidence            568999999999999999999999999999999997   4455556666655    456678899999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +.+.+|++|+||||||+... .++.+.+.++
T Consensus        75 ~~~~~g~iD~lVnnAG~~~~-~~~~~~~~~~  104 (264)
T 3tfo_A           75 AVDTWGRIDVLVNNAGVMPL-SPLAAVKVDE  104 (264)
T ss_dssp             HHHHHSCCCEEEECCCCCCC-CCGGGCCHHH
T ss_pred             HHHHcCCCCEEEECCCCCCC-CCcccCCHHH
Confidence            99999999999999999765 6777776554

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.83  E-value=5.6e-20  Score=137.48  Aligned_cols=104  Identities=26%  Similarity=0.425  Sum_probs=89.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+|++|||||++|||+++|++|++.|++|++++|+   ...+.+..+++..    .+..+.++.+|+++.++++++++
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~---~~~~~~~~~~l~~----~~~~~~~~~~Dv~d~~~v~~~~~  100 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVD---QPALEQAVNGLRG----QGFDAHGVVCDVRHLDEMVRLAD  100 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHh----cCCceEEEEccCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999997   4455566666655    46678899999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.++++|+||||||+... .++.+.+.++
T Consensus       101 ~~~~~~g~id~lvnnAg~~~~-~~~~~~~~~~  131 (301)
T 3tjr_A          101 EAFRLLGGVDVVFSNAGIVVA-GPLAQMNHDD  131 (301)
T ss_dssp             HHHHHHSSCSEEEECCCCCCC-BCGGGCCHHH
T ss_pred             HHHHhCCCCCEEEECCCcCCC-CCcccCCHHH
Confidence            999999999999999999765 5676666543

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.83  E-value=2.5e-20  Score=140.49  Aligned_cols=108  Identities=24%  Similarity=0.391  Sum_probs=89.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC-------CChHHHHHHHHHHHhccCCCCCCceEEEecCCCh
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP-------QEDKDAKETLEMLREAKTPDAKDPMAISADLGFD  108 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~  108 (149)
                      ..+++|++|||||++|||+++|++|++.|++|++++|+.       .....+.+..+++..    .+.++.++.+|++|.
T Consensus        23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~d~   98 (322)
T 3qlj_A           23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA----AGGEAVADGSNVADW   98 (322)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHH----TTCEEEEECCCTTSH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHh----cCCcEEEEECCCCCH
Confidence            357899999999999999999999999999999999861       112344555555655    456788899999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          109 ENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       109 ~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++.++++++.+.++++|+||||||+... .++.+.+.++
T Consensus        99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~-~~~~~~~~~~  137 (322)
T 3qlj_A           99 DQAAGLIQTAVETFGGLDVLVNNAGIVRD-RMIANTSEEE  137 (322)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEECCCCCCCC-CCGGGCCHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCC-CCcccCCHHH
Confidence            99999999999999999999999999775 6777776554

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.83  E-value=2.4e-20  Score=137.13  Aligned_cols=106  Identities=26%  Similarity=0.360  Sum_probs=88.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++||||+++|||+++|++|++.|++|++++|+   .+.+.+..+++...   .+.++.++.+|++|.++++.++
T Consensus        16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~l~~~---~~~~~~~~~~Dv~~~~~v~~~~   89 (266)
T 4egf_A           16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRD---VSELDAARRALGEQ---FGTDVHTVAIDLAEPDAPAELA   89 (266)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHH---HCCCEEEEECCTTSTTHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHH
Confidence            45789999999999999999999999999999999997   44444444444331   2456889999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++.++++++|+||||||+... .++.+.+.++
T Consensus        90 ~~~~~~~g~id~lv~nAg~~~~-~~~~~~~~~~  121 (266)
T 4egf_A           90 RRAAEAFGGLDVLVNNAGISHP-QPVVDTDPQL  121 (266)
T ss_dssp             HHHHHHHTSCSEEEEECCCCCC-CCGGGCCHHH
T ss_pred             HHHHHHcCCCCEEEECCCcCCC-CChhhCCHHH
Confidence            9999999999999999999775 6777766554

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.83  E-value=2.9e-20  Score=137.21  Aligned_cols=104  Identities=26%  Similarity=0.381  Sum_probs=90.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||+++|++|++.|++|++++|+   .+.+.+..+++..    .+.++.++.+|++|.++++++++
T Consensus        23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~l~~----~~~~~~~~~~Dv~d~~~v~~~~~   95 (271)
T 4ibo_A           23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTD---PSRVAQTVQEFRN----VGHDAEAVAFDVTSESEIIEAFA   95 (271)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSC---HHHHHHHHHHHHH----TTCCEEECCCCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHh----cCCceEEEEcCCCCHHHHHHHHH
Confidence            5789999999999999999999999999999999986   4455566666655    45678889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.++++|+||||||+... .++.+.+.++
T Consensus        96 ~~~~~~g~iD~lv~nAg~~~~-~~~~~~~~~~  126 (271)
T 4ibo_A           96 RLDEQGIDVDILVNNAGIQFR-KPMIELETAD  126 (271)
T ss_dssp             HHHHHTCCCCEEEECCCCCCC-CCGGGCCHHH
T ss_pred             HHHHHCCCCCEEEECCCCCCC-CCchhCCHHH
Confidence            999999999999999999765 6777776654

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.83  E-value=5.5e-20  Score=134.82  Aligned_cols=105  Identities=26%  Similarity=0.363  Sum_probs=88.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+.+|++|||||++|||+++|++|++.|++|++++|+   .+.+.+..+++..    .+..+.++.+|+++.+++..++
T Consensus        25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~   97 (262)
T 3rkr_A           25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARD---VEKLRAVEREIVA----AGGEAESHACDLSHSDAIAAFA   97 (262)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCEEEEEECCTTCHHHHHHHH
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHH----hCCceeEEEecCCCHHHHHHHH
Confidence            35789999999999999999999999999999999997   4455555555655    4567888999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +++.+.++++|+||||||+.....++.+.+.+
T Consensus        98 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~  129 (262)
T 3rkr_A           98 TGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPA  129 (262)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCSSCGGGSCHH
T ss_pred             HHHHHhcCCCCEEEECCCccCCCCCcccCCHH
Confidence            99999999999999999985443566666544

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.83  E-value=5.2e-20  Score=135.57  Aligned_cols=109  Identities=25%  Similarity=0.346  Sum_probs=85.0

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHH
Q 044851           33 TPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCK  112 (149)
Q Consensus        33 ~~~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  112 (149)
                      +....+++|++|||||++|||+++|++|++.|++|++++++.  ...+.+..+++..    .+.++.++.+|+++.++++
T Consensus        20 ~~~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~v~   93 (267)
T 3u5t_A           20 FQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGK--AAAAEEVAGKIEA----AGGKALTAQADVSDPAAVR   93 (267)
T ss_dssp             -------CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSC--SHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHH
T ss_pred             ccccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCC--HHHHHHHHHHHHh----cCCeEEEEEcCCCCHHHHH
Confidence            333346799999999999999999999999999999886542  3334444555554    4567888999999999999


Q ss_pred             HHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          113 RVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       113 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++++++.+.++++|+||||||+... .++.+.+.++
T Consensus        94 ~~~~~~~~~~g~iD~lvnnAG~~~~-~~~~~~~~~~  128 (267)
T 3u5t_A           94 RLFATAEEAFGGVDVLVNNAGIMPL-TTIAETGDAV  128 (267)
T ss_dssp             HHHHHHHHHHSCEEEEEECCCCCCC-CCGGGCCHHH
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCC-CChhhCCHHH
Confidence            9999999999999999999999765 6777766544

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.82  E-value=6.2e-20  Score=135.82  Aligned_cols=103  Identities=30%  Similarity=0.376  Sum_probs=86.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|++|||||++|||+++|++|++.|++|++++|+   .+.+.+..+++..    .+..+.++.+|++|.+++++++++
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~l~~----~~~~~~~~~~Dv~d~~~v~~~~~~   94 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARD---AKNVSAAVDGLRA----AGHDVDGSSCDVTSTDEVHAAVAA   94 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHT----TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHh----cCCcEEEEECCCCCHHHHHHHHHH
Confidence            578999999999999999999999999999999997   4455556666654    466788999999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +.+++|++|+||||||+... .++.+.+.++
T Consensus        95 ~~~~~g~id~lv~nAg~~~~-~~~~~~~~~~  124 (279)
T 3sju_A           95 AVERFGPIGILVNSAGRNGG-GETADLDDAL  124 (279)
T ss_dssp             HHHHHCSCCEEEECCCCCCC-SCGGGCCHHH
T ss_pred             HHHHcCCCcEEEECCCCCCC-CChhhCCHHH
Confidence            99999999999999999765 6677766543

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.82  E-value=4e-20  Score=137.24  Aligned_cols=107  Identities=28%  Similarity=0.438  Sum_probs=89.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChH----HHHHHHHHHHhccCCCCCCceEEEecCCChHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDK----DAKETLEMLREAKTPDAKDPMAISADLGFDENCK  112 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  112 (149)
                      .+++|++|||||++|||+++|++|++.|++|++++|+....+    .+.+..+++..    .+.++.++.+|+++.++++
T Consensus         6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~   81 (285)
T 3sc4_A            6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEE----AGGQALPIVGDIRDGDAVA   81 (285)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHH----HTSEEEEEECCTTSHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHh----cCCcEEEEECCCCCHHHHH
Confidence            478999999999999999999999999999999999865322    23444444544    3556889999999999999


Q ss_pred             HHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          113 RVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       113 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++++++.+.++++|+||||||+... .++.+.+.++
T Consensus        82 ~~~~~~~~~~g~id~lvnnAg~~~~-~~~~~~~~~~  116 (285)
T 3sc4_A           82 AAVAKTVEQFGGIDICVNNASAINL-GSIEEVPLKR  116 (285)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCC-CCTTTSCHHH
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCC-CCcccCCHHH
Confidence            9999999999999999999999765 6777776554

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.82  E-value=5.3e-20  Score=134.38  Aligned_cols=103  Identities=15%  Similarity=0.156  Sum_probs=86.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||+++|++|++.|++|++++|+...   +.+..+++..    .+.++.++.+|++|.++++.+++
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~   76 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEK---LAPLVAEIEA----AGGRIVARSLDARNEDEVTAFLN   76 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGG---GHHHHHHHHH----TTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHh----cCCeEEEEECcCCCHHHHHHHHH
Confidence            4688999999999999999999999999999999997443   4444555554    45678899999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+. +++|+||||||+... .++.+.+.++
T Consensus        77 ~~~~~-g~id~lv~nAg~~~~-~~~~~~~~~~  106 (252)
T 3h7a_A           77 AADAH-APLEVTIFNVGANVN-FPILETTDRV  106 (252)
T ss_dssp             HHHHH-SCEEEEEECCCCCCC-CCGGGCCHHH
T ss_pred             HHHhh-CCceEEEECCCcCCC-CCcccCCHHH
Confidence            99998 999999999999775 6777766544

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.82  E-value=6.4e-20  Score=135.77  Aligned_cols=112  Identities=29%  Similarity=0.343  Sum_probs=84.8

Q ss_pred             CCCCCCCCCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecC
Q 044851           26 QFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADL  105 (149)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv  105 (149)
                      +...+..+....+++|++|||||++|||+++|++|++.|++|++++|+   .+.+.+..+++       +..+.++.+|+
T Consensus        15 ~~~g~~sm~~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~-------~~~~~~~~~Dv   84 (277)
T 3gvc_A           15 QTQGPGSMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADID---GDAADAAATKI-------GCGAAACRVDV   84 (277)
T ss_dssp             ------------CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHH-------CSSCEEEECCT
T ss_pred             ccCCCCCCCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHc-------CCcceEEEecC
Confidence            333444454456899999999999999999999999999999999986   33344443333       34578899999


Q ss_pred             CChHHHHHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          106 GFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       106 ~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +|.++++.+++++.+.++++|+||||||+... .++.+.+.++
T Consensus        85 ~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~-~~~~~~~~~~  126 (277)
T 3gvc_A           85 SDEQQIIAMVDACVAAFGGVDKLVANAGVVHL-ASLIDTTVED  126 (277)
T ss_dssp             TCHHHHHHHHHHHHHHHSSCCEEEECCCCCCC-BCTTTCCHHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC-CChhhCCHHH
Confidence            99999999999999999999999999999765 5677766554

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.82  E-value=5.4e-20  Score=135.79  Aligned_cols=107  Identities=25%  Similarity=0.385  Sum_probs=88.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChH----HHHHHHHHHHhccCCCCCCceEEEecCCChHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDK----DAKETLEMLREAKTPDAKDPMAISADLGFDENCK  112 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  112 (149)
                      .+++|++||||+++|||+++|++|++.|++|++++|+....+    .+.+..+++..    .+.++.++.+|+++.++++
T Consensus         3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~   78 (274)
T 3e03_A            3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNA----AGGQGLALKCDIREEDQVR   78 (274)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHH----HTSEEEEEECCTTCHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHh----cCCeEEEEeCCCCCHHHHH
Confidence            578999999999999999999999999999999999865322    23344444443    3566888999999999999


Q ss_pred             HHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          113 RVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       113 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++++++.++++++|+||||||+... .++.+.+.++
T Consensus        79 ~~~~~~~~~~g~iD~lvnnAG~~~~-~~~~~~~~~~  113 (274)
T 3e03_A           79 AAVAATVDTFGGIDILVNNASAIWL-RGTLDTPMKR  113 (274)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCC-CCGGGSCHHH
T ss_pred             HHHHHHHHHcCCCCEEEECCCcccC-CCcccCCHHH
Confidence            9999999999999999999999765 6677666543

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.82  E-value=9.1e-20  Score=134.86  Aligned_cols=109  Identities=22%  Similarity=0.292  Sum_probs=88.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++|||||++|||+++|++|++.|++|++++|+   .+.+.+..+++... ......+.++.+|++|.+++++++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~l~~~-~~~~~~~~~~~~Dv~~~~~v~~~~   82 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRN---PDKLAGAVQELEAL-GANGGAIRYEPTDITNEDETARAV   82 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHTT-CCSSCEEEEEECCTTSHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHHh-CCCCceEEEEeCCCCCHHHHHHHH
Confidence            35789999999999999999999999999999999987   44455555556541 111236788999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++.+.++++|+||||||+.....++.+.+.++
T Consensus        83 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~  115 (281)
T 3svt_A           83 DAVTAWHGRLHGVVHCAGGSENIGPITQVDSEA  115 (281)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHH
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCCcccCCHHH
Confidence            999999999999999999855446777766554

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.82  E-value=1e-19  Score=133.87  Aligned_cols=105  Identities=25%  Similarity=0.412  Sum_probs=85.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+|++|||||++|||++++++|++.|++|++++++  ..........++..    .+.++.++.+|++|.++++++++
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~v~~~~~   95 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSE--RNDHVSTWLMHERD----AGRDFKAYAVDVADFESCERCAE   95 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECS--CHHHHHHHHHHHHT----TTCCCEEEECCTTCHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC--chHHHHHHHHHHHh----cCCceEEEEecCCCHHHHHHHHH
Confidence            3678999999999999999999999999999999864  23444444444444    45678899999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.++++|+||||||+... .++.+.+.++
T Consensus        96 ~~~~~~g~id~li~nAg~~~~-~~~~~~~~~~  126 (269)
T 3gk3_A           96 KVLADFGKVDVLINNAGITRD-ATFMKMTKGD  126 (269)
T ss_dssp             HHHHHHSCCSEEEECCCCCCC-BCTTTCCHHH
T ss_pred             HHHHHcCCCCEEEECCCcCCC-cchhhCCHHH
Confidence            999999999999999999765 5666665543

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.82  E-value=1.8e-19  Score=131.13  Aligned_cols=104  Identities=34%  Similarity=0.445  Sum_probs=87.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||++++++|++.|++|++++|+   .+.+.+..+++..    .+.++.++.+|+++.++++.+++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~l~~----~~~~~~~~~~Dv~~~~~~~~~~~   76 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARR---VEKLRALGDELTA----AGAKVHVLELDVADRQGVDAAVA   76 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHh----cCCcEEEEECCCCCHHHHHHHHH
Confidence            3678999999999999999999999999999999997   3444455555554    35567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.++++|+||||||+... .++.+.+.++
T Consensus        77 ~~~~~~g~id~lv~nAg~~~~-~~~~~~~~~~  107 (247)
T 2jah_A           77 STVEALGGLDILVNNAGIMLL-GPVEDADTTD  107 (247)
T ss_dssp             HHHHHHSCCSEEEECCCCCCC-CCSTTCCHHH
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CchhhCCHHH
Confidence            999999999999999998754 5677666543

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.82  E-value=1.3e-19  Score=138.11  Aligned_cols=108  Identities=23%  Similarity=0.354  Sum_probs=90.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHH----HHHHHHHHHhccCCCCCCceEEEecCCChHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKD----AKETLEMLREAKTPDAKDPMAISADLGFDENC  111 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v  111 (149)
                      ..+++|++||||+++|||+++|++|++.|++|++++|+....++    +.+..+++..    .+.++.++.+|++|.+++
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~----~g~~~~~~~~Dv~d~~~v  116 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEA----VGGKALPCIVDVRDEQQI  116 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHH----TTCEEEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHh----cCCeEEEEEccCCCHHHH
Confidence            45789999999999999999999999999999999998654322    3444555554    456788899999999999


Q ss_pred             HHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          112 KRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       112 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++++++.+.++++|+||||||+... .++.+.+.++
T Consensus       117 ~~~~~~~~~~~g~iDilVnnAG~~~~-~~~~~~~~~~  152 (346)
T 3kvo_A          117 SAAVEKAIKKFGGIDILVNNASAISL-TNTLDTPTKR  152 (346)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCC-CCTTTCCHHH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCC-CCcccCCHHH
Confidence            99999999999999999999999765 6777766543

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.82  E-value=1.6e-19  Score=131.15  Aligned_cols=104  Identities=31%  Similarity=0.487  Sum_probs=87.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +.+|++||||+++|||++++++|++.|++|++++++.  .+.+.+..+++..    .+.++.++.+|++|.+++++++++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~~   75 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGS--KEKAEAVVEEIKA----KGVDSFAIQANVADADEVKAMIKE   75 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHH----TTSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999988752  3445555555655    456788899999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +.++++++|+||||||+... .++.+.+.++
T Consensus        76 ~~~~~g~id~lv~nAg~~~~-~~~~~~~~~~  105 (246)
T 3osu_A           76 VVSQFGSLDVLVNNAGITRD-NLLMRMKEQE  105 (246)
T ss_dssp             HHHHHSCCCEEEECCCCCCC-CCTTTCCHHH
T ss_pred             HHHHcCCCCEEEECCCCCCC-CCcccCCHHH
Confidence            99999999999999999765 6677766554

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.82  E-value=6.8e-20  Score=135.85  Aligned_cols=106  Identities=25%  Similarity=0.376  Sum_probs=83.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||+++|++|++.|++|++++|+   .+.+.+..+++...   .+..+.++.+|++|.++++++++
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~  103 (281)
T 4dry_A           30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRR---PDVLDAAAGEIGGR---TGNIVRAVVCDVGDPDQVAALFA  103 (281)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHH---HSSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHhc---CCCeEEEEEcCCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999997   34444455555431   22334789999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.++++|+||||||+.....++.+.+.++
T Consensus       104 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~  135 (281)
T 4dry_A          104 AVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQ  135 (281)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCCGGGCCHHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCcccCCHHH
Confidence            99999999999999999875545677776554

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.81  E-value=2e-19  Score=131.16  Aligned_cols=106  Identities=25%  Similarity=0.400  Sum_probs=87.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecC--CChHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADL--GFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv--~~~~~v~~~  114 (149)
                      .+++|++|||||++|||+++|++|++.|++|++++|+   .+.+.+..+++...   .+..+.++.+|+  ++.++++.+
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~   82 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRN---EEKLRQVASHINEE---TGRQPQWFILDLLTCTSENCQQL   82 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHH---HSCCCEEEECCTTTCCHHHHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHhh---cCCCceEEEEecccCCHHHHHHH
Confidence            4789999999999999999999999999999999997   44444455555431   233678899999  999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++++.+.++++|+||||||+.....++.+.+.++
T Consensus        83 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~  116 (252)
T 3f1l_A           83 AQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQV  116 (252)
T ss_dssp             HHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHH
T ss_pred             HHHHHHhCCCCCEEEECCccCCCCCCcccCCHHH
Confidence            9999999999999999999865445777776554

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.81  E-value=2.3e-20  Score=135.97  Aligned_cols=99  Identities=29%  Similarity=0.374  Sum_probs=82.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +.++||++||||+++|||+++|+.|++.|++|++++|+..  +   +..+++.+    .+.++.++.+|++|+++++.++
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~---~~~~~~~~----~g~~~~~~~~Dv~d~~~v~~~~   75 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--D---ETLDIIAK----DGGNASALLIDFADPLAAKDSF   75 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--H---HHHHHHHH----TTCCEEEEECCTTSTTTTTTSS
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--H---HHHHHHHH----hCCcEEEEEccCCCHHHHHHHH
Confidence            4689999999999999999999999999999999999742  2   23334444    5667889999999999887766


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      +     ++++|+||||||+... .++.+++.++|
T Consensus        76 ~-----~g~iDiLVNNAGi~~~-~~~~~~~~~~w  103 (247)
T 4hp8_A           76 T-----DAGFDILVNNAGIIRR-ADSVEFSELDW  103 (247)
T ss_dssp             T-----TTCCCEEEECCCCCCC-CCGGGCCHHHH
T ss_pred             H-----hCCCCEEEECCCCCCC-CCcccccHHHH
Confidence            4     4799999999999876 78999988765

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.81  E-value=1.8e-19  Score=133.45  Aligned_cols=106  Identities=28%  Similarity=0.356  Sum_probs=86.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+|++|||||++|||+++|++|++.|++|++++++  ..+.+.+..+++..    .+.++.++.+|++|.++++++++
T Consensus        26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~   99 (280)
T 4da9_A           26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIG--DAEGVAPVIAELSG----LGARVIFLRADLADLSSHQATVD   99 (280)
T ss_dssp             CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC--CHHHHHHHHHHHHH----TTCCEEEEECCTTSGGGHHHHHH
T ss_pred             ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCC--CHHHHHHHHHHHHh----cCCcEEEEEecCCCHHHHHHHHH
Confidence            4688999999999999999999999999999999874  24455556666655    56678899999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCC-CCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQY-ECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~-~~~~~~~~s~~~  148 (149)
                      ++.+.++++|+||||||+.. ...++.+.+.++
T Consensus       100 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~  132 (280)
T 4da9_A          100 AVVAEFGRIDCLVNNAGIASIVRDDFLDLKPEN  132 (280)
T ss_dssp             HHHHHHSCCCEEEEECC------CCGGGCCHHH
T ss_pred             HHHHHcCCCCEEEECCCccccCCCChhhCCHHH
Confidence            99999999999999999842 225677766554

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.81  E-value=2.3e-19  Score=130.09  Aligned_cols=104  Identities=30%  Similarity=0.347  Sum_probs=87.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+   ...+.+..+++..    .+.++.++.+|+++.++++++++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~---~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   74 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATS---QASAEKFENSMKE----KGFKARGLVLNISDIESIQNFFA   74 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHh----cCCceEEEEecCCCHHHHHHHHH
Confidence            3678999999999999999999999999999999997   4445555555554    45678899999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.++++|+||||||+... .++.+.+.++
T Consensus        75 ~~~~~~~~id~li~~Ag~~~~-~~~~~~~~~~  105 (247)
T 3lyl_A           75 EIKAENLAIDILVNNAGITRD-NLMMRMSEDE  105 (247)
T ss_dssp             HHHHTTCCCSEEEECCCCCCC-CCGGGCCHHH
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CchhhCCHHH
Confidence            999999999999999999765 5666665543

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.81  E-value=7e-20  Score=133.60  Aligned_cols=103  Identities=20%  Similarity=0.380  Sum_probs=83.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||+++|++|++.|++|++++|+   .+.+.+..+++..... ....+.++.+|+++.+++.++++
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~   79 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARS---KQNLEKVHDEIMRSNK-HVQEPIVLPLDITDCTKADTEIK   79 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESC---HHHHHHHHHHHHHHCT-TSCCCEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHHhcc-ccCcceEEeccCCCHHHHHHHHH
Confidence            4678999999999999999999999999999999997   3444445555543111 22567899999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      ++.+.++++|+||||||+... .++ +.+
T Consensus        80 ~~~~~~g~iD~lvnnAg~~~~-~~~-~~~  106 (250)
T 3nyw_A           80 DIHQKYGAVDILVNAAAMFMD-GSL-SEP  106 (250)
T ss_dssp             HHHHHHCCEEEEEECCCCCCC-CCC-SCH
T ss_pred             HHHHhcCCCCEEEECCCcCCC-CCC-CCC
Confidence            999999999999999999765 444 444

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.81  E-value=1.9e-19  Score=132.50  Aligned_cols=105  Identities=29%  Similarity=0.439  Sum_probs=85.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++|||||++|||++++++|++.|++|++++|+   ...+.+..+++...   .+.++.++.+|+++.++++.++
T Consensus        17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~   90 (267)
T 1vl8_A           17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN---LEEASEAAQKLTEK---YGVETMAFRCDVSNYEEVKKLL   90 (267)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHH---HCCCEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHH
Confidence            35789999999999999999999999999999999997   33444444444111   2446778899999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +++.+.++++|+||||||+... .++.+.+.+
T Consensus        91 ~~~~~~~g~iD~lvnnAg~~~~-~~~~~~~~~  121 (267)
T 1vl8_A           91 EAVKEKFGKLDTVVNAAGINRR-HPAEEFPLD  121 (267)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCC-CCGGGCCHH
T ss_pred             HHHHHHcCCCCEEEECCCcCCC-CChhhCCHH
Confidence            9999999999999999998764 566666544

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.81  E-value=2e-19  Score=130.90  Aligned_cols=104  Identities=28%  Similarity=0.415  Sum_probs=86.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||+++|++|++.|++|++++|+   .+.+.+..+++..    .+..+.++.+|++|.++++++++
T Consensus         6 ~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   78 (253)
T 3qiv_A            6 RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADIN---AEAAEAVAKQIVA----DGGTAISVAVDVSDPESAKAMAD   78 (253)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCEEEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC---HHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHH
Confidence            5789999999999999999999999999999999996   4455555566655    45678889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCC--CCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE--CGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~--~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||||+...  ..++.+.+.+
T Consensus        79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~  111 (253)
T 3qiv_A           79 RTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPE  111 (253)
T ss_dssp             HHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHH
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCCcccccCCHH
Confidence            999999999999999998432  2345555443

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.81  E-value=2.4e-19  Score=132.82  Aligned_cols=106  Identities=23%  Similarity=0.353  Sum_probs=87.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||+++|++|++.|++|++++|+.  ...+.+..+++...   .+..+.++.+|++|.++++++++
T Consensus        22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~--~~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~   96 (281)
T 3v2h_A           22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGA--PDEIRTVTDEVAGL---SSGTVLHHPADMTKPSEIADMMA   96 (281)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCC--HHHHHHHHHHHHTT---CSSCEEEECCCTTCHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC--hHHHHHHHHHHhhc---cCCcEEEEeCCCCCHHHHHHHHH
Confidence            47889999999999999999999999999999999852  33444455555431   24578889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.++++|+||||||+... .++.+.+.++
T Consensus        97 ~~~~~~g~iD~lv~nAg~~~~-~~~~~~~~~~  127 (281)
T 3v2h_A           97 MVADRFGGADILVNNAGVQFV-EKIEDFPVEQ  127 (281)
T ss_dssp             HHHHHTSSCSEEEECCCCCCC-CCGGGCCHHH
T ss_pred             HHHHHCCCCCEEEECCCCCCC-CCcccCCHHH
Confidence            999999999999999999765 6777766554

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.81  E-value=2.3e-19  Score=130.63  Aligned_cols=101  Identities=29%  Similarity=0.454  Sum_probs=84.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||+++|++|++.|++|++++|+   ...+.+..+++..       ...++.+|++|.++++++++
T Consensus         6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~-------~~~~~~~Dv~d~~~v~~~~~   75 (248)
T 3op4_A            6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATS---ESGAQAISDYLGD-------NGKGMALNVTNPESIEAVLK   75 (248)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHHGG-------GEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhcc-------cceEEEEeCCCHHHHHHHHH
Confidence            5789999999999999999999999999999999986   3344444444332       35678999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.++++++|+||||||+... .++.+.+.++
T Consensus        76 ~~~~~~g~iD~lv~nAg~~~~-~~~~~~~~~~  106 (248)
T 3op4_A           76 AITDEFGGVDILVNNAGITRD-NLLMRMKEEE  106 (248)
T ss_dssp             HHHHHHCCCSEEEECCCCCCC-CCGGGCCHHH
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CChhhCCHHH
Confidence            999999999999999999765 6777776554

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.81  E-value=2.6e-19  Score=130.89  Aligned_cols=105  Identities=32%  Similarity=0.418  Sum_probs=86.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++||||+++|||++++++|++.|++|++++|+   .+.+.+..+++..    .+..+.++.+|+++.++++.++
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~~   82 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRK---QENVDRTVATLQG----EGLSVTGTVCHVGKAEDRERLV   82 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHh----cCCceEEEEccCCCHHHHHHHH
Confidence            34788999999999999999999999999999999997   3344445555554    3556788899999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +++.+.++++|+||||||+.....++.+.+.+
T Consensus        83 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~  114 (260)
T 2zat_A           83 AMAVNLHGGVDILVSNAAVNPFFGNIIDATEE  114 (260)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCBCGGGCCHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCcccCCHH
Confidence            99999999999999999986433456665544

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.81  E-value=2.1e-19  Score=131.64  Aligned_cols=102  Identities=26%  Similarity=0.432  Sum_probs=85.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEE-ecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFT-YVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      ++|++|||||++|||++++++|++.|++|+++ .|+   ...+.+..+++..    .+.++.++.+|++|.+++++++++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~---~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~   75 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARS---KKAALETAEEIEK----LGVKVLVVKANVGQPAKIKEMFQQ   75 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSC---HHHHHHHHHHHHT----TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHHHH
Confidence            57899999999999999999999999999887 665   4445555555554    456788999999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +.+.++++|+||||||+... .++.+.+.++
T Consensus        76 ~~~~~g~id~lv~nAg~~~~-~~~~~~~~~~  105 (258)
T 3oid_A           76 IDETFGRLDVFVNNAASGVL-RPVMELEETH  105 (258)
T ss_dssp             HHHHHSCCCEEEECCCCCCC-SCGGGCCHHH
T ss_pred             HHHHcCCCCEEEECCCCCCC-CChhhCCHHH
Confidence            99999999999999998665 6777766554

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.81  E-value=5.8e-19  Score=130.10  Aligned_cols=104  Identities=32%  Similarity=0.446  Sum_probs=87.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+   .+.+.+..+++..    .+..+.++.+|+++.++++.+++
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   90 (273)
T 1ae1_A           18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRN---EKELDECLEIWRE----KGLNVEGSVCDLLSRTERDKLMQ   90 (273)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHh----cCCceEEEECCCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999997   3444455555554    35567889999999999999999


Q ss_pred             HHHHhc-CCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAY-DRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~-g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.+ +++|+||||||+... .++.+.+.++
T Consensus        91 ~~~~~~~g~id~lv~nAg~~~~-~~~~~~~~~~  122 (273)
T 1ae1_A           91 TVAHVFDGKLNILVNNAGVVIH-KEAKDFTEKD  122 (273)
T ss_dssp             HHHHHTTSCCCEEEECCCCCCC-CCTTTCCHHH
T ss_pred             HHHHHcCCCCcEEEECCCCCCC-CChhhCCHHH
Confidence            999999 899999999998754 5666666543

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.81  E-value=2.3e-19  Score=130.53  Aligned_cols=101  Identities=35%  Similarity=0.443  Sum_probs=85.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+   .+.+.+..+++       +..+.++.+|++|.++++++++
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~   72 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDIN---AEGAKAAAASI-------GKKARAIAADISDPGSVKALFA   72 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC---HHHHHHHHHHH-------CTTEEECCCCTTCHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHh-------CCceEEEEcCCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999987   33444443333       3457888999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.+|++|+||||||+... .++.+.+.++
T Consensus        73 ~~~~~~g~id~lv~nAg~~~~-~~~~~~~~~~  103 (247)
T 3rwb_A           73 EIQALTGGIDILVNNASIVPF-VAWDDVDLDH  103 (247)
T ss_dssp             HHHHHHSCCSEEEECCCCCCC-CCGGGCCHHH
T ss_pred             HHHHHCCCCCEEEECCCCCCC-CCcccCCHHH
Confidence            999999999999999999765 6777776554

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.80  E-value=2.6e-19  Score=134.88  Aligned_cols=107  Identities=24%  Similarity=0.404  Sum_probs=87.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+.+|++|||||++|||++++++|++.|++|++++|+   ...+.+..+++....  .+..+.++.+|+++.+++..++
T Consensus         4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~---~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~   78 (319)
T 3ioy_A            4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIR---QDSIDKALATLEAEG--SGPEVMGVQLDVASREGFKMAA   78 (319)
T ss_dssp             CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHHT--CGGGEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHhcC--CCCeEEEEECCCCCHHHHHHHH
Confidence            35789999999999999999999999999999999997   444455555554310  1226788999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +.+.+.++++|+||||||+... .++.+.+.++
T Consensus        79 ~~~~~~~g~id~lv~nAg~~~~-~~~~~~~~~~  110 (319)
T 3ioy_A           79 DEVEARFGPVSILCNNAGVNLF-QPIEESSYDD  110 (319)
T ss_dssp             HHHHHHTCCEEEEEECCCCCCC-CCGGGCCHHH
T ss_pred             HHHHHhCCCCCEEEECCCcCCC-CCcccCCHHH
Confidence            9999999999999999999765 6777666543

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.80  E-value=2.6e-19  Score=131.46  Aligned_cols=106  Identities=25%  Similarity=0.371  Sum_probs=84.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+   .+.+.+..+++....  .+.++.++.+|+++.++++++++
T Consensus        10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~   84 (267)
T 1iy8_A           10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS---SEGLEASKAAVLETA--PDAEVLTTVADVSDEAQVEAYVT   84 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHHC--TTCCEEEEECCTTSHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHhhc--CCceEEEEEccCCCHHHHHHHHH
Confidence            4788999999999999999999999999999999997   334444444443310  14567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.++++++|+||||||+.....++.+.+.+
T Consensus        85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~  115 (267)
T 1iy8_A           85 ATTERFGRIDGFFNNAGIEGKQNPTESFTAA  115 (267)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCBCGGGSCHH
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCCcccCCHH
Confidence            9999999999999999986532455555544

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.80  E-value=4.9e-19  Score=129.55  Aligned_cols=103  Identities=29%  Similarity=0.389  Sum_probs=85.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||++++++|++.|++|++++|+   .+.+.+..+++..    .+.++.++.+|+++.++++.+++
T Consensus         6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   78 (260)
T 2ae2_A            6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRN---QKELNDCLTQWRS----KGFKVEASVCDLSSRSERQELMN   78 (260)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHHH
Confidence            4788999999999999999999999999999999997   3444445555544    34567889999999999999999


Q ss_pred             HHHHhc-CCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAY-DRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~-g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.+ +++|+||||||+... .++.+.+.+
T Consensus        79 ~~~~~~~g~id~lv~~Ag~~~~-~~~~~~~~~  109 (260)
T 2ae2_A           79 TVANHFHGKLNILVNNAGIVIY-KEAKDYTVE  109 (260)
T ss_dssp             HHHHHTTTCCCEEEECCCCCCC-CCGGGCCHH
T ss_pred             HHHHHcCCCCCEEEECCCCCCC-CChhhCCHH
Confidence            999999 899999999998754 566666544

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.80  E-value=4.5e-19  Score=131.05  Aligned_cols=103  Identities=32%  Similarity=0.456  Sum_probs=85.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+   .+.+.+..+++..    .+ ++.++.+|++|.++++++++
T Consensus        26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~---~~~~~~~~~~l~~----~~-~~~~~~~Dv~d~~~v~~~~~   97 (276)
T 2b4q_A           26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARD---AEACADTATRLSA----YG-DCQAIPADLSSEAGARRLAQ   97 (276)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC---HHHHHHHHHHHTT----SS-CEEECCCCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHh----cC-ceEEEEeeCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999986   3344444444432    23 67788899999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.++++|+||||||+... .++.+.+.++
T Consensus        98 ~~~~~~g~iD~lvnnAg~~~~-~~~~~~~~~~  128 (276)
T 2b4q_A           98 ALGELSARLDILVNNAGTSWG-AALESYPVSG  128 (276)
T ss_dssp             HHHHHCSCCSEEEECCCCCCC-CCTTSCCSHH
T ss_pred             HHHHhcCCCCEEEECCCCCCC-CCcccCCHHH
Confidence            999999999999999998765 5677776554

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.80  E-value=3e-19  Score=132.12  Aligned_cols=102  Identities=31%  Similarity=0.494  Sum_probs=84.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++|||||++|||+++|++|++.|++|++++|+   ...+.+..+++       +..+.++.+|+++.+++++++
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~   92 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVN---EDAAVRVANEI-------GSKAFGVRVDVSSAKDAESMV   92 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHH-------CTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHh-------CCceEEEEecCCCHHHHHHHH
Confidence            45789999999999999999999999999999999986   33333333332       345788999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++.+.++++|+||||||+... .++.+.+.++
T Consensus        93 ~~~~~~~g~iD~lv~nAg~~~~-~~~~~~~~~~  124 (277)
T 4dqx_A           93 EKTTAKWGRVDVLVNNAGFGTT-GNVVTIPEET  124 (277)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCC-BCTTTSCHHH
T ss_pred             HHHHHHcCCCCEEEECCCcCCC-CCcccCCHHH
Confidence            9999999999999999998765 5676666544

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.80  E-value=2.6e-19  Score=130.91  Aligned_cols=102  Identities=21%  Similarity=0.256  Sum_probs=85.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++|||||++|||+++|++|++.|++|++++|+   .+.+.+..+++       +.++.++.+|++|.++++.++
T Consensus         4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~   73 (255)
T 4eso_A            4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRN---ESNIARIREEF-------GPRVHALRSDIADLNEIAVLG   73 (255)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHH-------GGGEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHh-------CCcceEEEccCCCHHHHHHHH
Confidence            35789999999999999999999999999999999997   33444443333       235788999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++.+.++++|+||||||+... .++.+.+.++
T Consensus        74 ~~~~~~~g~id~lv~nAg~~~~-~~~~~~~~~~  105 (255)
T 4eso_A           74 AAAGQTLGAIDLLHINAGVSEL-EPFDQVSEAS  105 (255)
T ss_dssp             HHHHHHHSSEEEEEECCCCCCC-BCGGGCCHHH
T ss_pred             HHHHHHhCCCCEEEECCCCCCC-CChhhCCHHH
Confidence            9999999999999999999765 6777766554

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.80  E-value=7.9e-19  Score=128.66  Aligned_cols=106  Identities=27%  Similarity=0.370  Sum_probs=88.2

Q ss_pred             CCCCCCEEEEecCC-ChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           36 NKLRGMVALVTGGD-SGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        36 ~~~~~~~~litG~s-~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      ..+++|++||||++ +|||++++++|++.|++|++++|+   ...+.+..+++...   ...++.++.+|+++.++++++
T Consensus        18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~   91 (266)
T 3o38_A           18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYH---ERRLGETRDQLADL---GLGRVEAVVCDVTSTEAVDAL   91 (266)
T ss_dssp             STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHTT---CSSCEEEEECCTTCHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCC---HHHHHHHHHHHHhc---CCCceEEEEeCCCCHHHHHHH
Confidence            35789999999997 599999999999999999999997   44455555555431   345788999999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++++.++++++|+||||||+... .++.+.+.++
T Consensus        92 ~~~~~~~~g~id~li~~Ag~~~~-~~~~~~~~~~  124 (266)
T 3o38_A           92 ITQTVEKAGRLDVLVNNAGLGGQ-TPVVDMTDEE  124 (266)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCC-CCGGGCCHHH
T ss_pred             HHHHHHHhCCCcEEEECCCcCCC-CCcccCCHHH
Confidence            99999999999999999998765 6677666543

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.80  E-value=1.9e-19  Score=129.74  Aligned_cols=103  Identities=21%  Similarity=0.352  Sum_probs=84.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      ++|++|||||++|||++++++|++.|++|++++|+   .+.+.+..+++...   .+.++.++.+|+++.+++.++++++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~   74 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARS---VDRLEKIAHELMQE---QGVEVFYHHLDVSKAESVEEFSKKV   74 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHH---HCCCEEEEECCTTCHHHHHHHCC-H
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHhh---cCCeEEEEEeccCCHHHHHHHHHHH
Confidence            36899999999999999999999999999999997   44444555555421   3567889999999999999999999


Q ss_pred             HHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          119 VNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      .+.++++|+||||||+... .++.+.+.++
T Consensus        75 ~~~~g~id~li~~Ag~~~~-~~~~~~~~~~  103 (235)
T 3l77_A           75 LERFGDVDVVVANAGLGYF-KRLEELSEEE  103 (235)
T ss_dssp             HHHHSSCSEEEECCCCCCC-CCTTTSCHHH
T ss_pred             HHhcCCCCEEEECCccccc-cCcccCCHHH
Confidence            9999999999999999765 6777766554

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.80  E-value=2.1e-19  Score=132.64  Aligned_cols=102  Identities=27%  Similarity=0.414  Sum_probs=83.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+|++|||||++|||+++|++|++.|++|++++|+   .+.+.+..+++       +.++.++.+|++|.++++++++
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~   94 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRR---LDALQETAAEI-------GDDALCVPTDVTDPDSVRALFT   94 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHH-------TSCCEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHh-------CCCeEEEEecCCCHHHHHHHHH
Confidence            4678999999999999999999999999999999997   34444444433       2457889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.+|++|+||||||+.....++.+.+.++
T Consensus        95 ~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~  126 (272)
T 4dyv_A           95 ATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQ  126 (272)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCSSCGGGCCHHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCChhhCCHHH
Confidence            99999999999999999976545677776554

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.80  E-value=4.8e-19  Score=131.11  Aligned_cols=105  Identities=29%  Similarity=0.541  Sum_probs=86.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+.  ........+++..    .+.++.++.+|+++.+++..+++
T Consensus        26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   99 (283)
T 1g0o_A           26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANS--TESAEEVVAAIKK----NGSDAACVKANVGVVEDIVRMFE   99 (283)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc--hHHHHHHHHHHHH----hCCCeEEEEcCCCCHHHHHHHHH
Confidence            47899999999999999999999999999999999873  2223334444544    45578889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.++++|+||||||+... .++.+.+.++
T Consensus       100 ~~~~~~g~iD~lv~~Ag~~~~-~~~~~~~~~~  130 (283)
T 1g0o_A          100 EAVKIFGKLDIVCSNSGVVSF-GHVKDVTPEE  130 (283)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC-CCGGGCCHHH
T ss_pred             HHHHHcCCCCEEEECCCcCCC-CCcccCCHHH
Confidence            999999999999999998765 5666665543

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.80  E-value=1.9e-19  Score=132.47  Aligned_cols=101  Identities=34%  Similarity=0.480  Sum_probs=81.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++|||||++|||+++|++|++.|++|++++|+   ...+.+..++       .+..+.++.+|++|.+++++++
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~-------~~~~~~~~~~Dv~d~~~v~~~~   92 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTR---EDKLKEIAAD-------LGKDVFVFSANLSDRKSIKQLA   92 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHH-------HCSSEEEEECCTTSHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHH-------hCCceEEEEeecCCHHHHHHHH
Confidence            46889999999999999999999999999999999986   3334333332       2346788999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +++.+.++++|+||||||+... .++.+.+.+
T Consensus        93 ~~~~~~~g~iD~lvnnAg~~~~-~~~~~~~~~  123 (266)
T 3grp_A           93 EVAEREMEGIDILVNNAGITRD-GLFVRMQDQ  123 (266)
T ss_dssp             HHHHHHHTSCCEEEECCCCC------CCCHHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCC-CCcccCCHH
Confidence            9999999999999999999765 566665544

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.80  E-value=3.8e-19  Score=129.13  Aligned_cols=103  Identities=34%  Similarity=0.587  Sum_probs=84.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|++||||+++|||++++++|++.|++|++++|+  ....+.+..+++..    .+.++.++.+|++|.+++++++++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~   75 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAG--NEQKANEVVDEIKK----LGSDAIAVRADVANAEDVTNMVKQ   75 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC--CHHHHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHHHH
Confidence            568999999999999999999999999999999983  13344445555544    345678899999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +.+.++++|+||||||+... .++.+.+.+
T Consensus        76 ~~~~~g~id~lv~nAg~~~~-~~~~~~~~~  104 (246)
T 2uvd_A           76 TVDVFGQVDILVNNAGVTKD-NLLMRMKEE  104 (246)
T ss_dssp             HHHHHSCCCEEEECCCCCCC-BCGGGCCHH
T ss_pred             HHHHcCCCCEEEECCCCCCC-CChhhCCHH
Confidence            99999999999999998754 566666544

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.80  E-value=8.9e-19  Score=129.42  Aligned_cols=103  Identities=29%  Similarity=0.414  Sum_probs=85.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+   .+.+.+..+++..    .+.++.++.+|+++.++++.+++
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~l~~----~~~~~~~~~~Dv~~~~~v~~~~~   91 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARG---EEGLRTTLKELRE----AGVEADGRTCDVRSVPEIEALVA   91 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHh----cCCceEEEECCCCCHHHHHHHHH
Confidence            3678999999999999999999999999999999997   3444444555544    34567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||||+... .++.+.+.+
T Consensus        92 ~~~~~~g~iD~lv~~Ag~~~~-~~~~~~~~~  121 (277)
T 2rhc_B           92 AVVERYGPVDVLVNNAGRPGG-GATAELADE  121 (277)
T ss_dssp             HHHHHTCSCSEEEECCCCCCC-SCGGGCCHH
T ss_pred             HHHHHhCCCCEEEECCCCCCC-CChhhCCHH
Confidence            999999999999999998754 566666544

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.80  E-value=3.5e-19  Score=130.33  Aligned_cols=101  Identities=30%  Similarity=0.439  Sum_probs=84.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+   .+.+.+..+++       +..+.++.+|+++.++++++++
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~   74 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADID---IERARQAAAEI-------GPAAYAVQMDVTRQDSIDAAIA   74 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHH-------CTTEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHh-------CCCceEEEeeCCCHHHHHHHHH
Confidence            5789999999999999999999999999999999986   34444444433       2356789999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.++++++|+||||||+... .++.+.+.++
T Consensus        75 ~~~~~~g~id~lv~~Ag~~~~-~~~~~~~~~~  105 (259)
T 4e6p_A           75 ATVEHAGGLDILVNNAALFDL-APIVEITRES  105 (259)
T ss_dssp             HHHHHSSSCCEEEECCCCCCC-BCGGGCCHHH
T ss_pred             HHHHHcCCCCEEEECCCcCCC-CCcccCCHHH
Confidence            999999999999999999765 5777766554

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.80  E-value=5.9e-19  Score=129.23  Aligned_cols=104  Identities=29%  Similarity=0.443  Sum_probs=84.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||++++++|++.|++|++++|+   ...+.+..+++...   .+.++.++.+|+++.++++++++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~   77 (263)
T 3ai3_A            4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQ---VDRLHEAARSLKEK---FGVRVLEVAVDVATPEGVDAVVE   77 (263)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHH---HCCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC---HHHHHHHHHHHHHh---cCCceEEEEcCCCCHHHHHHHHH
Confidence            4678999999999999999999999999999999997   33344444444331   14467889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||||+... .++.+.+.+
T Consensus        78 ~~~~~~g~id~lv~~Ag~~~~-~~~~~~~~~  107 (263)
T 3ai3_A           78 SVRSSFGGADILVNNAGTGSN-ETIMEAADE  107 (263)
T ss_dssp             HHHHHHSSCSEEEECCCCCCC-CCTTTCCHH
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CCcccCCHH
Confidence            999999999999999998764 566666544

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.80  E-value=4.9e-19  Score=129.71  Aligned_cols=105  Identities=30%  Similarity=0.412  Sum_probs=86.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||++++++|++.|++|++++|+   .+.+.+..+++..    .+.++.++.+|+++.++++.+++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   76 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMN---REALEKAEASVRE----KGVEARSYVCDVTSEEAVIGTVD   76 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHT----TTSCEEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHh----cCCcEEEEEecCCCHHHHHHHHH
Confidence            4688999999999999999999999999999999987   3444444555543    34567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.++++|+||||||+.....++.+.+.++
T Consensus        77 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~  108 (262)
T 1zem_A           77 SVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDD  108 (262)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCBCGGGCCHHH
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCccccCCHHH
Confidence            99999999999999999862225666665443

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.80  E-value=5.3e-19  Score=130.14  Aligned_cols=104  Identities=21%  Similarity=0.296  Sum_probs=86.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||+++|++|++.|++|++++|+.  ........+.+..    .+.++.++.+|+++.+++.++++
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~   99 (271)
T 4iin_A           26 QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSN--AEVADALKNELEE----KGYKAAVIKFDAASESDFIEAIQ   99 (271)
T ss_dssp             CCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHHHHh----cCCceEEEECCCCCHHHHHHHHH
Confidence            47899999999999999999999999999999999952  3333344444444    45678899999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||||+... .++.+.+.+
T Consensus       100 ~~~~~~g~id~li~nAg~~~~-~~~~~~~~~  129 (271)
T 4iin_A          100 TIVQSDGGLSYLVNNAGVVRD-KLAIKMKTE  129 (271)
T ss_dssp             HHHHHHSSCCEEEECCCCCCC-CCGGGCCHH
T ss_pred             HHHHhcCCCCEEEECCCcCCC-cccccCCHH
Confidence            999999999999999999775 566666544

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.80  E-value=1.2e-18  Score=128.90  Aligned_cols=98  Identities=22%  Similarity=0.335  Sum_probs=82.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC---------ChHHHHHHHHHHHhccCCCCCCceEEEecCC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ---------EDKDAKETLEMLREAKTPDAKDPMAISADLG  106 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~  106 (149)
                      ..+++|++|||||++|||+++|++|++.|++|++++|+..         ....+.+...++..    .+.++.++.+|++
T Consensus         6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~   81 (287)
T 3pxx_A            6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEK----TGRKAYTAEVDVR   81 (287)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHH----TTSCEEEEECCTT
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHh----cCCceEEEEccCC
Confidence            3578999999999999999999999999999999998622         13344444445544    4667889999999


Q ss_pred             ChHHHHHHHHHHHHhcCCccEEEeCCcCCCC
Q 044851          107 FDENCKRVVDEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       107 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~  137 (149)
                      +.++++++++++.+.++++|+||||||+...
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~  112 (287)
T 3pxx_A           82 DRAAVSRELANAVAEFGKLDVVVANAGICPL  112 (287)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCcCcc
Confidence            9999999999999999999999999998754

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.80  E-value=1.1e-19  Score=134.28  Aligned_cols=104  Identities=27%  Similarity=0.374  Sum_probs=86.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++|||||++|||+++|++|++.|++|++++|+.....+   ..+++..    .+..+.++.+|+++.+++..++
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~---~~~~~~~----~~~~~~~~~~Dv~~~~~~~~~~  101 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAA---VQQRIIA----SGGTAQELAGDLSEAGAGTDLI  101 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHH---HHHHHHH----TTCCEEEEECCTTSTTHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHH---HHHHHHh----cCCeEEEEEecCCCHHHHHHHH
Confidence            35789999999999999999999999999999999998554443   3444444    4567889999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++.+. +++|+||||||+... .++.+.+.++
T Consensus       102 ~~~~~~-g~iD~lvnnAg~~~~-~~~~~~~~~~  132 (275)
T 4imr_A          102 ERAEAI-APVDILVINASAQIN-ATLSALTPND  132 (275)
T ss_dssp             HHHHHH-SCCCEEEECCCCCCC-BCGGGCCHHH
T ss_pred             HHHHHh-CCCCEEEECCCCCCC-CCcccCCHHH
Confidence            999887 899999999998765 5677766554

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.80  E-value=3.7e-19  Score=132.57  Aligned_cols=104  Identities=23%  Similarity=0.312  Sum_probs=82.2

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRGMVALVTGGD--SGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~s--~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .+++|++|||||+  +|||+++|++|++.|++|++++|+.    ...+..+++..    ....+.++.+|++|.++++++
T Consensus        28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~----~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~   99 (293)
T 3grk_A           28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGD----ALKKRVEPLAE----ELGAFVAGHCDVADAASIDAV   99 (293)
T ss_dssp             TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSH----HHHHHHHHHHH----HHTCEEEEECCTTCHHHHHHH
T ss_pred             cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCH----HHHHHHHHHHH----hcCCceEEECCCCCHHHHHHH
Confidence            5789999999999  5599999999999999999999862    22233333332    123477899999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCC---CCCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYE---CGSVEDIDESR  148 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~---~~~~~~~s~~~  148 (149)
                      ++++.+.++++|+||||||+...   ..++.+.+.++
T Consensus       100 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~  136 (293)
T 3grk_A          100 FETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEAN  136 (293)
T ss_dssp             HHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHH
T ss_pred             HHHHHHhcCCCCEEEECCccCCcccccccccccCHHH
Confidence            99999999999999999999752   24566665543

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.80  E-value=3.7e-19  Score=128.66  Aligned_cols=99  Identities=20%  Similarity=0.219  Sum_probs=78.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .+|++|||||++|||++++++|++.|++|++++|+   .+.+.+..+++.       ..+.++.+|+++.++++++++++
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~   71 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRR---YQRLQQQELLLG-------NAVIGIVADLAHHEDVDVAFAAA   71 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHG-------GGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHhc-------CCceEEECCCCCHHHHHHHHHHH
Confidence            46899999999999999999999999999999997   344444444432       14788999999999999999999


Q ss_pred             HHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          119 VNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      .+.++++|+||||||+... .++.+.+.++
T Consensus        72 ~~~~g~id~lvnnAg~~~~-~~~~~~~~~~  100 (235)
T 3l6e_A           72 VEWGGLPELVLHCAGTGEF-GPVGVYTAEQ  100 (235)
T ss_dssp             HHHHCSCSEEEEECCCC-------CCCHHH
T ss_pred             HHhcCCCcEEEECCCCCCC-CChHhCCHHH
Confidence            9999999999999999655 5677766544

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.79  E-value=8.1e-19  Score=129.27  Aligned_cols=102  Identities=23%  Similarity=0.333  Sum_probs=83.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||+++|++|++.|++|++++|+.....+   ..+++       +..+.++.+|+++.++++++++
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~---~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~   77 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAG---AAASV-------GRGAVHHVVDLTNEVSVRALID   77 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHH---HHHHH-------CTTCEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHH---HHHHh-------CCCeEEEECCCCCHHHHHHHHH
Confidence            5789999999999999999999999999999999998554333   33222       3457889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCC-CCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE-CGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~-~~~~~~~s~~~  148 (149)
                      ++.++++++|+||||||+... ...+.+.+.++
T Consensus        78 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~  110 (271)
T 3tzq_B           78 FTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDV  110 (271)
T ss_dssp             HHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCccccCCHHH
Confidence            999999999999999998743 34566665543

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.79  E-value=1.3e-19  Score=132.86  Aligned_cols=107  Identities=27%  Similarity=0.435  Sum_probs=86.8

Q ss_pred             CCCCCCEEEEecCC--ChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHH
Q 044851           36 NKLRGMVALVTGGD--SGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKR  113 (149)
Q Consensus        36 ~~~~~~~~litG~s--~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  113 (149)
                      ..+++|++|||||+  +|||+++|++|++.|++|++++++....  ..+..+++...   .+.++.++.+|+++.+++++
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~--~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~   90 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQG--AEENVKELEKT---YGIKAKAYKCQVDSYESCEK   90 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSH--HHHHHHHHHHH---HCCCEECCBCCTTCHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchh--HHHHHHHHHHh---cCCceeEEecCCCCHHHHHH
Confidence            45789999999999  8999999999999999999999875432  23344444321   24568889999999999999


Q ss_pred             HHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          114 VVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       114 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++++.+.++++|+||||||+... .++.+.+.++
T Consensus        91 ~~~~~~~~~g~id~li~nAg~~~~-~~~~~~~~~~  124 (267)
T 3gdg_A           91 LVKDVVADFGQIDAFIANAGATAD-SGILDGSVEA  124 (267)
T ss_dssp             HHHHHHHHTSCCSEEEECCCCCCC-SCTTTSCHHH
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCC-CCcccCCHHH
Confidence            999999999999999999999765 5666666543

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.79  E-value=8.6e-19  Score=127.97  Aligned_cols=100  Identities=26%  Similarity=0.386  Sum_probs=83.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +|++||||+++|||++++++|++.|++|++++|+   ...+.+..+++..    .+.++.++.+|++|.++++++++++.
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~~   74 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYN---DATAKAVASEINQ----AGGHAVAVKVDVSDRDQVFAAVEQAR   74 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHh----cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            6889999999999999999999999999999997   3344444455544    34567889999999999999999999


Q ss_pred             HhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          120 NAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +.++++|+||||||+... .++.+.+.+
T Consensus        75 ~~~g~id~lv~nAg~~~~-~~~~~~~~~  101 (256)
T 1geg_A           75 KTLGGFDVIVNNAGVAPS-TPIESITPE  101 (256)
T ss_dssp             HHTTCCCEEEECCCCCCC-BCGGGCCHH
T ss_pred             HHhCCCCEEEECCCCCCC-CChhhCCHH
Confidence            999999999999998654 566666544

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.79  E-value=8.1e-19  Score=128.82  Aligned_cols=105  Identities=23%  Similarity=0.376  Sum_probs=85.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||+++|++|++.|++|+++.++  ......+..+++..    .+..+.++.+|+++.+++.++++
T Consensus        23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r--~~~~~~~~~~~l~~----~~~~~~~~~~Dl~~~~~~~~~~~   96 (267)
T 4iiu_A           23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHR--DAAGAQETLNAIVA----NGGNGRLLSFDVANREQCREVLE   96 (267)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC--chHHHHHHHHHHHh----cCCceEEEEecCCCHHHHHHHHH
Confidence            4678999999999999999999999999998776554  24445556666655    45678899999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.++++|+||||||+... .++.+.+.++
T Consensus        97 ~~~~~~g~id~li~nAg~~~~-~~~~~~~~~~  127 (267)
T 4iiu_A           97 HEIAQHGAWYGVVSNAGIARD-AAFPALSNDD  127 (267)
T ss_dssp             HHHHHHCCCSEEEECCCCCCC-CCGGGCCHHH
T ss_pred             HHHHHhCCccEEEECCCCCCC-CccccCCHHH
Confidence            999999999999999999765 5666665543

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.79  E-value=5.1e-19  Score=128.95  Aligned_cols=104  Identities=25%  Similarity=0.322  Sum_probs=83.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEe-cCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTY-VKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ...+|++|||||++|||+++|++|++.|++|++++ ++...   ..+..+++..    .+.++.++.+|+++.+++++++
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~---~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~   82 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPR---RVKWLEDQKA----LGFDFYASEGNVGDWDSTKQAF   82 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSS---HHHHHHHHHH----TTCCCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHH---HHHHHHHHHh----cCCeeEEEecCCCCHHHHHHHH
Confidence            46889999999999999999999999999999888 44332   2333444444    4567889999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++.+.++++|+||||||+... .++.+.+.++
T Consensus        83 ~~~~~~~g~id~lv~~Ag~~~~-~~~~~~~~~~  114 (256)
T 3ezl_A           83 DKVKAEVGEIDVLVNNAGITRD-VVFRKMTRED  114 (256)
T ss_dssp             HHHHHHTCCEEEEEECCCCCCC-CCTTTCCHHH
T ss_pred             HHHHHhcCCCCEEEECCCCCCC-CchhhCCHHH
Confidence            9999999999999999999765 5676666543

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.79  E-value=7e-19  Score=129.46  Aligned_cols=105  Identities=30%  Similarity=0.445  Sum_probs=85.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      ..+|++|||||++|||+++|++|++.|++|++++.+  ..+.+....+++..    .+.++.++.+|+++.+++++++++
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~v~~~~~~   97 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAA--NREAADAVVAAITE----SGGEAVAIPGDVGNAADIAAMFSA   97 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHH----TTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC--ChhHHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHHHH
Confidence            357899999999999999999999999999877443  23444455555554    456788999999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +.+.++++|+||||||+.....++.+.+.++
T Consensus        98 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~  128 (272)
T 4e3z_A           98 VDRQFGRLDGLVNNAGIVDYPQRVDEMSVER  128 (272)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCCGGGCCHHH
T ss_pred             HHHhCCCCCEEEECCCCCCCCCChhhCCHHH
Confidence            9999999999999999976545666666543

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.79  E-value=7.5e-19  Score=128.41  Aligned_cols=103  Identities=28%  Similarity=0.448  Sum_probs=84.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +|++||||+++|||++++++|++.|++|++++|+... ..+.+..+++..    .+.++.++.+|+++.++++++++++.
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~   76 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQE-EQAAETIKLIEA----ADQKAVFVGLDVTDKANFDSAIDEAA   76 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGH-HHHHHHHHHHHT----TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcch-HHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            6899999999999999999999999999999986322 114444455543    34568889999999999999999999


Q ss_pred             HhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          120 NAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++++++|+||||||+... .++.+.+.++
T Consensus        77 ~~~g~iD~lv~nAg~~~~-~~~~~~~~~~  104 (258)
T 3a28_C           77 EKLGGFDVLVNNAGIAQI-KPLLEVTEED  104 (258)
T ss_dssp             HHHTCCCEEEECCCCCCC-CCGGGCCHHH
T ss_pred             HHhCCCCEEEECCCCCCC-CChhhCCHHH
Confidence            999999999999998765 5666666543

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.79  E-value=7.4e-19  Score=129.90  Aligned_cols=103  Identities=25%  Similarity=0.434  Sum_probs=83.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCC---CceEEEecCCChHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK---DPMAISADLGFDENCKR  113 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~  113 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+   .+.+.+..+++..    .+.   ++.++.+|+++.++++.
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~----~~~~~~~~~~~~~Dv~~~~~v~~   75 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRS---SERLEETRQIILK----SGVSEKQVNSVVADVTTEDGQDQ   75 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHT----TTCCGGGEEEEECCTTSHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHH----cCCCCcceEEEEecCCCHHHHHH
Confidence            3678999999999999999999999999999999997   3344444455543    233   57889999999999999


Q ss_pred             HHHHHHHhcCCccEEEeCCcCCCCCCC----CCCCCCC
Q 044851          114 VVDEVVNAYDRIDILVNNAAEQYECGS----VEDIDES  147 (149)
Q Consensus       114 ~~~~~~~~~g~id~li~~ag~~~~~~~----~~~~s~~  147 (149)
                      +++++.++++++|+||||||+... .+    +.+.+.+
T Consensus        76 ~~~~~~~~~g~iD~lv~nAg~~~~-~~~~~~~~~~~~~  112 (280)
T 1xkq_A           76 IINSTLKQFGKIDVLVNNAGAAIP-DAFGTTGTDQGID  112 (280)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCC-CTTCCCGGGSCHH
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCC-CCCCcccccCCHH
Confidence            999999999999999999998654 44    4554433

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.79  E-value=8.1e-19  Score=128.21  Aligned_cols=101  Identities=28%  Similarity=0.457  Sum_probs=84.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||+++|++|++.|++|++++|+   ...+.+..+++       +..+.++.+|+++.++++++++
T Consensus         6 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~   75 (261)
T 3n74_A            6 SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRD---KAGAERVAGEI-------GDAALAVAADISKEADVDAAVE   75 (261)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHH-------CTTEEEEECCTTSHHHHHHHHH
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC---HHHHHHHHHHh-------CCceEEEEecCCCHHHHHHHHH
Confidence            5789999999999999999999999999999999997   33343333332       3457889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||||+.....++.+.+.+
T Consensus        76 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~  106 (261)
T 3n74_A           76 AALSKFGKVDILVNNAGIGHKPQNAELVEPE  106 (261)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCSCCGGGSCHH
T ss_pred             HHHHhcCCCCEEEECCccCCCCCCcccCCHH
Confidence            9999999999999999987643566665544

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.79  E-value=1.5e-18  Score=125.67  Aligned_cols=106  Identities=25%  Similarity=0.417  Sum_probs=86.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecC--CChHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADL--GFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv--~~~~~v~~~  114 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+   ...+.+..+++...   ......++.+|+  ++.+++..+
T Consensus        11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~---~~~~~~~~~~d~d~~~~~~~~~~   84 (247)
T 3i1j_A           11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRT---EASLAEVSDQIKSA---GQPQPLIIALNLENATAQQYREL   84 (247)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHT---TSCCCEEEECCTTTCCHHHHHHH
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecC---HHHHHHHHHHHHhc---CCCCceEEEeccccCCHHHHHHH
Confidence            4789999999999999999999999999999999997   44455555555541   224566777777  999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++++.+.++++|+||||||+.....++.+.+.++
T Consensus        85 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~  118 (247)
T 3i1j_A           85 AARVEHEFGRLDGLLHNASIIGPRTPLEQLPDED  118 (247)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHH
T ss_pred             HHHHHHhCCCCCEEEECCccCCCCCCcccCCHHH
Confidence            9999999999999999999865546677666543

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.79  E-value=1.5e-18  Score=126.43  Aligned_cols=105  Identities=30%  Similarity=0.378  Sum_probs=85.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++|||||++|||++++++|++.|++|++++|+   ...+.+..+++..    .+.++.++.+|++|.+++++++
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~---~~~~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~~   81 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLD---EAMATKAVEDLRM----EGHDVSSVVMDVTNTESVQNAV   81 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHh----cCCceEEEEecCCCHHHHHHHH
Confidence            34788999999999999999999999999999999997   3334444455544    3456888999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +++.+.++++|+||||||+.....++.+.+.+
T Consensus        82 ~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~  113 (260)
T 3awd_A           82 RSVHEQEGRVDILVACAGICISEVKAEDMTDG  113 (260)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCSCCTTTCCHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCcccCCHH
Confidence            99999999999999999987622456555543

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.79  E-value=9.7e-19  Score=130.46  Aligned_cols=104  Identities=16%  Similarity=0.255  Sum_probs=81.9

Q ss_pred             CCCCCCEEEEecCCC--hHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHH
Q 044851           36 NKLRGMVALVTGGDS--GIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKR  113 (149)
Q Consensus        36 ~~~~~~~~litG~s~--gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  113 (149)
                      ..+++|++|||||++  |||+++|++|++.|++|++++|+....+.+.+..+.        ...+.++.+|++|.+++++
T Consensus        26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~   97 (296)
T 3k31_A           26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAES--------LGVKLTVPCDVSDAESVDN   97 (296)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH--------HTCCEEEECCTTCHHHHHH
T ss_pred             hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh--------cCCeEEEEcCCCCHHHHHH
Confidence            357899999999986  999999999999999999999974322222222221        1235789999999999999


Q ss_pred             HHHHHHHhcCCccEEEeCCcCCCC---CCCCCCCCCC
Q 044851          114 VVDEVVNAYDRIDILVNNAAEQYE---CGSVEDIDES  147 (149)
Q Consensus       114 ~~~~~~~~~g~id~li~~ag~~~~---~~~~~~~s~~  147 (149)
                      +++++.++++++|+||||||+...   ..++.+.+.+
T Consensus        98 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~  134 (296)
T 3k31_A           98 MFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLG  134 (296)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHH
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHH
Confidence            999999999999999999998753   1455565544

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.79  E-value=6.3e-20  Score=136.47  Aligned_cols=107  Identities=21%  Similarity=0.317  Sum_probs=87.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC---cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGA---TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKR  113 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~---~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  113 (149)
                      .+++|++|||||++|||+++|++|++.|+   +|++++|+   .+.+.+..+++....  .+..+.++.+|++|.+++++
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~---~~~~~~~~~~l~~~~--~~~~~~~~~~Dv~d~~~v~~  104 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARR---LEKLEELKKTIDQEF--PNAKVHVAQLDITQAEKIKP  104 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESC---HHHHHHHHHHHHHHC--TTCEEEEEECCTTCGGGHHH
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECC---HHHHHHHHHHHHhhC--CCCeEEEEECCCCCHHHHHH
Confidence            36899999999999999999999999998   89999997   444555555554311  24567889999999999999


Q ss_pred             HHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          114 VVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       114 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++++.+.++++|+||||||+.....++.+.+.++
T Consensus       105 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~  139 (287)
T 3rku_A          105 FIENLPQEFKDIDILVNNAGKALGSDRVGQIATED  139 (287)
T ss_dssp             HHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHH
T ss_pred             HHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHH
Confidence            99999999999999999999876446777776554

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.79  E-value=2.7e-19  Score=130.02  Aligned_cols=92  Identities=32%  Similarity=0.406  Sum_probs=74.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      |+||++||||+++|||+++|++|++.|++|++++|+.....+             .....+..+.+|++|+++++++++ 
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~-------------~~~~~~~~~~~Dv~~~~~v~~~~~-   74 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA-------------PRHPRIRREELDITDSQRLQRLFE-   74 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS-------------CCCTTEEEEECCTTCHHHHHHHHH-
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh-------------hhcCCeEEEEecCCCHHHHHHHHH-
Confidence            689999999999999999999999999999999997433211             034567889999999999877764 


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                         ++|++|+||||||+..   ++.+++.++|
T Consensus        75 ---~~g~iDiLVNNAGi~~---~~~~~~~~~w  100 (242)
T 4b79_A           75 ---ALPRLDVLVNNAGISR---DREEYDLATF  100 (242)
T ss_dssp             ---HCSCCSEEEECCCCCC---GGGGGSHHHH
T ss_pred             ---hcCCCCEEEECCCCCC---CcccCCHHHH
Confidence               5799999999999853   4566665543

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.79  E-value=9.2e-19  Score=130.67  Aligned_cols=103  Identities=27%  Similarity=0.419  Sum_probs=84.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCC---CceEEEecCCChHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK---DPMAISADLGFDENCKR  113 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~  113 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+   .+.+.+..+++..    .+.   ++.++.+|+++.+++++
T Consensus        23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~---~~~~~~~~~~l~~----~~~~~~~~~~~~~Dv~d~~~v~~   95 (297)
T 1xhl_A           23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRN---EDRLEETKQQILK----AGVPAEKINAVVADVTEASGQDD   95 (297)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCCGGGEEEEECCTTSHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHh----cCCCCceEEEEecCCCCHHHHHH
Confidence            3688999999999999999999999999999999997   3444445555544    233   57889999999999999


Q ss_pred             HHHHHHHhcCCccEEEeCCcCCCCCCC--CCCCCCC
Q 044851          114 VVDEVVNAYDRIDILVNNAAEQYECGS--VEDIDES  147 (149)
Q Consensus       114 ~~~~~~~~~g~id~li~~ag~~~~~~~--~~~~s~~  147 (149)
                      +++++.+.++++|+||||||+... .+  +.+.+.+
T Consensus        96 ~~~~~~~~~g~iD~lvnnAG~~~~-~~~~~~~~~~~  130 (297)
T 1xhl_A           96 IINTTLAKFGKIDILVNNAGANLA-DGTANTDQPVE  130 (297)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCC-CSCCGGGSCHH
T ss_pred             HHHHHHHhcCCCCEEEECCCcCcC-CCCccccCCHH
Confidence            999999999999999999998654 44  5555544

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.78  E-value=6.7e-19  Score=128.80  Aligned_cols=104  Identities=33%  Similarity=0.438  Sum_probs=83.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|++||||+++|||++++++|++.|++|++++|+...  .+.+..+++...   .+..+.++.+|++|.++++.++++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~   76 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAA--EIEKVRAGLAAQ---HGVKVLYDGADLSKGEAVRGLVDN   76 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHH--HHHHHHHHHHHH---HTSCEEEECCCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcch--HHHHHHHHHHhc---cCCcEEEEECCCCCHHHHHHHHHH
Confidence            568999999999999999999999999999999987422  134444444321   134677889999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +.+.++++|+||||||+... .++.+.+.+
T Consensus        77 ~~~~~g~iD~lv~~Ag~~~~-~~~~~~~~~  105 (260)
T 1x1t_A           77 AVRQMGRIDILVNNAGIQHT-ALIEDFPTE  105 (260)
T ss_dssp             HHHHHSCCSEEEECCCCCCC-CCGGGCCHH
T ss_pred             HHHhcCCCCEEEECCCCCCC-CChhhCCHH
Confidence            99999999999999998764 566666544

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.78  E-value=1.3e-18  Score=128.42  Aligned_cols=103  Identities=34%  Similarity=0.433  Sum_probs=83.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++|||||++|||+++|++|++.|++|++++|+    +...+..+++..    .+..+.++.+|++|.++++++.
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~----~~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~   98 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT----DGVKEVADEIAD----GGGSAEAVVADLADLEGAANVA   98 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS----THHHHHHHHHHT----TTCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH----HHHHHHHHHHHh----cCCcEEEEEecCCCHHHHHHHH
Confidence            35789999999999999999999999999999999964    233444455544    4566888999999999999995


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      + ..+.++++|+||||||+... .++.+.+.++
T Consensus        99 ~-~~~~~g~iD~lv~nAg~~~~-~~~~~~~~~~  129 (273)
T 3uf0_A           99 E-ELAATRRVDVLVNNAGIIAR-APAEEVSLGR  129 (273)
T ss_dssp             H-HHHHHSCCCEEEECCCCCCC-CCGGGCCHHH
T ss_pred             H-HHHhcCCCcEEEECCCCCCC-CCchhCCHHH
Confidence            4 45667899999999999765 6777776554

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.78  E-value=3.6e-18  Score=125.95  Aligned_cols=97  Identities=26%  Similarity=0.327  Sum_probs=82.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC---------ChHHHHHHHHHHHhccCCCCCCceEEEecCCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ---------EDKDAKETLEMLREAKTPDAKDPMAISADLGF  107 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~  107 (149)
                      .+.+|++|||||++|||+++|++|++.|++|++++|+..         ..+.+.+..+.+..    .+.++.++.+|++|
T Consensus        10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~   85 (278)
T 3sx2_A           10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVED----IGSRIVARQADVRD   85 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHH----HTCCEEEEECCTTC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHh----cCCeEEEEeCCCCC
Confidence            578999999999999999999999999999999998621         23444555555544    45678899999999


Q ss_pred             hHHHHHHHHHHHHhcCCccEEEeCCcCCCC
Q 044851          108 DENCKRVVDEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       108 ~~~v~~~~~~~~~~~g~id~li~~ag~~~~  137 (149)
                      .++++++++++.+.++++|+||||||+...
T Consensus        86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~  115 (278)
T 3sx2_A           86 RESLSAALQAGLDELGRLDIVVANAGIAPM  115 (278)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence            999999999999999999999999998654

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.78  E-value=1.2e-18  Score=129.60  Aligned_cols=102  Identities=27%  Similarity=0.406  Sum_probs=82.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEe-cCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChH------
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTY-VKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDE------  109 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~------  109 (149)
                      .+++|++||||+++|||++++++|++.|++|++++ |+   .+.+.+..+++...   .+.++.++.+|+++.+      
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~---~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~~~~~~   79 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS---AAEANALSATLNAR---RPNSAITVQADLSNVATAPVSG   79 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC---HHHHHHHHHHHHHH---STTCEEEEECCCSSSCBCCCC-
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCC---HHHHHHHHHHHhhh---cCCeeEEEEeecCCcccccccc
Confidence            47889999999999999999999999999999999 86   34445555555411   3456888999999999      


Q ss_pred             -----------HHHHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          110 -----------NCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       110 -----------~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                                 ++..+++++.+.++++|+||||||+... .++.+.+
T Consensus        80 ~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~-~~~~~~~  125 (291)
T 1e7w_A           80 ADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYP-TPLLRND  125 (291)
T ss_dssp             ---CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC-CCCCC--
T ss_pred             cccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCC-CChhhcC
Confidence                       9999999999999999999999998765 5666655

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.78  E-value=1.9e-18  Score=125.77  Aligned_cols=101  Identities=29%  Similarity=0.488  Sum_probs=82.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||++++++|++.|++|++++|+..  +.+.+   ++..    .+.++.++.+|+++.++++.+++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~--~~~~~---~~~~----~~~~~~~~~~Dv~~~~~v~~~~~   74 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEA---AIRN----LGRRVLTVKCDVSQPGDVEAFGK   74 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHH---HHHH----TTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCch--hHHHH---HHHh----cCCcEEEEEeecCCHHHHHHHHH
Confidence            367899999999999999999999999999999999741  22322   2332    34567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||||+... .++.+.+.+
T Consensus        75 ~~~~~~g~id~lv~nAg~~~~-~~~~~~~~~  104 (249)
T 2ew8_A           75 QVISTFGRCDILVNNAGIYPL-IPFDELTFE  104 (249)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC-CCGGGCCHH
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CCcccCCHH
Confidence            999999999999999998765 566666544

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.78  E-value=1.2e-18  Score=131.59  Aligned_cols=106  Identities=22%  Similarity=0.369  Sum_probs=84.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC--ChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ--EDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +.+|++|||||++|||+++|++|++.|++|++++|+..  ....+.+..+.+..    .+..+.++.+|++|.+++.+++
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~----~~~~~~~~~~Dvtd~~~v~~~~   78 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARD----NDVDLRTLELDVQSQVSVDRAI   78 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHH----HTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHh----cCCcEEEEEeecCCHHHHHHHH
Confidence            56889999999999999999999999999999988632  22233333333333    3556889999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++.+++|++|+||||||+... +++.+.+.++
T Consensus        79 ~~~~~~~g~iD~lVnnAG~~~~-~~~~~~~~~~  110 (324)
T 3u9l_A           79 DQIIGEDGRIDVLIHNAGHMVF-GPAEAFTPEQ  110 (324)
T ss_dssp             HHHHHHHSCCSEEEECCCCCBC-SCGGGSCHHH
T ss_pred             HHHHHHcCCCCEEEECCCcCCC-CChhhCCHHH
Confidence            9999999999999999998765 6777766543

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.78  E-value=1.1e-18  Score=127.55  Aligned_cols=91  Identities=27%  Similarity=0.306  Sum_probs=74.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||+++|++|++.|++|++++|+....++   ..++       .+..+.++.+|++|.++++++++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~---~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~   73 (257)
T 3tpc_A            4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEE---PAAE-------LGAAVRFRNADVTNEADATAALA   73 (257)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------------CEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH---HHHH-------hCCceEEEEccCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999998543332   2222       23457889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~  137 (149)
                      ++.++++++|+||||||+...
T Consensus        74 ~~~~~~g~id~lv~nAg~~~~   94 (257)
T 3tpc_A           74 FAKQEFGHVHGLVNCAGTAPG   94 (257)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC
T ss_pred             HHHHHcCCCCEEEECCCCCCC
Confidence            999999999999999999765

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.77  E-value=1.9e-18  Score=127.30  Aligned_cols=102  Identities=27%  Similarity=0.440  Sum_probs=81.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEec-CCCChHHHHHHHHHHHhccCCCCCCceEEEecCCCh----HHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYV-KPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFD----ENCK  112 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~----~~v~  112 (149)
                      +++|++|||||++|||++++++|++.|++|++++| +   ...+.+..+++...   .+..+.++.+|+++.    ++++
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~   82 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHS---EGAAQRLVAELNAA---RAGSAVLCKGDLSLSSSLLDCCE   82 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC---HHHHHHHHHHHHHH---STTCEEEEECCCSSSTTHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC---hHHHHHHHHHHHHh---cCCceEEEeccCCCccccHHHHH
Confidence            67899999999999999999999999999999998 5   33444444555431   145678899999999    9999


Q ss_pred             HHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          113 RVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       113 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      .+++++.+.++++|+||||||+... .++.+.+.
T Consensus        83 ~~~~~~~~~~g~id~lv~nAg~~~~-~~~~~~~~  115 (276)
T 1mxh_A           83 DIIDCSFRAFGRCDVLVNNASAYYP-TPLLPGDD  115 (276)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCC-CCSCC---
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCC-CCccccCc
Confidence            9999999999999999999998765 56666554

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.77  E-value=1.6e-18  Score=126.41  Aligned_cols=100  Identities=28%  Similarity=0.368  Sum_probs=82.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|++||||+++|||++++++|++.|++|++++|+..  .   +..+++..    .+.++.++.+|++|.+++++++++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~---~~~~~l~~----~~~~~~~~~~D~~~~~~v~~~~~~   72 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--A---PALAEIAR----HGVKAVHHPADLSDVAQIEALFAL   72 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--H---HHHHHHHT----TSCCEEEECCCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--H---HHHHHHHh----cCCceEEEeCCCCCHHHHHHHHHH
Confidence            57899999999999999999999999999999999743  2   22333433    345678889999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +.+.++++|+||||||+... .++.+.+.+
T Consensus        73 ~~~~~g~id~lv~~Ag~~~~-~~~~~~~~~  101 (255)
T 2q2v_A           73 AEREFGGVDILVNNAGIQHV-APVEQFPLE  101 (255)
T ss_dssp             HHHHHSSCSEEEECCCCCCC-BCGGGCCHH
T ss_pred             HHHHcCCCCEEEECCCCCCC-CChhhCCHH
Confidence            99999999999999998754 566665544

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.77  E-value=6.2e-18  Score=125.18  Aligned_cols=99  Identities=31%  Similarity=0.448  Sum_probs=81.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||+++|++|++.|++|++++|+   .+.+.+..++       .+..+.++.+|+++.++++++++
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~   71 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKS---AERLRELEVA-------HGGNAVGVVGDVRSLQDQKRAAE   71 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHH-------TBTTEEEEECCTTCHHHHHHHHH
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC---HHHHHHHHHH-------cCCcEEEEEcCCCCHHHHHHHHH
Confidence            3689999999999999999999999999999999986   3333333222       34567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      ++.+.++++|+||||||+.....++.+.+
T Consensus        72 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~  100 (281)
T 3zv4_A           72 RCLAAFGKIDTLIPNAGIWDYSTALADLP  100 (281)
T ss_dssp             HHHHHHSCCCEEECCCCCCCTTCCGGGSC
T ss_pred             HHHHhcCCCCEEEECCCcCccccccccCC
Confidence            99999999999999999875434444433

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.77  E-value=1.5e-18  Score=127.87  Aligned_cols=96  Identities=31%  Similarity=0.415  Sum_probs=80.6

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           35 SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        35 ~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      ...+++|++|||||++|||+++|++|++.|++|++++|+....                 ......+.+|++|.+++.++
T Consensus         9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-----------------~~~~~~~~~Dv~~~~~v~~~   71 (269)
T 3vtz_A            9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD-----------------VNVSDHFKIDVTNEEEVKEA   71 (269)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C-----------------TTSSEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc-----------------cCceeEEEecCCCHHHHHHH
Confidence            3457899999999999999999999999999999999874221                 12457789999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++++.+.++++|+||||||+... .++.+.+.++
T Consensus        72 ~~~~~~~~g~iD~lv~nAg~~~~-~~~~~~~~~~  104 (269)
T 3vtz_A           72 VEKTTKKYGRIDILVNNAGIEQY-SPLHLTPTEI  104 (269)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCC-CCGGGSCHHH
T ss_pred             HHHHHHHcCCCCEEEECCCcCCC-CCcccCCHHH
Confidence            99999999999999999999765 5676666543

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.77  E-value=3.3e-18  Score=125.91  Aligned_cols=101  Identities=22%  Similarity=0.278  Sum_probs=84.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||++++++|++.|++|++++|+   ...+.+..+++..    .+.++.++.+|+++.++++.+++
T Consensus        28 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~---~~~~~~~~~~l~~----~~~~~~~~~~Dl~~~~~v~~~~~  100 (272)
T 1yb1_A           28 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDIN---KHGLEETAAKCKG----LGAKVHTFVVDCSNREDIYSSAK  100 (272)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcC---HHHHHHHHHHHHh----cCCeEEEEEeeCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999997   3344445555554    35578889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      ++.+.++++|+||||||+... .++.+.+
T Consensus       101 ~~~~~~g~iD~li~~Ag~~~~-~~~~~~~  128 (272)
T 1yb1_A          101 KVKAEIGDVSILVNNAGVVYT-SDLFATQ  128 (272)
T ss_dssp             HHHHHTCCCSEEEECCCCCCC-CCCGGGH
T ss_pred             HHHHHCCCCcEEEECCCcCCC-cchhhCC
Confidence            999999999999999998754 4554443

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.77  E-value=5.4e-18  Score=126.14  Aligned_cols=104  Identities=25%  Similarity=0.396  Sum_probs=84.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++|||||++|||++++++|++.|++|++++|+   ...+.+..+++...   .+.++.++.+|+++.++++.++
T Consensus        22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~---~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~~~~~~   95 (302)
T 1w6u_A           22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRK---MDVLKATAEQISSQ---TGNKVHAIQCDVRDPDMVQNTV   95 (302)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHH---HSSCEEEEECCTTCHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHHh---cCCceEEEEeCCCCHHHHHHHH
Confidence            35789999999999999999999999999999999997   33444444444431   1456788999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      +++.+.++++|+||||||+... .++.+.+.
T Consensus        96 ~~~~~~~g~id~li~~Ag~~~~-~~~~~~~~  125 (302)
T 1w6u_A           96 SELIKVAGHPNIVINNAAGNFI-SPTERLSP  125 (302)
T ss_dssp             HHHHHHTCSCSEEEECCCCCCC-SCGGGCCH
T ss_pred             HHHHHHcCCCCEEEECCCCCCC-CccccCCH
Confidence            9999999999999999998654 45555543

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.77  E-value=3.2e-18  Score=125.17  Aligned_cols=104  Identities=18%  Similarity=0.263  Sum_probs=83.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||++++++|++.|++|++++|+   ...+.+..+++....  .+.++.++.+|++|.++++.+++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~   78 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRN---REKLEAAASRIASLV--SGAQVDIVAGDIREPGDIDRLFE   78 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHHS--TTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHhcC--CCCeEEEEEccCCCHHHHHHHHH
Confidence            3678999999999999999999999999999999997   333444444443210  12367889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++ +|+||||||+... .++.+.+.+
T Consensus        79 ~~~~~~g-id~lv~~Ag~~~~-~~~~~~~~~  107 (260)
T 2z1n_A           79 KARDLGG-ADILVYSTGGPRP-GRFMELGVE  107 (260)
T ss_dssp             HHHHTTC-CSEEEECCCCCCC-BCGGGCCHH
T ss_pred             HHHHhcC-CCEEEECCCCCCC-CCcccCCHH
Confidence            9999999 9999999998654 566666544

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.77  E-value=1.7e-18  Score=128.42  Aligned_cols=99  Identities=27%  Similarity=0.453  Sum_probs=80.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCC----hHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGF----DENCK  112 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~----~~~v~  112 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+.  .+.+.+..+++...   .+..+.++.+|+++    .++++
T Consensus        20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~--~~~~~~~~~~l~~~---~~~~~~~~~~Dv~~~~~~~~~v~   94 (288)
T 2x9g_A           20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNS--AEAAVSLADELNKE---RSNTAVVCQADLTNSNVLPASCE   94 (288)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSC--HHHHHHHHHHHHHH---STTCEEEEECCCSCSTTHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCc--hHHHHHHHHHHHhh---cCCceEEEEeecCCccCCHHHHH
Confidence            47889999999999999999999999999999999973  13344444445411   34568889999999    99999


Q ss_pred             HHHHHHHHhcCCccEEEeCCcCCCCCCCC
Q 044851          113 RVVDEVVNAYDRIDILVNNAAEQYECGSV  141 (149)
Q Consensus       113 ~~~~~~~~~~g~id~li~~ag~~~~~~~~  141 (149)
                      .+++++.+.++++|+||||||+... .++
T Consensus        95 ~~~~~~~~~~g~iD~lvnnAG~~~~-~~~  122 (288)
T 2x9g_A           95 EIINSCFRAFGRCDVLVNNASAFYP-TPL  122 (288)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCC-CCS
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCC-Ccc
Confidence            9999999999999999999998764 444

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.77  E-value=1.3e-18  Score=128.73  Aligned_cols=92  Identities=27%  Similarity=0.358  Sum_probs=77.7

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRGMVALVTGGD--SGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~s--~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .+++|++|||||+  +|||+++|++|++.|++|++++|+.     ..+..+++..    ....+.++.+|+++.++++++
T Consensus        23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~l~~----~~~~~~~~~~Dl~~~~~v~~~   93 (280)
T 3nrc_A           23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-----FKDRVEKLCA----EFNPAAVLPCDVISDQEIKDL   93 (280)
T ss_dssp             TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-----CHHHHHHHHG----GGCCSEEEECCTTCHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-----HHHHHHHHHH----hcCCceEEEeecCCHHHHHHH
Confidence            4789999999988  7799999999999999999999974     1233344433    233578999999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~  137 (149)
                      ++++.+.++++|+||||||+...
T Consensus        94 ~~~~~~~~g~id~li~nAg~~~~  116 (280)
T 3nrc_A           94 FVELGKVWDGLDAIVHSIAFAPR  116 (280)
T ss_dssp             HHHHHHHCSSCCEEEECCCCCCG
T ss_pred             HHHHHHHcCCCCEEEECCccCCC
Confidence            99999999999999999998653

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.77  E-value=4e-18  Score=126.78  Aligned_cols=94  Identities=26%  Similarity=0.406  Sum_probs=79.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCCh-HHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFD-ENCKRVV  115 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~  115 (149)
                      .+++|++|||||++|||+++|++|++.|++|++++|+   ...+.+..+++...   .+..+.++.+|+++. ++++.++
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~---~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~~v~~~~   82 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRD---VTKGHEAVEKLKNS---NHENVVFHQLDVTDPIATMSSLA   82 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHTT---TCCSEEEEECCTTSCHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHhc---CCCceEEEEccCCCcHHHHHHHH
Confidence            4678999999999999999999999999999999997   44555566666542   335688899999998 9999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~  136 (149)
                      +.+.+.++++|+||||||+..
T Consensus        83 ~~~~~~~g~iD~lv~nAg~~~  103 (311)
T 3o26_A           83 DFIKTHFGKLDILVNNAGVAG  103 (311)
T ss_dssp             HHHHHHHSSCCEEEECCCCCS
T ss_pred             HHHHHhCCCCCEEEECCcccc
Confidence            999999999999999999864

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.77  E-value=3.7e-18  Score=124.94  Aligned_cols=100  Identities=26%  Similarity=0.381  Sum_probs=81.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||++++++|++.|++|++++|+   ...+.+..++       ....+.++.+|++|.++++.+++
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~-------~~~~~~~~~~D~~d~~~v~~~~~   78 (263)
T 3ak4_A            9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLD---VMAAQAVVAG-------LENGGFAVEVDVTKRASVDAAMQ   78 (263)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHT-------CTTCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHH-------HhcCCeEEEEeCCCHHHHHHHHH
Confidence            4788999999999999999999999999999999986   2333222221       12257788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.++++++|+||||||+... .++.+.+.+
T Consensus        79 ~~~~~~g~iD~lv~~Ag~~~~-~~~~~~~~~  108 (263)
T 3ak4_A           79 KAIDALGGFDLLCANAGVSTM-RPAVDITDE  108 (263)
T ss_dssp             HHHHHHTCCCEEEECCCCCCC-CCGGGCCHH
T ss_pred             HHHHHcCCCCEEEECCCcCCC-CChhhCCHH
Confidence            999999999999999998754 566666544

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.77  E-value=8.3e-19  Score=129.47  Aligned_cols=103  Identities=18%  Similarity=0.286  Sum_probs=82.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .++ |++|||||++|||++++++|++.|++|++++|+   .+.+.+..+++..    . ..+.++.+|++|.++++.+++
T Consensus        19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~---~~~~~~~~~~~~~----~-~~~~~~~~Dv~d~~~v~~~~~   89 (272)
T 2nwq_A           19 HMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRR---EERLQALAGELSA----K-TRVLPLTLDVRDRAAMSAAVD   89 (272)
T ss_dssp             --C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHTT----T-SCEEEEECCTTCHHHHHHHHH
T ss_pred             CcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHhhc----C-CcEEEEEcCCCCHHHHHHHHH
Confidence            456 899999999999999999999999999999997   3344444444432    2 457889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.++++|+||||||+.....++.+.+.++
T Consensus        90 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~  121 (272)
T 2nwq_A           90 NLPEEFATLRGLINNAGLALGTDPAQSCDLDD  121 (272)
T ss_dssp             TCCGGGSSCCEEEECCCCCCCCCCGGGCCHHH
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCCcccCCHHH
Confidence            99999999999999999865324666665443

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.77  E-value=2.5e-18  Score=126.28  Aligned_cols=100  Identities=25%  Similarity=0.337  Sum_probs=79.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+   .+.+.+..++       ...++.++.+|++|.++++.+++
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~-------~~~~~~~~~~D~~~~~~v~~~~~   72 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDRE---ERLLAEAVAA-------LEAEAIAVVADVSDPKAVEAVFA   72 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHT-------CCSSEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHH-------hcCceEEEEcCCCCHHHHHHHHH
Confidence            3678999999999999999999999999999999996   3333332221       22457788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||||+... .++.+.+.+
T Consensus        73 ~~~~~~g~iD~lvnnAg~~~~-~~~~~~~~~  102 (263)
T 2a4k_A           73 EALEEFGRLHGVAHFAGVAHS-ALSWNLPLE  102 (263)
T ss_dssp             HHHHHHSCCCEEEEGGGGTTT-TC----CHH
T ss_pred             HHHHHcCCCcEEEECCCCCCC-CChhhCCHH
Confidence            999999999999999998754 566665544

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.77  E-value=2.5e-18  Score=125.92  Aligned_cols=95  Identities=21%  Similarity=0.287  Sum_probs=78.5

Q ss_pred             CCCCCCCEEEEecCC--ChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHH
Q 044851           35 SNKLRGMVALVTGGD--SGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCK  112 (149)
Q Consensus        35 ~~~~~~~~~litG~s--~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  112 (149)
                      ...+++|++|||||+  +|||+++|++|++.|++|++++|+....    +.++++..    ....+.++.+|+++.++++
T Consensus         9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~----~~~~~~~~----~~~~~~~~~~Dv~~~~~v~   80 (271)
T 3ek2_A            9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK----DRITEFAA----EFGSELVFPCDVADDAQID   80 (271)
T ss_dssp             CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH----HHHHHHHH----HTTCCCEEECCTTCHHHHH
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhH----HHHHHHHH----HcCCcEEEECCCCCHHHHH
Confidence            345789999999998  9999999999999999999999973222    22333332    1234788999999999999


Q ss_pred             HHHHHHHHhcCCccEEEeCCcCCCC
Q 044851          113 RVVDEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       113 ~~~~~~~~~~g~id~li~~ag~~~~  137 (149)
                      ++++++.++++++|+||||||+...
T Consensus        81 ~~~~~~~~~~g~id~lv~nAg~~~~  105 (271)
T 3ek2_A           81 ALFASLKTHWDSLDGLVHSIGFAPR  105 (271)
T ss_dssp             HHHHHHHHHCSCEEEEEECCCCCCG
T ss_pred             HHHHHHHHHcCCCCEEEECCccCcc
Confidence            9999999999999999999998754

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.77  E-value=2.4e-18  Score=130.11  Aligned_cols=101  Identities=28%  Similarity=0.411  Sum_probs=82.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEe-cCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChH-------
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTY-VKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDE-------  109 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-------  109 (149)
                      +++|++|||||++|||++++++|++.|++|++++ |+   .+.+.+..+++...   .+.++.++.+|+++.+       
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~---~~~~~~~~~~l~~~---~~~~~~~~~~Dl~d~~~~~~~~~  117 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS---AAEANALSATLNAR---RPNSAITVQADLSNVATAPVSGA  117 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC---HHHHHHHHHHHHHH---STTCEEEEECCCSSSCBCC----
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHHHhh---cCCeEEEEEeeCCCchhcccccc
Confidence            6889999999999999999999999999999999 76   34444555555411   3456888999999999       


Q ss_pred             ----------HHHHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          110 ----------NCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       110 ----------~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                                +++.+++++.+.++++|+||||||+... .++.+.+
T Consensus       118 ~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~-~~~~~~~  162 (328)
T 2qhx_A          118 DGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYP-TPLLRND  162 (328)
T ss_dssp             ---CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC-CCSCC--
T ss_pred             ccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCC-CChhhcC
Confidence                      9999999999999999999999998765 5666655

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.77  E-value=1.8e-18  Score=126.86  Aligned_cols=91  Identities=19%  Similarity=0.294  Sum_probs=73.8

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           35 SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        35 ~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      +..+++|++|||||++|||+++|++|++.|++|++++|+...   +.+.+   ..    .  .+.++.+|+++.++++++
T Consensus        22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~---~~----~--~~~~~~~Dv~~~~~v~~~   89 (260)
T 3gem_A           22 HMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHA---SVTEL---RQ----A--GAVALYGDFSCETGIMAF   89 (260)
T ss_dssp             -----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCH---HHHHH---HH----H--TCEEEECCTTSHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHH---HHHHH---Hh----c--CCeEEECCCCCHHHHHHH
Confidence            345789999999999999999999999999999999997432   22222   22    1  267899999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~  137 (149)
                      ++++.+.++++|+||||||+...
T Consensus        90 ~~~~~~~~g~iD~lv~nAg~~~~  112 (260)
T 3gem_A           90 IDLLKTQTSSLRAVVHNASEWLA  112 (260)
T ss_dssp             HHHHHHHCSCCSEEEECCCCCCC
T ss_pred             HHHHHHhcCCCCEEEECCCccCC
Confidence            99999999999999999998654

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.77  E-value=1.5e-18  Score=127.97  Aligned_cols=103  Identities=29%  Similarity=0.433  Sum_probs=76.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+   ...+.+..+++.... ..+.++.++.+|+++.++++.+++
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~   78 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRH---AERLEETRQQILAAG-VSEQNVNSVVADVTTDAGQDEILS   78 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHTT-CCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHhcc-cCCCceeEEecccCCHHHHHHHHH
Confidence            3678999999999999999999999999999999997   334444444442100 023457789999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDI  144 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~  144 (149)
                      ++.++++++|+||||||+... .++.+.
T Consensus        79 ~~~~~~g~id~lv~~Ag~~~~-~~~~~~  105 (278)
T 1spx_A           79 TTLGKFGKLDILVNNAGAAIP-DSQSKT  105 (278)
T ss_dssp             HHHHHHSCCCEEEECCC-----------
T ss_pred             HHHHHcCCCCEEEECCCCCCC-cccccc
Confidence            999999999999999998654 455444

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.77  E-value=6.6e-18  Score=125.10  Aligned_cols=104  Identities=22%  Similarity=0.323  Sum_probs=85.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++|||||++|||++++++|++.|++|++++|+   ...+.+..+++..    .+.++.++.+|++|.+++++++
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~---~~~~~~~~~~l~~----~~~~~~~~~~Dl~d~~~v~~~~  112 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRT---QKSCDSVVDEIKS----FGYESSGYAGDVSKKEEISEVI  112 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESS---HHHHHHHHHHHHT----TTCCEEEEECCTTCHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCC---HHHHHHHHHHHHh----cCCceeEEECCCCCHHHHHHHH
Confidence            35788999999999999999999999999999998876   3344444555543    3556788999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +++.+.++++|+||||||+... .++.+.+.+
T Consensus       113 ~~~~~~~~~id~li~~Ag~~~~-~~~~~~~~~  143 (285)
T 2c07_A          113 NKILTEHKNVDILVNNAGITRD-NLFLRMKND  143 (285)
T ss_dssp             HHHHHHCSCCCEEEECCCCCCC-CCTTTCCHH
T ss_pred             HHHHHhcCCCCEEEECCCCCCC-CchhhCCHH
Confidence            9999999999999999998754 556655543

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.77  E-value=3.8e-18  Score=124.77  Aligned_cols=104  Identities=24%  Similarity=0.306  Sum_probs=82.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|++||||+++|||++++++|++.|++|++++|+   ...+.+..+++..    .+.++.++.+|++|.++++.++++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~   75 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRH---LDTLRVVAQEAQS----LGGQCVPVVCDSSQESEVRSLFEQ   75 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----HSSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHH----cCCceEEEECCCCCHHHHHHHHHH
Confidence            678999999999999999999999999999999987   3344444455543    244678899999999999999999


Q ss_pred             HHHh-cCCccEEEeCCc--CCC----CCCCCCCCCCCC
Q 044851          118 VVNA-YDRIDILVNNAA--EQY----ECGSVEDIDESR  148 (149)
Q Consensus       118 ~~~~-~g~id~li~~ag--~~~----~~~~~~~~s~~~  148 (149)
                      +.+. ++++|+||||||  +..    ...++.+.+.++
T Consensus        76 ~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~  113 (260)
T 2qq5_A           76 VDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASM  113 (260)
T ss_dssp             HHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTH
T ss_pred             HHHhcCCCceEEEECCccccccccccCCCccccCCHHH
Confidence            9876 899999999995  320    124566666553

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.77  E-value=2e-18  Score=126.62  Aligned_cols=95  Identities=23%  Similarity=0.363  Sum_probs=81.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||+++|++|++.|++|++++|+....                ....+.++.+|++++++++++++
T Consensus        25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~~Dv~d~~~v~~~~~   88 (260)
T 3un1_A           25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS----------------ADPDIHTVAGDISKPETADRIVR   88 (260)
T ss_dssp             HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC----------------SSTTEEEEESCTTSHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc----------------ccCceEEEEccCCCHHHHHHHHH
Confidence            46789999999999999999999999999999999974321                22357889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.++++|+||||||+... .++.+.+.++
T Consensus        89 ~~~~~~g~iD~lv~nAg~~~~-~~~~~~~~~~  119 (260)
T 3un1_A           89 EGIERFGRIDSLVNNAGVFLA-KPFVEMTQED  119 (260)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC-CCGGGCCHHH
T ss_pred             HHHHHCCCCCEEEECCCCCCC-CChhhCCHHH
Confidence            999999999999999999765 6777766543

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.77  E-value=2.3e-18  Score=126.73  Aligned_cols=98  Identities=20%  Similarity=0.336  Sum_probs=80.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+|++|||||++|||+++|++|++.|++|++++|+   .+.+.+    .      ....+.++.+|++|.++++.+++
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~----~------~~~~~~~~~~Dv~d~~~v~~~~~   79 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARR---VERLKA----L------NLPNTLCAQVDVTDKYTFDTAIT   79 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESC---HHHHHT----T------CCTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHH----h------hcCCceEEEecCCCHHHHHHHHH
Confidence            4678999999999999999999999999999999996   222211    1      22357788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.+|++|+||||||+... .++.+.+.++
T Consensus        80 ~~~~~~g~iD~lvnnAg~~~~-~~~~~~~~~~  110 (266)
T 3p19_A           80 RAEKIYGPADAIVNNAGMMLL-GQIDTQEANE  110 (266)
T ss_dssp             HHHHHHCSEEEEEECCCCCCC-CCTTTSCHHH
T ss_pred             HHHHHCCCCCEEEECCCcCCC-CCcccCCHHH
Confidence            999999999999999999765 6677666543

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.76  E-value=3.6e-18  Score=124.53  Aligned_cols=100  Identities=31%  Similarity=0.461  Sum_probs=82.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||++++++|++.|++|++++|+   ...+.+..+++       +..+.++.+|+++.++++.+++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~   72 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN---EAAGQQLAAEL-------GERSMFVRHDVSSEADWTLVMA   72 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSC---HHHHHHHHHHH-------CTTEEEECCCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHc-------CCceEEEEccCCCHHHHHHHHH
Confidence            3678999999999999999999999999999999986   33333333332       2357788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||||+... .++.+.+.+
T Consensus        73 ~~~~~~g~id~lv~~Ag~~~~-~~~~~~~~~  102 (253)
T 1hxh_A           73 AVQRRLGTLNVLVNNAGILLP-GDMETGRLE  102 (253)
T ss_dssp             HHHHHHCSCCEEEECCCCCCC-BCTTTCCHH
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CCcccCCHH
Confidence            999999999999999998754 566666544

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.76  E-value=3.6e-18  Score=125.13  Aligned_cols=105  Identities=18%  Similarity=0.275  Sum_probs=81.7

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRGMVALVTGGD--SGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~s--~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .+++|++|||||+  +|||+++|++|++.|++|++++|+....+.    .+++....  ...++.++.+|+++.++++++
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~----~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~   77 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKS----VHELAGTL--DRNDSIILPCDVTNDAEIETC   77 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH----HHHHHHTS--SSCCCEEEECCCSSSHHHHHH
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHH----HHHHHHhc--CCCCceEEeCCCCCHHHHHHH
Confidence            5789999999999  669999999999999999999987332222    22232211  223688999999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCC---CCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYE---CGSVEDIDES  147 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~---~~~~~~~s~~  147 (149)
                      ++++.+.++++|+||||||+...   ..++.+.+.+
T Consensus        78 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~  113 (266)
T 3oig_A           78 FASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRD  113 (266)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHH
T ss_pred             HHHHHHHhCCeeEEEEccccccccccccchhhccHH
Confidence            99999999999999999998752   2445555443

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.76  E-value=5e-18  Score=123.97  Aligned_cols=97  Identities=39%  Similarity=0.546  Sum_probs=79.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+... .   +..+++      .  . .++.+|+++.++++.+++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~---~~~~~~------~--~-~~~~~D~~~~~~~~~~~~   69 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-K---EVAEAI------G--G-AFFQVDLEDERERVRFVE   69 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-H---HHHHHH------T--C-EEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-H---HHHHHh------h--C-CEEEeeCCCHHHHHHHHH
Confidence            3678999999999999999999999999999999997432 2   222222      1  3 678899999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||||+... .++.+.+.+
T Consensus        70 ~~~~~~g~iD~lv~~Ag~~~~-~~~~~~~~~   99 (256)
T 2d1y_A           70 EAAYALGRVDVLVNNAAIAAP-GSALTVRLP   99 (256)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC-BCTTTCCHH
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CChhhCCHH
Confidence            999999999999999998764 566666544

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.76  E-value=4e-18  Score=125.52  Aligned_cols=100  Identities=26%  Similarity=0.443  Sum_probs=80.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||++++++|++.|++|++++|+   ...+.+..+++        ..+.++.+|++|.++++++++
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~--------~~~~~~~~Dv~d~~~v~~~~~   74 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD---ESGGRALEQEL--------PGAVFILCDVTQEDDVKTLVS   74 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHC--------TTEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHh--------cCCeEEEcCCCCHHHHHHHHH
Confidence            3688999999999999999999999999999999986   23332222211        136788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||||+.....++.+.+.+
T Consensus        75 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~  105 (270)
T 1yde_A           75 ETIRRFGRLDCVVNNAGHHPPPQRPEETSAQ  105 (270)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCCGGGCCHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCcccCCHH
Confidence            9999999999999999986543566666544

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.76  E-value=4.8e-18  Score=124.43  Aligned_cols=100  Identities=32%  Similarity=0.476  Sum_probs=81.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+   .+.+.+..+++.       ..+.++.+|+++.++++++++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~   73 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDIL---DEEGKAMAAELA-------DAARYVHLDVTQPAQWKAAVD   73 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHTG-------GGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhh-------cCceEEEecCCCHHHHHHHHH
Confidence            4678999999999999999999999999999999997   333333333322       236788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.++++++|+||||||+... .++.+.+.+
T Consensus        74 ~~~~~~g~iD~lv~~Ag~~~~-~~~~~~~~~  103 (260)
T 1nff_A           74 TAVTAFGGLHVLVNNAGILNI-GTIEDYALT  103 (260)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC-BCTTTSCHH
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CChhhCCHH
Confidence            999999999999999998764 566665544

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.76  E-value=9.9e-18  Score=124.83  Aligned_cols=107  Identities=26%  Similarity=0.456  Sum_probs=85.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccC-CCCCCceEEEecCCChHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKT-PDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      ..+++|+++||||++|||++++++|++.|++|++++|+   ...+....+++..... ..+.++.++.+|+++.++++.+
T Consensus        14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~   90 (303)
T 1yxm_A           14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRK---LERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNL   90 (303)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHH
Confidence            35789999999999999999999999999999999997   3344444555543111 0245678899999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      ++++.+.++++|+||||||+... .++.+.+.
T Consensus        91 ~~~~~~~~g~id~li~~Ag~~~~-~~~~~~~~  121 (303)
T 1yxm_A           91 VKSTLDTFGKINFLVNNGGGQFL-SPAEHISS  121 (303)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCC-CCGGGCCH
T ss_pred             HHHHHHHcCCCCEEEECCCCCCC-CchhhCCH
Confidence            99999999999999999997654 45555543

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.76  E-value=3.8e-18  Score=124.53  Aligned_cols=99  Identities=26%  Similarity=0.340  Sum_probs=81.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|++||||+++|||++++++|++.|++|++++|+   .+.+.+..+++       +..+.++.+|+++.++++.++++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~   72 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVL---DEEGAATAREL-------GDAARYQHLDVTIEEDWQRVVAY   72 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTT-------GGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHh-------CCceeEEEecCCCHHHHHHHHHH
Confidence            678999999999999999999999999999999996   33333332221       23467889999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +.+.++++|+||||||+... .++.+.+.+
T Consensus        73 ~~~~~g~iD~lv~nAg~~~~-~~~~~~~~~  101 (254)
T 1hdc_A           73 AREEFGSVDGLVNNAGISTG-MFLETESVE  101 (254)
T ss_dssp             HHHHHSCCCEEEECCCCCCC-SCGGGSCHH
T ss_pred             HHHHcCCCCEEEECCCCCCC-CChhhCCHH
Confidence            99999999999999998754 566665544

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.76  E-value=6.9e-18  Score=123.48  Aligned_cols=103  Identities=23%  Similarity=0.357  Sum_probs=81.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+   ...+.+..+++..    .+.++.++.+|+++.++++.+++
T Consensus        11 ~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   83 (266)
T 1xq1_A           11 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN---EYELNECLSKWQK----KGFQVTGSVCDASLRPEREKLMQ   83 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHh----cCCeeEEEECCCCCHHHHHHHHH
Confidence            4788999999999999999999999999999999986   3444455555554    34567889999999999999999


Q ss_pred             HHHHhc-CCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAY-DRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~-g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.+ +++|+||||||+... .++.+.+.+
T Consensus        84 ~~~~~~~~~id~li~~Ag~~~~-~~~~~~~~~  114 (266)
T 1xq1_A           84 TVSSMFGGKLDILINNLGAIRS-KPTLDYTAE  114 (266)
T ss_dssp             HHHHHHTTCCSEEEEECCC-------CCCCHH
T ss_pred             HHHHHhCCCCcEEEECCCCCCC-CChhhCCHH
Confidence            999998 899999999998654 455555543

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.76  E-value=6.1e-18  Score=123.96  Aligned_cols=103  Identities=26%  Similarity=0.417  Sum_probs=84.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||.+++++|++.|++|++++|+.  ...+.+..+++..    .+.++.++.+|++|.+++.++++
T Consensus        18 ~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~--~~~~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~~~   91 (274)
T 1ja9_A           18 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSS--SKAAEEVVAELKK----LGAQGVAIQADISKPSEVVALFD   91 (274)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHH----TTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCc--hHHHHHHHHHHHh----cCCcEEEEEecCCCHHHHHHHHH
Confidence            46889999999999999999999999999999999831  3334444455544    35567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      ++.++++++|+||||||+... .++.+.+.
T Consensus        92 ~~~~~~~~~d~vi~~Ag~~~~-~~~~~~~~  120 (274)
T 1ja9_A           92 KAVSHFGGLDFVMSNSGMEVW-CDELEVTQ  120 (274)
T ss_dssp             HHHHHHSCEEEEECCCCCCCC-CCGGGCCH
T ss_pred             HHHHHcCCCCEEEECCCCCCC-cccccCCH
Confidence            999999999999999998754 45555543

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.76  E-value=7.5e-18  Score=124.29  Aligned_cols=105  Identities=24%  Similarity=0.268  Sum_probs=83.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+   ...+.+..+++....  ....+.++.+|+++.+++..+++
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~  103 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCART---VGNIEELAAECKSAG--YPGTLIPYRCDLSNEEDILSMFS  103 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHTT--CSSEEEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECC---hHHHHHHHHHHHhcC--CCceEEEEEecCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999997   334444444454310  12346788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||||+... .++.+.+.+
T Consensus       104 ~~~~~~g~iD~vi~~Ag~~~~-~~~~~~~~~  133 (279)
T 1xg5_A          104 AIRSQHSGVDICINNAGLARP-DTLLSGSTS  133 (279)
T ss_dssp             HHHHHHCCCSEEEECCCCCCC-CCTTTCCHH
T ss_pred             HHHHhCCCCCEEEECCCCCCC-CCcccCCHH
Confidence            999999999999999998764 556555443

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.76  E-value=5.2e-18  Score=123.70  Aligned_cols=103  Identities=23%  Similarity=0.497  Sum_probs=83.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||++++++|++.|++|++++|+.  ...+.+..+++..    .+..+.++.+|+++.+++.++++
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~--~~~~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~~~   77 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSK--EDEANSVLEEIKK----VGGEAIAVKGDVTVESDVINLVQ   77 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHH----TTCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCC--hHHHHHHHHHHHh----cCCceEEEECCCCCHHHHHHHHH
Confidence            36789999999999999999999999999999999831  3344444455544    34567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      ++.+.++++|+||||||+... .++.+.+.
T Consensus        78 ~~~~~~g~id~li~~Ag~~~~-~~~~~~~~  106 (261)
T 1gee_A           78 SAIKEFGKLDVMINNAGLENP-VSSHEMSL  106 (261)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC-CCGGGCCH
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CCcccCCH
Confidence            999999999999999998754 45555544

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.76  E-value=6.8e-18  Score=122.34  Aligned_cols=102  Identities=27%  Similarity=0.398  Sum_probs=82.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||++++++|++.|++|++++|+   ...+.+..+++..     ...+.++.+|+++.+++.++++
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~   74 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRH---SDVGEKAAKSVGT-----PDQIQFFQHDSSDEDGWTKLFD   74 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCC-----TTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhhc-----cCceEEEECCCCCHHHHHHHHH
Confidence            4678999999999999999999999999999999986   3333333333321     2467889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      .+.+.++++|+||||||+... .++.+.+.+
T Consensus        75 ~~~~~~~~id~li~~Ag~~~~-~~~~~~~~~  104 (251)
T 1zk4_A           75 ATEKAFGPVSTLVNNAGIAVN-KSVEETTTA  104 (251)
T ss_dssp             HHHHHHSSCCEEEECCCCCCC-CCTTTCCHH
T ss_pred             HHHHHhCCCCEEEECCCCCCC-CChhhCCHH
Confidence            999999999999999998754 556555543

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.76  E-value=9.7e-18  Score=121.26  Aligned_cols=103  Identities=26%  Similarity=0.433  Sum_probs=73.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEE-ecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFT-YVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +++|++||||+++|||++++++|++.|++|+++ .|+..   .+.+..+++..    .+.++.++.+|++|.++++.+++
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~---~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   75 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPAST---SLDATAEEFKA----AGINVVVAKGDVKNPEDVENMVK   75 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCS---HHHHHHHHHHH----TTCCEEEEESCTTSHHHHHHHHH
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHH---HHHHHHHHHHh----cCCcEEEEECCCCCHHHHHHHHH
Confidence            578999999999999999999999999999988 45432   23334444443    35567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.++++|+||||||+... .++.+.+.++
T Consensus        76 ~~~~~~~~~d~vi~~Ag~~~~-~~~~~~~~~~  106 (247)
T 2hq1_A           76 TAMDAFGRIDILVNNAGITRD-TLMLKMSEKD  106 (247)
T ss_dssp             HHHHHHSCCCEEEECC----------------
T ss_pred             HHHHhcCCCCEEEECCCCCCC-CccccCCHHH
Confidence            999999999999999998754 4555555554

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.76  E-value=5e-18  Score=125.07  Aligned_cols=95  Identities=28%  Similarity=0.425  Sum_probs=79.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++||||+++|||.+++++|++.|++|++++|+......+.+.   +..    .+.++.++.+|+++.++++.++
T Consensus        30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~---~~~----~~~~~~~~~~Dl~~~~~~~~~~  102 (279)
T 3ctm_A           30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHL---QKT----YGVHSKAYKCNISDPKSVEETI  102 (279)
T ss_dssp             GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHH---HHH----HCSCEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---HHh----cCCcceEEEeecCCHHHHHHHH
Confidence            357899999999999999999999999999999999986544433332   222    2446788999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~  137 (149)
                      +++.+.++++|+||||||+...
T Consensus       103 ~~~~~~~g~id~li~~Ag~~~~  124 (279)
T 3ctm_A          103 SQQEKDFGTIDVFVANAGVTWT  124 (279)
T ss_dssp             HHHHHHHSCCSEEEECGGGSTT
T ss_pred             HHHHHHhCCCCEEEECCccccc
Confidence            9999999999999999998654

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.75  E-value=3e-18  Score=125.33  Aligned_cols=104  Identities=25%  Similarity=0.377  Sum_probs=80.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +.+|++|||||++|||++++++|++.|++|++++++.  ........+.+..    .+.++.++.+|+++.+++.+++++
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~v~~~~~~   78 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSD--TTAMETMKETYKD----VEERLQFVQADVTKKEDLHKIVEE   78 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHTGG----GGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCC--hHHHHHHHHHHHh----cCCceEEEEecCCCHHHHHHHHHH
Confidence            4568999999999999999999999999999998863  2222222222222    345688999999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCC-CCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQY-ECGSVEDIDES  147 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~-~~~~~~~~s~~  147 (149)
                      +.+.++++|+||||||+.. ...++.+.+.+
T Consensus        79 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~  109 (264)
T 3i4f_A           79 AMSHFGKIDFLINNAGPYVFERKKLVDYEED  109 (264)
T ss_dssp             HHHHHSCCCEEECCCCCCCCSCCCGGGCCHH
T ss_pred             HHHHhCCCCEEEECCcccccCCCccccCCHH
Confidence            9999999999999999422 22456666544

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.75  E-value=9.7e-18  Score=121.71  Aligned_cols=94  Identities=26%  Similarity=0.458  Sum_probs=80.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+   ...+....+++..    .+.++.++.+|+++.++++.+++
T Consensus         8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   80 (255)
T 1fmc_A            8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN---ADAANHVVDEIQQ----LGGQAFACRCDITSEQELSALAD   80 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESC---HHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCC---HHHHHHHHHHHHH----hCCceEEEEcCCCCHHHHHHHHH
Confidence            4678999999999999999999999999999999997   3344444555544    34567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~  137 (149)
                      ++.+.++++|+||||||+...
T Consensus        81 ~~~~~~~~~d~vi~~Ag~~~~  101 (255)
T 1fmc_A           81 FAISKLGKVDILVNNAGGGGP  101 (255)
T ss_dssp             HHHHHHSSCCEEEECCCCCCC
T ss_pred             HHHHhcCCCCEEEECCCCCCC
Confidence            999999999999999998654

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.75  E-value=6.7e-18  Score=122.62  Aligned_cols=98  Identities=24%  Similarity=0.312  Sum_probs=80.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|++||||+++|||++++++|++.|++|++++|+   .+.+.+..    ..   .+  +.++.+|++|.+++++++++
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~----~~---~~--~~~~~~D~~~~~~~~~~~~~   70 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIE---EGPLREAA----EA---VG--AHPVVMDVADPASVERGFAE   70 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHH----HT---TT--CEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHH----HH---cC--CEEEEecCCCHHHHHHHHHH
Confidence            678999999999999999999999999999999986   23332222    11   12  67889999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +.++++++|+||||||+... .++.+.+.++
T Consensus        71 ~~~~~g~id~lvn~Ag~~~~-~~~~~~~~~~  100 (245)
T 1uls_A           71 ALAHLGRLDGVVHYAGITRD-NFHWKMPLED  100 (245)
T ss_dssp             HHHHHSSCCEEEECCCCCCC-CCGGGCCHHH
T ss_pred             HHHHcCCCCEEEECCCCCCC-CChhhCCHHH
Confidence            99999999999999998754 5666665443

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.75  E-value=1.7e-17  Score=121.28  Aligned_cols=95  Identities=25%  Similarity=0.411  Sum_probs=78.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++||||+++|||++++++|++.|++|++++|+....                  ..+.++.+|++|.+++++++
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------------------~~~~~~~~Dl~d~~~v~~~~   78 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP------------------EGFLAVKCDITDTEQVEQAY   78 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC------------------TTSEEEECCTTSHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh------------------ccceEEEecCCCHHHHHHHH
Confidence            347889999999999999999999999999999999974321                  12678899999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      +++.+.++++|+||||||+... .++.+.+.++|
T Consensus        79 ~~~~~~~g~iD~lv~nAg~~~~-~~~~~~~~~~~  111 (253)
T 2nm0_A           79 KEIEETHGPVEVLIANAGVTKD-QLLMRMSEEDF  111 (253)
T ss_dssp             HHHHHHTCSCSEEEEECSCCTT-TC---CCTTTT
T ss_pred             HHHHHHcCCCCEEEECCCCCCC-CChhhCCHHHH
Confidence            9999999999999999998765 66777777664

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.75  E-value=6.2e-18  Score=123.40  Aligned_cols=106  Identities=32%  Similarity=0.436  Sum_probs=80.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhcc---CCCCCCceEEEecCCChHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAK---TPDAKDPMAISADLGFDENCKR  113 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dv~~~~~v~~  113 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+   ...+.+..+++....   .....++.++.+|+++.+++..
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   80 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLD---RAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARC   80 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHTC------------CCEEEECCTTSHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC---hHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHH
Confidence            4678999999999999999999999999999999996   333333333222100   0001467889999999999999


Q ss_pred             HHHHHHHhcCCc-cEEEeCCcCCCCCCCCCCCCC
Q 044851          114 VVDEVVNAYDRI-DILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       114 ~~~~~~~~~g~i-d~li~~ag~~~~~~~~~~~s~  146 (149)
                      +++.+.+.++++ |+||||||+... .++.+.+.
T Consensus        81 ~~~~~~~~~g~i~d~vi~~Ag~~~~-~~~~~~~~  113 (264)
T 2pd6_A           81 LLEQVQACFSRPPSVVVSCAGITQD-EFLLHMSE  113 (264)
T ss_dssp             HHHHHHHHHSSCCSEEEECCCCCCC-BCGGGCCH
T ss_pred             HHHHHHHHhCCCCeEEEECCCcCCC-cchhhCCH
Confidence            999999999999 999999998754 45555544

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.75  E-value=4.3e-18  Score=125.62  Aligned_cols=99  Identities=32%  Similarity=0.399  Sum_probs=81.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +.+|++|||||++|||.+++++|++.|++|++++|+....   .+..++       .+..+.++.+|+++.+++..++++
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~~~-------~~~~~~~~~~Dv~~~~~~~~~~~~   72 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEAL---DDLVAA-------YPDRAEAISLDVTDGERIDVVAAD   72 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGG---HHHHHH-------CTTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHh-------ccCCceEEEeeCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999999974332   222221       345678899999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +.+.++++|+||||||+... .++.+.+.+
T Consensus        73 ~~~~~g~id~lv~~Ag~~~~-~~~~~~~~~  101 (281)
T 3m1a_A           73 VLARYGRVDVLVNNAGRTQV-GAFEETTER  101 (281)
T ss_dssp             HHHHHSCCSEEEECCCCEEE-CCTTTCCHH
T ss_pred             HHHhCCCCCEEEECCCcCCC-CChhhCCHH
Confidence            99999999999999999765 566666554

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.75  E-value=7.9e-18  Score=124.65  Aligned_cols=103  Identities=26%  Similarity=0.443  Sum_probs=81.1

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRGMVALVTGGD--SGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~s--~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .+++|++||||++  +|||++++++|++.|++|++++|+..    ..+..+++...   .+ .+.++.+|+++.++++.+
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~l~~~---~~-~~~~~~~Dl~~~~~v~~~   89 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK----LEKRVREIAKG---FG-SDLVVKCDVSLDEDIKNL   89 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG----GHHHHHHHHHH---TT-CCCEEECCTTCHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHHHHh---cC-CeEEEEcCCCCHHHHHHH
Confidence            3789999999999  99999999999999999999999742    22233334321   12 367889999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCC---CCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYE---CGSVEDIDES  147 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~---~~~~~~~s~~  147 (149)
                      ++++.+.++++|+||||||+...   ..++.+.+.+
T Consensus        90 ~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~  125 (285)
T 2p91_A           90 KKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSRE  125 (285)
T ss_dssp             HHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHH
T ss_pred             HHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHH
Confidence            99999999999999999998643   1345555443

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.75  E-value=9e-18  Score=121.97  Aligned_cols=102  Identities=37%  Similarity=0.592  Sum_probs=82.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC-CCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK-PQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +++|++|||||++|||++++++|++.|++|++++|+ ....   .+..+++..    .+.++.++.+|+++.++++++++
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   77 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANI---DETIASMRA----DGGDAAFFAADLATSEACQQLVD   77 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTH---HHHHHHHHH----TTCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhH---HHHHHHHHh----cCCceEEEECCCCCHHHHHHHHH
Confidence            678999999999999999999999999999999997 4333   333344443    34567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      ++.+.++++|+||||||+.....++.+.+.
T Consensus        78 ~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~  107 (258)
T 3afn_B           78 EFVAKFGGIDVLINNAGGLVGRKPLPEIDD  107 (258)
T ss_dssp             HHHHHHSSCSEEEECCCCCCCCCCGGGCCH
T ss_pred             HHHHHcCCCCEEEECCCCcCCcCccccCCH
Confidence            999999999999999998333255555543

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.75  E-value=1.4e-17  Score=120.43  Aligned_cols=103  Identities=33%  Similarity=0.420  Sum_probs=82.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||+++|||++++++|++.|++|++++|+.   ..+.+..+++...   .+..+.++.+|++|.++++.+++
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~   77 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSG---ERAKAVAEEIANK---YGVKAHGVEMNLLSEESINKAFE   77 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSH---HHHHHHHHHHHHH---HCCCEEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCh---HHHHHHHHHHHhh---cCCceEEEEccCCCHHHHHHHHH
Confidence            47889999999999999999999999999999999963   3333333333221   13457889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      ++.+.++++|+||||||+... .++.+.+.
T Consensus        78 ~~~~~~~~~d~vi~~Ag~~~~-~~~~~~~~  106 (248)
T 2pnf_A           78 EIYNLVDGIDILVNNAGITRD-KLFLRMSL  106 (248)
T ss_dssp             HHHHHSSCCSEEEECCCCCCC-CCGGGCCH
T ss_pred             HHHHhcCCCCEEEECCCCCCC-CccccCCH
Confidence            999999999999999998754 45555543

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.74  E-value=1.2e-17  Score=120.77  Aligned_cols=100  Identities=28%  Similarity=0.409  Sum_probs=82.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-------cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGA-------TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCK  112 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~-------~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  112 (149)
                      +|++|||||++|||++++++|++.|+       +|++++|+   ...+....+++..    .+.++.++.+|+++.+++.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~---~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~   74 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRT---AADLEKISLECRA----EGALTDTITADISDMADVR   74 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESC---HHHHHHHHHHHHT----TTCEEEEEECCTTSHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCC---HHHHHHHHHHHHc----cCCeeeEEEecCCCHHHHH
Confidence            67899999999999999999999999       89999986   3344444444443    3456788999999999999


Q ss_pred             HHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          113 RVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       113 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      .+++++.+.++++|+||||||+... .++.+.+.+
T Consensus        75 ~~~~~~~~~~g~id~li~~Ag~~~~-~~~~~~~~~  108 (244)
T 2bd0_A           75 RLTTHIVERYGHIDCLVNNAGVGRF-GALSDLTEE  108 (244)
T ss_dssp             HHHHHHHHHTSCCSEEEECCCCCCC-CCGGGCCHH
T ss_pred             HHHHHHHHhCCCCCEEEEcCCcCCc-CccccCCHH
Confidence            9999999999999999999998754 556555543

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.74  E-value=9.9e-18  Score=122.29  Aligned_cols=104  Identities=20%  Similarity=0.293  Sum_probs=83.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+.....+   ..+++...   .+.++.++.+|++|.++++.+++
T Consensus        11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~---~~~~l~~~---~~~~~~~~~~Dl~~~~~~~~~~~   84 (265)
T 1h5q_A           11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVE---VTEKVGKE---FGVKTKAYQCDVSNTDIVTKTIQ   84 (265)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHH---HHHHHHHH---HTCCEEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHH---HHHHHHHh---cCCeeEEEEeeCCCHHHHHHHHH
Confidence            4678999999999999999999999999999999997443332   23333221   23467889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||||+... .++.+.+.+
T Consensus        85 ~~~~~~~~id~li~~Ag~~~~-~~~~~~~~~  114 (265)
T 1h5q_A           85 QIDADLGPISGLIANAGVSVV-KPATELTHE  114 (265)
T ss_dssp             HHHHHSCSEEEEEECCCCCCC-SCGGGCCHH
T ss_pred             HHHHhcCCCCEEEECCCcCCC-CchhhCCHH
Confidence            999999999999999998765 556555443

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.74  E-value=9.3e-18  Score=123.22  Aligned_cols=92  Identities=30%  Similarity=0.466  Sum_probs=79.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||++++++|++.|++|++++|+...                  +.++.++.+|+++.++++.+++
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------------------~~~~~~~~~Dl~~~~~v~~~~~   66 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------------------EAKYDHIECDVTNPDQVKASID   66 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------------------SCSSEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------------------CCceEEEEecCCCHHHHHHHHH
Confidence            3678999999999999999999999999999999987432                  2346788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||||+... .++.+.+.+
T Consensus        67 ~~~~~~g~iD~lv~~Ag~~~~-~~~~~~~~~   96 (264)
T 2dtx_A           67 HIFKEYGSISVLVNNAGIESY-GKIESMSMG   96 (264)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC-BCTTTSCHH
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CCcccCCHH
Confidence            999999999999999998764 566666544

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.74  E-value=1.1e-17  Score=122.14  Aligned_cols=99  Identities=26%  Similarity=0.295  Sum_probs=80.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC--CcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEG--ATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +|++|||||++|||+++|++|++.|  +.|++++|+   ...+.+..+++       +.++.++.+|++|.+++++++++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~---~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~   71 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARS---EAPLKKLKEKY-------GDRFFYVVGDITEDSVLKQLVNA   71 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESC---HHHHHHHHHHH-------GGGEEEEESCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCC---HHHHHHHHHHh-------CCceEEEECCCCCHHHHHHHHHH
Confidence            6899999999999999999999986  568888886   33333333332       23578899999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +.+.++++|+||||||+.....++.+.+.++
T Consensus        72 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~  102 (254)
T 3kzv_A           72 AVKGHGKIDSLVANAGVLEPVQNVNEIDVNA  102 (254)
T ss_dssp             HHHHHSCCCEEEEECCCCCCCTTTTSCCHHH
T ss_pred             HHHhcCCccEEEECCcccCCCCCcccCCHHH
Confidence            9999999999999999965546777776554

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.74  E-value=1.3e-17  Score=120.84  Aligned_cols=92  Identities=28%  Similarity=0.363  Sum_probs=76.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +|+++||||++|||++++++|++.|++|++++|+   ...+.+..+++...   .+.++.++.+|+++.++++.+++++.
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLS---AETLEETARTHWHA---YADKVLRVRADVADEGDVNAAIAATM   75 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHSTT---TGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            6789999999999999999999999999999986   33344444444110   23457889999999999999999999


Q ss_pred             HhcCCccEEEeCCcCCCC
Q 044851          120 NAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~  137 (149)
                      +.++++|+||||||+...
T Consensus        76 ~~~~~id~li~~Ag~~~~   93 (250)
T 2cfc_A           76 EQFGAIDVLVNNAGITGN   93 (250)
T ss_dssp             HHHSCCCEEEECCCCCCC
T ss_pred             HHhCCCCEEEECCCCCCC
Confidence            999999999999998654

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.74  E-value=2.4e-17  Score=121.13  Aligned_cols=102  Identities=23%  Similarity=0.380  Sum_probs=81.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+   .....+..+++.     ....+.++.+|++|.++++.+++
T Consensus        13 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~   84 (278)
T 2bgk_A           13 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIA---DDHGQKVCNNIG-----SPDVISFVHCDVTKDEDVRNLVD   84 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHC-----CTTTEEEEECCTTCHHHHHHHHH
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC---hhHHHHHHHHhC-----CCCceEEEECCCCCHHHHHHHHH
Confidence            4788999999999999999999999999999999886   333333333332     12367889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCC-CCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE-CGSVEDIDE  146 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~-~~~~~~~s~  146 (149)
                      ++.+.++++|+||||||+... ..++.+.+.
T Consensus        85 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~  115 (278)
T 2bgk_A           85 TTIAKHGKLDIMFGNVGVLSTTPYSILEAGN  115 (278)
T ss_dssp             HHHHHHSCCCEEEECCCCCCSSCSSTTTCCH
T ss_pred             HHHHHcCCCCEEEECCcccCCCCCChhhCCH
Confidence            999999999999999998653 134555443

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.74  E-value=1.2e-17  Score=123.10  Aligned_cols=102  Identities=23%  Similarity=0.362  Sum_probs=80.9

Q ss_pred             CCCCEEEEecCC--ChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           38 LRGMVALVTGGD--SGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        38 ~~~~~~litG~s--~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +++|++||||++  +|||++++++|++.|++|++++|+.. .   .+..+++...   .+ .+.++.+|+++.++++.++
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~---~~~~~~l~~~---~~-~~~~~~~D~~~~~~v~~~~   75 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-L---EKRVRPIAQE---LN-SPYVYELDVSKEEHFKSLY   75 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-T---HHHHHHHHHH---TT-CCCEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-H---HHHHHHHHHh---cC-CcEEEEcCCCCHHHHHHHH
Confidence            678999999999  99999999999999999999999853 2   2223333321   12 3678999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCC---CCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYE---CGSVEDIDES  147 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~---~~~~~~~s~~  147 (149)
                      +++.+.++++|+||||||+...   ..++.+.+.+
T Consensus        76 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~  110 (275)
T 2pd4_A           76 NSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKS  110 (275)
T ss_dssp             HHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHH
T ss_pred             HHHHHHcCCCCEEEECCccCccccCCCCcccCCHH
Confidence            9999999999999999998653   1355555543

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.73  E-value=5.6e-18  Score=124.62  Aligned_cols=95  Identities=28%  Similarity=0.379  Sum_probs=78.3

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           35 SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        35 ~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      +..+++|++|||||++|||+++|++|++.|++|++++|+....                  .....+.+|+++.+++..+
T Consensus        23 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~------------------~~~~~~~~Dv~~~~~~~~~   84 (266)
T 3uxy_A           23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI------------------AADLHLPGDLREAAYADGL   84 (266)
T ss_dssp             ---CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTS------------------CCSEECCCCTTSHHHHHHH
T ss_pred             hhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------------------HhhhccCcCCCCHHHHHHH
Confidence            3457899999999999999999999999999999999874321                  1124457999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++++.+.++++|+||||||+... .++.+.+.++
T Consensus        85 ~~~~~~~~g~iD~lvnnAg~~~~-~~~~~~~~~~  117 (266)
T 3uxy_A           85 PGAVAAGLGRLDIVVNNAGVISR-GRITETTDAD  117 (266)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCC-BCGGGCCHHH
T ss_pred             HHHHHHhcCCCCEEEECCCCCCC-CChhhCCHHH
Confidence            99999999999999999999775 5676666544

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.73  E-value=1.3e-17  Score=121.74  Aligned_cols=106  Identities=23%  Similarity=0.319  Sum_probs=82.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHH---cCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQ---EGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKR  113 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~---~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  113 (149)
                      .+++|++||||+++|||++++++|++   .|++|++++|+   .+.+.+..+++....  .+.++.++.+|+++.++++.
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~---~~~~~~~~~~l~~~~--~~~~~~~~~~Dv~~~~~v~~   77 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARS---ESMLRQLKEELGAQQ--PDLKVVLAAADLGTEAGVQR   77 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESC---HHHHHHHHHHHHHHC--TTSEEEEEECCTTSHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCC---HHHHHHHHHHHHhhC--CCCeEEEEecCCCCHHHHHH
Confidence            47889999999999999999999999   89999999997   344444445554310  13457889999999999999


Q ss_pred             HHHHHHH--hcCCcc--EEEeCCcCCCC-CCCCCC-CCCC
Q 044851          114 VVDEVVN--AYDRID--ILVNNAAEQYE-CGSVED-IDES  147 (149)
Q Consensus       114 ~~~~~~~--~~g~id--~li~~ag~~~~-~~~~~~-~s~~  147 (149)
                      +++++.+  .++++|  +||||||+... ..++.+ .+.+
T Consensus        78 ~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~  117 (259)
T 1oaa_A           78 LLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLA  117 (259)
T ss_dssp             HHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHH
T ss_pred             HHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHH
Confidence            9999988  678899  99999998643 134555 4433

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.73  E-value=1.8e-17  Score=121.69  Aligned_cols=102  Identities=31%  Similarity=0.519  Sum_probs=80.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||+++|++|++.|++|++++|+   .+.+.+..+++....  ....+.++.+|+++.++++.++ 
T Consensus         7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~-   80 (267)
T 3t4x_A            7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRR---EENVNETIKEIRAQY--PDAILQPVVADLGTEQGCQDVI-   80 (267)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHHHHHC--TTCEEEEEECCTTSHHHHHHHH-
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHhhC--CCceEEEEecCCCCHHHHHHHH-
Confidence            5789999999999999999999999999999999997   444555555554411  1345677889999998877665 


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                         ++++++|+||||||+... .++.+.+.++
T Consensus        81 ---~~~g~id~lv~nAg~~~~-~~~~~~~~~~  108 (267)
T 3t4x_A           81 ---EKYPKVDILINNLGIFEP-VEYFDIPDED  108 (267)
T ss_dssp             ---HHCCCCSEEEECCCCCCC-CCGGGSCHHH
T ss_pred             ---HhcCCCCEEEECCCCCCC-CccccCCHHH
Confidence               457899999999999765 5677766554

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.73  E-value=2.8e-17  Score=120.00  Aligned_cols=91  Identities=22%  Similarity=0.385  Sum_probs=77.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||++++++|++.|++|++++|+.....+   ..+++       +..+.++.+|+++.++++++++
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~---~~~~~-------~~~~~~~~~D~~~~~~v~~~~~   78 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEA---QAKKL-------GNNCVFAPADVTSEKDVQTALA   78 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHH---HHHHH-------CTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHH---HHHHh-------CCceEEEEcCCCCHHHHHHHHH
Confidence            4688999999999999999999999999999999998544332   22222       2357889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~  137 (149)
                      ++.+.++++|+||||||+...
T Consensus        79 ~~~~~~g~id~li~~Ag~~~~   99 (265)
T 2o23_A           79 LAKGKFGRVDVAVNCAGIAVA   99 (265)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC
T ss_pred             HHHHHCCCCCEEEECCccCCC
Confidence            999999999999999998754

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.73  E-value=1.1e-17  Score=122.49  Aligned_cols=103  Identities=28%  Similarity=0.341  Sum_probs=81.0

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRGMVALVTGGD--SGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~s--~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .+++|++||||++  +|||++++++|++.|++|++++|+..    ..+..+++...   .+ .+.++.+|+++.++++.+
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~l~~~---~~-~~~~~~~D~~~~~~v~~~   76 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER----LRPEAEKLAEA---LG-GALLFRADVTQDEELDAL   76 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG----GHHHHHHHHHH---TT-CCEEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH----HHHHHHHHHHh---cC-CcEEEECCCCCHHHHHHH
Confidence            4678999999998  99999999999999999999999742    22233333321   12 367899999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCC---CCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYE---CGSVEDIDES  147 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~---~~~~~~~s~~  147 (149)
                      ++++.+.++++|+||||||+...   ..++.+.+.+
T Consensus        77 ~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~  112 (261)
T 2wyu_A           77 FAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQ  112 (261)
T ss_dssp             HHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHH
T ss_pred             HHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHH
Confidence            99999999999999999998642   1355555543

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.73  E-value=1.9e-17  Score=119.51  Aligned_cols=99  Identities=21%  Similarity=0.387  Sum_probs=79.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEE-ecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFT-YVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      +|+++||||++|||++++++|++.|++|+++ .|+   .....+..+++..    .+.++.++.+|+++.++++.+++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~---~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~   73 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARS---AKAAEEVSKQIEA----YGGQAITFGGDVSKEADVEAMMKTA   73 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC---HHHHHHHHHHHHH----HTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHHHh----cCCcEEEEeCCCCCHHHHHHHHHHH
Confidence            5789999999999999999999999999885 665   3333344444433    2446778899999999999999999


Q ss_pred             HHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          119 VNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      .+.++++|+||||||+... .++.+.+.
T Consensus        74 ~~~~g~id~li~~Ag~~~~-~~~~~~~~  100 (244)
T 1edo_A           74 IDAWGTIDVVVNNAGITRD-TLLIRMKK  100 (244)
T ss_dssp             HHHSSCCSEEEECCCCCCC-CCGGGCCH
T ss_pred             HHHcCCCCEEEECCCCCCC-cCcccCCH
Confidence            9999999999999998764 45555543

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.73  E-value=1.4e-17  Score=121.07  Aligned_cols=104  Identities=33%  Similarity=0.487  Sum_probs=83.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||++++++|++.|++|++++++.  ...+.+..+++..    .+..+.++.+|+++.++++.+++
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   77 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNR--KEEAEETVYEIQS----NGGSAFSIGANLESLHGVEALYS   77 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC--SHHHHHHHHHHHH----TTCEEEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCc--hHHHHHHHHHHHh----cCCceEEEecCcCCHHHHHHHHH
Confidence            36889999999999999999999999999998865432  3445555566655    45667889999999999999999


Q ss_pred             HHHHhcC------CccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYD------RIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g------~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++      ++|+||||||+... .++.+.+.+
T Consensus        78 ~~~~~~~~~~~~~~id~lv~nAg~~~~-~~~~~~~~~  113 (255)
T 3icc_A           78 SLDNELQNRTGSTKFDILINNAGIGPG-AFIEETTEQ  113 (255)
T ss_dssp             HHHHHHHHHHSSSCEEEEEECCCCCCC-BCGGGCCHH
T ss_pred             HHHHHhcccccCCcccEEEECCCCCCC-CChhhCCHH
Confidence            9887764      49999999998654 566665544

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.73  E-value=1.7e-17  Score=121.39  Aligned_cols=103  Identities=16%  Similarity=0.221  Sum_probs=81.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcC---CcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEG---ATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCK  112 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g---~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  112 (149)
                      ..+.+|++|||||++|||++++++|++.|   ++|++++|+....+.+    .++..    .+.++.++.+|+++.++++
T Consensus        17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~----~~l~~----~~~~~~~~~~Dl~~~~~v~   88 (267)
T 1sny_A           17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL----EDLAK----NHSNIHILEIDLRNFDAYD   88 (267)
T ss_dssp             ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH----HHHHH----HCTTEEEEECCTTCGGGHH
T ss_pred             cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH----HHhhc----cCCceEEEEecCCChHHHH
Confidence            35788999999999999999999999999   8999999986554433    22322    2346788999999999999


Q ss_pred             HHHHHHHHhcC--CccEEEeCCcCCCCCCCCCCCCC
Q 044851          113 RVVDEVVNAYD--RIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       113 ~~~~~~~~~~g--~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      .+++++.+.++  ++|+||||||+.....++.+.+.
T Consensus        89 ~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~  124 (267)
T 1sny_A           89 KLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRS  124 (267)
T ss_dssp             HHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCH
T ss_pred             HHHHHHHHhcCCCCccEEEECCCcCCCccccccCCH
Confidence            99999999988  89999999998762245555543

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.73  E-value=3e-17  Score=119.47  Aligned_cols=94  Identities=23%  Similarity=0.290  Sum_probs=79.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||++++++|++.|++|++++|+...            .    .. .+.++.+|++|.+++.++++
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~------------~----~~-~~~~~~~D~~d~~~~~~~~~   66 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ------------E----QY-PFATEVMDVADAAQVAQVCQ   66 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS------------S----CC-SSEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh------------h----cC-CceEEEcCCCCHHHHHHHHH
Confidence            3678999999999999999999999999999999997431            0    11 26788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.++++++|+||||||+... .++.+.+.++
T Consensus        67 ~~~~~~g~id~lv~~Ag~~~~-~~~~~~~~~~   97 (250)
T 2fwm_X           67 RLLAETERLDALVNAAGILRM-GATDQLSKED   97 (250)
T ss_dssp             HHHHHCSCCCEEEECCCCCCC-CCTTTSCHHH
T ss_pred             HHHHHcCCCCEEEECCCcCCC-CCcccCCHHH
Confidence            999999999999999998764 5666665543

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.73  E-value=3.4e-17  Score=126.15  Aligned_cols=94  Identities=17%  Similarity=0.149  Sum_probs=76.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHH-cCCcEEEEecCCCChHH---------HHHHHHHHHhccCCCCCCceEEEecCCC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQ-EGATVAFTYVKPQEDKD---------AKETLEMLREAKTPDAKDPMAISADLGF  107 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~-~g~~Vi~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~  107 (149)
                      -.+|++|||||++|||+++|+.|++ .|++|++++++......         .....+.+..    .+..+..+.+|+++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~----~G~~a~~i~~Dvtd  120 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQ----KGLYAKSINGDAFS  120 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHH----TTCCEEEEESCTTS
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHh----cCCceEEEECCCCC
Confidence            4689999999999999999999999 99999999887543221         0111222333    45667889999999


Q ss_pred             hHHHHHHHHHHHHhcCCccEEEeCCcCC
Q 044851          108 DENCKRVVDEVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       108 ~~~v~~~~~~~~~~~g~id~li~~ag~~  135 (149)
                      .++++.+++++.+++|++|+||||||+.
T Consensus       121 ~~~v~~~v~~i~~~~G~IDiLVNNAG~~  148 (405)
T 3zu3_A          121 DEIKQLTIDAIKQDLGQVDQVIYSLASP  148 (405)
T ss_dssp             HHHHHHHHHHHHHHTSCEEEEEECCCCS
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEcCccc
Confidence            9999999999999999999999999984

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.72  E-value=3.5e-17  Score=126.89  Aligned_cols=92  Identities=18%  Similarity=0.150  Sum_probs=76.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHH-cCCcEEEEecCCCChHH---------HHHHHHHHHhccCCCCCCceEEEecCCCh
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQ-EGATVAFTYVKPQEDKD---------AKETLEMLREAKTPDAKDPMAISADLGFD  108 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~-~g~~Vi~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~  108 (149)
                      .+|++|||||++|||+++|+.|++ .|++|++++|+.....+         .....+.+..    .+..+..+.+|+++.
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~----~G~~a~~i~~Dvtd~  135 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKA----AGLYSKSINGDAFSD  135 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH----TTCCEEEEESCTTSH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHh----cCCcEEEEEecCCCH
Confidence            589999999999999999999999 99999999987543321         0111233333    456778899999999


Q ss_pred             HHHHHHHHHHHHhc-CCccEEEeCCcC
Q 044851          109 ENCKRVVDEVVNAY-DRIDILVNNAAE  134 (149)
Q Consensus       109 ~~v~~~~~~~~~~~-g~id~li~~ag~  134 (149)
                      ++++.+++++.+++ |+||+||||||+
T Consensus       136 ~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          136 AARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             HHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            99999999999999 999999999997

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.72  E-value=7.2e-17  Score=117.11  Aligned_cols=98  Identities=28%  Similarity=0.352  Sum_probs=79.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCc-eEEEecCCChHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDP-MAISADLGFDENCKRVV  115 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dv~~~~~v~~~~  115 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+   ...+.+..+++       +..+ .++.+|+++.++++.++
T Consensus         8 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~---~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~   77 (254)
T 2wsb_A            8 RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDRE---AAALDRAAQEL-------GAAVAARIVADVTDAEAMTAAA   77 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHH-------GGGEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHh-------cccceeEEEEecCCHHHHHHHH
Confidence            4788999999999999999999999999999999997   33333333333       1234 67889999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      +++.+ ++++|+||||||+... .++.+.+.
T Consensus        78 ~~~~~-~~~id~li~~Ag~~~~-~~~~~~~~  106 (254)
T 2wsb_A           78 AEAEA-VAPVSILVNSAGIARL-HDALETDD  106 (254)
T ss_dssp             HHHHH-HSCCCEEEECCCCCCC-BCSTTCCH
T ss_pred             HHHHh-hCCCcEEEECCccCCC-CCcccCCH
Confidence            99988 8999999999998764 45555543

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.72  E-value=1.2e-17  Score=121.67  Aligned_cols=97  Identities=24%  Similarity=0.324  Sum_probs=78.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      |++||||+++|||++++++|++.|++|++++|+   .+.+.+..+++       ...+.++.+|+++.++++++++++.+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~~   70 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRR---QERLQELKDEL-------GDNLYIAQLDVRNRAAIEEMLASLPA   70 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHH-------CTTEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHh-------cCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            579999999999999999999999999999996   33333333332       23577889999999999999999999


Q ss_pred             hcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          121 AYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       121 ~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      .++++|+||||||+.....++.+.+.+
T Consensus        71 ~~g~iD~lvnnAg~~~~~~~~~~~~~~   97 (248)
T 3asu_A           71 EWCNIDILVNNAGLALGMEPAHKASVE   97 (248)
T ss_dssp             TTCCCCEEEECCCCCCCCSCGGGSCHH
T ss_pred             hCCCCCEEEECCCcCCCCCchhhCCHH
Confidence            999999999999986422456665544

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.72  E-value=4.4e-17  Score=117.57  Aligned_cols=99  Identities=27%  Similarity=0.350  Sum_probs=79.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEE-ecCCCChHHHHHHHHHHHhccCCCCCCceE-EEecCCChHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFT-YVKPQEDKDAKETLEMLREAKTPDAKDPMA-ISADLGFDENCKRVVDE  117 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dv~~~~~v~~~~~~  117 (149)
                      +|+++|||+++|||++++++|++.|++|+++ +|+   ...+.+..+++..    .+..+.+ +.+|+++.++++.++++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~---~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~   73 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQN---REKAEEVAEEARR----RGSPLVAVLGANLLEAEAATALVHQ   73 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSC---HHHHHHHHHHHHH----TTCSCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHHHh----cCCceEEEEeccCCCHHHHHHHHHH
Confidence            4689999999999999999999999999988 675   3334444444544    3445666 88999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      +.+.++++|+||||||+... .++.+.+.
T Consensus        74 ~~~~~~~~d~li~~Ag~~~~-~~~~~~~~  101 (245)
T 2ph3_A           74 AAEVLGGLDTLVNNAGITRD-TLLVRMKD  101 (245)
T ss_dssp             HHHHHTCCCEEEECCCCCCC-BCGGGCCH
T ss_pred             HHHhcCCCCEEEECCCCCCC-CCcccCCH
Confidence            99999999999999998654 45555543

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.71  E-value=4.6e-17  Score=119.63  Aligned_cols=102  Identities=18%  Similarity=0.188  Sum_probs=80.7

Q ss_pred             CCCCCEEEEecC--CChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRGMVALVTGG--DSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~--s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .+++|++||||+  ++|||++++++|++.|++|++++|+..  ..+.+    +...   .+.++.++.+|+++.++++++
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~--~~~~~----~~~~---~~~~~~~~~~Dv~~~~~v~~~   74 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRL--RLIQR----ITDR---LPAKAPLLELDVQNEEHLASL   74 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCH--HHHHH----HHTT---SSSCCCEEECCTTCHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChH--HHHHH----HHHh---cCCCceEEEccCCCHHHHHHH
Confidence            367899999999  999999999999999999999998732  11122    2211   234577899999999999999


Q ss_pred             HHHHHHhcC---CccEEEeCCcCCCC----CCCCCCCCCC
Q 044851          115 VDEVVNAYD---RIDILVNNAAEQYE----CGSVEDIDES  147 (149)
Q Consensus       115 ~~~~~~~~g---~id~li~~ag~~~~----~~~~~~~s~~  147 (149)
                      ++++.+.+|   ++|+||||||+...    ..++.+.+.+
T Consensus        75 ~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~  114 (269)
T 2h7i_A           75 AGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYA  114 (269)
T ss_dssp             HHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHH
T ss_pred             HHHHHHHhCCCCCceEEEECCccCccccccccccccCCHH
Confidence            999999999   99999999998652    2456665544

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.71  E-value=2.1e-17  Score=121.13  Aligned_cols=91  Identities=23%  Similarity=0.319  Sum_probs=75.1

Q ss_pred             CCCCEEEEecCC--ChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           38 LRGMVALVTGGD--SGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        38 ~~~~~~litG~s--~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +++|++||||++  +|||++++++|++.|++|++++|+. ..   .+..+++...   .+ ...++.+|+++.+++++++
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~---~~~~~~l~~~---~~-~~~~~~~D~~~~~~v~~~~   78 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KL---KGRVEEFAAQ---LG-SDIVLQCDVAEDASIDTMF   78 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TT---HHHHHHHHHH---TT-CCCEEECCTTCHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HH---HHHHHHHHHh---cC-CcEEEEccCCCHHHHHHHH
Confidence            678999999999  9999999999999999999999975 22   2233333321   12 2378899999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~  136 (149)
                      +++.+.++++|+||||||+..
T Consensus        79 ~~~~~~~g~iD~lv~~Ag~~~   99 (265)
T 1qsg_A           79 AELGKVWPKFDGFVHSIGFAP   99 (265)
T ss_dssp             HHHHTTCSSEEEEEECCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCCC
Confidence            999999999999999999865

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.71  E-value=1.5e-16  Score=116.28  Aligned_cols=93  Identities=26%  Similarity=0.352  Sum_probs=79.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHH-cCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQ-EGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~-~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .++|++|||||++|||++++++|++ .|++|++++|+   .....+..+++..    .+.++.++.+|+++.++++.+++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~---~~~~~~~~~~l~~----~~~~~~~~~~Dl~~~~~~~~~~~   74 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARD---VTRGQAAVQQLQA----EGLSPRFHQLDIDDLQSIRALRD   74 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESS---HHHHHHHHHHHHH----TTCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCC---hHHHHHHHHHHHh----cCCeeEEEECCCCCHHHHHHHHH
Confidence            3578999999999999999999999 89999999996   3344455555554    34567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~  137 (149)
                      ++.+.++++|+||||||+...
T Consensus        75 ~~~~~~g~id~li~~Ag~~~~   95 (276)
T 1wma_A           75 FLRKEYGGLDVLVNNAGIAFK   95 (276)
T ss_dssp             HHHHHHSSEEEEEECCCCCCC
T ss_pred             HHHHhcCCCCEEEECCccccc
Confidence            999999999999999998653

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.71  E-value=9.7e-17  Score=117.62  Aligned_cols=94  Identities=32%  Similarity=0.463  Sum_probs=77.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|++|||||++|||++++++|++.|++|++++|+   .+...+..+++....  .+..+.++.+|++|.++++.+++.
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~v~~~~~~   79 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWN---LEAGVQCKAALHEQF--EPQKTLFIQCDVADQQQLRDTFRK   79 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHTTTS--CGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHhhc--CCCceEEEecCCCCHHHHHHHHHH
Confidence            578999999999999999999999999999999986   333333444443210  123577889999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCC
Q 044851          118 VVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~  136 (149)
                      +.+.++++|+||||||+..
T Consensus        80 ~~~~~g~id~lv~~Ag~~~   98 (267)
T 2gdz_A           80 VVDHFGRLDILVNNAGVNN   98 (267)
T ss_dssp             HHHHHSCCCEEEECCCCCC
T ss_pred             HHHHcCCCCEEEECCCCCC
Confidence            9999999999999999753

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.71  E-value=5.3e-17  Score=117.98  Aligned_cols=92  Identities=25%  Similarity=0.353  Sum_probs=74.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||++++++|++.|++|++++|+....                  ..+..+.+|+++.++++.+++
T Consensus        12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~------------------~~~~~~~~D~~~~~~~~~~~~   73 (247)
T 1uzm_A           12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP------------------KGLFGVEVDVTDSDAVDRAFT   73 (247)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC------------------TTSEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH------------------HHhcCeeccCCCHHHHHHHHH
Confidence            46789999999999999999999999999999999974321                  112247899999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||||+... .++.+.+.+
T Consensus        74 ~~~~~~g~id~lv~~Ag~~~~-~~~~~~~~~  103 (247)
T 1uzm_A           74 AVEEHQGPVEVLVSNAGLSAD-AFLMRMTEE  103 (247)
T ss_dssp             HHHHHHSSCSEEEEECSCCC------CCCHH
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CChhhCCHH
Confidence            999999999999999998754 566666544

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.71  E-value=8.3e-17  Score=126.55  Aligned_cols=102  Identities=32%  Similarity=0.491  Sum_probs=82.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+.+|++||||+++|||+++|++|+++|++|++++|+.. .+.+.+..+++         .+.++.||++|.++++.++
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~-~~~l~~~~~~~---------~~~~~~~Dvtd~~~v~~~~  278 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGA-AEDLKRVADKV---------GGTALTLDVTADDAVDKIT  278 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGG-HHHHHHHHHHH---------TCEEEECCTTSTTHHHHHH
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCcc-HHHHHHHHHHc---------CCeEEEEecCCHHHHHHHH
Confidence            3468999999999999999999999999999999988632 22232222221         2468899999999999999


Q ss_pred             HHHHHhcCC-ccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDR-IDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       116 ~~~~~~~g~-id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++.+++++ +|+||||||+... +.+.+++.++
T Consensus       279 ~~~~~~~g~~id~lV~nAGv~~~-~~~~~~~~~~  311 (454)
T 3u0b_A          279 AHVTEHHGGKVDILVNNAGITRD-KLLANMDEKR  311 (454)
T ss_dssp             HHHHHHSTTCCSEEEECCCCCCC-CCGGGCCHHH
T ss_pred             HHHHHHcCCCceEEEECCcccCC-CccccCCHHH
Confidence            999999986 9999999999876 6777777654

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.70  E-value=2e-16  Score=116.71  Aligned_cols=90  Identities=18%  Similarity=0.323  Sum_probs=75.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++|||||++|||+++|++|++.|++|++++|+   .+.+.+..+++       +.++.++.+|+++.+++++++
T Consensus        26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~---~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~   95 (281)
T 3ppi_A           26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLA---AEKGKALADEL-------GNRAEFVSTNVTSEDSVLAAI   95 (281)
T ss_dssp             GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHH-------CTTEEEEECCTTCHHHHHHHH
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC---hHHHHHHHHHh-------CCceEEEEcCCCCHHHHHHHH
Confidence            45789999999999999999999999999999999997   33444444333       346788999999999999999


Q ss_pred             HHHHHhcCCccEEEeC-CcCCC
Q 044851          116 DEVVNAYDRIDILVNN-AAEQY  136 (149)
Q Consensus       116 ~~~~~~~g~id~li~~-ag~~~  136 (149)
                      +++ ++++++|+|||| +|+..
T Consensus        96 ~~~-~~~~~id~lv~~aag~~~  116 (281)
T 3ppi_A           96 EAA-NQLGRLRYAVVAHGGFGV  116 (281)
T ss_dssp             HHH-TTSSEEEEEEECCCCCCC
T ss_pred             HHH-HHhCCCCeEEEccCcccc
Confidence            999 888999999999 55543

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.70  E-value=8.4e-17  Score=115.62  Aligned_cols=97  Identities=22%  Similarity=0.323  Sum_probs=78.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .+|+++||||++|||++++++|++.|++|++++|+   ...+.+..+++        ..+.++.+|+++.++++++++++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~--------~~~~~~~~D~~~~~~~~~~~~~~   72 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARD---EKRLQALAAEL--------EGALPLPGDVREEGDWARAVAAM   72 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHS--------TTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHh--------hhceEEEecCCCHHHHHHHHHHH
Confidence            46789999999999999999999999999999986   33333222211        15678899999999999999999


Q ss_pred             HHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          119 VNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      .+.++++|+||||||+... .++.+.+.+
T Consensus        73 ~~~~~~id~li~~Ag~~~~-~~~~~~~~~  100 (234)
T 2ehd_A           73 EEAFGELSALVNNAGVGVM-KPVHELTLE  100 (234)
T ss_dssp             HHHHSCCCEEEECCCCCCC-SCGGGCCHH
T ss_pred             HHHcCCCCEEEECCCcCCC-CCcccCCHH
Confidence            9999999999999998654 555555543

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.70  E-value=1.1e-16  Score=118.46  Aligned_cols=93  Identities=23%  Similarity=0.289  Sum_probs=76.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+|+++||||++|||++++++|++.|++|++++|+   ...+.+..+++...   ....+.++.+|++|.++++.+++
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~v~~~~~   98 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARS---KETLQKVVSHCLEL---GAASAHYIAGTMEDMTFAEQFVA   98 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHH---TCSEEEEEECCTTCHHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHHh---CCCceEEEeCCCCCHHHHHHHHH
Confidence            3678999999999999999999999999999999997   33344444444331   22357789999999999999999


Q ss_pred             HHHHhcCCccEEEeC-CcCC
Q 044851          117 EVVNAYDRIDILVNN-AAEQ  135 (149)
Q Consensus       117 ~~~~~~g~id~li~~-ag~~  135 (149)
                      ++.+.++++|+|||| +|+.
T Consensus        99 ~~~~~~g~iD~li~naag~~  118 (286)
T 1xu9_A           99 QAGKLMGGLDMLILNHITNT  118 (286)
T ss_dssp             HHHHHHTSCSEEEECCCCCC
T ss_pred             HHHHHcCCCCEEEECCccCC
Confidence            999999999999999 5664

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.70  E-value=5.8e-17  Score=116.94  Aligned_cols=99  Identities=16%  Similarity=0.266  Sum_probs=79.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC--CcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEG--ATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      |++|++||||+++|||++++++|++.|  ++|++++|+....+.       +...   .+.++.++.+|+++.+++.+++
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~-------l~~~---~~~~~~~~~~D~~~~~~~~~~~   70 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-------LKSI---KDSRVHVLPLTVTCDKSLDTFV   70 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHH-------HHTC---CCTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHH-------HHhc---cCCceEEEEeecCCHHHHHHHH
Confidence            357899999999999999999999999  999999997433221       1111   2456788999999999999999


Q ss_pred             HHHHHhcC--CccEEEeCCcCCCCCCCCCCCCC
Q 044851          116 DEVVNAYD--RIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       116 ~~~~~~~g--~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      +++.+.++  ++|+||||||+..+..++.+.+.
T Consensus        71 ~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~  103 (250)
T 1yo6_A           71 SKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNR  103 (250)
T ss_dssp             HHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCH
T ss_pred             HHHHHhcCCCCCcEEEECCcccCCCcccccCCH
Confidence            99999998  89999999998762255655544

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.70  E-value=1.3e-16  Score=116.39  Aligned_cols=86  Identities=26%  Similarity=0.323  Sum_probs=70.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||++++++|++.|++|++++|+   .++..   ++       .+..+.++.+|+++.++++.+++
T Consensus         6 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~---~~-------~~~~~~~~~~D~~~~~~v~~~~~   72 (257)
T 3tl3_A            6 EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVV---AD-------LGDRARFAAADVTDEAAVASALD   72 (257)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS---CHHHH---HH-------TCTTEEEEECCTTCHHHHHHHHH
T ss_pred             eecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCc---hHHHH---Hh-------cCCceEEEECCCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999985   22221   11       24567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~  136 (149)
                      .+.+ ++++|+||||||+..
T Consensus        73 ~~~~-~g~id~lv~nAg~~~   91 (257)
T 3tl3_A           73 LAET-MGTLRIVVNCAGTGN   91 (257)
T ss_dssp             HHHH-HSCEEEEEECGGGSH
T ss_pred             HHHH-hCCCCEEEECCCCCC
Confidence            8877 899999999999864

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.69  E-value=4.2e-17  Score=129.37  Aligned_cols=105  Identities=21%  Similarity=0.240  Sum_probs=86.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .++++|||||++|||..++++|+++|+ +|++++|+....+...+..+++..    .+.++.++.||++|.+++..++++
T Consensus       238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~----~g~~v~~~~~Dvtd~~~v~~~~~~  313 (496)
T 3mje_A          238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQ----LGVRVTIAACDAADREALAALLAE  313 (496)
T ss_dssp             CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHH----TTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHh----cCCeEEEEEccCCCHHHHHHHHHH
Confidence            358999999999999999999999999 588888875444455566666665    567889999999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +.+. +++|+||||||+.....++.+++.++
T Consensus       314 i~~~-g~ld~vVh~AGv~~~~~~l~~~t~e~  343 (496)
T 3mje_A          314 LPED-APLTAVFHSAGVAHDDAPVADLTLGQ  343 (496)
T ss_dssp             CCTT-SCEEEEEECCCCCCSCCCTTTCCHHH
T ss_pred             HHHh-CCCeEEEECCcccCCCCCcccCCHHH
Confidence            8766 68999999999973336777776554

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.69  E-value=2e-16  Score=117.47  Aligned_cols=87  Identities=24%  Similarity=0.305  Sum_probs=71.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+   ...+.+..++       .+.++.++.+|++|.++++++++
T Consensus        13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~---~~~~~~~~~~-------~~~~~~~~~~Dl~d~~~v~~~~~   82 (291)
T 3rd5_A           13 SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRD---TRKGEAAART-------MAGQVEVRELDLQDLSSVRRFAD   82 (291)
T ss_dssp             CCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHTT-------SSSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHH-------hcCCeeEEEcCCCCHHHHHHHHH
Confidence            5789999999999999999999999999999999997   3333332221       24467889999999999988887


Q ss_pred             HHHHhcCCccEEEeCCcCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~  137 (149)
                      ++    +++|+||||||+..+
T Consensus        83 ~~----~~iD~lv~nAg~~~~   99 (291)
T 3rd5_A           83 GV----SGADVLINNAGIMAV   99 (291)
T ss_dssp             TC----CCEEEEEECCCCCSC
T ss_pred             hc----CCCCEEEECCcCCCC
Confidence            76    789999999998643

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.69  E-value=1.8e-16  Score=119.44  Aligned_cols=103  Identities=29%  Similarity=0.459  Sum_probs=80.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC------CChHHHHHHHHHHHhccCCCCCCceEEEecCCChHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP------QEDKDAKETLEMLREAKTPDAKDPMAISADLGFDEN  110 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~  110 (149)
                      .+.+|++||||+++|||++++++|++.|++|+++++..      .....+.+..+++..    .+.   ...+|+++.++
T Consensus         6 ~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~----~~~---~~~~D~~~~~~   78 (319)
T 1gz6_A            6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR----RGG---KAVANYDSVEA   78 (319)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH----TTC---EEEEECCCGGG
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHh----hCC---eEEEeCCCHHH
Confidence            47899999999999999999999999999999976531      123344555555554    222   23589999999


Q ss_pred             HHHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          111 CKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       111 v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+++++.+.++++|+||||||+... .++.+.+.+
T Consensus        79 ~~~~~~~~~~~~g~iD~lVnnAG~~~~-~~~~~~~~~  114 (319)
T 1gz6_A           79 GEKLVKTALDTFGRIDVVVNNAGILRD-RSFSRISDE  114 (319)
T ss_dssp             HHHHHHHHHHHTSCCCEEEECCCCCCC-CCGGGCCHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCC-CChhhCCHH
Confidence            999999999999999999999998765 566666544

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.69  E-value=1.1e-16  Score=116.56  Aligned_cols=90  Identities=16%  Similarity=0.156  Sum_probs=73.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      ...+|++|||||++|||+++|++|++.|++|++++|+....                   ....+.+|++|.++++++++
T Consensus        19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~-------------------~~~~~~~d~~d~~~v~~~~~   79 (251)
T 3orf_A           19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN-------------------ADHSFTIKDSGEEEIKSVIE   79 (251)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-------------------SSEEEECSCSSHHHHHHHHH
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-------------------cccceEEEeCCHHHHHHHHH
Confidence            45689999999999999999999999999999999974321                   12357799999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      ++.+.++++|+||||||+......+.+.+
T Consensus        80 ~~~~~~g~iD~li~~Ag~~~~~~~~~~~~  108 (251)
T 3orf_A           80 KINSKSIKVDTFVCAAGGWSGGNASSDEF  108 (251)
T ss_dssp             HHHTTTCCEEEEEECCCCCCCBCTTSTTH
T ss_pred             HHHHHcCCCCEEEECCccCCCCCcccccC
Confidence            99999999999999999876533344443

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.69  E-value=8.4e-17  Score=130.42  Aligned_cols=105  Identities=20%  Similarity=0.350  Sum_probs=81.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC------ChHHHHHHHHHHHhccCCCCCCceEEEecCCChHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ------EDKDAKETLEMLREAKTPDAKDPMAISADLGFDEN  110 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~  110 (149)
                      .+++|++||||+++|||+++|+.|++.|++|++++++..      ....+.+..+++..    .+..   ..+|++|.++
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~----~g~~---~~~d~~d~~~   77 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVK----NGGV---AVADYNNVLD   77 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHH----TTCE---EEEECCCTTC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHh----cCCe---EEEEcCCHHH
Confidence            478999999999999999999999999999999987531      11334445555554    2322   2368898888


Q ss_pred             HHHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          111 CKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       111 v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++++++++.+.+|+||+||||||+... .++.+++.++|
T Consensus        78 ~~~~v~~~~~~~G~iDiLVnNAGi~~~-~~~~~~~~~~~  115 (604)
T 2et6_A           78 GDKIVETAVKNFGTVHVIINNAGILRD-ASMKKMTEKDY  115 (604)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCC-BCTTTCCHHHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCC-CChhhCCHHHH
Confidence            999999999999999999999999765 67888876654

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.68  E-value=1.5e-16  Score=115.42  Aligned_cols=98  Identities=23%  Similarity=0.358  Sum_probs=68.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+++|++|||||++|||++++++|++.|++|++++|+   .+.+.+..+++       ...+.++.+|+++.+++.+++
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~   79 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSN---EEKLKSLGNAL-------KDNYTIEVCNLANKEECSNLI   79 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHH-------CSSEEEEECCTTSHHHHHHHH
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC---HHHHHHHHHHh-------ccCccEEEcCCCCHHHHHHHH
Confidence            35789999999999999999999999999999999996   33444433332       235678889999999888776


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++    .+++|+||||||+... ..+.+.+.++
T Consensus        80 ~~----~~~id~li~~Ag~~~~-~~~~~~~~~~  107 (249)
T 3f9i_A           80 SK----TSNLDILVCNAGITSD-TLAIRMKDQD  107 (249)
T ss_dssp             HT----CSCCSEEEECCC--------------C
T ss_pred             Hh----cCCCCEEEECCCCCCC-CccccCCHHH
Confidence            54    4789999999998765 5566665554

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.68  E-value=3.5e-17  Score=130.70  Aligned_cols=104  Identities=15%  Similarity=0.183  Sum_probs=83.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCc-EEEE-ecCCCC----------hHHHHHHHHHHHhccCCCCCCceEEEecCC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFT-YVKPQE----------DKDAKETLEMLREAKTPDAKDPMAISADLG  106 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~-~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~  106 (149)
                      .++++|||||++|||..+|++|+++|++ |+++ +|+...          .+.+.+..+++..    .+.++.++.||++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~----~g~~v~~~~~Dvt  325 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELAD----LGATATVVTCDLT  325 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHH----HTCEEEEEECCTT
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHh----cCCEEEEEECCCC
Confidence            5789999999999999999999999998 6677 887433          2344455566655    4667889999999


Q ss_pred             ChHHHHHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          107 FDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       107 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      |.+++..+++++. +++++|+||||||+... ..+.+++.++
T Consensus       326 d~~~v~~~~~~i~-~~g~id~vVh~AGv~~~-~~~~~~~~~~  365 (525)
T 3qp9_A          326 DAEAAARLLAGVS-DAHPLSAVLHLPPTVDS-EPLAATDADA  365 (525)
T ss_dssp             SHHHHHHHHHTSC-TTSCEEEEEECCCCCCC-CCTTTCCHHH
T ss_pred             CHHHHHHHHHHHH-hcCCCcEEEECCcCCCC-CchhhCCHHH
Confidence            9999999999998 78999999999999876 6777776554

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.68  E-value=2.1e-16  Score=114.15  Aligned_cols=92  Identities=28%  Similarity=0.444  Sum_probs=76.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +|++||||+++|||++++++|++.|++|++++|+..   .+   .+++       +  +.++.+|+++ +++..+++++.
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~---~~---~~~~-------~--~~~~~~D~~~-~~~~~~~~~~~   65 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPE---EA---AQSL-------G--AVPLPTDLEK-DDPKGLVKRAL   65 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH---HH---HHHH-------T--CEEEECCTTT-SCHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH---HH---HHhh-------C--cEEEecCCch-HHHHHHHHHHH
Confidence            678999999999999999999999999999999732   11   1111       1  5788999999 99999999999


Q ss_pred             HhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          120 NAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +.++++|+||||||+... .++.+.+.++
T Consensus        66 ~~~g~id~lv~~Ag~~~~-~~~~~~~~~~   93 (239)
T 2ekp_A           66 EALGGLHVLVHAAAVNVR-KPALELSYEE   93 (239)
T ss_dssp             HHHTSCCEEEECCCCCCC-CCTTTCCHHH
T ss_pred             HHcCCCCEEEECCCCCCC-CChhhCCHHH
Confidence            999999999999998764 5666665543

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.67  E-value=5.8e-17  Score=116.85  Aligned_cols=90  Identities=16%  Similarity=0.268  Sum_probs=73.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      |++|++||||+++|||++++++|++.|++|++++|+.....                 ....++.+|+++.+++++++++
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------------~~~~~~~~D~~~~~~~~~~~~~   63 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------------DSNILVDGNKNWTEQEQSILEQ   63 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------------SEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----------------cccEEEeCCCCCHHHHHHHHHH
Confidence            35789999999999999999999999999999999743211                 1235678999999999999999


Q ss_pred             HHHhc--CCccEEEeCCcCCCCCCCC-CCCC
Q 044851          118 VVNAY--DRIDILVNNAAEQYECGSV-EDID  145 (149)
Q Consensus       118 ~~~~~--g~id~li~~ag~~~~~~~~-~~~s  145 (149)
                      +.+.+  +++|+||||||+... .++ .+.+
T Consensus        64 ~~~~~~~g~id~lv~~Ag~~~~-~~~~~~~~   93 (236)
T 1ooe_A           64 TASSLQGSQVDGVFCVAGGWAG-GSASSKDF   93 (236)
T ss_dssp             HHHHHTTCCEEEEEECCCCCCC-BCTTSTTH
T ss_pred             HHHHhCCCCCCEEEECCcccCC-CCCcccCC
Confidence            99998  799999999998654 444 4433

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.67  E-value=7.2e-17  Score=131.02  Aligned_cols=106  Identities=28%  Similarity=0.432  Sum_probs=70.9

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC------CChHHHHHHHHHHHhccCCCCCCceEEEecCCCh
Q 044851           35 SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP------QEDKDAKETLEMLREAKTPDAKDPMAISADLGFD  108 (149)
Q Consensus        35 ~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~  108 (149)
                      ...++||++|||||++|||+++|++|++.|++|++++|+.      .....+....+++..    .+..   +.+|+++.
T Consensus        14 ~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~----~~~~---~~~D~~d~   86 (613)
T 3oml_A           14 KLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRK----AGGE---AVADYNSV   86 (613)
T ss_dssp             -CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHH----TTCC---EEECCCCG
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHH----hCCe---EEEEeCCH
Confidence            3468999999999999999999999999999999998721      112334445555554    2322   34899999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          109 ENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       109 ~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++.++++++.+.++++|+||||||+... .++.+++.++
T Consensus        87 ~~~~~~~~~~~~~~g~iDiLVnnAGi~~~-~~~~~~~~~~  125 (613)
T 3oml_A           87 IDGAKVIETAIKAFGRVDILVNNAGILRD-RSLVKTSEQD  125 (613)
T ss_dssp             GGHHHHHC----------CEECCCCCCCC-CCSTTCCHHH
T ss_pred             HHHHHHHHHHHHHCCCCcEEEECCCCCCC-CCcccCCHHH
Confidence            99999999999999999999999999866 6777776654

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.67  E-value=8.6e-17  Score=116.35  Aligned_cols=90  Identities=20%  Similarity=0.224  Sum_probs=74.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .++|++||||+++|||++++++|++.|++|++++|+.....                 ....++.+|+++.+++++++++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----------------~~~~~~~~D~~~~~~v~~~~~~   67 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------------SASVIVKMTDSFTEQADQVTAE   67 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------------SEEEECCCCSCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----------------CCcEEEEcCCCCHHHHHHHHHH
Confidence            46789999999999999999999999999999999743211                 1245678999999999999999


Q ss_pred             HHHhc--CCccEEEeCCcCCCCCCCC-CCCC
Q 044851          118 VVNAY--DRIDILVNNAAEQYECGSV-EDID  145 (149)
Q Consensus       118 ~~~~~--g~id~li~~ag~~~~~~~~-~~~s  145 (149)
                      +.+.+  +++|+||||||+... .++ .+.+
T Consensus        68 ~~~~~~~g~iD~lv~~Ag~~~~-~~~~~~~~   97 (241)
T 1dhr_A           68 VGKLLGDQKVDAILCVAGGWAG-GNAKSKSL   97 (241)
T ss_dssp             HHHHHTTCCEEEEEECCCCCCC-BCTTCTTH
T ss_pred             HHHHhCCCCCCEEEEcccccCC-CCCcccCC
Confidence            99999  799999999998754 444 4443

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.66  E-value=5.2e-16  Score=112.88  Aligned_cols=92  Identities=13%  Similarity=0.167  Sum_probs=74.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCCh-HHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFD-ENCKRVV  115 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~  115 (149)
                      +++|+++||||++|||++++++|++.|++ |++++|+... ..+    +++....  .+..+.++.+|+++. +++++++
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~-~~~----~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~   75 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP-TAL----AELKAIN--PKVNITFHTYDVTVPVAESKKLL   75 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH-HHH----HHHHHHC--TTSEEEEEECCTTSCHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH-HHH----HHHHHhC--CCceEEEEEEecCCChHHHHHHH
Confidence            67899999999999999999999999997 8999987431 222    2222211  134577889999998 9999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~  136 (149)
                      +++.+.++++|+||||||+..
T Consensus        76 ~~~~~~~g~id~lv~~Ag~~~   96 (254)
T 1sby_A           76 KKIFDQLKTVDILINGAGILD   96 (254)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHhcCCCCEEEECCccCC
Confidence            999999999999999999853

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.66  E-value=1.2e-16  Score=120.78  Aligned_cols=105  Identities=23%  Similarity=0.263  Sum_probs=79.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .+|++||||+++|||++++++|++.|++|++++++........+.++..... ...+.++.++.+|+++.++++.+++++
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~d~~~v~~~~~~~   79 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARAL-ACPPGSLETLQLDVRDSKSVAAARERV   79 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHT-TCCTTSEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhc-cCCCCceEEEEecCCCHHHHHHHHHHH
Confidence            3689999999999999999999999999888887654444444444333210 002356788999999999999999988


Q ss_pred             HHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          119 VNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                        .++++|+||||||+... .++.+.+.+
T Consensus        80 --~~g~iD~lVnnAG~~~~-~~~~~~~~~  105 (327)
T 1jtv_A           80 --TEGRVDVLVCNAGLGLL-GPLEALGED  105 (327)
T ss_dssp             --TTSCCSEEEECCCCCCC-SCGGGSCHH
T ss_pred             --hcCCCCEEEECCCcCCC-CchhhCCHH
Confidence              35889999999998654 566665544

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.66  E-value=2.2e-16  Score=127.99  Aligned_cols=101  Identities=26%  Similarity=0.470  Sum_probs=79.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||+++|+.|++.|++|++.+++.  .+   +..+++..    .+..+..+.+|++  .+.+.+++
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~---~~~~~i~~----~g~~~~~~~~Dv~--~~~~~~~~  387 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--AT---KTVDEIKA----AGGEAWPDQHDVA--KDSEAIIK  387 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CH---HHHHHHHH----TTCEEEEECCCHH--HHHHHHHH
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HH---HHHHHHHh----cCCeEEEEEcChH--HHHHHHHH
Confidence            57899999999999999999999999999999988642  22   23344443    3445566777874  55678899


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++.+++|++|+||||||+... +++.+++.++|
T Consensus       388 ~~~~~~G~iDiLVnNAGi~~~-~~~~~~~~~~~  419 (604)
T 2et6_A          388 NVIDKYGTIDILVNNAGILRD-RSFAKMSKQEW  419 (604)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC-BCTTTCCHHHH
T ss_pred             HHHHhcCCCCEEEECCCCCCC-CChhhCCHHHH
Confidence            999999999999999999765 67888876654

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.66  E-value=1.2e-16  Score=132.91  Aligned_cols=105  Identities=19%  Similarity=0.277  Sum_probs=90.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHH-HcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFA-QEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~-~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .++++||||+++|||+++|++|+ ++|++ |++++|+....+.+.+.++++..    .+.++.++.||++|.++++++++
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~----~G~~v~~~~~Dvsd~~~v~~~~~  604 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTA----YGAEVSLQACDVADRETLAKVLA  604 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHH----TTCEEEEEECCTTCHHHHHHHHH
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHh----cCCcEEEEEeecCCHHHHHHHHH
Confidence            57899999999999999999999 78995 88999985555556677777766    67788999999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++.+.+ +||+||||||+... ..+.+++.++|
T Consensus       605 ~~~~~~-~id~lVnnAGv~~~-~~~~~~t~e~~  635 (795)
T 3slk_A          605 SIPDEH-PLTAVVHAAGVLDD-GVSESLTVERL  635 (795)
T ss_dssp             TSCTTS-CEEEEEECCCCCCC-CCGGGCCHHHH
T ss_pred             HHHHhC-CCEEEEECCCcCCC-CchhhCCHHHH
Confidence            987776 89999999999876 78888877653

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.66  E-value=2.9e-16  Score=113.90  Aligned_cols=94  Identities=30%  Similarity=0.410  Sum_probs=72.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||++++++|++.|++|++++|+.   ..+.+    +..    . .++.++.+|+++.++++    
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~----~~~----~-~~~~~~~~D~~~~~~~~----   66 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINE---SKLQE----LEK----Y-PGIQTRVLDVTKKKQID----   66 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHGG----GGG----S-TTEEEEECCTTCHHHHH----
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH---HHHHH----HHh----c-cCceEEEeeCCCHHHHH----
Confidence            36789999999999999999999999999999999862   22211    111    1 15678899999999887    


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++.+.++++|+||||||+... .++.+.+.+
T Consensus        67 ~~~~~~~~id~lv~~Ag~~~~-~~~~~~~~~   96 (246)
T 2ag5_A           67 QFANEVERLDVLFNVAGFVHH-GTVLDCEEK   96 (246)
T ss_dssp             HHHHHCSCCSEEEECCCCCCC-BCGGGCCHH
T ss_pred             HHHHHhCCCCEEEECCccCCC-CCcccCCHH
Confidence            445567899999999998765 566666544

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.64  E-value=9.4e-16  Score=110.67  Aligned_cols=94  Identities=28%  Similarity=0.345  Sum_probs=72.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||.+++++|++.|++|++++|+   ...+.+..+++        ....++.+|+++.++++++++
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~--------~~~~~~~~D~~~~~~~~~~~~   72 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRT---QADLDSLVREC--------PGIEPVCVDLGDWEATERALG   72 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHS--------TTCEEEECCTTCHHHHHHHHT
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHc--------CCCCEEEEeCCCHHHHHHHHH
Confidence            4788999999999999999999999999999999986   23333222211        134667899999998888776


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                          .++++|+||||||+... .++.+.+.
T Consensus        73 ----~~~~id~vi~~Ag~~~~-~~~~~~~~   97 (244)
T 3d3w_A           73 ----SVGPVDLLVNNAAVALL-QPFLEVTK   97 (244)
T ss_dssp             ----TCCCCCEEEECCCCCCC-BCGGGCCH
T ss_pred             ----HcCCCCEEEECCccCCC-cchhhCCH
Confidence                56789999999998654 45555543

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.64  E-value=8.5e-16  Score=110.81  Aligned_cols=94  Identities=26%  Similarity=0.354  Sum_probs=72.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||++++++|++.|++|++++|+   ...+.+..++        .....++.+|+++.++++++++
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~   72 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT---NSDLVSLAKE--------CPGIEPVCVDLGDWDATEKALG   72 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHH--------STTCEEEECCTTCHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHh--------ccCCCcEEecCCCHHHHHHHHH
Confidence            4788999999999999999999999999999999986   2333322221        1234667899999998888776


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                          .++++|+||||||+... .++.+.+.
T Consensus        73 ----~~~~id~vi~~Ag~~~~-~~~~~~~~   97 (244)
T 1cyd_A           73 ----GIGPVDLLVNNAALVIM-QPFLEVTK   97 (244)
T ss_dssp             ----TCCCCSEEEECCCCCCC-BCGGGCCH
T ss_pred             ----HcCCCCEEEECCcccCC-CCcccCCH
Confidence                56789999999998754 45555544

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.64  E-value=1.5e-15  Score=118.03  Aligned_cols=94  Identities=17%  Similarity=0.181  Sum_probs=76.5

Q ss_pred             CCCCEEEEecCCChHHHH--HHHHHHHcCCcEEEEecCCCChHH---------HHHHHHHHHhccCCCCCCceEEEecCC
Q 044851           38 LRGMVALVTGGDSGIGRA--VCHCFAQEGATVAFTYVKPQEDKD---------AKETLEMLREAKTPDAKDPMAISADLG  106 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~--~a~~L~~~g~~Vi~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Dv~  106 (149)
                      ..+|++|||||++|||++  +++.|++.|++|++++|+......         .....+.+..    .+..+.++.+|++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~~~~Dvt  133 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKK----KGLVAKNFIEDAF  133 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHH----TTCCEEEEESCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHH----cCCcEEEEEeeCC
Confidence            578999999999999999  999999999999999987543210         1122222233    4566888999999


Q ss_pred             ChHHHHHHHHHHHHhcCCccEEEeCCcCC
Q 044851          107 FDENCKRVVDEVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       107 ~~~~v~~~~~~~~~~~g~id~li~~ag~~  135 (149)
                      +.++++.+++++.+++|++|+||||||..
T Consensus       134 d~~~v~~~v~~i~~~~G~IDiLVnNAG~~  162 (418)
T 4eue_A          134 SNETKDKVIKYIKDEFGKIDLFVYSLAAP  162 (418)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCccc
Confidence            99999999999999999999999999984

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.64  E-value=3.8e-16  Score=112.13  Aligned_cols=94  Identities=16%  Similarity=0.277  Sum_probs=73.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      |++|||||++|||++++++|++.|++|++++|+   .+.+.+..++       .+.++.++.+|+++.++++.+++++.+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~-------~~~~~~~~~~D~~~~~~v~~~~~~~~~   71 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRS---ESKLSTVTNC-------LSNNVGYRARDLASHQEVEQLFEQLDS   71 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESC---HHHHHHHHHT-------CSSCCCEEECCTTCHHHHHHHHHSCSS
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHH-------HhhccCeEeecCCCHHHHHHHHHHHhh
Confidence            579999999999999999999999999999997   3333333222       245678899999999999999887744


Q ss_pred             hcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          121 AYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       121 ~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                         .+|+||||||+... .++.+.+.++
T Consensus        72 ---~~d~lv~~Ag~~~~-~~~~~~~~~~   95 (230)
T 3guy_A           72 ---IPSTVVHSAGSGYF-GLLQEQDPEQ   95 (230)
T ss_dssp             ---CCSEEEECCCCCCC-SCGGGSCHHH
T ss_pred             ---cCCEEEEeCCcCCC-CccccCCHHH
Confidence               34999999998765 6676666543

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.64  E-value=4.4e-16  Score=112.80  Aligned_cols=90  Identities=31%  Similarity=0.324  Sum_probs=73.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHH-cCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQ-EGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~-~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      ++|++|||||++|||+++|++|++ .|+.|++++++...                 ....+.++.+|+++.++++++++.
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~-----------------~~~~~~~~~~Dv~~~~~v~~~~~~   65 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF-----------------SAENLKFIKADLTKQQDITNVLDI   65 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC-----------------CCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc-----------------ccccceEEecCcCCHHHHHHHHHH
Confidence            578999999999999999999999 78889998886321                 123467899999999999999955


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      + + ++++|+||||||+... .++.+.+.++
T Consensus        66 ~-~-~~~id~lv~nAg~~~~-~~~~~~~~~~   93 (244)
T 4e4y_A           66 I-K-NVSFDGIFLNAGILIK-GSIFDIDIES   93 (244)
T ss_dssp             T-T-TCCEEEEEECCCCCCC-BCTTTSCHHH
T ss_pred             H-H-hCCCCEEEECCccCCC-CCcccCCHHH
Confidence            5 3 7799999999999765 5677766554

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.64  E-value=4.7e-16  Score=123.22  Aligned_cols=103  Identities=18%  Similarity=0.287  Sum_probs=83.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .++++|||||++|||..++++|+++|+. |++++|+......+.+..+++..    .+.++.++.||++|.+++..+++.
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~----~g~~v~~~~~Dv~d~~~v~~~~~~  300 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEA----LGARTTVAACDVTDRESVRELLGG  300 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHH----TTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHh----cCCEEEEEEeCCCCHHHHHHHHHH
Confidence            5789999999999999999999999996 88999975433344555555655    466788999999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      + ..++++|+||||||+... ..+.+.+.+
T Consensus       301 i-~~~g~ld~VIh~AG~~~~-~~l~~~~~~  328 (486)
T 2fr1_A          301 I-GDDVPLSAVFHAAATLDD-GTVDTLTGE  328 (486)
T ss_dssp             S-CTTSCEEEEEECCCCCCC-CCGGGCCHH
T ss_pred             H-HhcCCCcEEEECCccCCC-CccccCCHH
Confidence            8 567899999999999765 566665544

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.62  E-value=4.1e-15  Score=106.92  Aligned_cols=85  Identities=24%  Similarity=0.344  Sum_probs=72.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +|++||||+++|||++++++|+++|++|++++|+..                   ...+.++.+|+++.++++++++++ 
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-------------------~~~~~~~~~D~~~~~~~~~~~~~~-   61 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-------------------GEDLIYVEGDVTREEDVRRAVARA-   61 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-------------------SSSSEEEECCTTCHHHHHHHHHHH-
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-------------------ccceEEEeCCCCCHHHHHHHHHHH-
Confidence            678999999999999999999999999999998742                   112478899999999999999999 


Q ss_pred             HhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          120 NAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      +.++++|+||||||+... ..+.+.+
T Consensus        62 ~~~~~~d~li~~ag~~~~-~~~~~~~   86 (242)
T 1uay_A           62 QEEAPLFAVVSAAGVGLA-EKILGKE   86 (242)
T ss_dssp             HHHSCEEEEEECCCCCCC-CCSBCSS
T ss_pred             HhhCCceEEEEcccccCc-ccccccc
Confidence            888999999999998765 4555544

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.61  E-value=2.5e-15  Score=137.06  Aligned_cols=93  Identities=22%  Similarity=0.205  Sum_probs=77.1

Q ss_pred             CCCCEEEEecCCCh-HHHHHHHHHHHcCCcEEEEecCCCCh--HHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           38 LRGMVALVTGGDSG-IGRAVCHCFAQEGATVAFTYVKPQED--KDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        38 ~~~~~~litG~s~g-ig~~~a~~L~~~g~~Vi~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      ++||++|||||++| ||+++|+.|++.|++|++++|+....  ..+++..+++..    .+..+.++.+|+++.++++++
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~----~G~~~~~v~~Dvtd~~~v~~l 2209 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHAR----FDATLWVVPANMASYSDIDKL 2209 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCC----TTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhh----cCCeEEEEEecCCCHHHHHHH
Confidence            78999999999999 99999999999999999999974321  012333333322    455678899999999999999


Q ss_pred             HHHHHH----hcCCccEEEeCCcC
Q 044851          115 VDEVVN----AYDRIDILVNNAAE  134 (149)
Q Consensus       115 ~~~~~~----~~g~id~li~~ag~  134 (149)
                      ++++.+    .+|++|+||||||+
T Consensus      2210 v~~i~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D         2210 VEWVGTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp             HHHHTSCCEEEESSSEEEECCCCC
T ss_pred             HHHHHhhhhhhcCCCCEEEECCCc
Confidence            999998    89999999999998

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.61  E-value=6.1e-16  Score=110.67  Aligned_cols=81  Identities=21%  Similarity=0.312  Sum_probs=67.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++||||+++|||+++|++|++.|++|++++|+.                   .        +|++|.++++++++
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~-------------------~--------~D~~~~~~v~~~~~   55 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQT-------------------G--------LDISDEKSVYHYFE   55 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGG-------------------T--------CCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCc-------------------c--------cCCCCHHHHHHHHH
Confidence            36789999999999999999999999999999998851                   1        79999999998887


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++    +++|+||||||+.....++.+.+.++
T Consensus        56 ~~----g~id~lv~nAg~~~~~~~~~~~~~~~   83 (223)
T 3uce_A           56 TI----GAFDHLIVTAGSYAPAGKVVDVEVTQ   83 (223)
T ss_dssp             HH----CSEEEEEECCCCCCCCSCTTTSCHHH
T ss_pred             Hh----CCCCEEEECCCCCCCCCCcccCCHHH
Confidence            65    88999999999874446777766544

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.61  E-value=3.2e-15  Score=131.39  Aligned_cols=106  Identities=22%  Similarity=0.332  Sum_probs=82.7

Q ss_pred             CCCCCEEEEecCCCh-HHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           37 KLRGMVALVTGGDSG-IGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        37 ~~~~~~~litG~s~g-ig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      .+.+|++|||||++| ||.++|++|++.|++|++++++.  ...+.+..+++.......+.++.++.||++|.+++..++
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~--~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv  726 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRF--SRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALV  726 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSC--CHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCC--hHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHH
Confidence            478999999999998 99999999999999999986432  223333333332211113556788999999999999999


Q ss_pred             HHHHHh---cC-CccEEEeCCcCCCCCC-CCCCCC
Q 044851          116 DEVVNA---YD-RIDILVNNAAEQYECG-SVEDID  145 (149)
Q Consensus       116 ~~~~~~---~g-~id~li~~ag~~~~~~-~~~~~s  145 (149)
                      +++.+.   +| +||+||||||+... . ++.+++
T Consensus       727 ~~i~~~~~~~G~~IDiLVnNAGi~~~-~~~l~d~t  760 (1878)
T 2uv9_A          727 NYIYDTKNGLGWDLDYVVPFAAIPEN-GREIDSID  760 (1878)
T ss_dssp             HHHHCSSSSCCCCCSEEEECCCCCCT-TCCTTCCC
T ss_pred             HHHHHhhcccCCCCcEEEeCcccccC-CCChhhcC
Confidence            999988   88 99999999998765 4 677766

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.60  E-value=3.5e-15  Score=131.33  Aligned_cols=105  Identities=20%  Similarity=0.327  Sum_probs=82.6

Q ss_pred             CCCCCEEEEecCCCh-HHHHHHHHHHHcCCcEEEEe-cCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRGMVALVTGGDSG-IGRAVCHCFAQEGATVAFTY-VKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~s~g-ig~~~a~~L~~~g~~Vi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .+.+|++|||||++| ||+++|++|++.|++|++++ |+   ...+.+..+++.......+..+.++.||++|.++++.+
T Consensus       672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~---~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~al  748 (1887)
T 2uv8_A          672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRF---SKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  748 (1887)
T ss_dssp             CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSC---CHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCC---HHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHH
Confidence            478999999999998 99999999999999999885 54   23333444444322111345678899999999999999


Q ss_pred             HHHHHHh-----cC-CccEEEeCCcCCCCCC-CCCCCC
Q 044851          115 VDEVVNA-----YD-RIDILVNNAAEQYECG-SVEDID  145 (149)
Q Consensus       115 ~~~~~~~-----~g-~id~li~~ag~~~~~~-~~~~~s  145 (149)
                      ++++.+.     +| ++|+||||||+... . ++.+++
T Consensus       749 v~~i~~~~~~~G~G~~LDiLVNNAGi~~~-~~~l~d~t  785 (1887)
T 2uv8_A          749 IEFIYDTEKNGGLGWDLDAIIPFAAIPEQ-GIELEHID  785 (1887)
T ss_dssp             HHHHHSCTTTTSCCCCCSEEEECCCCCCC-SBCGGGCC
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcCCC-CCChhhCC
Confidence            9999988     66 99999999999765 4 676665

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.59  E-value=4.4e-15  Score=118.26  Aligned_cols=99  Identities=21%  Similarity=0.277  Sum_probs=79.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .++++|||||++|||..++++|++.|+. |++++|+......+.+..+++..    .+.++.++.||++|.+++..+++.
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~----~g~~v~~~~~Dvtd~~~v~~~~~~  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRG----HGCEVVHAACDVAERDALAALVTA  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHT----TTCEEEEEECCSSCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHh----cCCEEEEEEeCCCCHHHHHHHHhc
Confidence            5689999999999999999999999995 88999975433344555566654    466788999999999999988876


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                           +++|+||||||+... ..+.+.+.+
T Consensus       334 -----~~ld~VVh~AGv~~~-~~~~~~~~~  357 (511)
T 2z5l_A          334 -----YPPNAVFHTAGILDD-AVIDTLSPE  357 (511)
T ss_dssp             -----SCCSEEEECCCCCCC-BCGGGCCHH
T ss_pred             -----CCCcEEEECCcccCC-cccccCCHH
Confidence                 689999999999765 556555543

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.59  E-value=1.4e-15  Score=110.83  Aligned_cols=95  Identities=18%  Similarity=0.212  Sum_probs=71.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      |++||||+++|||++++++|++.|++|++++|+....+.+.   + +..    .+.++.++     |.++++.+++++.+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~-l~~----~~~~~~~~-----d~~~v~~~~~~~~~   68 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE---A-FAE----TYPQLKPM-----SEQEPAELIEAVTS   68 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHH---H-HHH----HCTTSEEC-----CCCSHHHHHHHHHH
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---H-HHh----cCCcEEEE-----CHHHHHHHHHHHHH
Confidence            57999999999999999999999999999999754333322   2 332    22334333     66788899999999


Q ss_pred             hcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          121 AYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       121 ~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      .++++|+||||||+.....++.+.+.++
T Consensus        69 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~   96 (254)
T 1zmt_A           69 AYGQVDVLVSNDIFAPEFQPIDKYAVED   96 (254)
T ss_dssp             HHSCCCEEEEECCCCCCCCCGGGSCHHH
T ss_pred             HhCCCCEEEECCCcCCCCCChhhCCHHH
Confidence            9999999999999872225666665543

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.59  E-value=7.1e-15  Score=133.46  Aligned_cols=105  Identities=12%  Similarity=0.156  Sum_probs=78.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .+|++|||||++|||+++|++|+++|++ |++++|+....+...+.++++..    .+.++.++.||+++.+++++++++
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~----~g~~v~~~~~Dvsd~~~v~~~~~~ 1958 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRR----QGVQVLVSTSNASSLDGARSLITE 1958 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHH----TTCEEEEECCCSSSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHh----CCCEEEEEecCCCCHHHHHHHHHH
Confidence            6789999999999999999999999998 88888886555555556666655    456788899999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      +. .+++||+||||||+... .++.+++.++|
T Consensus      1959 ~~-~~g~id~lVnnAgv~~~-~~~~~~t~e~~ 1988 (2512)
T 2vz8_A         1959 AT-QLGPVGGVFNLAMVLRD-AVLENQTPEFF 1988 (2512)
T ss_dssp             HH-HHSCEEEEEECCCC---------------
T ss_pred             HH-hcCCCcEEEECCCcCCC-CchhhCCHHHH
Confidence            86 47899999999999765 67888887765

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.58  E-value=1.3e-16  Score=120.51  Aligned_cols=109  Identities=13%  Similarity=0.188  Sum_probs=76.0

Q ss_pred             CCCEEEEecCCC--hHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHH---Hhcc---CCCCCCceEEEecCCCh--
Q 044851           39 RGMVALVTGGDS--GIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEML---REAK---TPDAKDPMAISADLGFD--  108 (149)
Q Consensus        39 ~~~~~litG~s~--gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~Dv~~~--  108 (149)
                      ++|++||||+++  |||+++|++|++.|++|+++++++.. .-+....+..   ....   ......+.++.+|+++.  
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~-~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   79 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVY-NIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTA   79 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHH-HHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccc-cccccchHHHHHHHHHHHhhcccccccccccccccccch
Confidence            368999999975  99999999999999999988875200 0000000000   0000   00112356788899888  


Q ss_pred             H------------------HHHHHHHHHHHhcCCccEEEeCCcCCC-CCCCCCCCCCCC
Q 044851          109 E------------------NCKRVVDEVVNAYDRIDILVNNAAEQY-ECGSVEDIDESR  148 (149)
Q Consensus       109 ~------------------~v~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~s~~~  148 (149)
                      +                  ++..+++++.++++++|+||||||+.. ...++.+.+.++
T Consensus        80 ~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~  138 (329)
T 3lt0_A           80 NDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKG  138 (329)
T ss_dssp             GGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHH
T ss_pred             hhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHH
Confidence            7                  999999999999999999999999853 235677766554

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.58  E-value=2.4e-15  Score=129.68  Aligned_cols=105  Identities=19%  Similarity=0.314  Sum_probs=81.4

Q ss_pred             CCCCCEEEEecCCCh-HHHHHHHHHHHcCCcEEEE-ecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRGMVALVTGGDSG-IGRAVCHCFAQEGATVAFT-YVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~s~g-ig~~~a~~L~~~g~~Vi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .+++|++|||||++| ||+++|++|++.|++|+++ .|+.....   +..+++.......+..+.++.+|++|.++++++
T Consensus       473 sL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~le---e~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaL  549 (1688)
T 2pff_A          473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVT---DYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  549 (1688)
T ss_dssp             CCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTT---THHHHTTTTTCCTTCEEEEEECCSSSTTHHHHH
T ss_pred             ccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHH---HHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHH
Confidence            478999999999998 9999999999999999988 45533222   223333221111245678899999999999999


Q ss_pred             HHHHHHh-----cC-CccEEEeCCcCCCCCC-CCCCCC
Q 044851          115 VDEVVNA-----YD-RIDILVNNAAEQYECG-SVEDID  145 (149)
Q Consensus       115 ~~~~~~~-----~g-~id~li~~ag~~~~~~-~~~~~s  145 (149)
                      ++++.+.     +| ++|+||||||+... . ++.+++
T Consensus       550 Ve~I~e~~~~~GfG~~IDILVNNAGI~~~-g~~l~dlt  586 (1688)
T 2pff_A          550 IEFIYDTEKNGGLGWDLDAIIPFAAIPEQ-GIELEHID  586 (1688)
T ss_dssp             HHHHHSCTTSSSCCCCCCEEECCCCCCCC-SBCSSSCT
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcCCC-CCChhhCC
Confidence            9999988     77 89999999998765 4 677665

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.58  E-value=1.9e-14  Score=110.25  Aligned_cols=95  Identities=20%  Similarity=0.117  Sum_probs=77.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHH-HcCCcEEEEecCCCChHH---------HHHHHHHHHhccCCCCCCceEEEecCCC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFA-QEGATVAFTYVKPQEDKD---------AKETLEMLREAKTPDAKDPMAISADLGF  107 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~-~~g~~Vi~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~  107 (149)
                      ..+|++||||+++|||++++..|+ ..|+.++++.+.....++         .....+.+.+    .+...+.+.||+++
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~----~G~~a~~i~~Dv~d  123 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKR----EGLYSVTIDGDAFS  123 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH----HTCCEEEEESCTTS
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHH----cCCCceeEeCCCCC
Confidence            457999999999999999999998 679998888776432221         2223334444    57788999999999


Q ss_pred             hHHHHHHHHHHHHhcCCccEEEeCCcCCC
Q 044851          108 DENCKRVVDEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       108 ~~~v~~~~~~~~~~~g~id~li~~ag~~~  136 (149)
                      .++++++++++.+++|+||+||||+|...
T Consensus       124 ~e~i~~vi~~i~~~~G~IDiLVhS~A~~~  152 (401)
T 4ggo_A          124 DEIKAQVIEEAKKKGIKFDLIVYSLASPV  152 (401)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEECCCCSE
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEeccccc
Confidence            99999999999999999999999999753

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.54  E-value=4e-15  Score=111.65  Aligned_cols=111  Identities=24%  Similarity=0.245  Sum_probs=72.8

Q ss_pred             CCCCCEEEEecC--CChHHHHHHHHHHHcCCcEEEEecCCCChH---HHH-HHHHHHHhccCCCC--CCceEEEec----
Q 044851           37 KLRGMVALVTGG--DSGIGRAVCHCFAQEGATVAFTYVKPQEDK---DAK-ETLEMLREAKTPDA--KDPMAISAD----  104 (149)
Q Consensus        37 ~~~~~~~litG~--s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~---~~~-~~~~~~~~~~~~~~--~~~~~~~~D----  104 (149)
                      .+++|++||||+  ++|||+++|++|++.|++|++++|++....   ... ...+++.. .....  ....++.+|    
T Consensus         6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~   84 (315)
T 2o2s_A            6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRK-LPDGSLIEFAGVYPLDAAFD   84 (315)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHB-CTTSCBCCCSCEEECCTTCS
T ss_pred             cCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhh-hhcccccccccccccccccc
Confidence            478999999999  899999999999999999999987420000   000 01111111 00011  012344443    


Q ss_pred             --------CC--------ChHHHHHHHHHHHHhcCCccEEEeCCcCCC-CCCCCCCCCCCC
Q 044851          105 --------LG--------FDENCKRVVDEVVNAYDRIDILVNNAAEQY-ECGSVEDIDESR  148 (149)
Q Consensus       105 --------v~--------~~~~v~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~s~~~  148 (149)
                              ++        |.++++.+++++.+.+|++|+||||||+.. ...++.+.+.++
T Consensus        85 ~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~  145 (315)
T 2o2s_A           85 KPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKG  145 (315)
T ss_dssp             STTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHH
T ss_pred             ccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHH
Confidence                    33        356899999999999999999999999764 125666665543

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.54  E-value=8.5e-16  Score=111.29  Aligned_cols=95  Identities=18%  Similarity=0.199  Sum_probs=61.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||+++|++|++ |+.|++++|+   ...+.+.    .     ....+.++.+|+++..+ ...+.
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~---~~~~~~~----~-----~~~~~~~~~~D~~~~~~-~~~~~   67 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRN---PEHLAAL----A-----EIEGVEPIESDIVKEVL-EEGGV   67 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESC---HHHHHHH----H-----TSTTEEEEECCHHHHHH-TSSSC
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCC---HHHHHHH----H-----hhcCCcceecccchHHH-HHHHH
Confidence            36789999999999999999999988 8899999986   2222222    1     12346788899988766 44445


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      +..+.++++|+||||||+... .++.+.+.
T Consensus        68 ~~~~~~~~id~lv~~Ag~~~~-~~~~~~~~   96 (245)
T 3e9n_A           68 DKLKNLDHVDTLVHAAAVARD-TTIEAGSV   96 (245)
T ss_dssp             GGGTTCSCCSEEEECC-----------CHH
T ss_pred             HHHHhcCCCCEEEECCCcCCC-CchhhCCH
Confidence            555678899999999999765 55555543

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.54  E-value=7.9e-15  Score=110.13  Aligned_cols=108  Identities=23%  Similarity=0.259  Sum_probs=70.1

Q ss_pred             CCCCCEEEEecC--CChHHHHHHHHHHHcCCcEEEEecCC--------CChHHHH-----------HHHHHHHhccCCCC
Q 044851           37 KLRGMVALVTGG--DSGIGRAVCHCFAQEGATVAFTYVKP--------QEDKDAK-----------ETLEMLREAKTPDA   95 (149)
Q Consensus        37 ~~~~~~~litG~--s~gig~~~a~~L~~~g~~Vi~~~~~~--------~~~~~~~-----------~~~~~~~~~~~~~~   95 (149)
                      .+++|++||||+  ++|||+++|++|++.|++|++++|++        .....+.           +..+++..    .+
T Consensus         6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~   81 (319)
T 2ptg_A            6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAE----KP   81 (319)
T ss_dssp             CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC---------------------------------
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhh----cc
Confidence            478999999999  89999999999999999999998641        0001111           11112211    11


Q ss_pred             C---CceEEEec------------CCC--------hHHHHHHHHHHHHhcCCccEEEeCCcCCC-CCCCCCCCCCCC
Q 044851           96 K---DPMAISAD------------LGF--------DENCKRVVDEVVNAYDRIDILVNNAAEQY-ECGSVEDIDESR  148 (149)
Q Consensus        96 ~---~~~~~~~D------------v~~--------~~~v~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~s~~~  148 (149)
                      .   ...++.+|            +++        .++++.+++++.++++++|+||||||+.. ...++.+.+.++
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~  158 (319)
T 2ptg_A           82 VDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKG  158 (319)
T ss_dssp             ---CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHH
T ss_pred             ccccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHH
Confidence            0   12344433            333        45899999999999999999999999763 225666666543

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.53  E-value=5.2e-15  Score=107.19  Aligned_cols=93  Identities=20%  Similarity=0.171  Sum_probs=69.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEE-e--cCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFT-Y--VKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +|++||||+++|||++++++|++.|++|+++ +  |+   .+.+.+..+++ .            .+|+.|.++++.+++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~---~~~~~~~~~~~-~------------~~~~~~~~~v~~~~~   64 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFAD---AAERQRFESEN-P------------GTIALAEQKPERLVD   64 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGS---HHHHHHHHHHS-T------------TEEECCCCCGGGHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCC---HHHHHHHHHHh-C------------CCcccCHHHHHHHHH
Confidence            4789999999999999999999999999999 5  86   33333332221 0            123347778889999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCC--CCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYEC--GSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~--~~~~~~s~~~  148 (149)
                      ++.+.++++|+||||||+....  .++.+.+.++
T Consensus        65 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~   98 (244)
T 1zmo_A           65 ATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEAD   98 (244)
T ss_dssp             HHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHH
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHH
Confidence            9999999999999999986531  4566665443

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.52  E-value=1.9e-14  Score=104.60  Aligned_cols=88  Identities=28%  Similarity=0.448  Sum_probs=67.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|++|||||++|||++++++|++.|++|++++|+.   +    ..+   .    .+ .+.++ +|+  .++++.+++
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~---~----~~~---~----~~-~~~~~-~D~--~~~~~~~~~   77 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE---E----LLK---R----SG-HRYVV-CDL--RKDLDLLFE   77 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH---H----HHH---H----TC-SEEEE-CCT--TTCHHHHHH
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH---H----HHH---h----hC-CeEEE-eeH--HHHHHHHHH
Confidence            57899999999999999999999999999999999962   1    111   1    12 35566 999  456777766


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      ++    .++|+||||||+... .++.+.+.+
T Consensus        78 ~~----~~iD~lv~~Ag~~~~-~~~~~~~~~  103 (249)
T 1o5i_A           78 KV----KEVDILVLNAGGPKA-GFFDELTNE  103 (249)
T ss_dssp             HS----CCCSEEEECCCCCCC-BCGGGCCHH
T ss_pred             Hh----cCCCEEEECCCCCCC-CChhhCCHH
Confidence            65    379999999998654 566665544

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.50  E-value=3.1e-14  Score=100.10  Aligned_cols=89  Identities=22%  Similarity=0.328  Sum_probs=67.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      |+++|||++++||++++++|+++  +|++++|+.   ..+.+..+++      ..   .++.+|++|.+++..++++   
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~---~~~~~~~~~~------~~---~~~~~D~~~~~~~~~~~~~---   63 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRA---GALAELAREV------GA---RALPADLADELEAKALLEE---   63 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCH---HHHHHHHHHH------TC---EECCCCTTSHHHHHHHHHH---
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCH---HHHHHHHHhc------cC---cEEEeeCCCHHHHHHHHHh---
Confidence            57999999999999999999998  999999863   3333332222      11   6788999999999998887   


Q ss_pred             hcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          121 AYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       121 ~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                       ++++|+||||||.... .++.+.+.++
T Consensus        64 -~~~id~vi~~ag~~~~-~~~~~~~~~~   89 (207)
T 2yut_A           64 -AGPLDLLVHAVGKAGR-ASVREAGRDL   89 (207)
T ss_dssp             -HCSEEEEEECCCCCCC-BCSCC---CH
T ss_pred             -cCCCCEEEECCCcCCC-CChhhCCHHH
Confidence             6789999999998754 5666655543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.48  E-value=1e-13  Score=97.21  Aligned_cols=75  Identities=16%  Similarity=0.266  Sum_probs=63.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      +++||||+++||.+++++|+ +|++|++++|+..                        ++.+|+++.++++++++++   
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------------------~~~~D~~~~~~~~~~~~~~---   56 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------------------DVTVDITNIDSIKKMYEQV---   56 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------------------SEECCTTCHHHHHHHHHHH---
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------------------ceeeecCCHHHHHHHHHHh---
Confidence            69999999999999999999 9999999998621                        3679999999999888765   


Q ss_pred             cCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          122 YDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       122 ~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                       +++|+||||||.... .++.+.+.
T Consensus        57 -~~~d~vi~~ag~~~~-~~~~~~~~   79 (202)
T 3d7l_A           57 -GKVDAIVSATGSATF-SPLTELTP   79 (202)
T ss_dssp             -CCEEEEEECCCCCCC-CCGGGCCH
T ss_pred             -CCCCEEEECCCCCCC-CChhhCCH
Confidence             789999999998654 45555543

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.47  E-value=4.2e-13  Score=99.65  Aligned_cols=111  Identities=20%  Similarity=0.254  Sum_probs=70.9

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCcEEEEecCCCChH---HH-HHHHHHHHhccCCCC-CC-ceEEEec----
Q 044851           37 KLRGMVALVTGGD--SGIGRAVCHCFAQEGATVAFTYVKPQEDK---DA-KETLEMLREAKTPDA-KD-PMAISAD----  104 (149)
Q Consensus        37 ~~~~~~~litG~s--~gig~~~a~~L~~~g~~Vi~~~~~~~~~~---~~-~~~~~~~~~~~~~~~-~~-~~~~~~D----  104 (149)
                      .+++|++|||||+  +|||+++|++|++.|++|++++|+.....   .. .+..+++.. ..... .. ...+.+|    
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRV-LPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGB-CTTSSBCCEEEEEEECTTCC
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhh-hccccccccccccccceecc
Confidence            4789999999999  99999999999999999999986411000   00 000001100 00000 00 1233333    


Q ss_pred             ----CC----C--------hHHHHHHHHHHHHhcCCccEEEeCCcCCC-CCCCCCCCCCCC
Q 044851          105 ----LG----F--------DENCKRVVDEVVNAYDRIDILVNNAAEQY-ECGSVEDIDESR  148 (149)
Q Consensus       105 ----v~----~--------~~~v~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~s~~~  148 (149)
                          +.    +        .++++.+++++.+.++++|+||||||+.. ...++.+.+.++
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~  144 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKG  144 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHH
T ss_pred             chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHH
Confidence                32    2        66899999999999999999999999753 124566665443

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.42  E-value=3.1e-13  Score=98.97  Aligned_cols=75  Identities=17%  Similarity=0.205  Sum_probs=63.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      ++|++|||||+++||.+++++|++.|++|++++|+....                ....+.++.+|++|.+++..+++  
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~----------------~~~~~~~~~~Dl~d~~~~~~~~~--   63 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDP----------------AGPNEECVQCDLADANAVNAMVA--   63 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCC----------------CCTTEEEEECCTTCHHHHHHHHT--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccc----------------cCCCCEEEEcCCCCHHHHHHHHc--
Confidence            457899999999999999999999999999999974322                23457889999999998888776  


Q ss_pred             HHhcCCccEEEeCCcCCC
Q 044851          119 VNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~  136 (149)
                           ++|+||||||+..
T Consensus        64 -----~~D~vi~~Ag~~~   76 (267)
T 3rft_A           64 -----GCDGIVHLGGISV   76 (267)
T ss_dssp             -----TCSEEEECCSCCS
T ss_pred             -----CCCEEEECCCCcC
Confidence                 5899999999853

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.42  E-value=1.7e-12  Score=97.49  Aligned_cols=87  Identities=22%  Similarity=0.239  Sum_probs=70.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .++++|||||+++||.+++++|++.|++|++++|+.....+..+.+...      .+..+.++.+|++|.+++.++++. 
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~~-   76 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKI------TGKTPAFHETDVSDERALARIFDA-   76 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHH------HSCCCEEECCCTTCHHHHHHHHHH-
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhh------cCCCceEEEeecCCHHHHHHHHhc-
Confidence            4578999999999999999999999999999999865554443333322      134578899999999999888876 


Q ss_pred             HHhcCCccEEEeCCcCCC
Q 044851          119 VNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~  136 (149)
                          +++|+||||||...
T Consensus        77 ----~~~d~vih~A~~~~   90 (341)
T 3enk_A           77 ----HPITAAIHFAALKA   90 (341)
T ss_dssp             ----SCCCEEEECCCCCC
T ss_pred             ----cCCcEEEECccccc
Confidence                37999999999854

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.40  E-value=3.7e-13  Score=96.58  Aligned_cols=79  Identities=23%  Similarity=0.331  Sum_probs=59.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCc-eEEEecCCChHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDP-MAISADLGFDENCKRV  114 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dv~~~~~v~~~  114 (149)
                      ..+++++++||||+++||.+++++|++.|++|++++|+...   +..    +..      ..+ .++.+|++        
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~---~~~----~~~------~~~~~~~~~Dl~--------   75 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQ---GPE----LRE------RGASDIVVANLE--------   75 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGG---HHH----HHH------TTCSEEEECCTT--------
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHH---HHH----HHh------CCCceEEEcccH--------
Confidence            45789999999999999999999999999999999997432   221    221      246 78899998        


Q ss_pred             HHHHHHhcCCccEEEeCCcCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~  136 (149)
                       +.+.+.++++|+||||||...
T Consensus        76 -~~~~~~~~~~D~vi~~ag~~~   96 (236)
T 3e8x_A           76 -EDFSHAFASIDAVVFAAGSGP   96 (236)
T ss_dssp             -SCCGGGGTTCSEEEECCCCCT
T ss_pred             -HHHHHHHcCCCEEEECCCCCC
Confidence             233445568999999999754

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.36  E-value=4e-13  Score=97.49  Aligned_cols=73  Identities=19%  Similarity=0.202  Sum_probs=59.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      |++||||+++|||++++++|++.|++|++++|+.....               .    . +.+|+++.++++++++++  
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------------~----~-~~~Dl~~~~~v~~~~~~~--   59 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI---------------A----D-LSTAEGRKQAIADVLAKC--   59 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE---------------C----C-TTSHHHHHHHHHHHHTTC--
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc---------------c----c-cccCCCCHHHHHHHHHHh--
Confidence            57999999999999999999999999999999743211               0    1 558999998888877643  


Q ss_pred             hcCCccEEEeCCcCCC
Q 044851          121 AYDRIDILVNNAAEQY  136 (149)
Q Consensus       121 ~~g~id~li~~ag~~~  136 (149)
                       .+++|+||||||+..
T Consensus        60 -~~~id~lv~~Ag~~~   74 (257)
T 1fjh_A           60 -SKGMDGLVLCAGLGP   74 (257)
T ss_dssp             -TTCCSEEEECCCCCT
T ss_pred             -CCCCCEEEECCCCCC
Confidence             378999999999865

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.36  E-value=4.2e-12  Score=95.23  Aligned_cols=86  Identities=26%  Similarity=0.185  Sum_probs=66.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      ++++++||||+|+||.+++++|++.|++|++++|+......  ..++.+.     ....+.++.+|++|.+++..+++.+
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~~   74 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELG-----IENDVKIIHMDLLEFSNIIRTIEKV   74 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTT-----CTTTEEECCCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhcc-----ccCceeEEECCCCCHHHHHHHHHhc
Confidence            56889999999999999999999999999999997543221  1111111     1235778889999999998888776


Q ss_pred             HHhcCCccEEEeCCcCCC
Q 044851          119 VNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~  136 (149)
                           ++|+||||||...
T Consensus        75 -----~~d~vih~A~~~~   87 (345)
T 2z1m_A           75 -----QPDEVYNLAAQSF   87 (345)
T ss_dssp             -----CCSEEEECCCCCC
T ss_pred             -----CCCEEEECCCCcc
Confidence                 6999999999753

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.34  E-value=9.5e-12  Score=93.41  Aligned_cols=84  Identities=17%  Similarity=0.193  Sum_probs=67.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .++++++|||||+++||.+++++|++.|++|++++|+.....+.   .    .    .-..+.++.+|++|.+++..+++
T Consensus        17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~----~----~l~~v~~~~~Dl~d~~~~~~~~~   85 (330)
T 2pzm_A           17 RGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREV---L----P----PVAGLSVIEGSVTDAGLLERAFD   85 (330)
T ss_dssp             TTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGG---S----C----SCTTEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhh---h----h----ccCCceEEEeeCCCHHHHHHHHh
Confidence            47788999999999999999999999999999999964322110   0    0    11356788999999999988887


Q ss_pred             HHHHhcCCccEEEeCCcCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~  136 (149)
                      ++     ++|+||||||...
T Consensus        86 ~~-----~~D~vih~A~~~~  100 (330)
T 2pzm_A           86 SF-----KPTHVVHSAAAYK  100 (330)
T ss_dssp             HH-----CCSEEEECCCCCS
T ss_pred             hc-----CCCEEEECCccCC
Confidence            65     6999999999864

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.33  E-value=7.4e-12  Score=94.73  Aligned_cols=85  Identities=21%  Similarity=0.136  Sum_probs=68.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +.++++|||||+|+||..++++|++.|++|++++|+......+...+   .     ....+.++.+|+++.+++..+++.
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~-----~~~~~~~~~~Dl~d~~~~~~~~~~   78 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETA---R-----VADGMQSEIGDIRDQNKLLESIRE   78 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHT---T-----TTTTSEEEECCTTCHHHHHHHHHH
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhh---c-----cCCceEEEEccccCHHHHHHHHHh
Confidence            46788999999999999999999999999999999765433322211   1     234678899999999998888877


Q ss_pred             HHHhcCCccEEEeCCcCC
Q 044851          118 VVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~  135 (149)
                      .     ++|+||||||..
T Consensus        79 ~-----~~d~vih~A~~~   91 (357)
T 1rkx_A           79 F-----QPEIVFHMAAQP   91 (357)
T ss_dssp             H-----CCSEEEECCSCC
T ss_pred             c-----CCCEEEECCCCc
Confidence            6     699999999963

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.32  E-value=7.6e-12  Score=94.82  Aligned_cols=83  Identities=17%  Similarity=0.178  Sum_probs=65.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc-CC-cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQE-GA-TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~-g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +++|++|||||+|+||.+++++|++. |+ +|++++|+.   .......+.+      ....+.++.+|++|.+++..++
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~---~~~~~~~~~~------~~~~v~~~~~Dl~d~~~l~~~~   89 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDE---LKQSEMAMEF------NDPRMRFFIGDVRDLERLNYAL   89 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCH---HHHHHHHHHH------CCTTEEEEECCTTCHHHHHHHT
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECCh---hhHHHHHHHh------cCCCEEEEECCCCCHHHHHHHH
Confidence            67889999999999999999999999 98 899999863   2222222222      1245788999999998877665


Q ss_pred             HHHHHhcCCccEEEeCCcCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~  136 (149)
                      +       ++|+|||+||...
T Consensus        90 ~-------~~D~Vih~Aa~~~  103 (344)
T 2gn4_A           90 E-------GVDICIHAAALKH  103 (344)
T ss_dssp             T-------TCSEEEECCCCCC
T ss_pred             h-------cCCEEEECCCCCC
Confidence            4       5899999999754

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.31  E-value=6.5e-12  Score=93.12  Aligned_cols=84  Identities=19%  Similarity=0.198  Sum_probs=64.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|||+++|+|+++++.|++.|++|++++|+   .+.+.+..+++..    . ..+.++.+|+++.+++.++++
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~---~~~~~~l~~~~~~----~-~~~~~~~~D~~~~~~~~~~~~  187 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK---LDKAQAAADSVNK----R-FKVNVTAAETADDASRAEAVK  187 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHHHH----H-HTCCCEEEECCSHHHHHHHTT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC---HHHHHHHHHHHHh----c-CCcEEEEecCCCHHHHHHHHH
Confidence            3678999999999999999999999999999999986   3344444444432    1 124567899999887766554


Q ss_pred             HHHHhcCCccEEEeCCcCC
Q 044851          117 EVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~  135 (149)
                             .+|+||||+|+.
T Consensus       188 -------~~DvlVn~ag~g  199 (287)
T 1lu9_A          188 -------GAHFVFTAGAIG  199 (287)
T ss_dssp             -------TCSEEEECCCTT
T ss_pred             -------hCCEEEECCCcc
Confidence                   379999999864

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.31  E-value=1.6e-11  Score=87.24  Aligned_cols=77  Identities=9%  Similarity=0.062  Sum_probs=61.2

Q ss_pred             CEEEEecCCChHHHHHHHHHH-HcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFA-QEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~-~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      |+++||||+++||.++++.|+ +.|++|++++|+..  ..+.+    +..    ....+.++.+|++|.+++..+++   
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~--~~~~~----~~~----~~~~~~~~~~D~~d~~~~~~~~~---   72 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLK--TRIPP----EII----DHERVTVIEGSFQNPGXLEQAVT---   72 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHH--HHSCH----HHH----TSTTEEEEECCTTCHHHHHHHHT---
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCcc--ccchh----hcc----CCCceEEEECCCCCHHHHHHHHc---
Confidence            679999999999999999999 89999999999732  02111    111    24567889999999998887764   


Q ss_pred             HhcCCccEEEeCCcC
Q 044851          120 NAYDRIDILVNNAAE  134 (149)
Q Consensus       120 ~~~g~id~li~~ag~  134 (149)
                          .+|+||||+|.
T Consensus        73 ----~~d~vv~~ag~   83 (221)
T 3r6d_A           73 ----NAEVVFVGAME   83 (221)
T ss_dssp             ----TCSEEEESCCC
T ss_pred             ----CCCEEEEcCCC
Confidence                57999999986

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.29  E-value=7.9e-12  Score=94.88  Aligned_cols=94  Identities=20%  Similarity=0.165  Sum_probs=65.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHH--cCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQ--EGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~--~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .+.++++|||||+|+||.+++++|++  .|++|++++|+...........+.+..........+.++.+|+++.+++..+
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   86 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL   86 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh
Confidence            46788999999999999999999999  8999999998754111000000000000000234568899999999887776


Q ss_pred             HHHHHHhcCCccEEEeCCcCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~  136 (149)
                            ...++|+||||||...
T Consensus        87 ------~~~~~D~vih~A~~~~  102 (362)
T 3sxp_A           87 ------EKLHFDYLFHQAAVSD  102 (362)
T ss_dssp             ------TTSCCSEEEECCCCCG
T ss_pred             ------hccCCCEEEECCccCC
Confidence                  2357999999999654

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.29  E-value=1.8e-12  Score=93.10  Aligned_cols=78  Identities=10%  Similarity=0.104  Sum_probs=62.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC--cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +.+++++||||+++||.+++++|++.|+  +|++++|+.......             ....+.++.+|+++.+++..++
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~-------------~~~~~~~~~~D~~d~~~~~~~~   82 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-------------AYKNVNQEVVDFEKLDDYASAF   82 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-------------GGGGCEEEECCGGGGGGGGGGG
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccc-------------ccCCceEEecCcCCHHHHHHHh
Confidence            4678999999999999999999999999  999999975432211             0123678889999988877655


Q ss_pred             HHHHHhcCCccEEEeCCcCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~  135 (149)
                      +       ++|+||||||..
T Consensus        83 ~-------~~d~vi~~ag~~   95 (242)
T 2bka_A           83 Q-------GHDVGFCCLGTT   95 (242)
T ss_dssp             S-------SCSEEEECCCCC
T ss_pred             c-------CCCEEEECCCcc
Confidence            3       689999999975

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.28  E-value=4.1e-11  Score=90.18  Aligned_cols=86  Identities=14%  Similarity=0.071  Sum_probs=65.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCC------hHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQE------DKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKR  113 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  113 (149)
                      +++++||||+++||.+++++|++.|++|++++|+...      ..+..+.+...      .+..+.++.+|+++.+++..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~~D~~~~~~~~~   75 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL------TGRSVEFEEMDILDQGALQR   75 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH------HTCCCEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhc------cCCceEEEECCCCCHHHHHH
Confidence            4689999999999999999999999999999886432      22222222211      13457889999999998888


Q ss_pred             HHHHHHHhcCCccEEEeCCcCCC
Q 044851          114 VVDEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       114 ~~~~~~~~~g~id~li~~ag~~~  136 (149)
                      +++..     ++|+||||||...
T Consensus        76 ~~~~~-----~~d~vih~A~~~~   93 (348)
T 1ek6_A           76 LFKKY-----SFMAVIHFAGLKA   93 (348)
T ss_dssp             HHHHC-----CEEEEEECCSCCC
T ss_pred             HHHhc-----CCCEEEECCCCcC
Confidence            77653     6999999999753

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.28  E-value=5.8e-12  Score=90.53  Aligned_cols=76  Identities=17%  Similarity=0.167  Sum_probs=61.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-CcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEG-ATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      ..|++|||||+++||.++++.|++.| ++|++++|+......   .          ....+.++.+|++|.+++..+++ 
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~---~----------~~~~~~~~~~Dl~d~~~~~~~~~-   87 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHK---P----------YPTNSQIIMGDVLNHAALKQAMQ-   87 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS---S----------CCTTEEEEECCTTCHHHHHHHHT-
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc---c----------ccCCcEEEEecCCCHHHHHHHhc-
Confidence            34789999999999999999999999 899999997432111   0          23457889999999998887765 


Q ss_pred             HHHhcCCccEEEeCCcC
Q 044851          118 VVNAYDRIDILVNNAAE  134 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~  134 (149)
                            .+|+||||+|.
T Consensus        88 ------~~D~vv~~a~~   98 (236)
T 3qvo_A           88 ------GQDIVYANLTG   98 (236)
T ss_dssp             ------TCSEEEEECCS
T ss_pred             ------CCCEEEEcCCC
Confidence                  47999999986

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.28  E-value=2.3e-11  Score=92.34  Aligned_cols=90  Identities=20%  Similarity=0.139  Sum_probs=61.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      ++++||||+++||.+++++|++.|++|++++|+.....  .+.++.+..........+.++.+|+++.+++..+++..  
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--   77 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFN--TERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV--   77 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHHHHH--
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccc--hHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc--
Confidence            67999999999999999999999999999998743210  01111111100001245778889999999998888776  


Q ss_pred             hcCCccEEEeCCcCCCC
Q 044851          121 AYDRIDILVNNAAEQYE  137 (149)
Q Consensus       121 ~~g~id~li~~ag~~~~  137 (149)
                         ++|+||||||....
T Consensus        78 ---~~d~vih~A~~~~~   91 (372)
T 1db3_A           78 ---QPDEVYNLGAMSHV   91 (372)
T ss_dssp             ---CCSEEEECCCCCTT
T ss_pred             ---CCCEEEECCcccCc
Confidence               68999999997543

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.27  E-value=4.3e-11  Score=89.90  Aligned_cols=85  Identities=14%  Similarity=0.178  Sum_probs=64.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+++++||||+|+||.+++++|++.|++|++++|+.....+   .+   .     .-..+.++.+|+++.+++..+++
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~l---~-----~~~~~~~~~~Dl~d~~~~~~~~~   86 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRRE---HL---K-----DHPNLTFVEGSIADHALVNQLIG   86 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GS---C-----CCTTEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchh---hH---h-----hcCCceEEEEeCCCHHHHHHHHh
Confidence            4667899999999999999999999999999999987432211   00   0     11356788999999998888877


Q ss_pred             HHHHhcCCccEEEeCCcCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~  137 (149)
                      ..     ++|+||||||....
T Consensus        87 ~~-----~~D~vih~A~~~~~  102 (333)
T 2q1w_A           87 DL-----QPDAVVHTAASYKD  102 (333)
T ss_dssp             HH-----CCSEEEECCCCCSC
T ss_pred             cc-----CCcEEEECceecCC
Confidence            52     69999999998643

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.26  E-value=6.4e-11  Score=90.66  Aligned_cols=88  Identities=17%  Similarity=0.137  Sum_probs=64.8

Q ss_pred             CEEEEecCCChHHHHHHHHHH-HcCCcEEEEecCCCCh---------HHHHHHHHHHHhccCCC--CCC---ceEEEecC
Q 044851           41 MVALVTGGDSGIGRAVCHCFA-QEGATVAFTYVKPQED---------KDAKETLEMLREAKTPD--AKD---PMAISADL  105 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~-~~g~~Vi~~~~~~~~~---------~~~~~~~~~~~~~~~~~--~~~---~~~~~~Dv  105 (149)
                      +++|||||+++||.+++++|+ +.|++|++++|+....         ..+.+.++.+..    .  ...   +.++.+|+
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl   78 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDG----PKPPWADRYAALEVGDV   78 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCS----SCCTTTTCCCEEEESCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhc----cccccCCceEEEEECCC
Confidence            479999999999999999999 9999999999874431         222222222111    1  123   78899999


Q ss_pred             CChHHHHHHHHHHHHhcCCccEEEeCCcCCC
Q 044851          106 GFDENCKRVVDEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       106 ~~~~~v~~~~~~~~~~~g~id~li~~ag~~~  136 (149)
                      ++.+++..++++    ++++|+||||||...
T Consensus        79 ~d~~~~~~~~~~----~~~~d~vih~A~~~~  105 (397)
T 1gy8_A           79 RNEDFLNGVFTR----HGPIDAVVHMCAFLA  105 (397)
T ss_dssp             TCHHHHHHHHHH----SCCCCEEEECCCCCC
T ss_pred             CCHHHHHHHHHh----cCCCCEEEECCCccC
Confidence            999988777654    456999999999754

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.26  E-value=5.4e-12  Score=90.99  Aligned_cols=73  Identities=27%  Similarity=0.234  Sum_probs=60.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      |++|||||+++||.+++++|++.|++|++++|+.....               .     .+.+|+++.++++.+++++  
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------------~-----~~~~D~~~~~~~~~~~~~~--   59 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE---------------A-----DLSTPGGRETAVAAVLDRC--   59 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE---------------C-----CTTSHHHHHHHHHHHHHHH--
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc---------------c-----cccCCcccHHHHHHHHHHc--
Confidence            47999999999999999999999999999999743211               0     1458999988888888754  


Q ss_pred             hcCCccEEEeCCcCCC
Q 044851          121 AYDRIDILVNNAAEQY  136 (149)
Q Consensus       121 ~~g~id~li~~ag~~~  136 (149)
                       .+++|+||||||...
T Consensus        60 -~~~~d~vi~~Ag~~~   74 (255)
T 2dkn_A           60 -GGVLDGLVCCAGVGV   74 (255)
T ss_dssp             -TTCCSEEEECCCCCT
T ss_pred             -CCCccEEEECCCCCC
Confidence             368999999999864

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.26  E-value=1.3e-11  Score=92.50  Aligned_cols=86  Identities=14%  Similarity=0.043  Sum_probs=64.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEE-EecCCChHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI-SADLGFDENCKRVVD  116 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~  116 (149)
                      ++++++|||||+|+||.++++.|++.|++|++++|+..   ........+...   .+..+.++ .+|+++.+++..+++
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~   82 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSAS---KLANLQKRWDAK---YPGRFETAVVEDMLKQGAYDEVIK   82 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHH---HHHHHHHHHHHH---STTTEEEEECSCTTSTTTTTTTTT
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcc---cHHHHHHHhhcc---CCCceEEEEecCCcChHHHHHHHc
Confidence            57789999999999999999999999999999998632   222222222211   12456677 799999887766553


Q ss_pred             HHHHhcCCccEEEeCCcCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~  136 (149)
                             ++|+||||||...
T Consensus        83 -------~~d~vih~A~~~~   95 (342)
T 1y1p_A           83 -------GAAGVAHIASVVS   95 (342)
T ss_dssp             -------TCSEEEECCCCCS
T ss_pred             -------CCCEEEEeCCCCC
Confidence                   6899999999764

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.26  E-value=7.3e-11  Score=84.64  Aligned_cols=80  Identities=20%  Similarity=0.209  Sum_probs=61.1

Q ss_pred             CCCCCEEEEecC----------------CChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceE
Q 044851           37 KLRGMVALVTGG----------------DSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMA  100 (149)
Q Consensus        37 ~~~~~~~litG~----------------s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (149)
                      .+.||++|||||                ++++|+++|+.|++.|++|+++++... ..             .+.+    .
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-------------~~~g----~   66 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-------------TPPF----V   66 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-------------CCTT----E
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-------------cCCC----C
Confidence            378999999999                588999999999999999999887531 10             0011    2


Q ss_pred             EEecCCChHHHHHHHHHHHHhcCCccEEEeCCcCCCC
Q 044851          101 ISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       101 ~~~Dv~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~  137 (149)
                      -.+|+.+.   +.+++.+.+.++++|++|||||+...
T Consensus        67 ~~~dv~~~---~~~~~~v~~~~~~~Dili~~Aav~d~  100 (226)
T 1u7z_A           67 KRVDVMTA---LEMEAAVNASVQQQNIFIGCAAVADY  100 (226)
T ss_dssp             EEEECCSH---HHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             eEEccCcH---HHHHHHHHHhcCCCCEEEECCcccCC
Confidence            24677764   45677777888999999999998754

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.25  E-value=3.3e-11  Score=84.09  Aligned_cols=77  Identities=10%  Similarity=0.044  Sum_probs=61.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +++++|||++++||.+++++|++.|++|++++|+......       .      ....+.++.+|+++.+++.++++   
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-------~------~~~~~~~~~~D~~~~~~~~~~~~---   66 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-------E------GPRPAHVVVGDVLQAADVDKTVA---   66 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-------S------SCCCSEEEESCTTSHHHHHHHHT---
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc-------c------cCCceEEEEecCCCHHHHHHHHc---
Confidence            3689999999999999999999999999999997432110       0      13457889999999988777654   


Q ss_pred             HhcCCccEEEeCCcCCC
Q 044851          120 NAYDRIDILVNNAAEQY  136 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~  136 (149)
                          .+|+||||+|...
T Consensus        67 ----~~d~vi~~a~~~~   79 (206)
T 1hdo_A           67 ----GQDAVIVLLGTRN   79 (206)
T ss_dssp             ----TCSEEEECCCCTT
T ss_pred             ----CCCEEEECccCCC
Confidence                4799999999754

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.25  E-value=1.2e-10  Score=87.42  Aligned_cols=84  Identities=14%  Similarity=0.158  Sum_probs=64.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      +++|||||+|+||..++++|++.|++|++++|+.....  ......+..     ..++.++.+|+++.+++..+++..  
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~l~~-----~~~~~~~~~Dl~d~~~~~~~~~~~--   72 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGA--TDNLHWLSS-----LGNFEFVHGDIRNKNDVTRLITKY--   72 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTH--HHHHHHHHT-----TCCCEEEECCTTCHHHHHHHHHHH--
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCc--hhhhhhhcc-----CCceEEEEcCCCCHHHHHHHHhcc--
Confidence            46999999999999999999999999999988532221  112223322     235788899999999988888763  


Q ss_pred             hcCCccEEEeCCcCCC
Q 044851          121 AYDRIDILVNNAAEQY  136 (149)
Q Consensus       121 ~~g~id~li~~ag~~~  136 (149)
                         ++|+||||||...
T Consensus        73 ---~~d~vih~A~~~~   85 (347)
T 1orr_A           73 ---MPDSCFHLAGQVA   85 (347)
T ss_dssp             ---CCSEEEECCCCCC
T ss_pred             ---CCCEEEECCcccC
Confidence               6899999999753

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.25  E-value=7.3e-11  Score=89.08  Aligned_cols=86  Identities=15%  Similarity=0.197  Sum_probs=66.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      ..++++||||+|.||..+++.|++.|++|+++.|+........+.++.+..      ..+.++.+|++|.+++.+++++.
T Consensus         9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~------~~v~~~~~Dl~d~~~l~~~~~~~   82 (346)
T 3i6i_A            9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALED------KGAIIVYGLINEQEAMEKILKEH   82 (346)
T ss_dssp             --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHH------TTCEEEECCTTCHHHHHHHHHHT
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHh------CCcEEEEeecCCHHHHHHHHhhC
Confidence            345799999999999999999999999999999975333333333334432      35788999999999888887753


Q ss_pred             HHhcCCccEEEeCCcCC
Q 044851          119 VNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~  135 (149)
                           ++|+|||++|..
T Consensus        83 -----~~d~Vi~~a~~~   94 (346)
T 3i6i_A           83 -----EIDIVVSTVGGE   94 (346)
T ss_dssp             -----TCCEEEECCCGG
T ss_pred             -----CCCEEEECCchh
Confidence                 689999999873

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.23  E-value=4.5e-11  Score=85.81  Aligned_cols=78  Identities=14%  Similarity=0.060  Sum_probs=62.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc--CCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQE--GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +++++++||||+++||.+++++|++.  |++|++++|+.   ....    .       ....+.++.+|+++.+++.+++
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~---~~~~----~-------~~~~~~~~~~D~~d~~~~~~~~   67 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSA---QGKE----K-------IGGEADVFIGDITDADSINPAF   67 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCH---HHHH----H-------TTCCTTEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCC---Cchh----h-------cCCCeeEEEecCCCHHHHHHHH
Confidence            35678999999999999999999999  89999999862   2211    1       1234678899999998887776


Q ss_pred             HHHHHhcCCccEEEeCCcCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~  136 (149)
                      +       .+|+||||+|...
T Consensus        68 ~-------~~d~vi~~a~~~~   81 (253)
T 1xq6_A           68 Q-------GIDALVILTSAVP   81 (253)
T ss_dssp             T-------TCSEEEECCCCCC
T ss_pred             c-------CCCEEEEeccccc
Confidence            4       4899999999764

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.23  E-value=6.3e-11  Score=89.03  Aligned_cols=81  Identities=21%  Similarity=0.266  Sum_probs=64.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcC-------CcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEG-------ATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDE  109 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g-------~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~  109 (149)
                      .++++++|||||+++||.+++++|++.|       ++|++++|+......         .    ....+.++.+|+++.+
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~---------~----~~~~~~~~~~Dl~d~~   77 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA---------G----FSGAVDARAADLSAPG   77 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT---------T----CCSEEEEEECCTTSTT
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc---------c----cCCceeEEEcCCCCHH
Confidence            3678899999999999999999999999       789999987432211         0    2345678899999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEeCCcCCC
Q 044851          110 NCKRVVDEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       110 ~v~~~~~~~~~~~g~id~li~~ag~~~  136 (149)
                      ++..+++      +++|+||||||...
T Consensus        78 ~~~~~~~------~~~d~vih~A~~~~   98 (342)
T 2hrz_A           78 EAEKLVE------ARPDVIFHLAAIVS   98 (342)
T ss_dssp             HHHHHHH------TCCSEEEECCCCCH
T ss_pred             HHHHHHh------cCCCEEEECCccCc
Confidence            8877765      37999999999753

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.23  E-value=5.9e-11  Score=89.48  Aligned_cols=89  Identities=15%  Similarity=0.087  Sum_probs=66.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCC-CCCCceEEEecCCChHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTP-DAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +.++++|||||+|+||..++++|++.|++|++++|+..........   +...... ....+.++.+|++|.+++..+++
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   99 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDE---VKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK   99 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHH---HHHTSCHHHHTTEEEEECCTTCHHHHHHHTT
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhh---hhhccccccCCceEEEEccCCCHHHHHHHhc
Confidence            4678999999999999999999999999999999975543322222   2210000 01467889999999987776665


Q ss_pred             HHHHhcCCccEEEeCCcCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~  136 (149)
                             .+|+|||+||...
T Consensus       100 -------~~d~Vih~A~~~~  112 (351)
T 3ruf_A          100 -------GVDHVLHQAALGS  112 (351)
T ss_dssp             -------TCSEEEECCCCCC
T ss_pred             -------CCCEEEECCccCC
Confidence                   6899999999743

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.23  E-value=8.7e-11  Score=88.13  Aligned_cols=84  Identities=23%  Similarity=0.311  Sum_probs=62.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      ++|||||+++||.+++++|++.|++|+++++.........+.+....      +..+.++.+|+++.+++..+++..   
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~~---   72 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG------GKHPTFVEGDIRNEALMTEILHDH---   72 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH------TSCCEEEECCTTCHHHHHHHHHHT---
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc------CCcceEEEccCCCHHHHHHHhhcc---
Confidence            58999999999999999999999999998865332222222222211      235678899999999888877652   


Q ss_pred             cCCccEEEeCCcCCC
Q 044851          122 YDRIDILVNNAAEQY  136 (149)
Q Consensus       122 ~g~id~li~~ag~~~  136 (149)
                        ++|+||||||...
T Consensus        73 --~~D~vih~A~~~~   85 (338)
T 1udb_A           73 --AIDTVIHFAGLKA   85 (338)
T ss_dssp             --TCSEEEECCSCCC
T ss_pred             --CCCEEEECCccCc
Confidence              5999999999753

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.22  E-value=5.7e-11  Score=89.44  Aligned_cols=75  Identities=19%  Similarity=0.186  Sum_probs=59.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      ..+++++|||||+|+||..+++.|++.|++|++++|+...                   ..+.++.+|+++.+++..++.
T Consensus        16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------------------~~~~~~~~Dl~d~~~~~~~~~   76 (347)
T 4id9_A           16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------------------TGGEEVVGSLEDGQALSDAIM   76 (347)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------------------SCCSEEESCTTCHHHHHHHHT
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------------------CCccEEecCcCCHHHHHHHHh
Confidence            4677889999999999999999999999999999987422                   346788999999988777665


Q ss_pred             HHHHhcCCccEEEeCCcCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~  137 (149)
                             .+|+|||+||....
T Consensus        77 -------~~d~vih~A~~~~~   90 (347)
T 4id9_A           77 -------GVSAVLHLGAFMSW   90 (347)
T ss_dssp             -------TCSEEEECCCCCCS
T ss_pred             -------CCCEEEECCcccCc
Confidence                   68999999997643

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.22  E-value=7.9e-11  Score=88.16  Aligned_cols=87  Identities=21%  Similarity=0.114  Sum_probs=65.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      ..++++|||||+|+||.+++++|++.|++|++++|+......  ..++.+.     ....+.++.+|+++.+++..+++.
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~   84 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR--WRLRELG-----IEGDIQYEDGDMADACSVQRAVIK   84 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC--HHHHHTT-----CGGGEEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc--cchhhcc-----ccCceEEEECCCCCHHHHHHHHHH
Confidence            456789999999999999999999999999999997543211  1111110     123467889999999999888876


Q ss_pred             HHHhcCCccEEEeCCcCCC
Q 044851          118 VVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~  136 (149)
                      .     ++|+|||+||...
T Consensus        85 ~-----~~d~Vih~A~~~~   98 (335)
T 1rpn_A           85 A-----QPQEVYNLAAQSF   98 (335)
T ss_dssp             H-----CCSEEEECCSCCC
T ss_pred             c-----CCCEEEECccccc
Confidence            6     6899999999754

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.22  E-value=9.1e-11  Score=89.93  Aligned_cols=91  Identities=15%  Similarity=0.103  Sum_probs=64.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHH-------------HHHHHHHHHhccCCCCCCceEEEec
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKD-------------AKETLEMLREAKTPDAKDPMAISAD  104 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~D  104 (149)
                      .++..+|||||+|.||.+++++|++.|++|++++|.......             +.+.+..+...   ....+.++.+|
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~v~~~~~D   85 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL---TGKSIELYVGD   85 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH---HCCCCEEEESC
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhc---cCCceEEEECC
Confidence            567889999999999999999999999999999875211100             01111111110   13457889999


Q ss_pred             CCChHHHHHHHHHHHHhcCCccEEEeCCcCCC
Q 044851          105 LGFDENCKRVVDEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       105 v~~~~~v~~~~~~~~~~~g~id~li~~ag~~~  136 (149)
                      +++.+++..++...     ++|+||||||...
T Consensus        86 l~d~~~~~~~~~~~-----~~D~Vih~A~~~~  112 (404)
T 1i24_A           86 ICDFEFLAESFKSF-----EPDSVVHFGEQRS  112 (404)
T ss_dssp             TTSHHHHHHHHHHH-----CCSEEEECCSCCC
T ss_pred             CCCHHHHHHHHhcc-----CCCEEEECCCCCC
Confidence            99999988888765     6899999999754

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.21  E-value=1.3e-10  Score=86.59  Aligned_cols=77  Identities=22%  Similarity=0.216  Sum_probs=62.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      ...+++|||||+|+||..++++|++.|++|++++|+... ..                ..+.++.+|++|.+++..+++.
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----------------l~~~~~~~Dl~d~~~~~~~~~~   72 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----------------PNVEMISLDIMDSQRVKKVISD   72 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----------------TTEEEEECCTTCHHHHHHHHHH
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----------------ceeeEEECCCCCHHHHHHHHHh
Confidence            456789999999999999999999999999999987432 10                0357888999999998888776


Q ss_pred             HHHhcCCccEEEeCCcCCC
Q 044851          118 VVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~  136 (149)
                           +++|+||||||...
T Consensus        73 -----~~~d~vih~A~~~~   86 (321)
T 2pk3_A           73 -----IKPDYIFHLAAKSS   86 (321)
T ss_dssp             -----HCCSEEEECCSCCC
T ss_pred             -----cCCCEEEEcCcccc
Confidence                 36999999999754

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.20  E-value=8.7e-11  Score=88.73  Aligned_cols=89  Identities=17%  Similarity=0.151  Sum_probs=65.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChH-HHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDK-DAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +.++++|||||+|+||..++++|++.|++|++++|+..... .+....+.+...   ....+.++.+|+++.+++..+++
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~  101 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK---QWSNFKFIQGDIRNLDDCNNACA  101 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHH---HHTTEEEEECCTTSHHHHHHHHT
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccc---cCCceEEEECCCCCHHHHHHHhc
Confidence            45678999999999999999999999999999999754222 222222111100   02357788999999988777665


Q ss_pred             HHHHhcCCccEEEeCCcCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~  136 (149)
                             ++|+|||+||...
T Consensus       102 -------~~d~vih~A~~~~  114 (352)
T 1sb8_A          102 -------GVDYVLHQAALGS  114 (352)
T ss_dssp             -------TCSEEEECCSCCC
T ss_pred             -------CCCEEEECCcccC
Confidence                   6899999999753

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.19  E-value=9.4e-11  Score=83.03  Aligned_cols=72  Identities=15%  Similarity=0.117  Sum_probs=57.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      +++||||+++||..++++|++.|++|+++.|+.   ..+.    .+      ....+.++.+|++|.++         +.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~---~~~~----~~------~~~~~~~~~~D~~d~~~---------~~   59 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP---QKAA----DR------LGATVATLVKEPLVLTE---------AD   59 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHH----HH------TCTTSEEEECCGGGCCH---------HH
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc---cccc----cc------cCCCceEEecccccccH---------hh
Confidence            499999999999999999999999999999962   2222    11      23467889999999876         22


Q ss_pred             cCCccEEEeCCcCC
Q 044851          122 YDRIDILVNNAAEQ  135 (149)
Q Consensus       122 ~g~id~li~~ag~~  135 (149)
                      +..+|+||||+|..
T Consensus        60 ~~~~d~vi~~ag~~   73 (224)
T 3h2s_A           60 LDSVDAVVDALSVP   73 (224)
T ss_dssp             HTTCSEEEECCCCC
T ss_pred             cccCCEEEECCccC
Confidence            35789999999986

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.19  E-value=5.8e-11  Score=90.59  Aligned_cols=87  Identities=20%  Similarity=0.090  Sum_probs=63.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCCh--HHHHHHHHHHHhccCCCCC-CceEEEecCCChHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQED--KDAKETLEMLREAKTPDAK-DPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++|||||+|+||.++++.|++.|++|++++|+....  ..+......+..    .+. .+.++.+|+++.+++..+++.
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~  104 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN----VNKALMKLHYADLTDASSLRRWIDV  104 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC------------CCEEEEECCTTCHHHHHHHHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhcccc----ccccceEEEECCCCCHHHHHHHHHh
Confidence            6799999999999999999999999999999875431  001111110100    112 577889999999998888877


Q ss_pred             HHHhcCCccEEEeCCcCCC
Q 044851          118 VVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~  136 (149)
                      +     ++|+||||||...
T Consensus       105 ~-----~~d~Vih~A~~~~  118 (381)
T 1n7h_A          105 I-----KPDEVYNLAAQSH  118 (381)
T ss_dssp             H-----CCSEEEECCSCCC
T ss_pred             c-----CCCEEEECCcccC
Confidence            6     6899999999754

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.19  E-value=1.8e-10  Score=94.57  Aligned_cols=88  Identities=22%  Similarity=0.225  Sum_probs=66.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      ++++++|||||+++||.+++++|++.|++|++++|+........+.+..+.      ...+.++.+|+++.+++..+++.
T Consensus         9 ~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~v~~v~~Dl~d~~~l~~~~~~   82 (699)
T 1z45_A            9 STSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT------KHHIPFYEVDLCDRKGLEKVFKE   82 (699)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH------TSCCCEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc------CCceEEEEcCCCCHHHHHHHHHh
Confidence            567899999999999999999999999999999987543322222222221      23567889999999988887765


Q ss_pred             HHHhcCCccEEEeCCcCCC
Q 044851          118 VVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~  136 (149)
                      .     ++|+||||||...
T Consensus        83 ~-----~~D~Vih~A~~~~   96 (699)
T 1z45_A           83 Y-----KIDSVIHFAGLKA   96 (699)
T ss_dssp             S-----CCCEEEECCSCCC
T ss_pred             C-----CCCEEEECCcccC
Confidence            3     6999999999754

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.18  E-value=5.5e-11  Score=84.47  Aligned_cols=75  Identities=15%  Similarity=0.149  Sum_probs=60.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      ++++||||+|+||..+++.|++.|++|++++|+......              ....+.++.+|++|.+++.++++    
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------------~~~~~~~~~~Dl~d~~~~~~~~~----   66 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI--------------ENEHLKVKKADVSSLDEVCEVCK----   66 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC--------------CCTTEEEECCCTTCHHHHHHHHT----
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh--------------ccCceEEEEecCCCHHHHHHHhc----
Confidence            579999999999999999999999999999997432110              12467889999999998877765    


Q ss_pred             hcCCccEEEeCCcCCC
Q 044851          121 AYDRIDILVNNAAEQY  136 (149)
Q Consensus       121 ~~g~id~li~~ag~~~  136 (149)
                         .+|+||||+|...
T Consensus        67 ---~~d~vi~~a~~~~   79 (227)
T 3dhn_A           67 ---GADAVISAFNPGW   79 (227)
T ss_dssp             ---TCSEEEECCCC--
T ss_pred             ---CCCEEEEeCcCCC
Confidence               4899999998753

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.17  E-value=4.7e-11  Score=84.60  Aligned_cols=73  Identities=11%  Similarity=0.213  Sum_probs=59.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCC-hHHHHHHHHHHHH
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGF-DENCKRVVDEVVN  120 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~  120 (149)
                      +++||||+++||..++++|++.|++|++++|+.....               ....+.++.+|++| .+++.++++    
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---------------~~~~~~~~~~D~~d~~~~~~~~~~----   62 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVP---------------QYNNVKAVHFDVDWTPEEMAKQLH----   62 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSC---------------CCTTEEEEECCTTSCHHHHHTTTT----
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchh---------------hcCCceEEEecccCCHHHHHHHHc----
Confidence            5999999999999999999999999999999743211               11457889999999 877766554    


Q ss_pred             hcCCccEEEeCCcCCC
Q 044851          121 AYDRIDILVNNAAEQY  136 (149)
Q Consensus       121 ~~g~id~li~~ag~~~  136 (149)
                         .+|+||||+|...
T Consensus        63 ---~~d~vi~~ag~~~   75 (219)
T 3dqp_A           63 ---GMDAIINVSGSGG   75 (219)
T ss_dssp             ---TCSEEEECCCCTT
T ss_pred             ---CCCEEEECCcCCC
Confidence               5899999999865

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.16  E-value=1.1e-10  Score=88.86  Aligned_cols=88  Identities=16%  Similarity=0.082  Sum_probs=63.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCCh--HHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQED--KDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      +++|||||+++||.++++.|++.|++|++++|+....  ..+......+...   ....+.++.+|++|.+++..+++..
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH---IEGNMKLHYGDLTDSTCLVKIINEV  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC------------CEEEEECCTTCHHHHHHHHHHH
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc---cCCCceEEEccCCCHHHHHHHHHhc
Confidence            5799999999999999999999999999999875421  1111110000000   1235678899999999998888776


Q ss_pred             HHhcCCccEEEeCCcCCC
Q 044851          119 VNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~  136 (149)
                           ++|+||||||...
T Consensus       102 -----~~d~vih~A~~~~  114 (375)
T 1t2a_A          102 -----KPTEIYNLGAQSH  114 (375)
T ss_dssp             -----CCSEEEECCSCCC
T ss_pred             -----CCCEEEECCCccc
Confidence                 6899999999753

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.16  E-value=9.5e-11  Score=82.68  Aligned_cols=71  Identities=11%  Similarity=0.057  Sum_probs=56.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      +++||||+++||..++++|++.|++|++++|+..   .+..    +      . ..+.++.+|++|.++         +.
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~---~~~~----~------~-~~~~~~~~D~~d~~~---------~~   58 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAG---KITQ----T------H-KDINILQKDIFDLTL---------SD   58 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSH---HHHH----H------C-SSSEEEECCGGGCCH---------HH
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCch---hhhh----c------c-CCCeEEeccccChhh---------hh
Confidence            5999999999999999999999999999999732   2111    1      1 357889999999876         22


Q ss_pred             cCCccEEEeCCcCC
Q 044851          122 YDRIDILVNNAAEQ  135 (149)
Q Consensus       122 ~g~id~li~~ag~~  135 (149)
                      +..+|+||||+|..
T Consensus        59 ~~~~d~vi~~ag~~   72 (221)
T 3ew7_A           59 LSDQNVVVDAYGIS   72 (221)
T ss_dssp             HTTCSEEEECCCSS
T ss_pred             hcCCCEEEECCcCC
Confidence            35689999999984

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.15  E-value=1.3e-10  Score=87.10  Aligned_cols=81  Identities=25%  Similarity=0.168  Sum_probs=61.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC--CcEEEEecCCCC--hHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEG--ATVAFTYVKPQE--DKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g--~~Vi~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ++++|||||+|+||.+++++|++.|  ++|++++|....  ...+    ..+.     ....+.++.+|+++.+++..++
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~----~~~~-----~~~~~~~~~~Dl~d~~~~~~~~   73 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL----KDLE-----DDPRYTFVKGDVADYELVKELV   73 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG----TTTT-----TCTTEEEEECCTTCHHHHHHHH
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH----hhhc-----cCCceEEEEcCCCCHHHHHHHh
Confidence            4579999999999999999999997  789999886321  1111    1110     1345778899999998887776


Q ss_pred             HHHHHhcCCccEEEeCCcCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~  136 (149)
                             +++|+||||||...
T Consensus        74 -------~~~d~vih~A~~~~   87 (336)
T 2hun_A           74 -------RKVDGVVHLAAESH   87 (336)
T ss_dssp             -------HTCSEEEECCCCCC
T ss_pred             -------hCCCEEEECCCCcC
Confidence                   26899999999753

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.15  E-value=1.7e-10  Score=87.69  Aligned_cols=80  Identities=14%  Similarity=0.088  Sum_probs=63.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc-CCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCC-ChHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQE-GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLG-FDENCKRVV  115 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~  115 (149)
                      +..++++||||+|.||..++++|++. |++|++++|+......+       .     ....+.++.+|++ +.+.+..++
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~-------~-----~~~~v~~~~~Dl~~d~~~~~~~~   89 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDL-------V-----KHERMHFFEGDITINKEWVEYHV   89 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGG-------G-----GSTTEEEEECCTTTCHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhh-------c-----cCCCeEEEeCccCCCHHHHHHHh
Confidence            55678999999999999999999998 99999999975432211       1     1246788999999 888887777


Q ss_pred             HHHHHhcCCccEEEeCCcCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~  136 (149)
                      +       .+|+|||+||...
T Consensus        90 ~-------~~d~Vih~A~~~~  103 (372)
T 3slg_A           90 K-------KCDVILPLVAIAT  103 (372)
T ss_dssp             H-------HCSEEEECBCCCC
T ss_pred             c-------cCCEEEEcCcccc
Confidence            6       4799999999764

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.15  E-value=1.4e-10  Score=87.22  Aligned_cols=88  Identities=22%  Similarity=0.235  Sum_probs=63.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC--CcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEG--ATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +.++++|||||+|+||..++++|++.|  ..|++.++...... . ..+..+.     ....+.++.+|++|.+++..++
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~-~-~~l~~~~-----~~~~~~~~~~Dl~d~~~~~~~~   94 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN-L-NNVKSIQ-----DHPNYYFVKGEIQNGELLEHVI   94 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC-G-GGGTTTT-----TCTTEEEEECCTTCHHHHHHHH
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc-h-hhhhhhc-----cCCCeEEEEcCCCCHHHHHHHH
Confidence            567889999999999999999999999  55777776532111 0 1111110     2346788999999999998888


Q ss_pred             HHHHHhcCCccEEEeCCcCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~  137 (149)
                      +..     ++|+|||+||....
T Consensus        95 ~~~-----~~d~Vih~A~~~~~  111 (346)
T 4egb_A           95 KER-----DVQVIVNFAAESHV  111 (346)
T ss_dssp             HHH-----TCCEEEECCCCC--
T ss_pred             hhc-----CCCEEEECCcccch
Confidence            764     68999999998653

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.15  E-value=2.5e-10  Score=87.29  Aligned_cols=78  Identities=24%  Similarity=0.231  Sum_probs=62.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      +.++++||||+++||..++++|++.|++|++++|+.......             ....+.++.+|+++.+++..+++  
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------~~~~v~~~~~Dl~d~~~~~~~~~--   92 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-------------DMFCDEFHLVDLRVMENCLKVTE--   92 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-------------GGTCSEEEECCTTSHHHHHHHHT--
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-------------ccCCceEEECCCCCHHHHHHHhC--
Confidence            557899999999999999999999999999999975432110             12356788999999988777663  


Q ss_pred             HHhcCCccEEEeCCcCCC
Q 044851          119 VNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~  136 (149)
                           .+|+|||+||...
T Consensus        93 -----~~d~Vih~A~~~~  105 (379)
T 2c5a_A           93 -----GVDHVFNLAADMG  105 (379)
T ss_dssp             -----TCSEEEECCCCCC
T ss_pred             -----CCCEEEECceecC
Confidence                 5899999999753

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.13  E-value=2.3e-10  Score=86.41  Aligned_cols=81  Identities=21%  Similarity=0.179  Sum_probs=62.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCcEEEEecCCC--ChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           42 VALVTGGDSGIGRAVCHCFAQE-GATVAFTYVKPQ--EDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~-g~~Vi~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      ++|||||+++||.+++++|++. |++|++++|+..  ....+    ..+.     ....+.++.+|+++.+++..++++.
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~~   72 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL----SDIS-----ESNRYNFEHADICDSAEITRIFEQY   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG----TTTT-----TCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh----hhhh-----cCCCeEEEECCCCCHHHHHHHHhhc
Confidence            4999999999999999999998 789999998642  11111    1111     1345778999999999988888763


Q ss_pred             HHhcCCccEEEeCCcCCC
Q 044851          119 VNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~  136 (149)
                           ++|+||||||...
T Consensus        73 -----~~d~vih~A~~~~   85 (361)
T 1kew_A           73 -----QPDAVMHLAAESH   85 (361)
T ss_dssp             -----CCSEEEECCSCCC
T ss_pred             -----CCCEEEECCCCcC
Confidence                 7999999999753

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.13  E-value=5.6e-11  Score=92.20  Aligned_cols=91  Identities=11%  Similarity=0.043  Sum_probs=63.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhcc-----CCCCCCceEEEecCCChHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAK-----TPDAKDPMAISADLGFDENCK  112 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~Dv~~~~~v~  112 (149)
                      ..++++|||||+|+||.+++++|.+.|++|++++|+...........+.+....     ......+.++.+|+++.+++.
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  146 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  146 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence            456789999999999999999999999999999998653323322222221100     001356789999999987766


Q ss_pred             HHHHHHHHhcCCccEEEeCCcCCC
Q 044851          113 RVVDEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       113 ~~~~~~~~~~g~id~li~~ag~~~  136 (149)
                              .++++|+||||||...
T Consensus       147 --------~~~~~d~Vih~A~~~~  162 (427)
T 4f6c_A          147 --------LPENMDTIIHAGARTD  162 (427)
T ss_dssp             --------CSSCCSEEEECCCCC-
T ss_pred             --------CcCCCCEEEECCcccC
Confidence                    4568999999999864

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.12  E-value=5.2e-10  Score=83.53  Aligned_cols=78  Identities=19%  Similarity=0.236  Sum_probs=62.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      ++++||||+|+||.+++++|++.|++|++++|+.....+         .    ....+.++.+|+++.+++.+++++   
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------~----~~~~~~~~~~D~~~~~~~~~~~~~---   65 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED---------A----ITEGAKFYNGDLRDKAFLRDVFTQ---   65 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---------G----SCTTSEEEECCTTCHHHHHHHHHH---
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh---------h----cCCCcEEEECCCCCHHHHHHHHhh---
Confidence            469999999999999999999999999999886432210         0    112577889999999988877765   


Q ss_pred             hcCCccEEEeCCcCCC
Q 044851          121 AYDRIDILVNNAAEQY  136 (149)
Q Consensus       121 ~~g~id~li~~ag~~~  136 (149)
                        .++|+|||+||...
T Consensus        66 --~~~d~vih~a~~~~   79 (330)
T 2c20_A           66 --ENIEAVMHFAADSL   79 (330)
T ss_dssp             --SCEEEEEECCCCCC
T ss_pred             --cCCCEEEECCcccC
Confidence              36999999999753

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.12  E-value=7.7e-10  Score=81.84  Aligned_cols=82  Identities=15%  Similarity=0.230  Sum_probs=62.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCCh--HHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQED--KDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      ++++||||+|+||.++++.|++.|++|+++.|+....  ....+.++.+.      ...+.++.+|++|.+++..+++  
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~------~~~v~~v~~D~~d~~~l~~~~~--   76 (308)
T 1qyc_A            5 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK------ASGANIVHGSIDDHASLVEAVK--   76 (308)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH------TTTCEEECCCTTCHHHHHHHHH--
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH------hCCCEEEEeccCCHHHHHHHHc--
Confidence            4699999999999999999999999999999975432  22222223332      2347788999999988777665  


Q ss_pred             HHhcCCccEEEeCCcCC
Q 044851          119 VNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~  135 (149)
                           .+|+|||++|..
T Consensus        77 -----~~d~vi~~a~~~   88 (308)
T 1qyc_A           77 -----NVDVVISTVGSL   88 (308)
T ss_dssp             -----TCSEEEECCCGG
T ss_pred             -----CCCEEEECCcch
Confidence                 489999999864

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.11  E-value=3.2e-10  Score=85.05  Aligned_cols=85  Identities=21%  Similarity=0.172  Sum_probs=61.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      +++++|||||+|+||.+++++|++.|++|+++.|+........... .+..    ....+.++.+|++|.+++..+++  
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~----~~~~~~~~~~Dl~d~~~~~~~~~--   76 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLL-DLPK----AETHLTLWKADLADEGSFDEAIK--   76 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHH-TSTT----HHHHEEEEECCTTSTTTTHHHHT--
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHH-hccc----CCCeEEEEEcCCCCHHHHHHHHc--
Confidence            5688999999999999999999999999999888754322221111 0000    01236678899999988777664  


Q ss_pred             HHhcCCccEEEeCCcCC
Q 044851          119 VNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~  135 (149)
                           .+|+|||+|+..
T Consensus        77 -----~~d~Vih~A~~~   88 (337)
T 2c29_D           77 -----GCTGVFHVATPM   88 (337)
T ss_dssp             -----TCSEEEECCCCC
T ss_pred             -----CCCEEEEecccc
Confidence                 479999999864

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.11  E-value=2.3e-10  Score=84.63  Aligned_cols=81  Identities=15%  Similarity=0.251  Sum_probs=61.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC-CC-h--HHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP-QE-D--KDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~-~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      ++++||||+|+||.+++++|++.|++|+++.|+. .. .  .... .++.+..      ..+.++.+|++|.+++..+++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~l~~------~~v~~v~~D~~d~~~l~~~~~   75 (307)
T 2gas_A            3 NKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEE-LIDNYQS------LGVILLEGDINDHETLVKAIK   75 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHH-HHHHHHH------TTCEEEECCTTCHHHHHHHHT
T ss_pred             cEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHH-HHHHHHh------CCCEEEEeCCCCHHHHHHHHh
Confidence            5699999999999999999999999999999974 11 1  2221 2233322      236788999999988776664


Q ss_pred             HHHHhcCCccEEEeCCcCC
Q 044851          117 EVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~  135 (149)
                             .+|+|||++|..
T Consensus        76 -------~~d~vi~~a~~~   87 (307)
T 2gas_A           76 -------QVDIVICAAGRL   87 (307)
T ss_dssp             -------TCSEEEECSSSS
T ss_pred             -------CCCEEEECCccc
Confidence                   489999999864

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.10  E-value=1.8e-10  Score=85.39  Aligned_cols=77  Identities=12%  Similarity=0.003  Sum_probs=61.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHc--CCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQE--GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++++||||+|+||.+++++|++.  |++|++++|+.....    .    ..       .+.++.+|+++.+++..++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----~----~~-------~~~~~~~D~~d~~~~~~~~~~   66 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD----V----VN-------SGPFEVVNALDFNQIEHLVEV   66 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH----H----HH-------SSCEEECCTTCHHHHHHHHHH
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc----c----cC-------CCceEEecCCCHHHHHHHHhh
Confidence            357999999999999999999999  899999998754321    1    11       246788999999988887765


Q ss_pred             HHHhcCCccEEEeCCcCCC
Q 044851          118 VVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~  136 (149)
                      .     ++|+|||+||...
T Consensus        67 ~-----~~d~vih~a~~~~   80 (312)
T 2yy7_A           67 H-----KITDIYLMAALLS   80 (312)
T ss_dssp             T-----TCCEEEECCCCCH
T ss_pred             c-----CCCEEEECCccCC
Confidence            4     6899999999743

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.09  E-value=4.3e-11  Score=89.08  Aligned_cols=83  Identities=19%  Similarity=0.223  Sum_probs=58.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEec-CCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYV-KPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      ||++|||||+|+||.+++++|++.|++|+++.| +......... +..+..    ....+.++.+|++|.+++..+++  
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~--   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSF-LTNLPG----ASEKLHFFNADLSNPDSFAAAIE--   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHH-HHTSTT----HHHHEEECCCCTTCGGGGHHHHT--
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHH-HHhhhc----cCCceEEEecCCCCHHHHHHHHc--
Confidence            578999999999999999999999999998888 5321111111 110000    01135677899999998877764  


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                           .+|+|||+|+.
T Consensus        74 -----~~d~vih~A~~   84 (322)
T 2p4h_X           74 -----GCVGIFHTASP   84 (322)
T ss_dssp             -----TCSEEEECCCC
T ss_pred             -----CCCEEEEcCCc
Confidence                 47999999974

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.09  E-value=6.9e-10  Score=82.36  Aligned_cols=77  Identities=25%  Similarity=0.240  Sum_probs=60.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      ++|||||+++||.+++++|++.|++|++++|.......   .          ....+.++.+|+++.+++.++++..   
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~----------~~~~~~~~~~Dl~~~~~~~~~~~~~---   65 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---N----------VPKGVPFFRVDLRDKEGVERAFREF---   65 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---G----------SCTTCCEECCCTTCHHHHHHHHHHH---
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---h----------cccCeEEEECCCCCHHHHHHHHHhc---
Confidence            59999999999999999999999999999885321110   0          1124567889999999888887653   


Q ss_pred             cCCccEEEeCCcCCC
Q 044851          122 YDRIDILVNNAAEQY  136 (149)
Q Consensus       122 ~g~id~li~~ag~~~  136 (149)
                        .+|+|||+||...
T Consensus        66 --~~d~vi~~a~~~~   78 (311)
T 2p5y_A           66 --RPTHVSHQAAQAS   78 (311)
T ss_dssp             --CCSEEEECCSCCC
T ss_pred             --CCCEEEECccccC
Confidence              6899999998753

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.09  E-value=7.7e-10  Score=87.26  Aligned_cols=93  Identities=15%  Similarity=0.174  Sum_probs=64.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHc---CCcEEEEecCCCChHHHHHHHHHHHhc---------cCCCCCCceEEEec
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQE---GATVAFTYVKPQEDKDAKETLEMLREA---------KTPDAKDPMAISAD  104 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~---g~~Vi~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~D  104 (149)
                      ...+++++||||+|+||..++++|++.   |++|++++|+.......... ......         .......+.++.+|
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRL-EKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHH-HGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHH-HHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            357889999999999999999999999   89999999985433222111 111000         00012468899999


Q ss_pred             CCCh------HHHHHHHHHHHHhcCCccEEEeCCcCCCC
Q 044851          105 LGFD------ENCKRVVDEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       105 v~~~------~~v~~~~~~~~~~~g~id~li~~ag~~~~  137 (149)
                      ++++      +.+..+++       ++|+||||||....
T Consensus       149 l~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~  180 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA  180 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB
T ss_pred             CCCcccCCCHHHHHHHHc-------CCCEEEECccccCC
Confidence            9844      45555444       47999999998653

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.09  E-value=3e-10  Score=85.21  Aligned_cols=83  Identities=22%  Similarity=0.231  Sum_probs=62.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      ++++|||||+|+||.+++++|++.|++|+++.|+......... +..+.     ....+.++.+|+++.+++..+++   
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~-~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~---   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSH-LLELQ-----ELGDLKIFRADLTDELSFEAPIA---   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHH-HHHHG-----GGSCEEEEECCTTTSSSSHHHHT---
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHH-HHhcC-----CCCcEEEEecCCCChHHHHHHHc---
Confidence            6789999999999999999999999999988887543221111 11121     12346788899999888776654   


Q ss_pred             HhcCCccEEEeCCcCC
Q 044851          120 NAYDRIDILVNNAAEQ  135 (149)
Q Consensus       120 ~~~g~id~li~~ag~~  135 (149)
                          .+|+|||+||..
T Consensus        80 ----~~D~Vih~A~~~   91 (338)
T 2rh8_A           80 ----GCDFVFHVATPV   91 (338)
T ss_dssp             ----TCSEEEEESSCC
T ss_pred             ----CCCEEEEeCCcc
Confidence                479999999864

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.08  E-value=4.3e-10  Score=84.28  Aligned_cols=75  Identities=12%  Similarity=0.093  Sum_probs=56.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      +++||||+|+||.+++++|++.|++|++++|+......+       .      ...+.++.+|++|.+++..+++     
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l-------~------~~~~~~~~~Dl~d~~~~~~~~~-----   76 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL-------A------YLEPECRVAEMLDHAGLERALR-----   76 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG-------G------GGCCEEEECCTTCHHHHHHHTT-----
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh-------c------cCCeEEEEecCCCHHHHHHHHc-----
Confidence            699999999999999999999999999999975433211       1      1246788999999987776654     


Q ss_pred             cCCccEEEeCCcCCC
Q 044851          122 YDRIDILVNNAAEQY  136 (149)
Q Consensus       122 ~g~id~li~~ag~~~  136 (149)
                        .+|+|||+||...
T Consensus        77 --~~d~vih~a~~~~   89 (342)
T 2x4g_A           77 --GLDGVIFSAGYYP   89 (342)
T ss_dssp             --TCSEEEEC-----
T ss_pred             --CCCEEEECCccCc
Confidence              5899999999753

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.08  E-value=2.3e-10  Score=87.31  Aligned_cols=82  Identities=17%  Similarity=0.127  Sum_probs=63.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcC-CcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEG-ATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      .+++++++||||+|+||..++++|++.| ++|++++|+......   .+   .     ....+.++.+|+++.+++..++
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l---~-----~~~~v~~~~~Dl~d~~~l~~~~   97 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NV---P-----DHPAVRFSETSITDDALLASLQ   97 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GS---C-----CCTTEEEECSCTTCHHHHHHCC
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hc---c-----CCCceEEEECCCCCHHHHHHHh
Confidence            3677899999999999999999999999 999999987433210   00   0     1345778899999988766554


Q ss_pred             HHHHHhcCCccEEEeCCcCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~  136 (149)
                      +       .+|+|||+||...
T Consensus        98 ~-------~~d~Vih~A~~~~  111 (377)
T 2q1s_A           98 D-------EYDYVFHLATYHG  111 (377)
T ss_dssp             S-------CCSEEEECCCCSC
T ss_pred             h-------CCCEEEECCCccC
Confidence            3       6899999999753

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.07  E-value=6.6e-10  Score=82.76  Aligned_cols=79  Identities=14%  Similarity=0.207  Sum_probs=61.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      ++++||||+|+||.++++.|++.|++|+++.|+.....   +.+..+..      ..+.++.+|++|.+++..+++    
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~---~~~~~l~~------~~v~~v~~Dl~d~~~l~~a~~----   78 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKT---TLLDEFQS------LGAIIVKGELDEHEKLVELMK----   78 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCH---HHHHHHHH------TTCEEEECCTTCHHHHHHHHT----
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchh---hHHHHhhc------CCCEEEEecCCCHHHHHHHHc----
Confidence            46999999999999999999999999999999854211   11222222      236789999999988777664    


Q ss_pred             hcCCccEEEeCCcCC
Q 044851          121 AYDRIDILVNNAAEQ  135 (149)
Q Consensus       121 ~~g~id~li~~ag~~  135 (149)
                         .+|+|||+++..
T Consensus        79 ---~~d~vi~~a~~~   90 (318)
T 2r6j_A           79 ---KVDVVISALAFP   90 (318)
T ss_dssp             ---TCSEEEECCCGG
T ss_pred             ---CCCEEEECCchh
Confidence               489999999864

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.07  E-value=1.4e-09  Score=80.64  Aligned_cols=83  Identities=16%  Similarity=0.216  Sum_probs=62.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCCh-HHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQED-KDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      ++++||||+|+||..+++.|++.|++|+++.|+.... .+..+.+..+.      ...+.++.+|++|.+++.++++   
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~------~~~~~~~~~D~~d~~~l~~~~~---   75 (313)
T 1qyd_A            5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK------QLGAKLIEASLDDHQRLVDALK---   75 (313)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH------TTTCEEECCCSSCHHHHHHHHT---
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHH------hCCeEEEeCCCCCHHHHHHHHh---
Confidence            4699999999999999999999999999999975321 22222222232      2347788999999988776664   


Q ss_pred             HhcCCccEEEeCCcCCC
Q 044851          120 NAYDRIDILVNNAAEQY  136 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~  136 (149)
                          .+|+|||++|...
T Consensus        76 ----~~d~vi~~a~~~~   88 (313)
T 1qyd_A           76 ----QVDVVISALAGGV   88 (313)
T ss_dssp             ----TCSEEEECCCCSS
T ss_pred             ----CCCEEEECCcccc
Confidence                4899999999753

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.06  E-value=2.6e-10  Score=84.71  Aligned_cols=71  Identities=21%  Similarity=0.217  Sum_probs=45.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +++++||||+|+||.+++++|++.|++|++++|+...            .    .     ++.+|+++.+++..+++.. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~----~-----~~~~Dl~d~~~~~~~~~~~-   59 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------------P----K-----FEQVNLLDSNAVHHIIHDF-   59 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------------------CHHHHHHH-
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------------C----C-----eEEecCCCHHHHHHHHHhh-
Confidence            5789999999999999999999999999999885211            0    1     5668999998888887765 


Q ss_pred             HhcCCccEEEeCCcCCC
Q 044851          120 NAYDRIDILVNNAAEQY  136 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~  136 (149)
                          ++|+||||||...
T Consensus        60 ----~~d~vih~A~~~~   72 (315)
T 2ydy_A           60 ----QPHVIVHCAAERR   72 (315)
T ss_dssp             ----CCSEEEECC----
T ss_pred             ----CCCEEEECCcccC
Confidence                6899999999754

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.05  E-value=1.6e-09  Score=80.72  Aligned_cols=82  Identities=13%  Similarity=0.146  Sum_probs=61.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC-CC-hHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP-QE-DKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      ++++||||+|+||.++++.|++.|++|++++|+. .. .....+.+..+..      ..+.++.+|++|.+++..+++  
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~------~~v~~v~~D~~d~~~l~~a~~--   76 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS------MGVTIIEGEMEEHEKMVSVLK--   76 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH------TTCEEEECCTTCHHHHHHHHT--
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc------CCcEEEEecCCCHHHHHHHHc--
Confidence            4699999999999999999999999999999974 21 1112222223322      246789999999988777665  


Q ss_pred             HHhcCCccEEEeCCcCC
Q 044851          119 VNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~  135 (149)
                           .+|+|||++|..
T Consensus        77 -----~~d~vi~~a~~~   88 (321)
T 3c1o_A           77 -----QVDIVISALPFP   88 (321)
T ss_dssp             -----TCSEEEECCCGG
T ss_pred             -----CCCEEEECCCcc
Confidence                 489999999864

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.05  E-value=1.5e-10  Score=84.37  Aligned_cols=72  Identities=17%  Similarity=0.208  Sum_probs=59.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      |+++|||++++||..++++|++.|++|++++|+....                ....+.++.+|+++.+++..+++    
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------------~~~~~~~~~~Dl~d~~~~~~~~~----   62 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA----------------AEAHEEIVACDLADAQAVHDLVK----   62 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC----------------CCTTEEECCCCTTCHHHHHHHHT----
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc----------------cCCCccEEEccCCCHHHHHHHHc----
Confidence            5799999999999999999999999999999974321                01235778899999888777664    


Q ss_pred             hcCCccEEEeCCcCC
Q 044851          121 AYDRIDILVNNAAEQ  135 (149)
Q Consensus       121 ~~g~id~li~~ag~~  135 (149)
                         .+|+||||||..
T Consensus        63 ---~~d~vi~~a~~~   74 (267)
T 3ay3_A           63 ---DCDGIIHLGGVS   74 (267)
T ss_dssp             ---TCSEEEECCSCC
T ss_pred             ---CCCEEEECCcCC
Confidence               489999999975

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=99.05  E-value=2.9e-10  Score=81.78  Aligned_cols=80  Identities=18%  Similarity=0.245  Sum_probs=59.3

Q ss_pred             CCCEEEEecC----------------CChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEE
Q 044851           39 RGMVALVTGG----------------DSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS  102 (149)
Q Consensus        39 ~~~~~litG~----------------s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (149)
                      .||++|||||                +|++|+++|+.+++.|+.|+++++.......              ....+  ..
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~--------------~~~~~--~~   65 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE--------------PHPNL--SI   65 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC--------------CCTTE--EE
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc--------------CCCCe--EE
Confidence            5789999999                7779999999999999999999986321100              01112  22


Q ss_pred             ecCCChHHHHHHHHHHHHhcCCccEEEeCCcCCCC
Q 044851          103 ADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       103 ~Dv~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~  137 (149)
                      .|+   ++++.+++.+.+.++++|++|+|||+...
T Consensus        66 ~~v---~s~~em~~~v~~~~~~~Dili~aAAvsD~   97 (232)
T 2gk4_A           66 REI---TNTKDLLIEMQERVQDYQVLIHSMAVSDY   97 (232)
T ss_dssp             EEC---CSHHHHHHHHHHHGGGCSEEEECSBCCSE
T ss_pred             EEH---hHHHHHHHHHHHhcCCCCEEEEcCccccc
Confidence            344   45677788888888899999999998764

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.03  E-value=6.8e-10  Score=81.59  Aligned_cols=75  Identities=11%  Similarity=-0.005  Sum_probs=59.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           42 VALVTGGDSGIGRAVCHCFAQE-GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      +++||||+|+||..+++.|.+. |++|+++.|++.....+             ....+.++.+|++|.+++..+++    
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-------------~~~~v~~~~~D~~d~~~l~~~~~----   64 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-------------WRGKVSVRQLDYFNQESMVEAFK----   64 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-------------GBTTBEEEECCTTCHHHHHHHTT----
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-------------hhCCCEEEEcCCCCHHHHHHHHh----
Confidence            4999999999999999999998 99999999974322111             12457889999999987776654    


Q ss_pred             hcCCccEEEeCCcCCC
Q 044851          121 AYDRIDILVNNAAEQY  136 (149)
Q Consensus       121 ~~g~id~li~~ag~~~  136 (149)
                         .+|+|||++|...
T Consensus        65 ---~~d~vi~~a~~~~   77 (289)
T 3e48_A           65 ---GMDTVVFIPSIIH   77 (289)
T ss_dssp             ---TCSEEEECCCCCC
T ss_pred             ---CCCEEEEeCCCCc
Confidence               5899999998753

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.01  E-value=3.4e-09  Score=78.21  Aligned_cols=77  Identities=16%  Similarity=0.173  Sum_probs=60.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC-CcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEG-ATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .++++||||+|+||.+++++|++.| ++|++++|++.... .    ..+..      ..+.++.+|++|.+++..+++  
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~-~----~~l~~------~~~~~~~~D~~d~~~l~~~~~--   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKA-A----KELRL------QGAEVVQGDQDDQVIMELALN--   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHH-H----HHHHH------TTCEEEECCTTCHHHHHHHHT--
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHH-H----HHHHH------CCCEEEEecCCCHHHHHHHHh--
Confidence            4689999999999999999999998 89999999854321 1    11221      236788999999988777664  


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                           .+|+||||+|.
T Consensus        72 -----~~d~vi~~a~~   82 (299)
T 2wm3_A           72 -----GAYATFIVTNY   82 (299)
T ss_dssp             -----TCSEEEECCCH
T ss_pred             -----cCCEEEEeCCC
Confidence                 48999999985

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=99.01  E-value=4.7e-10  Score=76.22  Aligned_cols=80  Identities=14%  Similarity=0.149  Sum_probs=61.2

Q ss_pred             hHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCCh--HHHHHHHHHHHHhcCCccEE
Q 044851           51 GIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFD--ENCKRVVDEVVNAYDRIDIL  128 (149)
Q Consensus        51 gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~l  128 (149)
                      -++.+.++.|++.|++|++..++........+..+.+..    .+..+..+.+|++++  +++..+++.+.+.+|+ |+|
T Consensus        27 ~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~----~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVL  101 (157)
T 3gxh_A           27 LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQ----AGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVL  101 (157)
T ss_dssp             CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHH----TTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEE
T ss_pred             CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHH----cCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEE
Confidence            467899999999999999998864332211111222333    456677888999999  9999999999998999 999


Q ss_pred             EeCCcCC
Q 044851          129 VNNAAEQ  135 (149)
Q Consensus       129 i~~ag~~  135 (149)
                      |||+|+.
T Consensus       102 VnnAgg~  108 (157)
T 3gxh_A          102 VHCLANY  108 (157)
T ss_dssp             EECSBSH
T ss_pred             EECCCCC
Confidence            9999974

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.00  E-value=1.6e-09  Score=81.09  Aligned_cols=81  Identities=20%  Similarity=0.137  Sum_probs=59.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHc---C---CcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           42 VALVTGGDSGIGRAVCHCFAQE---G---ATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~---g---~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +++||||+|+||.+++++|++.   |   ++|++++|+......  +.+..+.     ....+.++.+|+++.+++..++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~--~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR--ANLAPVD-----ADPRLRFVHGDIRDAGLLAREL   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG--GGGGGGT-----TCTTEEEEECCTTCHHHHHHHT
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCch--hhhhhcc-----cCCCeEEEEcCCCCHHHHHHHh
Confidence            5999999999999999999996   7   899999886421110  0011111     1345778899999998777665


Q ss_pred             HHHHHhcCCccEEEeCCcCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~  136 (149)
                             .++|+|||+||...
T Consensus        75 -------~~~d~Vih~A~~~~   88 (337)
T 1r6d_A           75 -------RGVDAIVHFAAESH   88 (337)
T ss_dssp             -------TTCCEEEECCSCCC
T ss_pred             -------cCCCEEEECCCccC
Confidence                   47999999999753

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.00  E-value=5.8e-10  Score=81.72  Aligned_cols=74  Identities=12%  Similarity=0.163  Sum_probs=58.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc--CCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQE--GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      |+++||||+|+||.++++.|++.  |++|++++|+......       +..      ..+.++.+|++|.+++..+++  
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-------l~~------~~~~~~~~D~~d~~~l~~~~~--   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST-------LAD------QGVEVRHGDYNQPESLQKAFA--   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH-------HHH------TTCEEEECCTTCHHHHHHHTT--
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH-------Hhh------cCCeEEEeccCCHHHHHHHHh--
Confidence            35999999999999999999998  9999999997543321       111      236788999999887776654  


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                           .+|+|||++|.
T Consensus        66 -----~~d~vi~~a~~   76 (287)
T 2jl1_A           66 -----GVSKLLFISGP   76 (287)
T ss_dssp             -----TCSEEEECCCC
T ss_pred             -----cCCEEEEcCCC
Confidence                 47999999986

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.00  E-value=2.3e-09  Score=79.58  Aligned_cols=73  Identities=21%  Similarity=0.217  Sum_probs=58.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      ++++||||+|.||..+++.|++.|++|++++|+....    . +         .  .+.++.+|++ .+++.++++    
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~-~---------~--~~~~~~~Dl~-~~~~~~~~~----   61 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNK----A-I---------N--DYEYRVSDYT-LEDLINQLN----   61 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------------------CCEEEECCCC-HHHHHHHTT----
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcc----c-C---------C--ceEEEEcccc-HHHHHHhhc----
Confidence            6799999999999999999999999999999972211    1 1         1  4678999999 877766654    


Q ss_pred             hcCCccEEEeCCcCCCC
Q 044851          121 AYDRIDILVNNAAEQYE  137 (149)
Q Consensus       121 ~~g~id~li~~ag~~~~  137 (149)
                         ++|+|||+||....
T Consensus        62 ---~~d~Vih~a~~~~~   75 (311)
T 3m2p_A           62 ---DVDAVVHLAATRGS   75 (311)
T ss_dssp             ---TCSEEEECCCCCCS
T ss_pred             ---CCCEEEEccccCCC
Confidence               68999999998654

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.00  E-value=9e-10  Score=82.80  Aligned_cols=81  Identities=21%  Similarity=0.227  Sum_probs=60.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc--CCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQE--GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      +++|||||+|+||.+++++|++.  |++|++++|+......  +.+..+      ....+.++.+|+++.+++..+++  
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~--~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~--   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNK--ANLEAI------LGDRVELVVGDIADAELVDKLAA--   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCG--GGTGGG------CSSSEEEEECCTTCHHHHHHHHT--
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCh--hHHhhh------ccCCeEEEECCCCCHHHHHHHhh--
Confidence            47999999999999999999999  8899999986421110  011111      12457788999999987776664  


Q ss_pred             HHhcCCccEEEeCCcCCC
Q 044851          119 VNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~  136 (149)
                           .+|+||||||...
T Consensus        75 -----~~d~vih~A~~~~   87 (348)
T 1oc2_A           75 -----KADAIVHYAAESH   87 (348)
T ss_dssp             -----TCSEEEECCSCCC
T ss_pred             -----cCCEEEECCcccC
Confidence                 3599999999753

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=98.98  E-value=8.4e-10  Score=83.36  Aligned_cols=78  Identities=10%  Similarity=0.090  Sum_probs=61.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC-----CcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEG-----ATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g-----~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      +++++||||+|+||..++++|++.|     ++|++++|+.....          .    ....+.++.+|+++.+++.++
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~----------~----~~~~~~~~~~Dl~d~~~~~~~   66 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW----------H----EDNPINYVQCDISDPDDSQAK   66 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC----------C----CSSCCEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc----------c----ccCceEEEEeecCCHHHHHHH
Confidence            4679999999999999999999999     89999999754321          0    234577889999998877766


Q ss_pred             HHHHHHhcCCccEEEeCCcCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~  135 (149)
                      ++..    .++|+|||+||..
T Consensus        67 ~~~~----~~~d~vih~a~~~   83 (364)
T 2v6g_A           67 LSPL----TDVTHVFYVTWAN   83 (364)
T ss_dssp             HTTC----TTCCEEEECCCCC
T ss_pred             HhcC----CCCCEEEECCCCC
Confidence            5432    2489999999975

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=98.97  E-value=2.7e-09  Score=79.95  Aligned_cols=77  Identities=16%  Similarity=0.113  Sum_probs=58.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc-CCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCCh-HHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQE-GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFD-ENCKRVVDEV  118 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~  118 (149)
                      ++++||||+|+||..++++|++. |++|++++|+......       +.     ....+.++.+|+++. +.+..+++  
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-------~~-----~~~~~~~~~~D~~~~~~~~~~~~~--   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR-------FL-----NHPHFHFVEGDISIHSEWIEYHVK--   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGG-------GT-----TCTTEEEEECCTTTCSHHHHHHHH--
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHH-------hh-----cCCCeEEEeccccCcHHHHHhhcc--
Confidence            36999999999999999999998 8999999997432211       10     123577889999984 45655554  


Q ss_pred             HHhcCCccEEEeCCcCCC
Q 044851          119 VNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~  136 (149)
                           .+|+|||+||...
T Consensus        67 -----~~d~vih~A~~~~   79 (345)
T 2bll_A           67 -----KCDVVLPLVAIAT   79 (345)
T ss_dssp             -----HCSEEEECBCCCC
T ss_pred             -----CCCEEEEcccccC
Confidence                 3799999999754

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=98.96  E-value=7e-10  Score=83.90  Aligned_cols=84  Identities=15%  Similarity=0.247  Sum_probs=58.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcC-CcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEG-ATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      .+.+++++||||+|+||..++++|++.| +.|++++|+..... .    ..+      .  .+. +.+|+++.+.+..++
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~----~~~------~--~~~-~~~d~~~~~~~~~~~  108 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-F----VNL------V--DLN-IADYMDKEDFLIQIM  108 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-G----GGT------T--TSC-CSEEEEHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-h----hcc------c--Cce-EeeecCcHHHHHHHH
Confidence            3567889999999999999999999999 89999988743211 1    000      1  122 568998888777666


Q ss_pred             HHHHHhcCCccEEEeCCcCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~  136 (149)
                      +.  ..++++|+|||+||...
T Consensus       109 ~~--~~~~~~d~Vih~A~~~~  127 (357)
T 2x6t_A          109 AG--EEFGDVEAIFHEGACSS  127 (357)
T ss_dssp             TT--CCCSSCCEEEECCSCCC
T ss_pred             hh--cccCCCCEEEECCcccC
Confidence            53  12457999999999754

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=98.96  E-value=4e-09  Score=76.59  Aligned_cols=68  Identities=19%  Similarity=0.222  Sum_probs=56.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      +++||||+++||.+++++|++ |++|++++|+....           .    .      +.+|+++.+++.++++.+   
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~-----------~----~------~~~Dl~~~~~~~~~~~~~---   56 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ-----------G----G------YKLDLTDFPRLEDFIIKK---   56 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT-----------T----C------EECCTTSHHHHHHHHHHH---
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC-----------C----C------ceeccCCHHHHHHHHHhc---
Confidence            499999999999999999994 89999999974210           1    1      779999999998888775   


Q ss_pred             cCCccEEEeCCcCCC
Q 044851          122 YDRIDILVNNAAEQY  136 (149)
Q Consensus       122 ~g~id~li~~ag~~~  136 (149)
                        ++|+||||||...
T Consensus        57 --~~d~vi~~a~~~~   69 (273)
T 2ggs_A           57 --RPDVIINAAAMTD   69 (273)
T ss_dssp             --CCSEEEECCCCCC
T ss_pred             --CCCEEEECCcccC
Confidence              6899999999754

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=98.95  E-value=3e-09  Score=78.91  Aligned_cols=70  Identities=21%  Similarity=0.284  Sum_probs=58.2

Q ss_pred             EEEecCCChHHHHHHHHHHHc--CCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           43 ALVTGGDSGIGRAVCHCFAQE--GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      +|||||+|+||..++++|++.  |++|++++|+....                  ..+.++.+|++|.+++..+++..  
T Consensus         2 vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~------------------~~~~~~~~D~~d~~~~~~~~~~~--   61 (317)
T 3ajr_A            2 ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT------------------GGIKFITLDVSNRDEIDRAVEKY--   61 (317)
T ss_dssp             EEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC------------------TTCCEEECCTTCHHHHHHHHHHT--
T ss_pred             EEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc------------------cCceEEEecCCCHHHHHHHHhhc--
Confidence            899999999999999999998  88999998864321                  13467889999999888877652  


Q ss_pred             hcCCccEEEeCCcCC
Q 044851          121 AYDRIDILVNNAAEQ  135 (149)
Q Consensus       121 ~~g~id~li~~ag~~  135 (149)
                         .+|+|||+||..
T Consensus        62 ---~~d~vih~a~~~   73 (317)
T 3ajr_A           62 ---SIDAIFHLAGIL   73 (317)
T ss_dssp             ---TCCEEEECCCCC
T ss_pred             ---CCcEEEECCccc
Confidence               699999999974

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=98.95  E-value=1e-09  Score=80.56  Aligned_cols=72  Identities=19%  Similarity=0.172  Sum_probs=58.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +++++||| +|+||..+++.|++.|++|++++|+...                 ....+.++.+|+++.+++..+++   
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------------~~~~~~~~~~Dl~d~~~~~~~~~---   61 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQP-----------------MPAGVQTLIADVTRPDTLASIVH---   61 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSC-----------------CCTTCCEEECCTTCGGGCTTGGG---
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccc-----------------cccCCceEEccCCChHHHHHhhc---
Confidence            45799999 5999999999999999999999997432                 12456788999999988776654   


Q ss_pred             HhcCCccEEEeCCcCC
Q 044851          120 NAYDRIDILVNNAAEQ  135 (149)
Q Consensus       120 ~~~g~id~li~~ag~~  135 (149)
                         +++|+|||+||..
T Consensus        62 ---~~~d~vih~a~~~   74 (286)
T 3gpi_A           62 ---LRPEILVYCVAAS   74 (286)
T ss_dssp             ---GCCSEEEECHHHH
T ss_pred             ---CCCCEEEEeCCCC
Confidence               2699999999864

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=98.94  E-value=2.5e-10  Score=80.23  Aligned_cols=72  Identities=13%  Similarity=-0.059  Sum_probs=56.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC--cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      ++++++||||+++||.+++++|++.|+  +|++++|+...                 ....+.++.+|+++.+++.+++ 
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----------------~~~~~~~~~~D~~~~~~~~~~~-   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----------------EHPRLDNPVGPLAELLPQLDGS-   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----------------CCTTEECCBSCHHHHGGGCCSC-
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----------------cCCCceEEeccccCHHHHHHhh-
Confidence            457899999999999999999999998  89999987432                 0124566778988876655443 


Q ss_pred             HHHHhcCCccEEEeCCcCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~  136 (149)
                              +|+||||+|...
T Consensus        66 --------~d~vi~~a~~~~   77 (215)
T 2a35_A           66 --------IDTAFCCLGTTI   77 (215)
T ss_dssp             --------CSEEEECCCCCH
T ss_pred             --------hcEEEECeeecc
Confidence                    899999999753

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=98.94  E-value=1.4e-09  Score=79.47  Aligned_cols=72  Identities=13%  Similarity=0.210  Sum_probs=56.1

Q ss_pred             EEEecCCChHHHHHHHHHHHc--CCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           43 ALVTGGDSGIGRAVCHCFAQE--GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      ++||||+|+||.+++++|++.  |++|++++|+......+       ..      ..+.++.+|++|.+++..+++    
T Consensus         2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~-------~~------~~~~~~~~D~~d~~~~~~~~~----   64 (286)
T 2zcu_A            2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQAL-------AA------QGITVRQADYGDEAALTSALQ----   64 (286)
T ss_dssp             EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHH-------HH------TTCEEEECCTTCHHHHHHHTT----
T ss_pred             EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhh-------hc------CCCeEEEcCCCCHHHHHHHHh----
Confidence            899999999999999999998  99999999975433211       11      236788999999887766654    


Q ss_pred             hcCCccEEEeCCcC
Q 044851          121 AYDRIDILVNNAAE  134 (149)
Q Consensus       121 ~~g~id~li~~ag~  134 (149)
                         .+|+|||++|.
T Consensus        65 ---~~d~vi~~a~~   75 (286)
T 2zcu_A           65 ---GVEKLLLISSS   75 (286)
T ss_dssp             ---TCSEEEECC--
T ss_pred             ---CCCEEEEeCCC
Confidence               47999999986

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=98.94  E-value=2.1e-09  Score=78.97  Aligned_cols=65  Identities=22%  Similarity=0.297  Sum_probs=55.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      ..++++||||+|+||.+++++|++.|++|++++|+                            .+|+++.+++..+++..
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------------~~Dl~d~~~~~~~~~~~   62 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------------------DLDITNVLAVNKFFNEK   62 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------------------TCCTTCHHHHHHHHHHH
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------------------cCCCCCHHHHHHHHHhc
Confidence            45689999999999999999999999999999874                            16999998888887765


Q ss_pred             HHhcCCccEEEeCCcCCC
Q 044851          119 VNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~  136 (149)
                           ++|+||||||...
T Consensus        63 -----~~d~vih~A~~~~   75 (292)
T 1vl0_A           63 -----KPNVVINCAAHTA   75 (292)
T ss_dssp             -----CCSEEEECCCCCC
T ss_pred             -----CCCEEEECCccCC
Confidence                 6899999999753

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=98.93  E-value=8.4e-10  Score=81.78  Aligned_cols=74  Identities=19%  Similarity=0.130  Sum_probs=57.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      +++|||||+|+||.++++.|++.|++|++++|+.......             ....+.++.+|+++.+ +..++.    
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------~~~~~~~~~~Dl~d~~-~~~~~~----   62 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF-------------VNPSAELHVRDLKDYS-WGAGIK----   62 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG-------------SCTTSEEECCCTTSTT-TTTTCC----
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh-------------cCCCceEEECccccHH-HHhhcC----
Confidence            3699999999999999999999999999999875432211             1345778899999976 544332    


Q ss_pred             hcCCccEEEeCCcCCC
Q 044851          121 AYDRIDILVNNAAEQY  136 (149)
Q Consensus       121 ~~g~id~li~~ag~~~  136 (149)
                         . |+|||+||...
T Consensus        63 ---~-d~vih~A~~~~   74 (312)
T 3ko8_A           63 ---G-DVVFHFAANPE   74 (312)
T ss_dssp             ---C-SEEEECCSSCS
T ss_pred             ---C-CEEEECCCCCC
Confidence               2 99999999643

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=98.93  E-value=8.8e-09  Score=78.23  Aligned_cols=79  Identities=15%  Similarity=0.074  Sum_probs=60.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEec-CCChHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISAD-LGFDENCKRVVDEV  118 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-v~~~~~v~~~~~~~  118 (149)
                      +++++|||++++||.++++.|++.|++|++++|+..... .    +.+.     ....+.++.+| ++|.+++..+++  
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~----~~l~-----~~~~v~~v~~D~l~d~~~l~~~~~--   72 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI-A----EELQ-----AIPNVTLFQGPLLNNVPLMDTLFE--   72 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH-H----HHHH-----TSTTEEEEESCCTTCHHHHHHHHT--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh-H----HHHh-----hcCCcEEEECCccCCHHHHHHHHh--
Confidence            567999999999999999999999999999999754321 1    1122     12346788999 999988777654  


Q ss_pred             HHhcCCccEEEeCCcCC
Q 044851          119 VNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~  135 (149)
                           .+|+||+|++..
T Consensus        73 -----~~d~Vi~~a~~~   84 (352)
T 1xgk_A           73 -----GAHLAFINTTSQ   84 (352)
T ss_dssp             -----TCSEEEECCCST
T ss_pred             -----cCCEEEEcCCCC
Confidence                 479999998753

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=98.91  E-value=3.3e-09  Score=79.72  Aligned_cols=79  Identities=18%  Similarity=0.122  Sum_probs=57.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +.+++++||||+|+||..++++|++.|++|++++|+......   .+..+.     ....+.++.+|+.+..        
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~-----~~~~~~~~~~D~~~~~--------   88 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKR---NVEHWI-----GHENFELINHDVVEPL--------   88 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GTGGGT-----TCTTEEEEECCTTSCC--------
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchh---hhhhhc-----cCCceEEEeCccCChh--------
Confidence            567889999999999999999999999999999986432211   011110     1245778889998753        


Q ss_pred             HHHhcCCccEEEeCCcCCC
Q 044851          118 VVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~  136 (149)
                          +..+|+|||+||...
T Consensus        89 ----~~~~d~vih~A~~~~  103 (343)
T 2b69_A           89 ----YIEVDQIYHLASPAS  103 (343)
T ss_dssp             ----CCCCSEEEECCSCCS
T ss_pred             ----hcCCCEEEECccccC
Confidence                357999999999754

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=98.87  E-value=6.1e-09  Score=77.40  Aligned_cols=66  Identities=17%  Similarity=0.133  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .+++++||||+|+||..++++|++.|++|+++.|+.                           .+|+++.+++..+++..
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------------------~~D~~d~~~~~~~~~~~   54 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------------ELNLLDSRAVHDFFASE   54 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------------TCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------------------cCCccCHHHHHHHHHhc
Confidence            356899999999999999999999999988877641                           16999998888887765


Q ss_pred             HHhcCCccEEEeCCcCCC
Q 044851          119 VNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~  136 (149)
                           ++|+|||+||...
T Consensus        55 -----~~d~vih~a~~~~   67 (321)
T 1e6u_A           55 -----RIDQVYLAAAKVG   67 (321)
T ss_dssp             -----CCSEEEECCCCCC
T ss_pred             -----CCCEEEEcCeecC
Confidence                 6899999999753

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=98.87  E-value=6.9e-09  Score=84.73  Aligned_cols=80  Identities=14%  Similarity=0.081  Sum_probs=60.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc-CCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHH-HHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQE-GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDEN-CKRVV  115 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~  115 (149)
                      +++++++||||+|+||.+++++|++. |++|++++|+......+       .     ....+.++.+|+++.++ +..++
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~-------~-----~~~~v~~v~~Dl~d~~~~~~~~~  380 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF-------L-----NHPHFHFVEGDISIHSEWIEYHV  380 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG-------T-----TCTTEEEEECCTTTCHHHHHHHH
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh-------c-----cCCceEEEECCCCCcHHHHHHhh
Confidence            46788999999999999999999998 89999999975332111       0     23457788999998764 44444


Q ss_pred             HHHHHhcCCccEEEeCCcCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~  136 (149)
                      +       ++|+|||+||...
T Consensus       381 ~-------~~D~Vih~Aa~~~  394 (660)
T 1z7e_A          381 K-------KCDVVLPLVAIAT  394 (660)
T ss_dssp             H-------HCSEEEECCCCCC
T ss_pred             c-------CCCEEEECceecC
Confidence            3       4799999999754

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=98.86  E-value=2.8e-09  Score=78.14  Aligned_cols=62  Identities=21%  Similarity=0.249  Sum_probs=55.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      +++||||+|+||.++++.|.+.|++|++++|.                            .+|+++.+++..++...   
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------------~~D~~d~~~~~~~~~~~---   55 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------------------LLDITNISQVQQVVQEI---   55 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------------------TSCTTCHHHHHHHHHHH---
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------------------ccCCCCHHHHHHHHHhc---
Confidence            79999999999999999999999999999882                            16999999888888776   


Q ss_pred             cCCccEEEeCCcCCC
Q 044851          122 YDRIDILVNNAAEQY  136 (149)
Q Consensus       122 ~g~id~li~~ag~~~  136 (149)
                        ++|+|||+||...
T Consensus        56 --~~d~vi~~a~~~~   68 (287)
T 3sc6_A           56 --RPHIIIHCAAYTK   68 (287)
T ss_dssp             --CCSEEEECCCCCC
T ss_pred             --CCCEEEECCcccC
Confidence              6899999999864

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=98.85  E-value=1.8e-09  Score=85.54  Aligned_cols=89  Identities=11%  Similarity=0.056  Sum_probs=63.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhcc-----CCCCCCceEEEecCCChHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAK-----TPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .++++||||+|+||..++++|.+.|++|+++.|+...........+.+....     .....++.++.+|+++.+.+.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            4689999999999999999999889999999998653322222222221100     002356889999999977665  


Q ss_pred             HHHHHHhcCCccEEEeCCcCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~  136 (149)
                            ....+|+||||||...
T Consensus       228 ------~~~~~D~Vih~Aa~~~  243 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTD  243 (508)
T ss_dssp             ------CSSCCSEEEECCCC--
T ss_pred             ------CccCCCEEEECCceec
Confidence                  3457999999999764

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=98.83  E-value=7.9e-09  Score=76.05  Aligned_cols=65  Identities=20%  Similarity=0.248  Sum_probs=55.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      +++||||+|+||..++++|. .|++|++++|+.                        .++.+|+++.+++.++++..   
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~------------------------~~~~~D~~d~~~~~~~~~~~---   53 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHS------------------------KEFCGDFSNPKGVAETVRKL---   53 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTC------------------------SSSCCCTTCHHHHHHHHHHH---
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEecccc------------------------ccccccCCCHHHHHHHHHhc---
Confidence            59999999999999999999 899999998862                        12458999999888887764   


Q ss_pred             cCCccEEEeCCcCCC
Q 044851          122 YDRIDILVNNAAEQY  136 (149)
Q Consensus       122 ~g~id~li~~ag~~~  136 (149)
                        ++|+|||+||...
T Consensus        54 --~~d~vih~a~~~~   66 (299)
T 1n2s_A           54 --RPDVIVNAAAHTA   66 (299)
T ss_dssp             --CCSEEEECCCCCC
T ss_pred             --CCCEEEECcccCC
Confidence              6899999999754

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=98.81  E-value=5.7e-09  Score=77.43  Aligned_cols=73  Identities=18%  Similarity=0.218  Sum_probs=53.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      +++|||||+|+||.+++++|++.| .++++.+........             ....+.++.+|+++ +++..++.    
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~-------------~~~~~~~~~~Dl~~-~~~~~~~~----   62 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEF-------------VNEAARLVKADLAA-DDIKDYLK----   62 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGG-------------SCTTEEEECCCTTT-SCCHHHHT----
T ss_pred             CEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhh-------------cCCCcEEEECcCCh-HHHHHHhc----
Confidence            369999999999999999999999 555444432221110             13356788899998 77766654    


Q ss_pred             hcCCccEEEeCCcCC
Q 044851          121 AYDRIDILVNNAAEQ  135 (149)
Q Consensus       121 ~~g~id~li~~ag~~  135 (149)
                         .+|+|||+|+..
T Consensus        63 ---~~d~vih~a~~~   74 (313)
T 3ehe_A           63 ---GAEEVWHIAANP   74 (313)
T ss_dssp             ---TCSEEEECCCCC
T ss_pred             ---CCCEEEECCCCC
Confidence               689999999964

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.79  E-value=5.4e-08  Score=61.89  Aligned_cols=75  Identities=12%  Similarity=0.089  Sum_probs=56.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC-CcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEG-ATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      ++.++|+|+ |++|..+++.|.+.| ++|++++|++   ..+..    +.      ...+.++.+|+.+.+++..++.  
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~---~~~~~----~~------~~~~~~~~~d~~~~~~~~~~~~--   68 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDL---AALAV----LN------RMGVATKQVDAKDEAGLAKALG--   68 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCH---HHHHH----HH------TTTCEEEECCTTCHHHHHHHTT--
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCH---HHHHH----HH------hCCCcEEEecCCCHHHHHHHHc--
Confidence            467999999 999999999999999 7899999862   22221    11      1235678899999876665542  


Q ss_pred             HHhcCCccEEEeCCcCC
Q 044851          119 VNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~  135 (149)
                           .+|++|++++..
T Consensus        69 -----~~d~vi~~~~~~   80 (118)
T 3ic5_A           69 -----GFDAVISAAPFF   80 (118)
T ss_dssp             -----TCSEEEECSCGG
T ss_pred             -----CCCEEEECCCch
Confidence                 689999999754

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.77  E-value=1.2e-07  Score=73.53  Aligned_cols=83  Identities=18%  Similarity=0.223  Sum_probs=64.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC---cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGA---TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~---~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +.++|+|+ ++||..+++.|++.|.   .|++.+|+   .+.+.+..+++...   .+..+..+.+|+++.+++.++++.
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~---~~~~~~la~~l~~~---~~~~~~~~~~D~~d~~~l~~~l~~   74 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRT---LSKCQEIAQSIKAK---GYGEIDITTVDADSIEELVALINE   74 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESC---HHHHHHHHHHHHHT---TCCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECC---HHHHHHHHHHhhhh---cCCceEEEEecCCCHHHHHHHHHh
Confidence            36899999 8999999999999983   79999987   44455555555431   123577889999999999998887


Q ss_pred             HHHhcCCccEEEeCCcCC
Q 044851          118 VVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~  135 (149)
                      .     ++|+||||++..
T Consensus        75 ~-----~~DvVin~ag~~   87 (405)
T 4ina_A           75 V-----KPQIVLNIALPY   87 (405)
T ss_dssp             H-----CCSEEEECSCGG
T ss_pred             h-----CCCEEEECCCcc
Confidence            6     689999999863

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=98.73  E-value=2.7e-09  Score=79.06  Aligned_cols=38  Identities=21%  Similarity=0.198  Sum_probs=33.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      +++++++||||+|+||..+++.|++.|++|++++|+..
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   42 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV   42 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence            45678999999999999999999999999999999754

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=98.72  E-value=2.7e-08  Score=72.82  Aligned_cols=70  Identities=16%  Similarity=0.107  Sum_probs=54.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      ++++|||+ |.||..+++.|.+.|++|++++|+.....   .    +..      ..+.++.+|+++.+           
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~----~~~------~~~~~~~~D~~d~~-----------   60 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQME---A----IRA------SGAEPLLWPGEEPS-----------   60 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHH---H----HHH------TTEEEEESSSSCCC-----------
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhh---h----Hhh------CCCeEEEecccccc-----------
Confidence            57999998 99999999999999999999999743221   1    111      24678889998832           


Q ss_pred             hcCCccEEEeCCcCCC
Q 044851          121 AYDRIDILVNNAAEQY  136 (149)
Q Consensus       121 ~~g~id~li~~ag~~~  136 (149)
                       +..+|+|||+|+...
T Consensus        61 -~~~~d~vi~~a~~~~   75 (286)
T 3ius_A           61 -LDGVTHLLISTAPDS   75 (286)
T ss_dssp             -CTTCCEEEECCCCBT
T ss_pred             -cCCCCEEEECCCccc
Confidence             457899999998754

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=98.71  E-value=1.4e-08  Score=74.76  Aligned_cols=70  Identities=23%  Similarity=0.251  Sum_probs=53.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      ++++++|||||+|+||..+++.|.+.|+      +..  .                ....+.++.+|++|.+++..+++.
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~--~----------------~~~~~~~~~~D~~d~~~~~~~~~~   59 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPG--E----------------DWVFVSSKDADLTDTAQTRALFEK   59 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTT--C----------------EEEECCTTTCCTTSHHHHHHHHHH
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------ccc--c----------------cccccCceecccCCHHHHHHHHhh
Confidence            5677899999999999999999999997      110  0                111233446899999988888775


Q ss_pred             HHHhcCCccEEEeCCcCCC
Q 044851          118 VVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~  136 (149)
                      .     ++|+|||+||...
T Consensus        60 ~-----~~d~Vih~A~~~~   73 (319)
T 4b8w_A           60 V-----QPTHVIHLAAMVG   73 (319)
T ss_dssp             S-----CCSEEEECCCCCC
T ss_pred             c-----CCCEEEECceecc
Confidence            3     6899999999853

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=98.68  E-value=2.5e-08  Score=73.57  Aligned_cols=78  Identities=14%  Similarity=0.205  Sum_probs=55.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcC-CcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEG-ATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      ++||||+|+||.+++++|++.| +.|+++.|+..... ..    .+..        +. +.+|+++.+.+..+++...  
T Consensus         2 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~----~~~~--------~~-~~~d~~~~~~~~~~~~~~~--   65 (310)
T 1eq2_A            2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FV----NLVD--------LN-IADYMDKEDFLIQIMAGEE--   65 (310)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-GH----HHHT--------SC-CSEEEEHHHHHHHHHTTCC--
T ss_pred             EEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch-hh----hcCc--------ce-eccccccHHHHHHHHhccc--
Confidence            8999999999999999999999 88999988743321 11    1111        11 5679888777666554210  


Q ss_pred             cCCccEEEeCCcCCC
Q 044851          122 YDRIDILVNNAAEQY  136 (149)
Q Consensus       122 ~g~id~li~~ag~~~  136 (149)
                      ++++|+|||+||...
T Consensus        66 ~~~~d~vi~~a~~~~   80 (310)
T 1eq2_A           66 FGDVEAIFHEGACSS   80 (310)
T ss_dssp             CSSCCEEEECCSCCC
T ss_pred             cCCCcEEEECccccc
Confidence            236999999999754

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.60  E-value=1.4e-07  Score=70.84  Aligned_cols=80  Identities=15%  Similarity=0.138  Sum_probs=57.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .+++++|+|++++||..+++.+...|++|++++++   .+.+... ++       .+..   ..+|.++.+++.+.+.++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~---~~~~~~~-~~-------~g~~---~~~d~~~~~~~~~~~~~~  210 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGS---DEKIAYL-KQ-------IGFD---AAFNYKTVNSLEEALKKA  210 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESS---HHHHHHH-HH-------TTCS---EEEETTSCSCHHHHHHHH
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCC---HHHHHHH-Hh-------cCCc---EEEecCCHHHHHHHHHHH
Confidence            57899999999999999999999999999999885   2222222 22       2221   235877745555555554


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                      ..  +.+|++|+|+|.
T Consensus       211 ~~--~~~d~vi~~~g~  224 (333)
T 1v3u_A          211 SP--DGYDCYFDNVGG  224 (333)
T ss_dssp             CT--TCEEEEEESSCH
T ss_pred             hC--CCCeEEEECCCh
Confidence            33  479999999984

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.57  E-value=2.9e-07  Score=64.08  Aligned_cols=80  Identities=18%  Similarity=0.189  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .+++++|+|+++|||..+++.+...|++|++++++   .+... .   ...    .+..   ..+|..+.+..+.+.+..
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~---~~~~~-~---~~~----~g~~---~~~d~~~~~~~~~~~~~~  103 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGS---DAKRE-M---LSR----LGVE---YVGDSRSVDFADEILELT  103 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESS---HHHHH-H---HHT----TCCS---EEEETTCSTHHHHHHHHT
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCC---HHHHH-H---HHH----cCCC---EEeeCCcHHHHHHHHHHh
Confidence            57899999999999999999999999999999885   22221 1   121    2222   225777665444433322


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                       . .+.+|++|+|+|.
T Consensus       104 -~-~~~~D~vi~~~g~  117 (198)
T 1pqw_A          104 -D-GYGVDVVLNSLAG  117 (198)
T ss_dssp             -T-TCCEEEEEECCCT
T ss_pred             -C-CCCCeEEEECCch
Confidence             1 1369999999984

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.52  E-value=4e-07  Score=71.43  Aligned_cols=78  Identities=18%  Similarity=0.204  Sum_probs=56.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .+++++|+| ++++|..+++.|++.|++|++++|+   ...+.    .+..    ....+..+.+|+++.+++.+++.  
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~---~~~a~----~la~----~~~~~~~~~~Dv~d~~~l~~~l~--   67 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRT---LESAK----KLSA----GVQHSTPISLDVNDDAALDAEVA--   67 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESS---HHHHH----HTTT----TCTTEEEEECCTTCHHHHHHHHT--
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECC---HHHHH----HHHH----hcCCceEEEeecCCHHHHHHHHc--
Confidence            467899998 7999999999999999999999986   22222    1211    11235577889999887766553  


Q ss_pred             HHhcCCccEEEeCCcCC
Q 044851          119 VNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~  135 (149)
                           .+|+||||++..
T Consensus        68 -----~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 -----KHDLVISLIPYT   79 (450)
T ss_dssp             -----TSSEEEECCC--
T ss_pred             -----CCcEEEECCccc
Confidence                 589999999864

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.50  E-value=8e-08  Score=71.10  Aligned_cols=81  Identities=16%  Similarity=0.213  Sum_probs=54.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|+++|+|++ |+|+++++.|++.| +|++++|+   .+.+.+..+++...   .... ..+.+|+.+.        
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~---~~~~~~l~~~~~~~---~~~~-~~~~~d~~~~--------  187 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRT---VEKAEALAKEIAEK---LNKK-FGEEVKFSGL--------  187 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSS---HHHHHHHHHHHHHH---HTCC-HHHHEEEECT--------
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECC---HHHHHHHHHHHhhh---cccc-cceeEEEeeH--------
Confidence            3678999999997 99999999999999 99999986   33333444333220   0001 0122454431        


Q ss_pred             HHHHhcCCccEEEeCCcCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~  136 (149)
                        .+.++++|+||||+|...
T Consensus       188 --~~~~~~~DilVn~ag~~~  205 (287)
T 1nvt_A          188 --DVDLDGVDIIINATPIGM  205 (287)
T ss_dssp             --TCCCTTCCEEEECSCTTC
T ss_pred             --HHhhCCCCEEEECCCCCC
Confidence              344578999999999754

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=98.48  E-value=3.4e-07  Score=72.79  Aligned_cols=67  Identities=22%  Similarity=0.161  Sum_probs=50.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      ++++|||||+|.||..+++.|++.|++|++++|+....                     ..+.+|+.+..         .
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~---------------------~~v~~d~~~~~---------~  196 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP---------------------GKRFWDPLNPA---------S  196 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT---------------------TCEECCTTSCC---------T
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc---------------------cceeecccchh---------H
Confidence            56899999999999999999999999999999974321                     12556766431         2


Q ss_pred             HhcCCccEEEeCCcCCC
Q 044851          120 NAYDRIDILVNNAAEQY  136 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~  136 (149)
                      +.+..+|+|||+||...
T Consensus       197 ~~l~~~D~Vih~A~~~~  213 (516)
T 3oh8_A          197 DLLDGADVLVHLAGEPI  213 (516)
T ss_dssp             TTTTTCSEEEECCCC--
T ss_pred             HhcCCCCEEEECCCCcc
Confidence            23357999999999854

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.46  E-value=8.2e-07  Score=67.07  Aligned_cols=80  Identities=13%  Similarity=0.128  Sum_probs=58.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .+++++|+|++++||..+++.+...|++|++++++....    +..++       .+..   ..+|+++.+++.+.+.++
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~----~~~~~-------~g~~---~~~d~~~~~~~~~~~~~~  234 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE----ELFRS-------IGGE---VFIDFTKEKDIVGAVLKA  234 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHH----HHHHH-------TTCC---EEEETTTCSCHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHH----HHHHH-------cCCc---eEEecCccHhHHHHHHHH
Confidence            578999999999999999999999999999999864322    12221       2222   224887656666666665


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                      ...  .+|++|+|+|.
T Consensus       235 ~~~--~~D~vi~~~g~  248 (347)
T 2hcy_A          235 TDG--GAHGVINVSVS  248 (347)
T ss_dssp             HTS--CEEEEEECSSC
T ss_pred             hCC--CCCEEEECCCc
Confidence            443  69999999985

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.38  E-value=4.7e-06  Score=62.52  Aligned_cols=86  Identities=19%  Similarity=0.225  Sum_probs=59.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      .+++|+++|+|+ +|+|++++..|++.|+ +|+++.|+....+.+++..+++...   .+  ..+...++.+.+++.+.+
T Consensus       151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~---~~--~~~~~~~~~~~~~l~~~l  224 (315)
T 3tnl_A          151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSK---TD--CKAQLFDIEDHEQLRKEI  224 (315)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH---SS--CEEEEEETTCHHHHHHHH
T ss_pred             CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhh---cC--CceEEeccchHHHHHhhh
Confidence            468999999998 6999999999999999 6999999743344555555555431   11  233345666654443322


Q ss_pred             HHHHHhcCCccEEEeCCcCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~  135 (149)
                      .       ..|+|||+....
T Consensus       225 ~-------~aDiIINaTp~G  237 (315)
T 3tnl_A          225 A-------ESVIFTNATGVG  237 (315)
T ss_dssp             H-------TCSEEEECSSTT
T ss_pred             c-------CCCEEEECccCC
Confidence            2       579999988653

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.33  E-value=2.1e-06  Score=56.19  Aligned_cols=77  Identities=9%  Similarity=0.135  Sum_probs=52.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      ++++.++|+|+ |.+|..+++.|.+.|++|++++++   ....    +.+.      .....++.+|.++.+.+..+   
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~---~~~~----~~~~------~~~~~~~~~d~~~~~~l~~~---   66 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDIN---EEKV----NAYA------SYATHAVIANATEENELLSL---   66 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESC---HHHH----HTTT------TTCSEEEECCTTCHHHHHTT---
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC---HHHH----HHHH------HhCCEEEEeCCCCHHHHHhc---
Confidence            34567999998 999999999999999999999886   2211    1111      11235667888876543322   


Q ss_pred             HHHhcCCccEEEeCCcC
Q 044851          118 VVNAYDRIDILVNNAAE  134 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~  134 (149)
                         .....|++|++++.
T Consensus        67 ---~~~~~d~vi~~~~~   80 (144)
T 2hmt_A           67 ---GIRNFEYVIVAIGA   80 (144)
T ss_dssp             ---TGGGCSEEEECCCS
T ss_pred             ---CCCCCCEEEECCCC
Confidence               23468999998875

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.29  E-value=3.7e-06  Score=66.28  Aligned_cols=79  Identities=18%  Similarity=0.200  Sum_probs=56.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHc-CCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQE-GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      .+.+++++|+|+ |++|..+++.|++. |++|++++|+   .+.+.+.    ..    . ..+.++.+|+.+.+++.+++
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~---~~ka~~l----a~----~-~~~~~~~~D~~d~~~l~~~l   86 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRT---LANAQAL----AK----P-SGSKAISLDVTDDSALDKVL   86 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESS---HHHHHHH----HG----G-GTCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECC---HHHHHHH----HH----h-cCCcEEEEecCCHHHHHHHH
Confidence            466788999997 99999999999998 6789999986   3333222    22    1 12456778999887766655


Q ss_pred             HHHHHhcCCccEEEeCCcCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~  135 (149)
                      .       .+|+|||+++..
T Consensus        87 ~-------~~DvVIn~tp~~   99 (467)
T 2axq_A           87 A-------DNDVVISLIPYT   99 (467)
T ss_dssp             H-------TSSEEEECSCGG
T ss_pred             c-------CCCEEEECCchh
Confidence            3       589999999864

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=98.27  E-value=2.1e-06  Score=65.09  Aligned_cols=31  Identities=10%  Similarity=0.088  Sum_probs=27.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-cEEEEec
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGA-TVAFTYV   72 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~   72 (149)
                      +++||||+|.||..++++|++.|+ .|+.+++
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~   33 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHR   33 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECC
Confidence            599999999999999999999998 7776665

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.26  E-value=4e-06  Score=61.48  Aligned_cols=78  Identities=15%  Similarity=0.235  Sum_probs=52.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+++++|+|+ +|+|+++++.|++.|++|+++.|+   .+.+.+..+++..    .+ .  +...|+   +++     
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~---~~~~~~la~~~~~----~~-~--~~~~~~---~~~-----  176 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRT---VSRAEELAKLFAH----TG-S--IQALSM---DEL-----  176 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS---HHHHHHHHHHTGG----GS-S--EEECCS---GGG-----
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECC---HHHHHHHHHHhhc----cC-C--eeEecH---HHh-----
Confidence            357889999998 699999999999999999999986   3333333333221    11 1  111232   221     


Q ss_pred             HHHHhcCCccEEEeCCcCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~  137 (149)
                        .+  +..|+||||++....
T Consensus       177 --~~--~~~DivVn~t~~~~~  193 (271)
T 1nyt_A          177 --EG--HEFDLIINATSSGIS  193 (271)
T ss_dssp             --TT--CCCSEEEECCSCGGG
T ss_pred             --cc--CCCCEEEECCCCCCC
Confidence              11  579999999997543

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.25  E-value=3e-06  Score=63.37  Aligned_cols=79  Identities=11%  Similarity=0.121  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .+++++|+|++++||..+++.+...|++|++++++   .+.+. ...++       +..   ..+|..+.+..+.+.+..
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~---~~~~~-~~~~~-------g~~---~~~~~~~~~~~~~~~~~~  205 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGT---AQKAQ-SALKA-------GAW---QVINYREEDLVERLKEIT  205 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESS---HHHHH-HHHHH-------TCS---EEEETTTSCHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC---HHHHH-HHHHc-------CCC---EEEECCCccHHHHHHHHh
Confidence            57899999999999999999999999999999886   22222 22221       111   224776655444433322


Q ss_pred             HHhcCCccEEEeCCc
Q 044851          119 VNAYDRIDILVNNAA  133 (149)
Q Consensus       119 ~~~~g~id~li~~ag  133 (149)
                       . ...+|++|+|+|
T Consensus       206 -~-~~~~D~vi~~~g  218 (327)
T 1qor_A          206 -G-GKKVRVVYDSVG  218 (327)
T ss_dssp             -T-TCCEEEEEECSC
T ss_pred             -C-CCCceEEEECCc
Confidence             1 125999999998

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.25  E-value=1.7e-06  Score=65.22  Aligned_cols=81  Identities=15%  Similarity=0.154  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .|++++|+|++++||..+++.+...|++|++++++   .+.+..    +...   .+..   ..+|..+.+++...+.++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~---~~~~~~----~~~~---~g~~---~~~d~~~~~~~~~~~~~~  221 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGS---KEKVDL----LKTK---FGFD---DAFNYKEESDLTAALKRC  221 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS---HHHHHH----HHHT---SCCS---EEEETTSCSCSHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHH----HHHH---cCCc---eEEecCCHHHHHHHHHHH
Confidence            57899999999999999999999999999999886   222211    2110   2222   224776654455555544


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                      ..  +.+|++|+|+|.
T Consensus       222 ~~--~~~d~vi~~~g~  235 (345)
T 2j3h_A          222 FP--NGIDIYFENVGG  235 (345)
T ss_dssp             CT--TCEEEEEESSCH
T ss_pred             hC--CCCcEEEECCCH
Confidence            32  469999999985

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.24  E-value=6.6e-06  Score=54.06  Aligned_cols=74  Identities=14%  Similarity=0.179  Sum_probs=53.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      .+.++|+|+ |.+|..+++.|.+.|++|+++++++   +.+    +.+..    .  ...++.+|.++++.+..+     
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~---~~~----~~~~~----~--~~~~~~gd~~~~~~l~~~-----   66 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSK---EKI----ELLED----E--GFDAVIADPTDESFYRSL-----   66 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCH---HHH----HHHHH----T--TCEEEECCTTCHHHHHHS-----
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCH---HHH----HHHHH----C--CCcEEECCCCCHHHHHhC-----
Confidence            356999998 6799999999999999999999862   222    22222    2  246778899988755432     


Q ss_pred             HhcCCccEEEeCCc
Q 044851          120 NAYDRIDILVNNAA  133 (149)
Q Consensus       120 ~~~g~id~li~~ag  133 (149)
                       .....|++|.+.+
T Consensus        67 -~~~~~d~vi~~~~   79 (141)
T 3llv_A           67 -DLEGVSAVLITGS   79 (141)
T ss_dssp             -CCTTCSEEEECCS
T ss_pred             -CcccCCEEEEecC
Confidence             2346788888776

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.24  E-value=4.1e-06  Score=62.86  Aligned_cols=80  Identities=18%  Similarity=0.218  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .+++++|+|++++||..+++.+...|++|++++++   .+.+. ..+++       +..   ..+|..+.+..+.+.+..
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~---~~~~~-~~~~~-------g~~---~~~d~~~~~~~~~i~~~~  210 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVST---EEKAE-TARKL-------GCH---HTINYSTQDFAEVVREIT  210 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESS---HHHHH-HHHHH-------TCS---EEEETTTSCHHHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC---HHHHH-HHHHc-------CCC---EEEECCCHHHHHHHHHHh
Confidence            57899999999999999999999999999999986   22222 22222       211   224776655444433322


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                       . ...+|++|+|+|.
T Consensus       211 -~-~~~~d~vi~~~g~  224 (333)
T 1wly_A          211 -G-GKGVDVVYDSIGK  224 (333)
T ss_dssp             -T-TCCEEEEEECSCT
T ss_pred             -C-CCCCeEEEECCcH
Confidence             1 1369999999985

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.24  E-value=2.5e-06  Score=68.06  Aligned_cols=35  Identities=26%  Similarity=0.395  Sum_probs=28.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      +.+|+++|||+ +|+|+++++.|++.|++|+++.|+
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~  396 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRT  396 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESS
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECC
Confidence            57889999999 499999999999999999999986

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.20  E-value=1.1e-05  Score=61.05  Aligned_cols=80  Identities=20%  Similarity=0.239  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .+++++|+|++++||..+++.+...|++|++++++   .+.+. ..+   .    .+..   ..+|..+.+..+.+.+..
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~---~~~~~-~~~---~----~ga~---~~~d~~~~~~~~~~~~~~  235 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGT---EEGQK-IVL---Q----NGAH---EVFNHREVNYIDKIKKYV  235 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS---HHHHH-HHH---H----TTCS---EEEETTSTTHHHHHHHHH
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC---hhHHH-HHH---H----cCCC---EEEeCCCchHHHHHHHHc
Confidence            57899999999999999999999999999999886   22222 222   1    2222   225766654333332222


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                       . ...+|++|+|+|.
T Consensus       236 -~-~~~~D~vi~~~G~  249 (351)
T 1yb5_A          236 -G-EKGIDIIIEMLAN  249 (351)
T ss_dssp             -C-TTCEEEEEESCHH
T ss_pred             -C-CCCcEEEEECCCh
Confidence             1 1269999999984

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.19  E-value=5.1e-06  Score=62.35  Aligned_cols=80  Identities=15%  Similarity=0.170  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .|++++|+|++++||...++.+...|++|++++++   .+.+....+   .    .+..   ..+|..+.+..+.+. ++
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~---~----~g~~---~~~~~~~~~~~~~~~-~~  214 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGG---AEKCRFLVE---E----LGFD---GAIDYKNEDLAAGLK-RE  214 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHH---T----TCCS---EEEETTTSCHHHHHH-HH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHH---H----cCCC---EEEECCCHHHHHHHH-Hh
Confidence            57899999999999999999999999999999886   222221111   1    2221   224666644333332 22


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                      .  .+.+|++|+|+|.
T Consensus       215 ~--~~~~d~vi~~~g~  228 (336)
T 4b7c_A          215 C--PKGIDVFFDNVGG  228 (336)
T ss_dssp             C--TTCEEEEEESSCH
T ss_pred             c--CCCceEEEECCCc
Confidence            2  2469999999984

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.18  E-value=6.5e-06  Score=62.36  Aligned_cols=80  Identities=16%  Similarity=0.177  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .|++++|+|++++||..+++.+...|++|++++++.   +.+. ..+++       +..   ..+|..+.+..+.+.+..
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~---~~~~-~~~~~-------g~~---~~~~~~~~~~~~~~~~~~  227 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQ---KKLQ-MAEKL-------GAA---AGFNYKKEDFSEATLKFT  227 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHH-HHHHH-------TCS---EEEETTTSCHHHHHHHHT
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCH---HHHH-HHHHc-------CCc---EEEecCChHHHHHHHHHh
Confidence            578999999999999999999999999999999862   2222 22222       221   225666654333333221


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                       . ...+|++|+|+|.
T Consensus       228 -~-~~~~d~vi~~~G~  241 (354)
T 2j8z_A          228 -K-GAGVNLILDCIGG  241 (354)
T ss_dssp             -T-TSCEEEEEESSCG
T ss_pred             -c-CCCceEEEECCCc
Confidence             1 1369999999985

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.17  E-value=6.7e-06  Score=62.81  Aligned_cols=78  Identities=17%  Similarity=0.189  Sum_probs=55.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+++++|+|+ |+||..+++.+...|++|++++++.   ..+....+.       .+..   +.+|+++.+++.+++.
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~---~~~~~~~~~-------~g~~---~~~~~~~~~~l~~~~~  228 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNH---KRLQYLDDV-------FGGR---VITLTATEANIKKSVQ  228 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHH-------TTTS---EEEEECCHHHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCH---HHHHHHHHh-------cCce---EEEecCCHHHHHHHHh
Confidence            367889999999 8999999999999999999999863   222222111       1222   4567777776665543


Q ss_pred             HHHHhcCCccEEEeCCcCC
Q 044851          117 EVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~  135 (149)
                             ..|++|++++..
T Consensus       229 -------~~DvVi~~~g~~  240 (369)
T 2eez_A          229 -------HADLLIGAVLVP  240 (369)
T ss_dssp             -------HCSEEEECCC--
T ss_pred             -------CCCEEEECCCCC
Confidence                   479999999864

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.17  E-value=4e-06  Score=63.50  Aligned_cols=78  Identities=13%  Similarity=0.087  Sum_probs=51.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      ++++|+|++++||..+++.+...|+ +|++++++   .+.+...    .+.   .+..   ..+|..+.+ +.+.+.++.
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~---~~~~~~~----~~~---~g~~---~~~d~~~~~-~~~~~~~~~  227 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGT---HEKCILL----TSE---LGFD---AAINYKKDN-VAEQLRESC  227 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESC---HHHHHHH----HHT---SCCS---EEEETTTSC-HHHHHHHHC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCC---HHHHHHH----HHH---cCCc---eEEecCchH-HHHHHHHhc
Confidence            8999999999999999999999999 89999886   2222211    110   1221   235776643 323333322


Q ss_pred             HhcCCccEEEeCCcC
Q 044851          120 NAYDRIDILVNNAAE  134 (149)
Q Consensus       120 ~~~g~id~li~~ag~  134 (149)
                      .  +.+|++|+|+|.
T Consensus       228 ~--~~~d~vi~~~G~  240 (357)
T 2zb4_A          228 P--AGVDVYFDNVGG  240 (357)
T ss_dssp             T--TCEEEEEESCCH
T ss_pred             C--CCCCEEEECCCH
Confidence            2  269999999984

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.08  E-value=1.6e-05  Score=60.02  Aligned_cols=81  Identities=15%  Similarity=0.254  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQE-GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .+++++|+|++++||..+++.+... |++|++++++.   +.+ +..+++       +..   ..+|..+.+..+. +.+
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~---~~~-~~~~~~-------g~~---~~~~~~~~~~~~~-~~~  234 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVRE---EAV-EAAKRA-------GAD---YVINASMQDPLAE-IRR  234 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSH---HHH-HHHHHH-------TCS---EEEETTTSCHHHH-HHH
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCH---HHH-HHHHHh-------CCC---EEecCCCccHHHH-HHH
Confidence            5789999999999999999999999 99999998862   222 222222       221   1246665443322 222


Q ss_pred             HHHhcCCccEEEeCCcCC
Q 044851          118 VVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~  135 (149)
                      +... +.+|++|+|+|..
T Consensus       235 ~~~~-~~~d~vi~~~g~~  251 (347)
T 1jvb_A          235 ITES-KGVDAVIDLNNSE  251 (347)
T ss_dssp             HTTT-SCEEEEEESCCCH
T ss_pred             HhcC-CCceEEEECCCCH
Confidence            2211 4799999999853

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.06  E-value=5.8e-05  Score=56.50  Aligned_cols=86  Identities=20%  Similarity=0.202  Sum_probs=56.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      .+++|+++|+|+ ||.|++++..|.+.|+ +|+++.|+....+.+++..+++...   .+  ..+...+..+.+.....+
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~---~~--~~v~~~~~~~l~~~~~~l  218 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNEN---TD--CVVTVTDLADQHAFTEAL  218 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHH---SS--CEEEEEETTCHHHHHHHH
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhc---cC--cceEEechHhhhhhHhhc
Confidence            467899999997 8999999999999998 6999999744344455555555431   11  223334555432222222


Q ss_pred             HHHHHhcCCccEEEeCCcCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~  135 (149)
                      .       ..|+|||+....
T Consensus       219 ~-------~~DiIINaTp~G  231 (312)
T 3t4e_A          219 A-------SADILTNGTKVG  231 (312)
T ss_dssp             H-------HCSEEEECSSTT
T ss_pred             c-------CceEEEECCcCC
Confidence            1       369999987654

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.06  E-value=2.8e-05  Score=58.82  Aligned_cols=79  Identities=22%  Similarity=0.252  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .+++++|+||+++||...++.+...|++|++++++.   +.+ +..+++       +..   ..+|..+.+..+.+ .++
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~---~~~-~~~~~l-------Ga~---~~~~~~~~~~~~~~-~~~  231 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGST---GKC-EACERL-------GAK---RGINYRSEDFAAVI-KAE  231 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH---HHH-HHHHHH-------TCS---EEEETTTSCHHHHH-HHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCH---HHH-HHHHhc-------CCC---EEEeCCchHHHHHH-HHH
Confidence            578999999999999999999999999999999862   222 222222       221   12466554433333 333


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                      .  .+.+|++|+|+|.
T Consensus       232 ~--~~g~Dvvid~~g~  245 (353)
T 4dup_A          232 T--GQGVDIILDMIGA  245 (353)
T ss_dssp             H--SSCEEEEEESCCG
T ss_pred             h--CCCceEEEECCCH
Confidence            2  3469999999985

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.01  E-value=7.7e-05  Score=55.08  Aligned_cols=80  Identities=15%  Similarity=0.228  Sum_probs=52.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      .+++|+++|+|+ +|+|++++..|++.|+ +|+++.|+   .+.+++..+++..    ....+.+...+..+   +...+
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~---~~~a~~la~~~~~----~~~~~~i~~~~~~~---l~~~l  192 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLD---TSRAQALADVINN----AVGREAVVGVDARG---IEDVI  192 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSS---HHHHHHHHHHHHH----HHTSCCEEEECSTT---HHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECC---HHHHHHHHHHHHh----hcCCceEEEcCHHH---HHHHH
Confidence            367899999998 7999999999999999 59999987   3344444444432    11112233334322   32322


Q ss_pred             HHHHHhcCCccEEEeCCcC
Q 044851          116 DEVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~  134 (149)
                      .       ..|+|||+...
T Consensus       193 ~-------~~DiVInaTp~  204 (283)
T 3jyo_A          193 A-------AADGVVNATPM  204 (283)
T ss_dssp             H-------HSSEEEECSST
T ss_pred             h-------cCCEEEECCCC
Confidence            2       36999998865

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.97  E-value=2.3e-05  Score=58.90  Aligned_cols=80  Identities=16%  Similarity=0.072  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .|++++|+|+++++|...++.+...|++|++++++..+.+.+    .++       +.. .  .+|..+.+..+.+ .++
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~l-------ga~-~--~~~~~~~~~~~~~-~~~  208 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEEL----LRL-------GAA-Y--VIDTSTAPLYETV-MEL  208 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHH----HHH-------TCS-E--EEETTTSCHHHHH-HHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HhC-------CCc-E--EEeCCcccHHHHH-HHH
Confidence            578999999999999999999888999999999875443322    222       221 1  2355554333222 222


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                      .. ...+|++|+|+|.
T Consensus       209 ~~-~~g~Dvvid~~g~  223 (340)
T 3gms_A          209 TN-GIGADAAIDSIGG  223 (340)
T ss_dssp             TT-TSCEEEEEESSCH
T ss_pred             hC-CCCCcEEEECCCC
Confidence            11 1269999999984

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.97  E-value=4.4e-05  Score=59.47  Aligned_cols=85  Identities=14%  Similarity=0.207  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEE--ecCC---------C
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS--ADLG---------F  107 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~Dv~---------~  107 (149)
                      .|++++|+|++++||...++.+...|++|+++.++   .+.+. .+++       .+....+-.  .|+.         +
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~---~~~~~-~~~~-------lGa~~~i~~~~~~~~~~~~~~~~~~  288 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSS---AQKEA-AVRA-------LGCDLVINRAELGITDDIADDPRRV  288 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS---HHHHH-HHHH-------TTCCCEEEHHHHTCCTTGGGCHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC---HHHHH-HHHh-------cCCCEEEeccccccccccccccccc
Confidence            57899999999999999999999999999988875   22222 2222       233222211  1221         1


Q ss_pred             hHHHHHHHHHHHHhcC-CccEEEeCCcC
Q 044851          108 DENCKRVVDEVVNAYD-RIDILVNNAAE  134 (149)
Q Consensus       108 ~~~v~~~~~~~~~~~g-~id~li~~ag~  134 (149)
                      .+++..+.+.+.+..+ .+|++|+|+|.
T Consensus       289 ~~~~~~~~~~v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          289 VETGRKLAKLVVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             HHHHHHHHHHHHHHHSSCCSEEEECSCH
T ss_pred             chhhhHHHHHHHHHhCCCceEEEECCCc
Confidence            2334445555555444 69999999985

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.92  E-value=2.8e-05  Score=58.52  Aligned_cols=79  Identities=19%  Similarity=0.179  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .+++++|+|+++++|..+++.+...|++|++++++.   +.+. ..+++       +.. .  .+|..+.+ +.+.+.++
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~---~~~~-~~~~~-------ga~-~--~~d~~~~~-~~~~~~~~  230 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSE---DKLR-RAKAL-------GAD-E--TVNYTHPD-WPKEVRRL  230 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSH---HHHH-HHHHH-------TCS-E--EEETTSTT-HHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH---HHHH-HHHhc-------CCC-E--EEcCCccc-HHHHHHHH
Confidence            578999999999999999999999999999998862   2222 22222       211 1  24776643 22223222


Q ss_pred             HHhcCCccEEEeCCc
Q 044851          119 VNAYDRIDILVNNAA  133 (149)
Q Consensus       119 ~~~~g~id~li~~ag  133 (149)
                      .. ...+|++|+|+|
T Consensus       231 ~~-~~~~d~vi~~~g  244 (343)
T 2eih_A          231 TG-GKGADKVVDHTG  244 (343)
T ss_dssp             TT-TTCEEEEEESSC
T ss_pred             hC-CCCceEEEECCC
Confidence            21 136999999998

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.91  E-value=3.9e-05  Score=57.77  Aligned_cols=79  Identities=23%  Similarity=0.328  Sum_probs=50.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .|++++|+|++++||...++.+...|++|++++++..+.+    ..+++       +.. .+  .|..  +++.+.+.++
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~----~~~~~-------ga~-~v--~~~~--~~~~~~v~~~  222 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATE----FVKSV-------GAD-IV--LPLE--EGWAKAVREA  222 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHH----HHHHH-------TCS-EE--EESS--TTHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHHhc-------CCc-EE--ecCc--hhHHHHHHHH
Confidence            5789999999999999999999999999999998643322    22222       221 12  2443  2233333322


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                      ... ..+|++|+|+|.
T Consensus       223 ~~~-~g~Dvvid~~g~  237 (342)
T 4eye_A          223 TGG-AGVDMVVDPIGG  237 (342)
T ss_dssp             TTT-SCEEEEEESCC-
T ss_pred             hCC-CCceEEEECCch
Confidence            111 259999999985

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.88  E-value=8.1e-05  Score=55.66  Aligned_cols=99  Identities=20%  Similarity=0.211  Sum_probs=60.8

Q ss_pred             CCCCE-EEEecCCC-----------------h-HHHHHHHHHHHcCCcEEEEecCCCChHH-----HHHHHHHHHhccCC
Q 044851           38 LRGMV-ALVTGGDS-----------------G-IGRAVCHCFAQEGATVAFTYVKPQEDKD-----AKETLEMLREAKTP   93 (149)
Q Consensus        38 ~~~~~-~litG~s~-----------------g-ig~~~a~~L~~~g~~Vi~~~~~~~~~~~-----~~~~~~~~~~~~~~   93 (149)
                      +.||. +|||+|..                 | .|.++|+.++..|+.|+++.+.......     ....++.+.. ...
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~-~~~  112 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRP-SGP  112 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEE-CCC
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhcc-ccc
Confidence            56777 99996654                 5 9999999999999999998875322110     0001111100 000


Q ss_pred             CCCCceEEEecCCChHHHHHHHHHH------------------------------HHhcCCccEEEeCCcCCCC
Q 044851           94 DAKDPMAISADLGFDENCKRVVDEV------------------------------VNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus        94 ~~~~~~~~~~Dv~~~~~v~~~~~~~------------------------------~~~~g~id~li~~ag~~~~  137 (149)
                      ....+..+.+|+....++..++...                              .+.++..|++|.+|++...
T Consensus       113 ~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf  186 (313)
T 1p9o_A          113 ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDF  186 (313)
T ss_dssp             -CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSE
T ss_pred             cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhc
Confidence            1122345566777666666555443                              2445779999999999775

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.88  E-value=4.8e-05  Score=56.82  Aligned_cols=80  Identities=19%  Similarity=0.315  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .|++++|+|+++++|...++.+...|++|++++++.   +.+. ..+++       +.. .  ..|..+.+..+.+.+..
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~---~~~~-~~~~~-------Ga~-~--~~~~~~~~~~~~~~~~~  205 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSP---EKAA-HAKAL-------GAW-E--TIDYSHEDVAKRVLELT  205 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSH---HHHH-HHHHH-------TCS-E--EEETTTSCHHHHHHHHT
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHH-HHHHc-------CCC-E--EEeCCCccHHHHHHHHh
Confidence            578999999999999999999999999999998862   2222 22222       221 1  24555544333322221


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                       . ...+|++|+|+|.
T Consensus       206 -~-~~g~Dvvid~~g~  219 (325)
T 3jyn_A          206 -D-GKKCPVVYDGVGQ  219 (325)
T ss_dssp             -T-TCCEEEEEESSCG
T ss_pred             -C-CCCceEEEECCCh
Confidence             1 1269999999985

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.86  E-value=4.3e-05  Score=57.24  Aligned_cols=80  Identities=14%  Similarity=0.204  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .|++++|+|++++||...++.+...|++|++++++   .+.+. ..++       .+..   ..+|..+.+..+.+. ++
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~---~~~~~-~~~~-------~ga~---~~~~~~~~~~~~~~~-~~  212 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAST---DEKLK-IAKE-------YGAE---YLINASKEDILRQVL-KF  212 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS---HHHHH-HHHH-------TTCS---EEEETTTSCHHHHHH-HH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHH-HHHH-------cCCc---EEEeCCCchHHHHHH-HH
Confidence            57899999999999999999999999999999885   22222 2222       2222   124555543333322 22


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                      .. ...+|++|+|+|.
T Consensus       213 ~~-~~g~D~vid~~g~  227 (334)
T 3qwb_A          213 TN-GKGVDASFDSVGK  227 (334)
T ss_dssp             TT-TSCEEEEEECCGG
T ss_pred             hC-CCCceEEEECCCh
Confidence            11 1259999999985

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.85  E-value=0.00016  Score=48.11  Aligned_cols=78  Identities=21%  Similarity=0.175  Sum_probs=50.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      ++.++|.|+ |.+|..+++.|.+.|+.|+++++++  .+... .+....      ...+.++..|.++++.+..+     
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~--~~~~~-~~~~~~------~~~~~~i~gd~~~~~~l~~a-----   67 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLP--EDDIK-QLEQRL------GDNADVIPGDSNDSSVLKKA-----   67 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC--HHHHH-HHHHHH------CTTCEEEESCTTSHHHHHHH-----
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCC--hHHHH-HHHHhh------cCCCeEEEcCCCCHHHHHHc-----
Confidence            455888886 8999999999999999999999862  11111 111111      12356777888876643322     


Q ss_pred             HhcCCccEEEeCCc
Q 044851          120 NAYDRIDILVNNAA  133 (149)
Q Consensus       120 ~~~g~id~li~~ag  133 (149)
                       .....|.+|.+.+
T Consensus        68 -~i~~ad~vi~~~~   80 (153)
T 1id1_A           68 -GIDRCRAILALSD   80 (153)
T ss_dssp             -TTTTCSEEEECSS
T ss_pred             -ChhhCCEEEEecC
Confidence             1235677776654

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.84  E-value=0.00011  Score=55.38  Aligned_cols=79  Identities=14%  Similarity=0.161  Sum_probs=51.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +++++|+||++++|...++.+...|++|++++++..+.+    .++++       +.. .  .+|..+.+ +.+.+.++.
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~----~~~~~-------Ga~-~--~~~~~~~~-~~~~v~~~~  229 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIA----LLKDI-------GAA-H--VLNEKAPD-FEATLREVM  229 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHH----HHHHH-------TCS-E--EEETTSTT-HHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHHc-------CCC-E--EEECCcHH-HHHHHHHHh
Confidence            379999999999999999999999999999998643322    22222       221 1  23555533 333333332


Q ss_pred             HhcCCccEEEeCCcC
Q 044851          120 NAYDRIDILVNNAAE  134 (149)
Q Consensus       120 ~~~g~id~li~~ag~  134 (149)
                      .. ..+|++|+|+|.
T Consensus       230 ~~-~g~D~vid~~g~  243 (349)
T 3pi7_A          230 KA-EQPRIFLDAVTG  243 (349)
T ss_dssp             HH-HCCCEEEESSCH
T ss_pred             cC-CCCcEEEECCCC
Confidence            22 259999999884

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.78  E-value=8.9e-05  Score=54.26  Aligned_cols=77  Identities=13%  Similarity=0.166  Sum_probs=50.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++++++|+|+ ||+|++++..|++.|++|+++.|+   .+.+++..+.+..    .+ .+.  .+|+   +++.    
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~---~~~a~~l~~~~~~----~~-~~~--~~~~---~~~~----  177 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRT---FSKTKELAERFQP----YG-NIQ--AVSM---DSIP----  177 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESS---HHHHHHHHHHHGG----GS-CEE--EEEG---GGCC----
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHccc----cC-CeE--EeeH---HHhc----
Confidence            357889999998 799999999999999889999997   3334444443322    11 121  2332   1110    


Q ss_pred             HHHHhcCCccEEEeCCcCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~  136 (149)
                         +  +..|+|||+++...
T Consensus       178 ---~--~~~DivIn~t~~~~  192 (272)
T 1p77_A          178 ---L--QTYDLVINATSAGL  192 (272)
T ss_dssp             ---C--SCCSEEEECCCC--
T ss_pred             ---c--CCCCEEEECCCCCC
Confidence               1  47899999998754

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=97.77  E-value=3.6e-05  Score=56.46  Aligned_cols=35  Identities=31%  Similarity=0.435  Sum_probs=32.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQE   76 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~   76 (149)
                      .+|||||+|.||..++++|.++|++|+++.|++..
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~   36 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP   36 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence            49999999999999999999999999999997653

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.77  E-value=6.3e-05  Score=57.12  Aligned_cols=79  Identities=14%  Similarity=0.231  Sum_probs=51.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      ++|++++|+|+ +++|...++.+...|++|++++++....+.+ +..+++       +  ...+  | .+ +-.+.+ .+
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-~~~~~~-------g--a~~v--~-~~-~~~~~~-~~  242 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQ-TVIEET-------K--TNYY--N-SS-NGYDKL-KD  242 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHH-HHHHHH-------T--CEEE--E-CT-TCSHHH-HH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHH-HHHHHh-------C--Ccee--c-hH-HHHHHH-HH
Confidence            45899999999 9999999999999999999999874111222 222222       2  2233  5 44 222222 22


Q ss_pred             HHHhcCCccEEEeCCcCC
Q 044851          118 VVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~  135 (149)
                       . . +.+|++|+++|..
T Consensus       243 -~-~-~~~d~vid~~g~~  257 (366)
T 2cdc_A          243 -S-V-GKFDVIIDATGAD  257 (366)
T ss_dssp             -H-H-CCEEEEEECCCCC
T ss_pred             -h-C-CCCCEEEECCCCh
Confidence             2 2 5799999999863

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.75  E-value=0.00032  Score=45.35  Aligned_cols=32  Identities=13%  Similarity=0.408  Sum_probs=28.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      +.++|+|+ |.+|..+++.|.+.|++|++++++
T Consensus         5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~   36 (140)
T 1lss_A            5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDID   36 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECC
Confidence            46889987 999999999999999999999886

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.74  E-value=0.00017  Score=48.07  Aligned_cols=37  Identities=11%  Similarity=0.186  Sum_probs=31.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      ..++.++|+|+ |.+|..+++.|.+.|++|+++++++.
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~   53 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEY   53 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHH
Confidence            35667999986 89999999999999999999998743

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=97.72  E-value=5e-05  Score=56.95  Aligned_cols=81  Identities=17%  Similarity=0.116  Sum_probs=51.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-------cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGA-------TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKR  113 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~-------~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  113 (149)
                      ..++||||+|.||..++..|+..|.       .|+++++... ..........+..    ....  ++ .|+.+..++..
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~-~~~~~g~~~dl~~----~~~~--~~-~di~~~~~~~~   76 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQA-MKALEGVVMELED----CAFP--LL-AGLEATDDPKV   76 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGG-HHHHHHHHHHHHT----TTCT--TE-EEEEEESCHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCc-hhhccchhhhhhc----cccc--cc-CCeEeccChHH
Confidence            3699999999999999999999886       6888887521 1112222222322    1111  22 46665444333


Q ss_pred             HHHHHHHhcCCccEEEeCCcCCC
Q 044851          114 VVDEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       114 ~~~~~~~~~g~id~li~~ag~~~  136 (149)
                      .+       ...|++||.||...
T Consensus        77 a~-------~~~D~Vih~Ag~~~   92 (327)
T 1y7t_A           77 AF-------KDADYALLVGAAPR   92 (327)
T ss_dssp             HT-------TTCSEEEECCCCCC
T ss_pred             Hh-------CCCCEEEECCCcCC
Confidence            32       35899999999854

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.70  E-value=0.0002  Score=55.94  Aligned_cols=84  Identities=18%  Similarity=0.233  Sum_probs=55.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEE---ec--------CCC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS---AD--------LGF  107 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~D--------v~~  107 (149)
                      .|.+++|+|+++++|...++.+...|++|+++.++   .+.+ +.++++       +... ++.   .|        ..+
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~---~~~~-~~~~~l-------Ga~~-vi~~~~~d~~~~~~~~~~~  295 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSS---PQKA-EICRAM-------GAEA-IIDRNAEGYRFWKDENTQD  295 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS---HHHH-HHHHHH-------TCCE-EEETTTTTCCSEEETTEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECC---HHHH-HHHHhh-------CCcE-EEecCcCcccccccccccc
Confidence            57899999999999999999988999999888865   2222 222322       2211 111   01        234


Q ss_pred             hHHHHHHHHHHHHhcC--CccEEEeCCcC
Q 044851          108 DENCKRVVDEVVNAYD--RIDILVNNAAE  134 (149)
Q Consensus       108 ~~~v~~~~~~~~~~~g--~id~li~~ag~  134 (149)
                      ..+++.+.+.+.+..+  .+|++|.++|.
T Consensus       296 ~~~~~~~~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          296 PKEWKRFGKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHHHHHHHHHHHTSCCEEEEEECSCH
T ss_pred             hHHHHHHHHHHHHHhCCCCCcEEEEcCCc
Confidence            4555666666665443  69999999984

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.66  E-value=0.0005  Score=45.05  Aligned_cols=72  Identities=14%  Similarity=0.132  Sum_probs=47.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      .++|.|+ |.+|..+++.|.+.|+.|+++++++   +.+.    .+..      ..+.++..|.++++.+..+      .
T Consensus         9 ~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~---~~~~----~~~~------~g~~~i~gd~~~~~~l~~a------~   68 (140)
T 3fwz_A            9 HALLVGY-GRVGSLLGEKLLASDIPLVVIETSR---TRVD----ELRE------RGVRAVLGNAANEEIMQLA------H   68 (140)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEESCH---HHHH----HHHH------TTCEEEESCTTSHHHHHHT------T
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEECCH---HHHH----HHHH------cCCCEEECCCCCHHHHHhc------C
Confidence            4888886 7899999999999999999999973   2222    2221      1245677788776643321      1


Q ss_pred             cCCccEEEeCCc
Q 044851          122 YDRIDILVNNAA  133 (149)
Q Consensus       122 ~g~id~li~~ag  133 (149)
                      ....|.+|.+.+
T Consensus        69 i~~ad~vi~~~~   80 (140)
T 3fwz_A           69 LECAKWLILTIP   80 (140)
T ss_dssp             GGGCSEEEECCS
T ss_pred             cccCCEEEEECC
Confidence            224677776654

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.65  E-value=0.00054  Score=51.40  Aligned_cols=77  Identities=16%  Similarity=0.181  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .+++++|+|+ +++|...++.+...|++|++++++   .+.+. ..++       .+..   ..+|..+.+ +.+.+.++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~---~~~~~-~~~~-------lGa~---~~~d~~~~~-~~~~~~~~  227 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIG---DEKLE-LAKE-------LGAD---LVVNPLKED-AAKFMKEK  227 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSC---HHHHH-HHHH-------TTCS---EEECTTTSC-HHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCC---HHHHH-HHHH-------CCCC---EEecCCCcc-HHHHHHHH
Confidence            4789999999 889999999999999999999886   22222 2221       2222   124666543 33333333


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                      .   +.+|++|+++|.
T Consensus       228 ~---~~~d~vid~~g~  240 (339)
T 1rjw_A          228 V---GGVHAAVVTAVS  240 (339)
T ss_dssp             H---SSEEEEEESSCC
T ss_pred             h---CCCCEEEECCCC
Confidence            2   579999999985

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.62  E-value=0.00033  Score=53.14  Aligned_cols=79  Identities=16%  Similarity=0.183  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .|++++|+|+++++|...++.+...|++|++++++   .+.+ +..++       .+.. .+  +|..+.+ +.+.+.+.
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~---~~~~-~~~~~-------~Ga~-~~--~~~~~~~-~~~~~~~~  227 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSS---DEKS-AFLKS-------LGCD-RP--INYKTEP-VGTVLKQE  227 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESS---HHHH-HHHHH-------TTCS-EE--EETTTSC-HHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECC---HHHH-HHHHH-------cCCc-EE--EecCChh-HHHHHHHh
Confidence            57899999999999999999999999999999885   2222 12221       2222 12  3554432 33333332


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                      .  .+.+|++|+|+|.
T Consensus       228 ~--~~g~D~vid~~g~  241 (362)
T 2c0c_A          228 Y--PEGVDVVYESVGG  241 (362)
T ss_dssp             C--TTCEEEEEECSCT
T ss_pred             c--CCCCCEEEECCCH
Confidence            1  1369999999984

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.61  E-value=0.00048  Score=51.82  Aligned_cols=35  Identities=23%  Similarity=0.335  Sum_probs=32.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .|++++|+||++++|...++.+...|++|++++++
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~  184 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASR  184 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence            57899999999999999999999999999999885

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.61  E-value=0.00049  Score=52.33  Aligned_cols=35  Identities=17%  Similarity=0.264  Sum_probs=32.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      +.+++++|+|+ |++|+.+++.+...|++|++++|+
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~  199 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDIN  199 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCC
Confidence            55689999999 999999999999999999999987

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.60  E-value=0.00042  Score=52.13  Aligned_cols=77  Identities=21%  Similarity=0.312  Sum_probs=49.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .|++++|+||++++|...++.+...|++|+++ ++   .+.+ +..+++       +.  ..  +| .+ +++...+.+.
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~---~~~~-~~~~~l-------Ga--~~--i~-~~-~~~~~~~~~~  211 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-AR---GSDL-EYVRDL-------GA--TP--ID-AS-REPEDYAAEH  211 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-EC---HHHH-HHHHHH-------TS--EE--EE-TT-SCHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eC---HHHH-HHHHHc-------CC--CE--ec-cC-CCHHHHHHHH
Confidence            57899999999999999999999999998888 54   2222 222222       22  22  45 33 2333333333


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                      ... ..+|++|.|+|.
T Consensus       212 ~~~-~g~D~vid~~g~  226 (343)
T 3gaz_A          212 TAG-QGFDLVYDTLGG  226 (343)
T ss_dssp             HTT-SCEEEEEESSCT
T ss_pred             hcC-CCceEEEECCCc
Confidence            221 369999999984

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.58  E-value=0.00033  Score=53.61  Aligned_cols=36  Identities=19%  Similarity=0.193  Sum_probs=33.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+++++|+|+ |+||..+++.+...|++|++++++
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~  200 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDIN  200 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCC
Confidence            467899999998 999999999999999999999986

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.50  E-value=0.00044  Score=51.25  Aligned_cols=36  Identities=22%  Similarity=0.337  Sum_probs=32.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      .+.+++++|+|+ |++|++++..|.+.|+ +|+++.|+
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~  174 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRT  174 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCC
Confidence            357889999998 7899999999999998 79999986

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.49  E-value=0.00022  Score=52.61  Aligned_cols=37  Identities=22%  Similarity=0.302  Sum_probs=33.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      .|++++|+|+++++|...++.+...|++|++++++..
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~  161 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPE  161 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            5789999999999999999999999999999998643

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.45  E-value=0.00062  Score=51.69  Aligned_cols=72  Identities=15%  Similarity=0.264  Sum_probs=52.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      ..++|.|+ |.+|..+++.|.+ ...|.+.+++   .+.+..    +.       .....+.+|+.|.+++.+++.    
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~---~~~~~~----~~-------~~~~~~~~d~~d~~~l~~~~~----   76 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVN---NENLEK----VK-------EFATPLKVDASNFDKLVEVMK----   76 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESC---HHHHHH----HT-------TTSEEEECCTTCHHHHHHHHT----
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcC---HHHHHH----Hh-------ccCCcEEEecCCHHHHHHHHh----
Confidence            35999998 9999999998865 5689898886   222221    11       234567899999887766654    


Q ss_pred             hcCCccEEEeCCcCC
Q 044851          121 AYDRIDILVNNAAEQ  135 (149)
Q Consensus       121 ~~g~id~li~~ag~~  135 (149)
                         +.|+||++++..
T Consensus        77 ---~~DvVi~~~p~~   88 (365)
T 3abi_A           77 ---EFELVIGALPGF   88 (365)
T ss_dssp             ---TCSEEEECCCGG
T ss_pred             ---CCCEEEEecCCc
Confidence               469999998753

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.44  E-value=0.0013  Score=48.36  Aligned_cols=48  Identities=21%  Similarity=0.324  Sum_probs=37.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCCChHHHHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLR   88 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~   88 (149)
                      .+.+++++|+|+ ||.|++++..|.+.|+ +|+++.|+   .+.+++..+++.
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~---~~~a~~la~~~~  171 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRT---FAKAEQLAELVA  171 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESS---HHHHHHHHHHHG
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECC---HHHHHHHHHHhh
Confidence            467899999998 6999999999999996 79999997   344444444443

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.43  E-value=0.00068  Score=49.69  Aligned_cols=36  Identities=25%  Similarity=0.317  Sum_probs=32.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      .+++|+++|+|+ +|.|++++..|.+.|+ +|+++.|+
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~  153 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRD  153 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            468899999998 6999999999999996 79999987

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.38  E-value=0.00077  Score=48.69  Aligned_cols=36  Identities=22%  Similarity=0.400  Sum_probs=31.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKP   74 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~   74 (149)
                      +++++++|.|+ ||+|..+++.|+..|. ++.+++++.
T Consensus        29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDT   65 (249)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence            56778999986 6999999999999997 688999875

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.37  E-value=0.0023  Score=48.32  Aligned_cols=83  Identities=13%  Similarity=0.113  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .|.+++|+|+ +++|...++.....|++ |+++++++   +.+ +..+++ .      ..+.....|-.+.+++.+.+.+
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~---~~~-~~a~~l-~------~~~~~~~~~~~~~~~~~~~v~~  246 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDE---GRL-KFAKEI-C------PEVVTHKVERLSAEESAKKIVE  246 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCH---HHH-HHHHHH-C------TTCEEEECCSCCHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH---HHH-HHHHHh-c------hhcccccccccchHHHHHHHHH
Confidence            4778999998 99999999888888998 88888752   222 233333 2      1233344444444444433333


Q ss_pred             HHHhcCCccEEEeCCcC
Q 044851          118 VVNAYDRIDILVNNAAE  134 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~  134 (149)
                      +.. ...+|++|.++|.
T Consensus       247 ~t~-g~g~Dvvid~~g~  262 (363)
T 3m6i_A          247 SFG-GIEPAVALECTGV  262 (363)
T ss_dssp             HTS-SCCCSEEEECSCC
T ss_pred             HhC-CCCCCEEEECCCC
Confidence            221 1269999999885

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.36  E-value=0.00061  Score=51.80  Aligned_cols=77  Identities=16%  Similarity=0.225  Sum_probs=50.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .|++++|+|+++++|...++.+...|++|+++++. .   .. +.+++       .+.. .+  +|..+.+..    +.+
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~-~---~~-~~~~~-------lGa~-~v--~~~~~~~~~----~~~  243 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQ-D---AS-ELVRK-------LGAD-DV--IDYKSGSVE----EQL  243 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECG-G---GH-HHHHH-------TTCS-EE--EETTSSCHH----HHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCh-H---HH-HHHHH-------cCCC-EE--EECCchHHH----HHH
Confidence            57899999999999999999888899998887732 2   11 12221       2322 12  355543322    223


Q ss_pred             HHhcCCccEEEeCCcCC
Q 044851          119 VNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~  135 (149)
                      .+ .+.+|++|.++|..
T Consensus       244 ~~-~~g~D~vid~~g~~  259 (375)
T 2vn8_A          244 KS-LKPFDFILDNVGGS  259 (375)
T ss_dssp             HT-SCCBSEEEESSCTT
T ss_pred             hh-cCCCCEEEECCCCh
Confidence            22 35799999999864

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.32  E-value=0.00028  Score=55.70  Aligned_cols=36  Identities=31%  Similarity=0.489  Sum_probs=33.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.||+++|||++ +||+.+|+.|...|++|++++++
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~  297 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEID  297 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSC
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCC
Confidence            4789999999987 99999999999999999999886

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.29  E-value=0.0014  Score=49.77  Aligned_cols=76  Identities=17%  Similarity=0.197  Sum_probs=50.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .|.+++|+|+ +++|...++.+...|++|++++++..+.   ....+   .    .+.. .  .+|..+.+.+.      
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~---~~~~~---~----lGa~-~--v~~~~~~~~~~------  246 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKK---EEALK---N----FGAD-S--FLVSRDQEQMQ------  246 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGH---HHHHH---T----SCCS-E--EEETTCHHHHH------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHH---h----cCCc-e--EEeccCHHHHH------
Confidence            6789999996 9999999999989999999998863322   11111   1    2322 1  24665543222      


Q ss_pred             HHhcCCccEEEeCCcCC
Q 044851          119 VNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~  135 (149)
                       +..+.+|++|.++|..
T Consensus       247 -~~~~~~D~vid~~g~~  262 (366)
T 1yqd_A          247 -AAAGTLDGIIDTVSAV  262 (366)
T ss_dssp             -HTTTCEEEEEECCSSC
T ss_pred             -HhhCCCCEEEECCCcH
Confidence             2234799999999863

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.29  E-value=0.001  Score=45.33  Aligned_cols=35  Identities=14%  Similarity=0.114  Sum_probs=30.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc-CCcEEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQE-GATVAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~-g~~Vi~~~~~   73 (149)
                      +.++.++|.|+ |.+|..+++.|.+. |+.|++++++
T Consensus        37 ~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~   72 (183)
T 3c85_A           37 PGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIR   72 (183)
T ss_dssp             CTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESC
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECC
Confidence            44556888884 89999999999999 9999999986

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.26  E-value=0.0019  Score=45.25  Aligned_cols=73  Identities=12%  Similarity=0.110  Sum_probs=47.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      .++|+|+ |.+|..+++.|.+.|+.|+++++++   +.+....    .     .....++..|.++.+.+..+      .
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~---~~~~~l~----~-----~~~~~~i~gd~~~~~~l~~a------~   62 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDR---ELCEEFA----K-----KLKATIIHGDGSHKEILRDA------E   62 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCH---HHHHHHH----H-----HSSSEEEESCTTSHHHHHHH------T
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH---HHHHHHH----H-----HcCCeEEEcCCCCHHHHHhc------C
Confidence            3889996 8899999999999999999999862   2222211    1     01245677787776543321      2


Q ss_pred             cCCccEEEeCCc
Q 044851          122 YDRIDILVNNAA  133 (149)
Q Consensus       122 ~g~id~li~~ag  133 (149)
                      ....|.+|.+.+
T Consensus        63 i~~ad~vi~~~~   74 (218)
T 3l4b_C           63 VSKNDVVVILTP   74 (218)
T ss_dssp             CCTTCEEEECCS
T ss_pred             cccCCEEEEecC
Confidence            235677776654

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.24  E-value=0.0017  Score=49.19  Aligned_cols=79  Identities=18%  Similarity=0.176  Sum_probs=50.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .|.+++|+| ++++|...++.+...|++|++++++.   +.+ +..+++       +.. .+  +| .+.+++.+.+.++
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~---~~~-~~~~~l-------Ga~-~v--i~-~~~~~~~~~v~~~  252 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSR---EKL-DRAFAL-------GAD-HG--IN-RLEEDWVERVYAL  252 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCH---HHH-HHHHHH-------TCS-EE--EE-TTTSCHHHHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCc---hhH-HHHHHc-------CCC-EE--Ec-CCcccHHHHHHHH
Confidence            578999999 88999999998888999999998762   222 222222       222 12  34 3333343434433


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                      ... ..+|++|.++|.
T Consensus       253 ~~g-~g~D~vid~~g~  267 (363)
T 3uog_A          253 TGD-RGADHILEIAGG  267 (363)
T ss_dssp             HTT-CCEEEEEEETTS
T ss_pred             hCC-CCceEEEECCCh
Confidence            222 259999999983

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.19  E-value=0.00068  Score=50.50  Aligned_cols=35  Identities=34%  Similarity=0.450  Sum_probs=31.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQE   76 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~   76 (149)
                      +++|+|+++++|...++.+...|++|++++++..+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~  186 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAE  186 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTC
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            69999999999999999888899999999987443

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.16  E-value=0.0022  Score=48.38  Aligned_cols=37  Identities=14%  Similarity=0.063  Sum_probs=31.5

Q ss_pred             CC-CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           39 RG-MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        39 ~~-~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      .| .+++|+|+++++|...++.....|++|+++.++..
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~  203 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRP  203 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCT
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCcc
Confidence            46 89999999999999998888888999888876543

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.15  E-value=0.005  Score=46.27  Aligned_cols=34  Identities=29%  Similarity=0.247  Sum_probs=29.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .|.+++|+|+ +++|...++.+...|++|++++++
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~  201 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARS  201 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCC
Confidence            5788999997 899999999888889998888875

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.11  E-value=0.0041  Score=46.00  Aligned_cols=37  Identities=16%  Similarity=0.320  Sum_probs=30.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKP   74 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~   74 (149)
                      ++++.+++|.|+ +|+|..+++.|+..|.. +.+++.+.
T Consensus        33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            467788999976 78999999999999964 88888764

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.11  E-value=0.002  Score=48.36  Aligned_cols=34  Identities=24%  Similarity=0.262  Sum_probs=31.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      .|++++|+|+ +++|...++.+...|+ +|++++++
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~  201 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPS  201 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            6788999999 9999999999888999 89999886

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.11  E-value=0.0012  Score=49.93  Aligned_cols=75  Identities=19%  Similarity=0.143  Sum_probs=49.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .|.+++|+|+ +++|...++.+...|++|++++++..+.+.+    +++       +.. .+  .|..+..+   +.+.+
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~----~~l-------Ga~-~v--~~~~~~~~---~~~~~  240 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA----MKM-------GAD-HY--IATLEEGD---WGEKY  240 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH----HHH-------TCS-EE--EEGGGTSC---HHHHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH----HHc-------CCC-EE--EcCcCchH---HHHHh
Confidence            5789999999 9999999998888899999999875443322    222       211 12  24433201   12222


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                      .   +.+|++|.++|.
T Consensus       241 ~---~~~D~vid~~g~  253 (360)
T 1piw_A          241 F---DTFDLIVVCASS  253 (360)
T ss_dssp             C---SCEEEEEECCSC
T ss_pred             h---cCCCEEEECCCC
Confidence            1   479999999986

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.04  E-value=0.0022  Score=48.63  Aligned_cols=79  Identities=15%  Similarity=0.172  Sum_probs=50.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCC-hHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGF-DENCKRVVD  116 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~  116 (149)
                      .|.+++|+|+ +++|...++.....|+ +|+++++++.+.+    ..++       .+.. .+  +|..+ .+++.+.+.
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~----~~~~-------lGa~-~v--i~~~~~~~~~~~~~~  256 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFE----KAKV-------FGAT-DF--VNPNDHSEPISQVLS  256 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH----HHHH-------TTCC-EE--ECGGGCSSCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHH----HHHH-------hCCc-eE--EeccccchhHHHHHH
Confidence            5788999995 8999999998888899 6888887633222    1221       2222 12  34443 123444444


Q ss_pred             HHHHhcCCccEEEeCCcC
Q 044851          117 EVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~  134 (149)
                      ++..  +.+|++|.++|.
T Consensus       257 ~~~~--~g~D~vid~~g~  272 (374)
T 1cdo_A          257 KMTN--GGVDFSLECVGN  272 (374)
T ss_dssp             HHHT--SCBSEEEECSCC
T ss_pred             HHhC--CCCCEEEECCCC
Confidence            4433  369999999985

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.03  E-value=0.0017  Score=48.65  Aligned_cols=77  Identities=18%  Similarity=0.192  Sum_probs=49.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .|.+++|+|+ +++|...++.+...|+ +|++++++.   +.+ +..   ..    .   .. ...|..+. ++.+.+.+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~---~~~-~~~---~~----l---a~-~v~~~~~~-~~~~~~~~  226 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNP---YRL-AFA---RP----Y---AD-RLVNPLEE-DLLEVVRR  226 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCH---HHH-GGG---TT----T---CS-EEECTTTS-CHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH---HHH-HHH---HH----h---HH-hccCcCcc-CHHHHHHH
Confidence            6788999999 9999999998888999 899998862   211 111   10    1   11 12355443 33333333


Q ss_pred             HHHhcCCccEEEeCCcC
Q 044851          118 VVNAYDRIDILVNNAAE  134 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~  134 (149)
                      +.  ...+|++|.++|.
T Consensus       227 ~~--~~g~D~vid~~g~  241 (343)
T 2dq4_A          227 VT--GSGVEVLLEFSGN  241 (343)
T ss_dssp             HH--SSCEEEEEECSCC
T ss_pred             hc--CCCCCEEEECCCC
Confidence            32  3369999999885

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.97  E-value=0.0047  Score=46.85  Aligned_cols=34  Identities=18%  Similarity=0.207  Sum_probs=30.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEe
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTY   71 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~   71 (149)
                      -.|.+++|+|+++++|...++.....|++|+.+.
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~  196 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC  196 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence            3678999999999999999998888999988775

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=96.96  E-value=0.00037  Score=45.84  Aligned_cols=33  Identities=15%  Similarity=0.194  Sum_probs=30.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      +++++|.|+ |++|..+++.|...|+.|++++|+
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~   53 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRN   53 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCC
Confidence            778999996 999999999999999998888886

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.95  E-value=0.007  Score=45.67  Aligned_cols=79  Identities=20%  Similarity=0.194  Sum_probs=50.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQE-GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .|.+++|+|+ +++|...++..... |++|++++++   .+.+ +..++       .+.. .+  +|..+.  +.+.+.+
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~---~~~~-~~~~~-------lGa~-~v--i~~~~~--~~~~v~~  248 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVK---EEKL-KLAER-------LGAD-HV--VDARRD--PVKQVME  248 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESS---HHHH-HHHHH-------TTCS-EE--EETTSC--HHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC---HHHH-HHHHH-------hCCC-EE--Eeccch--HHHHHHH
Confidence            5789999999 89999999888888 9999999875   2222 22221       2322 12  355543  3333333


Q ss_pred             HHHhcCCccEEEeCCcCC
Q 044851          118 VVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~  135 (149)
                      +.. ...+|++|.++|..
T Consensus       249 ~~~-g~g~Dvvid~~G~~  265 (359)
T 1h2b_A          249 LTR-GRGVNVAMDFVGSQ  265 (359)
T ss_dssp             HTT-TCCEEEEEESSCCH
T ss_pred             HhC-CCCCcEEEECCCCc
Confidence            321 12699999999863

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.93  E-value=0.0046  Score=47.63  Aligned_cols=35  Identities=23%  Similarity=0.428  Sum_probs=32.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      +.|++++|.|+ |++|..+++.|...|+ +|++++|+
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~  200 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRT  200 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSS
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCC
Confidence            57889999998 9999999999999998 79999886

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.92  E-value=0.017  Score=43.50  Aligned_cols=34  Identities=29%  Similarity=0.288  Sum_probs=29.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      .|.+++|+|+ +++|...++.....|+ +|++++++
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~  205 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLS  205 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4788999996 8999999988888899 78888875

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.92  E-value=0.0021  Score=47.21  Aligned_cols=37  Identities=11%  Similarity=0.170  Sum_probs=32.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKP   74 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~   74 (149)
                      .+++|+++|+|+ ||.|++++..|.+.|+ +|+++.|+.
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~  151 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTM  151 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence            357889999997 7999999999999999 799999874

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.91  E-value=0.0031  Score=47.87  Aligned_cols=75  Identities=17%  Similarity=0.179  Sum_probs=48.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .|.+++|+|+ +++|...++.....|++|+++++++.+.+    .++++       +.. .+  +|..+.+.+    +++
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~----~a~~l-------Ga~-~v--i~~~~~~~~----~~~  254 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE----AAKAL-------GAD-EV--VNSRNADEM----AAH  254 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH----HHHHH-------TCS-EE--EETTCHHHH----HTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHHc-------CCc-EE--eccccHHHH----HHh
Confidence            4788999997 88999999888888999999888643322    22222       211 12  355554322    222


Q ss_pred             HHhcCCccEEEeCCcCC
Q 044851          119 VNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~  135 (149)
                      .   +.+|++|.++|..
T Consensus       255 ~---~g~Dvvid~~g~~  268 (369)
T 1uuf_A          255 L---KSFDFILNTVAAP  268 (369)
T ss_dssp             T---TCEEEEEECCSSC
T ss_pred             h---cCCCEEEECCCCH
Confidence            1   4699999998853

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.91  E-value=0.0025  Score=48.30  Aligned_cols=79  Identities=15%  Similarity=0.146  Sum_probs=49.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCC-hHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGF-DENCKRVVD  116 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~  116 (149)
                      .|.+++|+|+ +++|...++.....|+ +|+++++++.+.+    ..++       .+.. .+  +|..+ .+++.+.+.
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~----~~~~-------lGa~-~v--i~~~~~~~~~~~~~~  255 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFA----KAKE-------VGAT-EC--VNPQDYKKPIQEVLT  255 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH----HHHH-------TTCS-EE--ECGGGCSSCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH----HHHH-------hCCc-eE--ecccccchhHHHHHH
Confidence            5788999995 8999999998888899 6888887643222    1121       2222 12  34433 123333343


Q ss_pred             HHHHhcCCccEEEeCCcC
Q 044851          117 EVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~  134 (149)
                      ++..  +.+|++|.++|.
T Consensus       256 ~~~~--~g~D~vid~~g~  271 (374)
T 2jhf_A          256 EMSN--GGVDFSFEVIGR  271 (374)
T ss_dssp             HHTT--SCBSEEEECSCC
T ss_pred             HHhC--CCCcEEEECCCC
Confidence            3322  368999999875

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.91  E-value=0.0096  Score=45.27  Aligned_cols=34  Identities=15%  Similarity=0.115  Sum_probs=30.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-CcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEG-ATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g-~~Vi~~~~~   73 (149)
                      .|.+++|+| ++++|...++.+...| ++|++++++
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~  229 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGS  229 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESC
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCC
Confidence            478999999 8999999999888889 589999986

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.90  E-value=0.0049  Score=46.03  Aligned_cols=77  Identities=12%  Similarity=0.114  Sum_probs=49.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .|.+++|+|+ +++|...++.+...|++|+++++++   +.+ +..++       .+.. .+  .|..+.+..+.+.+  
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~---~~~-~~~~~-------lGa~-~~--i~~~~~~~~~~~~~--  228 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDD---AKL-NLARR-------LGAE-VA--VNARDTDPAAWLQK--  228 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCH---HHH-HHHHH-------TTCS-EE--EETTTSCHHHHHHH--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCH---HHH-HHHHH-------cCCC-EE--EeCCCcCHHHHHHH--
Confidence            5788999997 8899999988888999999998862   222 22222       2322 12  35555433333222  


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                        ..+.+|++|.++|.
T Consensus       229 --~~g~~d~vid~~g~  242 (340)
T 3s2e_A          229 --EIGGAHGVLVTAVS  242 (340)
T ss_dssp             --HHSSEEEEEESSCC
T ss_pred             --hCCCCCEEEEeCCC
Confidence              23578999998863

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.90  E-value=0.0029  Score=47.90  Aligned_cols=79  Identities=16%  Similarity=0.143  Sum_probs=49.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCC-hHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGF-DENCKRVVD  116 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~  116 (149)
                      .|.+++|+|+ +++|...++.....|+ +|+++++++.+.+    ..+++       +.. .+  .|..+ .+++...+.
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~----~~~~l-------Ga~-~v--i~~~~~~~~~~~~v~  254 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA----RAKEF-------GAT-EC--INPQDFSKPIQEVLI  254 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH----HHHHH-------TCS-EE--ECGGGCSSCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH----HHHHc-------CCc-eE--eccccccccHHHHHH
Confidence            5788999996 8999999988888899 6888887643322    22222       221 12  34433 123333333


Q ss_pred             HHHHhcCCccEEEeCCcC
Q 044851          117 EVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~  134 (149)
                      ++..  +.+|++|.++|.
T Consensus       255 ~~~~--~g~D~vid~~g~  270 (373)
T 2fzw_A          255 EMTD--GGVDYSFECIGN  270 (373)
T ss_dssp             HHTT--SCBSEEEECSCC
T ss_pred             HHhC--CCCCEEEECCCc
Confidence            3322  369999999875

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.88  E-value=0.002  Score=48.40  Aligned_cols=38  Identities=21%  Similarity=0.262  Sum_probs=32.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCCh
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQED   77 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~   77 (149)
                      .|.+++|+|+ +++|...++.....|++|+++++++.+.
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~  213 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKK  213 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence            5789999997 8999999988888899999998875443

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.84  E-value=0.0035  Score=47.47  Aligned_cols=35  Identities=26%  Similarity=0.345  Sum_probs=29.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHH-cCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQ-EGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~-~g~~Vi~~~~~   73 (149)
                      .|.+++|+||++++|...++.... .|++|++++++
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~  206 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASR  206 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence            578899999999999988776665 58899999885

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.82  E-value=0.0021  Score=48.90  Aligned_cols=79  Identities=14%  Similarity=0.132  Sum_probs=49.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCC-hHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGF-DENCKRVVD  116 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~  116 (149)
                      .|.+++|+|+ +++|...++.....|+ +|+++++++.+.+    ..+   +    .+.. .+  +|..+ .+++.+.+.
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~----~a~---~----lGa~-~v--i~~~~~~~~~~~~i~  257 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYE----TAK---K----FGVN-EF--VNPKDHDKPIQEVIV  257 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHH----HHH---T----TTCC-EE--ECGGGCSSCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH----HHH---H----cCCc-EE--EccccCchhHHHHHH
Confidence            4778999998 8999999988888899 6999987643222    221   1    2222 11  34432 233444444


Q ss_pred             HHHHhcCCccEEEeCCcC
Q 044851          117 EVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~  134 (149)
                      ++..  +.+|++|.++|.
T Consensus       258 ~~~~--gg~D~vid~~g~  273 (378)
T 3uko_A          258 DLTD--GGVDYSFECIGN  273 (378)
T ss_dssp             HHTT--SCBSEEEECSCC
T ss_pred             HhcC--CCCCEEEECCCC
Confidence            4322  369999999885

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.82  E-value=0.0037  Score=47.39  Aligned_cols=79  Identities=14%  Similarity=0.107  Sum_probs=49.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCC-hHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGF-DENCKRVVD  116 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~  116 (149)
                      .|.+++|+|+ +++|...++.....|+ +|+++++++.+.+    ..++       .+.. .+  +|..+ .+++.+.+.
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~----~a~~-------lGa~-~v--i~~~~~~~~~~~~v~  259 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFP----KAKA-------LGAT-DC--LNPRELDKPVQDVIT  259 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH----HHHH-------TTCS-EE--ECGGGCSSCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH----HHHH-------hCCc-EE--EccccccchHHHHHH
Confidence            4788999995 8999999988888899 6888887633222    2221       2222 12  34443 123333344


Q ss_pred             HHHHhcCCccEEEeCCcC
Q 044851          117 EVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~  134 (149)
                      ++..  +.+|++|.++|.
T Consensus       260 ~~~~--~g~Dvvid~~G~  275 (376)
T 1e3i_A          260 ELTA--GGVDYSLDCAGT  275 (376)
T ss_dssp             HHHT--SCBSEEEESSCC
T ss_pred             HHhC--CCccEEEECCCC
Confidence            4322  369999999985

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.80  E-value=0.0038  Score=47.07  Aligned_cols=76  Identities=16%  Similarity=0.205  Sum_probs=46.7

Q ss_pred             CEEEEecCCChHHHHH-HHHH-HHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAV-CHCF-AQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        41 ~~~litG~s~gig~~~-a~~L-~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .+++|+|+ +++|... ++.. ...|++ |++++++......+ +.+++       .+.  ..+  |..+.+ +.+ +.+
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~-~~~~~-------lGa--~~v--~~~~~~-~~~-i~~  238 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTI-DIIEE-------LDA--TYV--DSRQTP-VED-VPD  238 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHH-HHHHH-------TTC--EEE--ETTTSC-GGG-HHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHH-HHHHH-------cCC--ccc--CCCccC-HHH-HHH
Confidence            89999999 9999998 7766 567998 99999874310011 12221       222  223  554432 223 333


Q ss_pred             HHHhcCCccEEEeCCcC
Q 044851          118 VVNAYDRIDILVNNAAE  134 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~  134 (149)
                      +   .+.+|++|.++|.
T Consensus       239 ~---~gg~Dvvid~~g~  252 (357)
T 2b5w_A          239 V---YEQMDFIYEATGF  252 (357)
T ss_dssp             H---SCCEEEEEECSCC
T ss_pred             h---CCCCCEEEECCCC
Confidence            3   2368999998875

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.80  E-value=0.0085  Score=45.58  Aligned_cols=80  Identities=15%  Similarity=0.191  Sum_probs=49.8

Q ss_pred             CCCEEEEec-CCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTG-GDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG-~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .+.+++|.| |++++|...++.....|++|++++++   .+++ +.+++       .+... +  +|..+.+ +.+.+.+
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~---~~~~-~~~~~-------lGa~~-~--~~~~~~~-~~~~v~~  234 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRK---QEQA-DLLKA-------QGAVH-V--CNAASPT-FMQDLTE  234 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESS---HHHH-HHHHH-------TTCSC-E--EETTSTT-HHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHH-HHHHh-------CCCcE-E--EeCCChH-HHHHHHH
Confidence            466789987 89999999998888889999999875   2222 22222       23222 2  3544433 2222333


Q ss_pred             HHHhcCCccEEEeCCcC
Q 044851          118 VVNAYDRIDILVNNAAE  134 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~  134 (149)
                      +... ..+|++|.++|.
T Consensus       235 ~t~~-~g~d~v~d~~g~  250 (379)
T 3iup_A          235 ALVS-TGATIAFDATGG  250 (379)
T ss_dssp             HHHH-HCCCEEEESCEE
T ss_pred             HhcC-CCceEEEECCCc
Confidence            3222 159999999885

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=96.79  E-value=0.008  Score=45.01  Aligned_cols=34  Identities=15%  Similarity=0.257  Sum_probs=29.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC--CcEEEEecCC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEG--ATVAFTYVKP   74 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g--~~Vi~~~~~~   74 (149)
                      ..++|+||+|.+|..++..|+..|  ..|++++++.
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~   44 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVN   44 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence            369999999999999999999988  6788888763

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.77  E-value=0.0046  Score=45.85  Aligned_cols=34  Identities=32%  Similarity=0.468  Sum_probs=30.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEec
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYV   72 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~   72 (149)
                      .|.+++|+||++++|...++.+...|++|+++.+
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~  185 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTAS  185 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEec
Confidence            5789999999999999999999899999888764

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.70  E-value=0.0046  Score=46.90  Aligned_cols=34  Identities=26%  Similarity=0.327  Sum_probs=29.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      .|.+++|+|+ +++|...++.....|+ .|++++++
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~  216 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQ  216 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4788999998 8999999988888899 68888775

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.68  E-value=0.0093  Score=45.72  Aligned_cols=34  Identities=26%  Similarity=0.382  Sum_probs=29.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      .|.+++|+|+ +++|...++.....|+ +|++++++
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~  247 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPS  247 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            5788999998 8999999888888899 68888775

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.68  E-value=0.0046  Score=46.64  Aligned_cols=75  Identities=15%  Similarity=0.164  Sum_probs=48.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .|.+++|+|+ +++|...++.+...|++|++++++..+.+   ...+   .    .+... +  .|..+.+.+       
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~---~~~~---~----lGa~~-v--i~~~~~~~~-------  238 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKRE---EALQ---D----LGADD-Y--VIGSDQAKM-------  238 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHH---HHHT---T----SCCSC-E--EETTCHHHH-------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHH---HHHH---H----cCCce-e--eccccHHHH-------
Confidence            6789999995 89999999888888999999988633211   1110   1    23221 2  344443222       


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                      .+..+.+|++|.++|.
T Consensus       239 ~~~~~g~D~vid~~g~  254 (357)
T 2cf5_A          239 SELADSLDYVIDTVPV  254 (357)
T ss_dssp             HHSTTTEEEEEECCCS
T ss_pred             HHhcCCCCEEEECCCC
Confidence            2222469999999985

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.66  E-value=0.0046  Score=46.82  Aligned_cols=79  Identities=18%  Similarity=0.078  Sum_probs=48.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCC-hHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGF-DENCKRVVD  116 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~  116 (149)
                      .|.+++|+|+ +++|...++.....|+ +|++++++..+.+    ..++       .+.. .+  +|..+ .+++.+.+.
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~----~a~~-------lGa~-~v--i~~~~~~~~~~~~i~  255 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFP----KAIE-------LGAT-EC--LNPKDYDKPIYEVIC  255 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH----HHHH-------TTCS-EE--ECGGGCSSCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHH----HHHH-------cCCc-EE--EecccccchHHHHHH
Confidence            4788999995 8999999888888899 6888887633222    2221       2222 12  34432 122333333


Q ss_pred             HHHHhcCCccEEEeCCcC
Q 044851          117 EVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~  134 (149)
                      ++..  +.+|++|.++|.
T Consensus       256 ~~t~--gg~Dvvid~~g~  271 (373)
T 1p0f_A          256 EKTN--GGVDYAVECAGR  271 (373)
T ss_dssp             HHTT--SCBSEEEECSCC
T ss_pred             HHhC--CCCCEEEECCCC
Confidence            3322  369999999875

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.61  E-value=0.0077  Score=43.44  Aligned_cols=35  Identities=20%  Similarity=0.295  Sum_probs=29.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~   73 (149)
                      +++++++|.|+ ||+|..+++.|+..|.. +.+++.+
T Consensus        26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            56778999997 67999999999999975 7787654

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.60  E-value=0.0013  Score=46.63  Aligned_cols=31  Identities=6%  Similarity=-0.061  Sum_probs=27.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      +.++|.|+ +.+|..+++.|.+.|+ |++++++
T Consensus        10 ~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~   40 (234)
T 2aef_A           10 RHVVICGW-SESTLECLRELRGSEV-FVLAEDE   40 (234)
T ss_dssp             CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCG
T ss_pred             CEEEEECC-ChHHHHHHHHHHhCCe-EEEEECC
Confidence            46889997 7899999999999999 9999876

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=96.58  E-value=0.0043  Score=46.50  Aligned_cols=82  Identities=15%  Similarity=0.136  Sum_probs=48.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-------cEEEEecCCCC-hHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGA-------TVAFTYVKPQE-DKDAKETLEMLREAKTPDAKDPMAISADLGFDENCK  112 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~-------~Vi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  112 (149)
                      ..++||||+|.+|..++..|+..|.       .|++++++... .+.+......+..    ....+.   .|+....+..
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~----~~~~~~---~~i~~~~~~~   78 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDD----CAFPLL---AGMTAHADPM   78 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHT----TTCTTE---EEEEEESSHH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhh----hccccc---CcEEEecCcH
Confidence            4699999999999999999999885       58887764100 1112222333332    111121   2443333322


Q ss_pred             HHHHHHHHhcCCccEEEeCCcCCC
Q 044851          113 RVVDEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       113 ~~~~~~~~~~g~id~li~~ag~~~  136 (149)
                      .       .+...|++|++||...
T Consensus        79 ~-------al~~aD~Vi~~ag~~~   95 (329)
T 1b8p_A           79 T-------AFKDADVALLVGARPR   95 (329)
T ss_dssp             H-------HTTTCSEEEECCCCCC
T ss_pred             H-------HhCCCCEEEEeCCCCC
Confidence            2       2335799999999754

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.52  E-value=0.017  Score=43.24  Aligned_cols=34  Identities=15%  Similarity=0.080  Sum_probs=30.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc--CCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQE--GATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~--g~~Vi~~~~~   73 (149)
                      .|.+++|+|+ +++|...++.....  |++|++++++
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~  205 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRS  205 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCC
Confidence            5789999999 89999999988888  9999999875

>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}

Probab=96.51  E-value=0.068  Score=33.61  Aligned_cols=80  Identities=20%  Similarity=0.343  Sum_probs=56.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHhc
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAY  122 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  122 (149)
                      .++....--|=+.+++.+.++|.+|++++.+.. ...-.+.+++..+    .+..+.    -+.|.++...-+.++++++
T Consensus         5 fvvfssdpeilkeivreikrqgvrvvllysdqd-ekrrrerleefek----qgvdvr----tvedkedfrenireiwery   75 (162)
T 2l82_A            5 FVVFSSDPEILKEIVREIKRQGVRVVLLYSDQD-EKRRRERLEEFEK----QGVDVR----TVEDKEDFRENIREIWERY   75 (162)
T ss_dssp             EEEEESCHHHHHHHHHHHHHTTCEEEEEECCSC-HHHHHHHHHHHHT----TTCEEE----ECCSHHHHHHHHHHHHHHC
T ss_pred             EEEecCCHHHHHHHHHHHHhCCeEEEEEecCch-HHHHHHHHHHHHH----cCCcee----eeccHHHHHHHHHHHHHhC
Confidence            445555556889999999999999999987632 3333445555554    333222    3567888999999999999


Q ss_pred             CCccEEEeC
Q 044851          123 DRIDILVNN  131 (149)
Q Consensus       123 g~id~li~~  131 (149)
                      +++|+++..
T Consensus        76 pqldvvviv   84 (162)
T 2l82_A           76 PQLDVVVIV   84 (162)
T ss_dssp             TTCCEEEEE
T ss_pred             CCCcEEEEE
Confidence            999987653

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.50  E-value=0.0091  Score=46.02  Aligned_cols=37  Identities=22%  Similarity=0.196  Sum_probs=32.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      +.+++++|+|+ |.+|...++.+...|++|+++++++.
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~  206 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPE  206 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            56889999996 88999999999999999999998743

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.44  E-value=0.026  Score=42.99  Aligned_cols=80  Identities=18%  Similarity=0.201  Sum_probs=48.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .|.+++|.|+ +++|...++.....|+ .|++++++   .+.+ +..+   .    .+.  .+  +|..+.+.+.+.+.+
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~---~~~~-~~a~---~----lGa--~~--i~~~~~~~~~~~v~~  248 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLN---PARL-AHAK---A----QGF--EI--ADLSLDTPLHEQIAA  248 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESC---HHHH-HHHH---H----TTC--EE--EETTSSSCHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCC---HHHH-HHHH---H----cCC--cE--EccCCcchHHHHHHH
Confidence            5788999995 9999998888878899 58888775   2222 2222   1    233  22  455543323332333


Q ss_pred             HHHhcCCccEEEeCCcCC
Q 044851          118 VVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~  135 (149)
                      +.. ...+|++|.++|..
T Consensus       249 ~t~-g~g~Dvvid~~G~~  265 (398)
T 1kol_A          249 LLG-EPEVDCAVDAVGFE  265 (398)
T ss_dssp             HHS-SSCEEEEEECCCTT
T ss_pred             HhC-CCCCCEEEECCCCc
Confidence            221 12599999999863

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.38  E-value=0.0056  Score=45.85  Aligned_cols=37  Identities=30%  Similarity=0.397  Sum_probs=34.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.++.++|.|++.-+|..+|+.|...|++|.++.|+
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~  210 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN  210 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence            5789999999999889999999999999999999876

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.31  E-value=0.017  Score=44.64  Aligned_cols=31  Identities=10%  Similarity=0.163  Sum_probs=28.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++|.|. |.+|..+++.|.+.|..|++++++
T Consensus         6 ~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d   36 (413)
T 3l9w_A            6 RVIIAGF-GRFGQITGRLLLSSGVKMVVLDHD   36 (413)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCEEEEECC
Confidence            4889987 779999999999999999999987

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.31  E-value=0.0093  Score=43.59  Aligned_cols=39  Identities=18%  Similarity=0.175  Sum_probs=33.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKD   79 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~   79 (149)
                      +++++|+|+ ||.|++++..|.+.|.+|.++.|+..+.++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~  156 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDF  156 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            788999997 899999999999999889999998655443

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.29  E-value=0.034  Score=40.89  Aligned_cols=34  Identities=12%  Similarity=0.239  Sum_probs=30.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      +++.|.||.|.+|.+++..|.+.|++|++++++.
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~   55 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED   55 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence            3588999999999999999999999999999874

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.28  E-value=0.0073  Score=44.87  Aligned_cols=36  Identities=22%  Similarity=0.342  Sum_probs=31.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCCh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQED   77 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~   77 (149)
                      +++|+|+++++|...++.+...|++|++++++..+.
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~  188 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA  188 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            799999999999999998888899999999875443

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.23  E-value=0.013  Score=43.88  Aligned_cols=34  Identities=18%  Similarity=0.076  Sum_probs=28.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      .|.+++|+|+ +++|...++.....|+ +|++++++
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~  200 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSR  200 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCC
Confidence            4778999985 8999998888888899 69988875

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=96.23  E-value=0.04  Score=40.73  Aligned_cols=31  Identities=23%  Similarity=0.256  Sum_probs=26.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--cEEEEec
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGA--TVAFTYV   72 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~   72 (149)
                      .++||||+|.+|..++..|+..|.  .++++++
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di   34 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDI   34 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECC
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcC
Confidence            589999999999999999998875  3777776

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.17  E-value=0.033  Score=42.51  Aligned_cols=80  Identities=16%  Similarity=0.194  Sum_probs=48.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .|.+++|+|+ +++|...++.....|+ +|++++++   .+.+ +..   ..    .+.  .+  +|..+.+.+.+.+.+
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~---~~~~-~~a---~~----lGa--~~--i~~~~~~~~~~~~~~  248 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQN---PERL-KLL---SD----AGF--ET--IDLRNSAPLRDQIDQ  248 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESC---HHHH-HHH---HT----TTC--EE--EETTSSSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC---HHHH-HHH---HH----cCC--cE--EcCCCcchHHHHHHH
Confidence            5788999996 9999998888777899 79999876   2222 121   21    232  22  455543321222222


Q ss_pred             HHHhcCCccEEEeCCcCC
Q 044851          118 VVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~  135 (149)
                      +.. ...+|++|.++|..
T Consensus       249 ~~~-g~g~Dvvid~~g~~  265 (398)
T 2dph_A          249 ILG-KPEVDCGVDAVGFE  265 (398)
T ss_dssp             HHS-SSCEEEEEECSCTT
T ss_pred             HhC-CCCCCEEEECCCCc
Confidence            221 12599999999853

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.14  E-value=0.019  Score=40.78  Aligned_cols=36  Identities=33%  Similarity=0.479  Sum_probs=32.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++++.+||.||+ .+|...++.|.+.|+.|+++..+
T Consensus        28 ~L~gk~VLVVGgG-~va~~ka~~Ll~~GA~VtVvap~   63 (223)
T 3dfz_A           28 DLKGRSVLVVGGG-TIATRRIKGFLQEGAAITVVAPT   63 (223)
T ss_dssp             CCTTCCEEEECCS-HHHHHHHHHHGGGCCCEEEECSS
T ss_pred             EcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEECCC
Confidence            5789999999974 79999999999999999999875

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.13  E-value=0.026  Score=42.61  Aligned_cols=34  Identities=12%  Similarity=0.069  Sum_probs=28.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      .|.+++|+|+ +++|...++.....|+ .|++++++
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~  224 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIV  224 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence            5788999995 8999999888888899 48888875

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.10  E-value=0.25  Score=35.88  Aligned_cols=34  Identities=18%  Similarity=0.155  Sum_probs=28.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      +++.|.|+ |.+|..+|..|++.|++|+++++++.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~   38 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTD   38 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence            45777765 77999999999999999999998743

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.10  E-value=0.0077  Score=41.76  Aligned_cols=33  Identities=15%  Similarity=0.305  Sum_probs=30.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      ++.|+|+.+.+|..+++.|.+.|++|++++|+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~   34 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE   34 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            478999999999999999999999999999863

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.09  E-value=0.01  Score=43.85  Aligned_cols=36  Identities=25%  Similarity=0.370  Sum_probs=31.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCC
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQE   76 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~   76 (149)
                      ++ ++|+|+++++|...++.....|++|++++++..+
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~  183 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGREST  183 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence            45 9999999999999999988999999999987443

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=96.03  E-value=0.036  Score=41.14  Aligned_cols=31  Identities=16%  Similarity=0.201  Sum_probs=26.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--cEEEEec
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGA--TVAFTYV   72 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~   72 (149)
                      .++||||+|++|..++..|+..|.  .++++++
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di   34 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGR   34 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEEC
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcC
Confidence            489999999999999999998874  3777776

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.01  E-value=0.0088  Score=44.02  Aligned_cols=36  Identities=19%  Similarity=0.319  Sum_probs=32.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      .+.++.++|+|+ ||.|++++..|.+.|+ +|+++.|+
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt  155 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRN  155 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESC
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            367899999997 6899999999999998 69999986

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=95.93  E-value=0.048  Score=41.80  Aligned_cols=37  Identities=24%  Similarity=0.200  Sum_probs=32.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      +.+++++|+|+ |.+|...++.+...|++|+++++++.
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~  218 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPE  218 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            46778999998 78999999999999999999999744

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=95.93  E-value=0.049  Score=40.63  Aligned_cols=34  Identities=24%  Similarity=0.288  Sum_probs=28.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQE-GATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~-g~~Vi~~~~~   73 (149)
                      .+.+++|+|+ +++|...++..... |++|++++++
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~  205 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLD  205 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4788999998 89999988777666 6789999876

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.81  E-value=0.023  Score=41.83  Aligned_cols=37  Identities=30%  Similarity=0.494  Sum_probs=34.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++||.++|.|+++-+|+.++..|...|++|.++.++
T Consensus       157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~  193 (285)
T 3p2o_A          157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK  193 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            4789999999999999999999999999999999875

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=95.76  E-value=0.11  Score=37.91  Aligned_cols=87  Identities=13%  Similarity=0.085  Sum_probs=52.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC---cEEEEecCCCChHHHHHHHHHHHhcc-CC-----CCCCceEEEecCCChHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGA---TVAFTYVKPQEDKDAKETLEMLREAK-TP-----DAKDPMAISADLGFDENC  111 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~---~Vi~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~Dv~~~~~v  111 (149)
                      +++.|.|+ |.+|.++++.|.+.|+   +|++++|++...+.+   .+.+.-.. ..     ....+.++.+   .++.+
T Consensus         4 ~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l---~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~   76 (280)
T 3tri_A            4 SNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFF---KEKCGVHTTQDNRQGALNADVVVLAV---KPHQI   76 (280)
T ss_dssp             SCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHH---HHTTCCEEESCHHHHHSSCSEEEECS---CGGGH
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHH---HHHcCCEEeCChHHHHhcCCeEEEEe---CHHHH
Confidence            45777777 8899999999999998   799999874332222   21100000 00     1233333333   35678


Q ss_pred             HHHHHHHHHh-cCCccEEEeCCcC
Q 044851          112 KRVVDEVVNA-YDRIDILVNNAAE  134 (149)
Q Consensus       112 ~~~~~~~~~~-~g~id~li~~ag~  134 (149)
                      ..++.++... ...=.++|.+++.
T Consensus        77 ~~vl~~l~~~~l~~~~iiiS~~ag  100 (280)
T 3tri_A           77 KMVCEELKDILSETKILVISLAVG  100 (280)
T ss_dssp             HHHHHHHHHHHHTTTCEEEECCTT
T ss_pred             HHHHHHHHhhccCCCeEEEEecCC
Confidence            8888888765 4322377776543

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=95.76  E-value=0.054  Score=40.88  Aligned_cols=36  Identities=17%  Similarity=0.278  Sum_probs=30.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~   73 (149)
                      .+++++++|.|+ ||+|..+++.|+..|.. +.+++.+
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D   67 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG   67 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCC
Confidence            356788999987 78999999999999975 7788765

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=95.74  E-value=0.092  Score=39.43  Aligned_cols=80  Identities=14%  Similarity=0.100  Sum_probs=47.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--c-----EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGA--T-----VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKR  113 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~--~-----Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  113 (149)
                      ..+.||||+|.||..++..|+..|.  .     +++++.+.. ...+.-...++..    ...... -...+.+  +   
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~-~~~~~g~a~DL~~----~~~~~~-~~~~~~~--~---   72 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPM-MGVLDGVLMELQD----CALPLL-KDVIATD--K---   72 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGG-HHHHHHHHHHHHH----TCCTTE-EEEEEES--C---
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCc-cccchhhHhhhHh----hhhccc-CCEEEcC--C---
Confidence            3599999999999999999998874  4     778887521 1233333333433    111111 1111111  1   


Q ss_pred             HHHHHHHhcCCccEEEeCCcCC
Q 044851          114 VVDEVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       114 ~~~~~~~~~g~id~li~~ag~~  135 (149)
                          ..+.+..-|++|+.||..
T Consensus        73 ----~~~~~~daDvVvitAg~p   90 (333)
T 5mdh_A           73 ----EEIAFKDLDVAILVGSMP   90 (333)
T ss_dssp             ----HHHHTTTCSEEEECCSCC
T ss_pred             ----cHHHhCCCCEEEEeCCCC
Confidence                123344689999999874

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=95.69  E-value=0.02  Score=43.24  Aligned_cols=36  Identities=14%  Similarity=0.062  Sum_probs=31.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC--cEEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~   73 (149)
                      +.++.+.|+|++|.+|..+|..++..|.  .|++++.+
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~   43 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF   43 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence            3456799999999999999999999984  69999986

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=95.67  E-value=0.096  Score=39.71  Aligned_cols=64  Identities=13%  Similarity=0.086  Sum_probs=44.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+.+++++|.|+ +.+|+.+++.+.+.|.+|++++.++....  .             ...-.++..|+.|.+.+.+++.
T Consensus         9 ~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~--~-------------~~ad~~~~~~~~d~~~l~~~~~   72 (377)
T 3orq_A            9 LKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPC--R-------------YVAHEFIQAKYDDEKALNQLGQ   72 (377)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTT--G-------------GGSSEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChh--h-------------hhCCEEEECCCCCHHHHHHHHH
Confidence            456789999985 56899999999999999999987643110  0             0011345577777776666554

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=95.67  E-value=0.039  Score=42.02  Aligned_cols=36  Identities=31%  Similarity=0.542  Sum_probs=32.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.||+++|.|. +.+|..+|+.|.+.|++|++.+++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~  205 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVN  205 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCC
Confidence            478999999986 779999999999999999988875

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.67  E-value=0.12  Score=37.49  Aligned_cols=85  Identities=15%  Similarity=0.074  Sum_probs=52.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHH-------HHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKE-------TLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      ++.|.|. |.+|..+++.|.+.|++|++++|++...+.+.+       ...+...       ...++.+-+.+...+..+
T Consensus         3 ~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-------~aDvvi~~vp~~~~~~~v   74 (287)
T 3pef_A            3 KFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVE-------SCPVTFAMLADPAAAEEV   74 (287)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHH-------HCSEEEECCSSHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHh-------cCCEEEEEcCCHHHHHHH
Confidence            5777775 889999999999999999999998544333321       0111111       122333445555667777


Q ss_pred             H---HHHHHhcCCccEEEeCCcC
Q 044851          115 V---DEVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       115 ~---~~~~~~~g~id~li~~ag~  134 (149)
                      +   +.+.....+=.++|++.+.
T Consensus        75 ~~~~~~l~~~l~~~~~vi~~st~   97 (287)
T 3pef_A           75 CFGKHGVLEGIGEGRGYVDMSTV   97 (287)
T ss_dssp             HHSTTCHHHHCCTTCEEEECSCC
T ss_pred             HcCcchHhhcCCCCCEEEeCCCC
Confidence            7   6665554444566766543

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=95.65  E-value=0.028  Score=42.23  Aligned_cols=35  Identities=23%  Similarity=0.262  Sum_probs=30.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .|.+++|+|+++++|...++.....|+.++++.+.
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~  201 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRD  201 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecC
Confidence            57899999999999999888877789998877654

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.64  E-value=0.093  Score=36.47  Aligned_cols=76  Identities=17%  Similarity=0.237  Sum_probs=47.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +.+..+++.|.| .+.+|..++..|.+.|.+|++++|++.            ..    ....+.++.+  - ...+..++
T Consensus        15 ~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~------------~~----~~aD~vi~av--~-~~~~~~v~   74 (209)
T 2raf_A           15 LYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ------------AT----TLGEIVIMAV--P-YPALAALA   74 (209)
T ss_dssp             -----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC------------CS----SCCSEEEECS--C-HHHHHHHH
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH------------Hh----ccCCEEEEcC--C-cHHHHHHH
Confidence            345667788998 688999999999999999999988743            00    2333444333  2 45667777


Q ss_pred             HHHHHhcCCccEEEeCC
Q 044851          116 DEVVNAYDRIDILVNNA  132 (149)
Q Consensus       116 ~~~~~~~g~id~li~~a  132 (149)
                      .++..... =.++|+++
T Consensus        75 ~~l~~~~~-~~~vi~~~   90 (209)
T 2raf_A           75 KQYATQLK-GKIVVDIT   90 (209)
T ss_dssp             HHTHHHHT-TSEEEECC
T ss_pred             HHHHHhcC-CCEEEEEC
Confidence            76654443 23455443

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.58  E-value=0.037  Score=40.51  Aligned_cols=36  Identities=14%  Similarity=0.165  Sum_probs=33.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      ++|+.++|.|+++-+|+.+|..|...|++|.++.++
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~  183 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK  183 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence            789999999999999999999999999999999875

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=95.58  E-value=0.048  Score=40.66  Aligned_cols=39  Identities=10%  Similarity=0.065  Sum_probs=34.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      ..+.|+++-|.|. |.||..+|+.|...|++|+.++|++.
T Consensus       135 ~~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~  173 (315)
T 3pp8_A          135 YTREEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRK  173 (315)
T ss_dssp             CCSTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCC
T ss_pred             CCcCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCch
Confidence            4578999999986 78999999999999999999998754

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=95.56  E-value=0.055  Score=40.94  Aligned_cols=36  Identities=22%  Similarity=0.361  Sum_probs=30.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKP   74 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~   74 (149)
                      +++++++|.|+ +|+|..+++.|+..|.. +.+++.+.
T Consensus       116 L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~  152 (353)
T 3h5n_A          116 LKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQ  152 (353)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCc
Confidence            56778999987 78999999999999975 88888763

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=95.53  E-value=0.045  Score=41.03  Aligned_cols=81  Identities=14%  Similarity=0.144  Sum_probs=49.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC--cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      +..++.+.|+|+ |.+|..++..|+..|.  .|++++++   ...++-...++..... ....+.+...|   .      
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~---~~k~~g~a~DL~~~~~-~~~~~~i~~~~---~------   71 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIF---KDKTKGDAIDLEDALP-FTSPKKIYSAE---Y------   71 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSC---HHHHHHHHHHHHTTGG-GSCCCEEEECC---G------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCC---hHHHHHHHhhHhhhhh-hcCCcEEEECc---H------
Confidence            345567999996 8999999999999986  68999985   3333333333432100 11122222211   1      


Q ss_pred             HHHHHHhcCCccEEEeCCcCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~  136 (149)
                           +.+..-|++|+++|...
T Consensus        72 -----~a~~~aDiVvi~ag~~~   88 (326)
T 3vku_A           72 -----SDAKDADLVVITAGAPQ   88 (326)
T ss_dssp             -----GGGTTCSEEEECCCCC-
T ss_pred             -----HHhcCCCEEEECCCCCC
Confidence                 22346799999999743

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=95.50  E-value=0.034  Score=40.99  Aligned_cols=37  Identities=11%  Similarity=0.194  Sum_probs=31.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCCh
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQED   77 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~   77 (149)
                      .|.+++|+|+ +++|...++.....|++|+.++ +..+.
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~  178 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQ  178 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhH
Confidence            5789999999 9999999988888899999888 64443

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=95.46  E-value=0.099  Score=39.41  Aligned_cols=39  Identities=23%  Similarity=0.187  Sum_probs=34.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      ..+.|+++-|.|. |.||..+|+.+...|++|+..+++..
T Consensus       167 ~~l~gktiGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~  205 (340)
T 4dgs_A          167 HSPKGKRIGVLGL-GQIGRALASRAEAFGMSVRYWNRSTL  205 (340)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             ccccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCcc
Confidence            4688999999987 78999999999999999999988754

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=95.38  E-value=0.074  Score=43.16  Aligned_cols=36  Identities=17%  Similarity=0.299  Sum_probs=30.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKP   74 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~   74 (149)
                      +++.+|+|.|+ ||+|..+++.|+..|.. +.+++.+.
T Consensus       324 L~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~  360 (615)
T 4gsl_A          324 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT  360 (615)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence            56788999987 68999999999999975 88888764

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.36  E-value=0.049  Score=40.10  Aligned_cols=37  Identities=32%  Similarity=0.373  Sum_probs=34.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++||.++|.|.++-+|+.++..|...|++|.++.++
T Consensus       158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~  194 (286)
T 4a5o_A          158 DLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRF  194 (286)
T ss_dssp             CCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            4789999999999999999999999999999998775

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.35  E-value=0.026  Score=41.51  Aligned_cols=36  Identities=25%  Similarity=0.300  Sum_probs=33.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.++++.|.|+ |.+|..+++.|...|++|++++|+
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~  189 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARS  189 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECC
Confidence            578999999996 889999999999999999999986

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.33  E-value=0.072  Score=39.03  Aligned_cols=87  Identities=11%  Similarity=0.049  Sum_probs=55.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHH----HHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETL----EMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      ++-|.| .|.+|..+++.|++.|++|++++|++...+.+.+.-    ..+.+    ... ..++..-+.+...++.+++.
T Consensus        17 ~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~----~~~-aDvvi~~vp~~~~~~~v~~~   90 (296)
T 3qha_A           17 KLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVAD----VAA-ADLIHITVLDDAQVREVVGE   90 (296)
T ss_dssp             CEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHH----HTT-SSEEEECCSSHHHHHHHHHH
T ss_pred             eEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHH----HHh-CCEEEEECCChHHHHHHHHH
Confidence            477776 578999999999999999999999866544332210    00000    011 34444556666778888877


Q ss_pred             HHHhcCCccEEEeCCcC
Q 044851          118 VVNAYDRIDILVNNAAE  134 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~  134 (149)
                      +.....+=.++|++...
T Consensus        91 l~~~l~~g~ivv~~st~  107 (296)
T 3qha_A           91 LAGHAKPGTVIAIHSTI  107 (296)
T ss_dssp             HHTTCCTTCEEEECSCC
T ss_pred             HHHhcCCCCEEEEeCCC
Confidence            76655444567766654

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=95.28  E-value=0.13  Score=39.78  Aligned_cols=37  Identities=24%  Similarity=0.258  Sum_probs=32.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      +.+.+++|+|+ |.+|...++.+...|++|+++++++.
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~  224 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPA  224 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            35678999998 78999999999999999999999754

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.27  E-value=0.17  Score=36.37  Aligned_cols=78  Identities=10%  Similarity=0.107  Sum_probs=54.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           42 VALVTGGDSGIGRAVCHCFAQE-GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      .+.|.|++|.+|+.+++.+.+. ++.++........   +.+.+    .    ...  . +.+|++.++.+...+....+
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~d---l~~~~----~----~~~--D-vvIDfT~p~a~~~~~~~a~~   67 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDP---LSLLT----D----GNT--E-VVIDFTHPDVVMGNLEFLID   67 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCC---THHHH----H----TTC--C-EEEECSCTTTHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCC---HHHHh----c----cCC--c-EEEEccChHHHHHHHHHHHH
Confidence            4899999999999999999876 7887644432221   22221    1    111  2 55799999988888877766


Q ss_pred             hcCCccEEEeCCcCC
Q 044851          121 AYDRIDILVNNAAEQ  135 (149)
Q Consensus       121 ~~g~id~li~~ag~~  135 (149)
                      .  .+++|+...|+.
T Consensus        68 ~--g~~~VigTTG~~   80 (245)
T 1p9l_A           68 N--GIHAVVGTTGFT   80 (245)
T ss_dssp             T--TCEEEECCCCCC
T ss_pred             c--CCCEEEcCCCCC
Confidence            5  578899888764

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.24  E-value=0.13  Score=39.02  Aligned_cols=91  Identities=9%  Similarity=0.128  Sum_probs=51.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHH-------HHHHHHhccCCCCCCceEEEecCCChHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKE-------TLEMLREAKTPDAKDPMAISADLGFDEN  110 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~  110 (149)
                      ++.+.+.|.| .+.+|..+|+.|.+.|+.|++++|++.....+.+       ..+++..    ......++.+=+.+. .
T Consensus        20 m~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~----~a~~~DvVi~~vp~~-~   93 (358)
T 4e21_A           20 FQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCA----KLVKPRVVWLMVPAA-V   93 (358)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHH----HSCSSCEEEECSCGG-G
T ss_pred             hcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHh----cCCCCCEEEEeCCHH-H
Confidence            3455688887 5889999999999999999999987322211110       0111111    000012233333333 6


Q ss_pred             HHHHHHHHHHhcCCccEEEeCCcC
Q 044851          111 CKRVVDEVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       111 v~~~~~~~~~~~g~id~li~~ag~  134 (149)
                      +..++..+.....+=+++|.+...
T Consensus        94 v~~vl~~l~~~l~~g~iiId~st~  117 (358)
T 4e21_A           94 VDSMLQRMTPLLAANDIVIDGGNS  117 (358)
T ss_dssp             HHHHHHHHGGGCCTTCEEEECSSC
T ss_pred             HHHHHHHHHhhCCCCCEEEeCCCC
Confidence            777777776555444566666544

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.21  E-value=0.051  Score=40.00  Aligned_cols=37  Identities=27%  Similarity=0.316  Sum_probs=34.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++||.++|.|+++-+|+.++..|...|++|.++.++
T Consensus       158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  194 (285)
T 3l07_A          158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF  194 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            4789999999999999999999999999999988765

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=95.16  E-value=0.15  Score=38.61  Aligned_cols=36  Identities=22%  Similarity=0.304  Sum_probs=31.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      +.+|+++|.|++ .+|+.+++.+.+.|.+|++++.++
T Consensus        12 ~~~k~IlIlG~G-~~g~~la~aa~~~G~~vi~~d~~~   47 (389)
T 3q2o_A           12 LPGKTIGIIGGG-QLGRMMALAAKEMGYKIAVLDPTK   47 (389)
T ss_dssp             CTTSEEEEECCS-HHHHHHHHHHHHTTCEEEEEESST
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHcCCEEEEEeCCC
Confidence            578899999865 489999999999999999988753

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=95.11  E-value=0.24  Score=37.07  Aligned_cols=78  Identities=13%  Similarity=0.114  Sum_probs=47.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC--cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .+.+.|+|+ |.+|..++..|+..|.  .|++++++   ...++....++.....-....+.+...|.            
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~---~~k~~g~a~DL~~~~~~~~~~v~i~~~~~------------   68 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVN---KEKAMGDVMDLNHGKAFAPQPVKTSYGTY------------   68 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSC---HHHHHHHHHHHHHTGGGSSSCCEEEEECG------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecc---hHHHHHHHHHHHhccccccCCeEEEeCcH------------
Confidence            346899996 9999999999999986  69999986   33333333334331000112233322221            


Q ss_pred             HHHhcCCccEEEeCCcCC
Q 044851          118 VVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~  135 (149)
                        +.+..-|++|.++|..
T Consensus        69 --~a~~~aDvVvi~ag~p   84 (326)
T 3pqe_A           69 --EDCKDADIVCICAGAN   84 (326)
T ss_dssp             --GGGTTCSEEEECCSCC
T ss_pred             --HHhCCCCEEEEecccC
Confidence              1233579999999874

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=95.06  E-value=0.02  Score=44.44  Aligned_cols=35  Identities=29%  Similarity=0.344  Sum_probs=30.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEE-EEec
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVA-FTYV   72 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi-~~~~   72 (149)
                      .+++++++|+| .+.+|...++.|.+.|+.|+ +.++
T Consensus       215 ~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~  250 (419)
T 3aoe_E          215 DLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATS  250 (419)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcC
Confidence            47899999998 78899999999999999988 6666

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=94.99  E-value=0.039  Score=40.50  Aligned_cols=36  Identities=28%  Similarity=0.326  Sum_probs=32.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.++++.|.|+ |.||..+++.|...|++|++++|+
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~  187 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARE  187 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECC
Confidence            478999999995 789999999999999999999986

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=94.99  E-value=0.042  Score=40.73  Aligned_cols=37  Identities=27%  Similarity=0.351  Sum_probs=34.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++||.++|.|+++-+|+.++..|...|++|.++.++
T Consensus       162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~  198 (300)
T 4a26_A          162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG  198 (300)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            4789999999999999999999999999999999874

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=94.93  E-value=0.25  Score=37.04  Aligned_cols=80  Identities=15%  Similarity=0.110  Sum_probs=48.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC--cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      ..+.+.|+|+ |.+|..++..|+..|.  .|++++.+   ...++....++..... .......+..  .|.+       
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~---~~~~~g~a~DL~~~~~-~~~~~~i~~~--~d~~-------   83 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVI---EDKLKGEMMDLQHGSL-FLKTPKIVSS--KDYS-------   83 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSC---HHHHHHHHHHHHHTGG-GCSCCEEEEC--SSGG-------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCC---hHHHHHHHHhhhhhhh-ccCCCeEEEc--CCHH-------
Confidence            4456899997 8999999999999986  58999986   3334433334433100 1111122211  1221       


Q ss_pred             HHHHhcCCccEEEeCCcCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~  136 (149)
                          .+..-|++|.++|...
T Consensus        84 ----~~~~aDiVvi~aG~~~   99 (331)
T 4aj2_A           84 ----VTANSKLVIITAGARQ   99 (331)
T ss_dssp             ----GGTTEEEEEECCSCCC
T ss_pred             ----HhCCCCEEEEccCCCC
Confidence                2346799999999743

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=94.93  E-value=0.36  Score=35.50  Aligned_cols=37  Identities=16%  Similarity=0.088  Sum_probs=30.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDK   78 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~   78 (149)
                      +++-|.| .|.+|..+++.|++.|++|++++|++...+
T Consensus        22 ~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~   58 (310)
T 3doj_A           22 MEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCD   58 (310)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGH
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence            3577776 578999999999999999999999854433

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=94.83  E-value=0.08  Score=39.01  Aligned_cols=38  Identities=24%  Similarity=0.273  Sum_probs=34.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      .+.|+.++|.|++.-+|+.++..|...|++|.++.++.
T Consensus       156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t  193 (288)
T 1b0a_A          156 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT  193 (288)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred             CCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            47899999999999999999999999999999998763

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=94.77  E-value=0.079  Score=42.90  Aligned_cols=36  Identities=17%  Similarity=0.278  Sum_probs=29.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~   73 (149)
                      .+++++|+|.|+ ||+|..+++.|+..|.. +.+++.+
T Consensus       324 kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D  360 (598)
T 3vh1_A          324 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG  360 (598)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            356778999876 68999999999999975 8888544

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=94.75  E-value=0.24  Score=37.19  Aligned_cols=32  Identities=22%  Similarity=0.312  Sum_probs=23.3

Q ss_pred             CEEEEec-CCCh-H--HHHHHHHHHHcCCcEEEEec
Q 044851           41 MVALVTG-GDSG-I--GRAVCHCFAQEGATVAFTYV   72 (149)
Q Consensus        41 ~~~litG-~s~g-i--g~~~a~~L~~~g~~Vi~~~~   72 (149)
                      +.++|+| |++| |  +.++|++|.++|++|..++.
T Consensus         3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~   38 (365)
T 3s2u_A            3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGT   38 (365)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEEC
Confidence            3455554 5554 3  78899999999999886664

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=94.75  E-value=0.079  Score=39.26  Aligned_cols=37  Identities=24%  Similarity=0.254  Sum_probs=34.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.|+.++|.|++.-+|+.+|..|...|++|.++.++
T Consensus       162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  198 (301)
T 1a4i_A          162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK  198 (301)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence            4789999999999999999999999999999998765

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=94.74  E-value=0.094  Score=37.55  Aligned_cols=90  Identities=12%  Similarity=0.158  Sum_probs=50.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhc-cCC---CCCCceEEEecCCChHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREA-KTP---DAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      .++.|.|+ |.+|..+++.|.+.|+. |.+++|++   +.+....+.+.-. ...   .-....++..=+ ....+..++
T Consensus        11 m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av-~~~~~~~v~   85 (266)
T 3d1l_A           11 TPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTE---ESARELAQKVEAEYTTDLAEVNPYAKLYIVSL-KDSAFAELL   85 (266)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSH---HHHHHHHHHTTCEEESCGGGSCSCCSEEEECC-CHHHHHHHH
T ss_pred             CeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCH---HHHHHHHHHcCCceeCCHHHHhcCCCEEEEec-CHHHHHHHH
Confidence            45888886 88999999999999998 77888862   2232222221100 000   011222222222 233567777


Q ss_pred             HHHHHhcCCccEEEeCCcCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~  135 (149)
                      .++.....+=.++|++.+..
T Consensus        86 ~~l~~~~~~~~ivv~~s~~~  105 (266)
T 3d1l_A           86 QGIVEGKREEALMVHTAGSI  105 (266)
T ss_dssp             HHHHTTCCTTCEEEECCTTS
T ss_pred             HHHHhhcCCCcEEEECCCCC
Confidence            77755443334677776543

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=94.74  E-value=0.28  Score=36.38  Aligned_cols=34  Identities=18%  Similarity=0.285  Sum_probs=27.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcE-EEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATV-AFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~V-i~~~~~   73 (149)
                      .|.+++|.|+ +++|...++.+...|+.+ ++++++
T Consensus       160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~  194 (346)
T 4a2c_A          160 ENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDIS  194 (346)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESC
T ss_pred             CCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEech
Confidence            5788999987 899999998888889885 566664

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=94.67  E-value=0.075  Score=40.55  Aligned_cols=39  Identities=23%  Similarity=0.131  Sum_probs=33.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCCh
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQED   77 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~   77 (149)
                      +.+++++|+|+ |.+|...++.+...|++|+++++++...
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~  208 (384)
T 1l7d_A          170 VPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATK  208 (384)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            57889999996 7999999999999999999999875443

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=94.63  E-value=0.22  Score=37.56  Aligned_cols=39  Identities=21%  Similarity=0.169  Sum_probs=34.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      ..+.||++-|.|. |.||..+|+.+...|++|+..+++..
T Consensus       169 ~~l~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~  207 (345)
T 4g2n_A          169 MGLTGRRLGIFGM-GRIGRAIATRARGFGLAIHYHNRTRL  207 (345)
T ss_dssp             CCCTTCEEEEESC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             cccCCCEEEEEEe-ChhHHHHHHHHHHCCCEEEEECCCCc
Confidence            4688999999985 78999999999999999999998753

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=94.62  E-value=0.058  Score=42.25  Aligned_cols=57  Identities=9%  Similarity=0.178  Sum_probs=39.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHH
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENC  111 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v  111 (149)
                      .++|.|+ |-+|..+|+.|.+.|+.|++++.+   .+.+....+         ...+.++..|.++++-+
T Consensus         5 ~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d---~~~~~~~~~---------~~~~~~i~Gd~~~~~~L   61 (461)
T 4g65_A            5 KIIILGA-GQVGGTLAENLVGENNDITIVDKD---GDRLRELQD---------KYDLRVVNGHASHPDVL   61 (461)
T ss_dssp             EEEEECC-SHHHHHHHHHTCSTTEEEEEEESC---HHHHHHHHH---------HSSCEEEESCTTCHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCEEEEECC---HHHHHHHHH---------hcCcEEEEEcCCCHHHH
Confidence            4788877 679999999999999999999986   222222221         12355677777776543

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=94.61  E-value=0.17  Score=37.61  Aligned_cols=34  Identities=21%  Similarity=0.310  Sum_probs=26.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQE-GATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~-g~~Vi~~~~~   73 (149)
                      .|.+++|.|+ +++|...+..+... |++|++++++
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~  197 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDIN  197 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESC
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECc
Confidence            4778999987 77777777777665 7789999886

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=94.60  E-value=0.28  Score=36.28  Aligned_cols=87  Identities=11%  Similarity=0.103  Sum_probs=51.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHH-------HHHHHHhccCCCCCCceEEEecCCChHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKE-------TLEMLREAKTPDAKDPMAISADLGFDENCK  112 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  112 (149)
                      .+++.|.|. |.+|..+++.|++.|+.|++++|++...+.+.+       ..++..       ....++.+-+.+...+.
T Consensus        31 ~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~-------~~aDvVi~~vp~~~~~~  102 (320)
T 4dll_A           31 ARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAA-------RDADIVVSMLENGAVVQ  102 (320)
T ss_dssp             CSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHH-------TTCSEEEECCSSHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHH-------hcCCEEEEECCCHHHHH
Confidence            446777765 789999999999999999999987322211110       000110       12233444455566677


Q ss_pred             HHHH--HHHHhcCCccEEEeCCcC
Q 044851          113 RVVD--EVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       113 ~~~~--~~~~~~g~id~li~~ag~  134 (149)
                      .++.  .+.....+=.++|++...
T Consensus       103 ~v~~~~~~~~~l~~~~~vi~~st~  126 (320)
T 4dll_A          103 DVLFAQGVAAAMKPGSLFLDMASI  126 (320)
T ss_dssp             HHHTTTCHHHHCCTTCEEEECSCC
T ss_pred             HHHcchhHHhhCCCCCEEEecCCC
Confidence            7765  555555444566666543

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=94.60  E-value=0.15  Score=38.63  Aligned_cols=40  Identities=15%  Similarity=0.200  Sum_probs=34.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQE   76 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~   76 (149)
                      ..+.|+++-|.|. |.||..+|+.|...|++|+..+++...
T Consensus       160 ~~l~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~  199 (351)
T 3jtm_A          160 YDLEGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQMA  199 (351)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCCC
T ss_pred             ccccCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCccC
Confidence            3588999999985 679999999999999999999987533

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=94.60  E-value=0.2  Score=37.20  Aligned_cols=33  Identities=15%  Similarity=0.283  Sum_probs=29.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CcEEEEecCC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEG--ATVAFTYVKP   74 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g--~~Vi~~~~~~   74 (149)
                      .+.|+|++|.+|..++..|+..|  ..|++++++.
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~   36 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH   36 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence            48999999999999999999888  5699999874

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=94.58  E-value=0.028  Score=40.89  Aligned_cols=36  Identities=31%  Similarity=0.388  Sum_probs=31.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+++++|.|+ |++|.++++.|.+.|++|+++.|+
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~  161 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRT  161 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECC
Confidence            356788999996 699999999999999988888886

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=94.58  E-value=0.39  Score=36.17  Aligned_cols=73  Identities=12%  Similarity=0.115  Sum_probs=47.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      .++++|+|+ +.+|..+++.+.+.|.+|++++..+.... .             ... -.++.+|..|.+.+.+++.+. 
T Consensus        11 ~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~-~-------------~~~-d~~~~~~~~d~~~l~~~~~~~-   73 (391)
T 1kjq_A           11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPA-M-------------HVA-HRSHVINMLDGDALRRVVELE-   73 (391)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGG-G-------------GGS-SEEEECCTTCHHHHHHHHHHH-
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCCch-h-------------hhc-cceEECCCCCHHHHHHHHHHc-
Confidence            357999987 46899999999999999998887643210 0             000 134556777766555554432 


Q ss_pred             HhcCCccEEEeCCc
Q 044851          120 NAYDRIDILVNNAA  133 (149)
Q Consensus       120 ~~~g~id~li~~ag  133 (149)
                          ++|+++...+
T Consensus        74 ----~~d~v~~~~e   83 (391)
T 1kjq_A           74 ----KPHYIVPEIE   83 (391)
T ss_dssp             ----CCSEEEECSS
T ss_pred             ----CCCEEEECCC
Confidence                6888887543

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=94.54  E-value=0.031  Score=46.71  Aligned_cols=35  Identities=29%  Similarity=0.279  Sum_probs=31.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .|.+++|.|+++++|...++-....|++|+++.++
T Consensus       345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~  379 (795)
T 3slk_A          345 PGESLLVHSAAGGVGMAAIQLARHLGAEVYATASE  379 (795)
T ss_dssp             TTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCG
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCh
Confidence            57889999999999999888888889999988764

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=94.48  E-value=0.39  Score=36.26  Aligned_cols=35  Identities=20%  Similarity=0.271  Sum_probs=28.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-------cEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-------TVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-------~Vi~~~~~   73 (149)
                      ..-.+.|+||+|+||+.++..|++...       .+.+++..
T Consensus        23 ~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~   64 (345)
T 4h7p_A           23 SAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIE   64 (345)
T ss_dssp             CCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCG
T ss_pred             CCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCC
Confidence            344699999999999999999988642       47777764

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=94.42  E-value=1  Score=33.78  Aligned_cols=32  Identities=22%  Similarity=0.146  Sum_probs=28.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--cEEEEecC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVK   73 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~   73 (149)
                      +.+.|+|+ |.+|..++..|+..|.  .|++++.+
T Consensus        22 ~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~   55 (330)
T 3ldh_A           22 NKITVVGC-DAVGMADAISVLMKDLADEVALVDVM   55 (330)
T ss_dssp             CEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECC
Confidence            46899998 9999999999999986  69999986

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=94.28  E-value=0.054  Score=39.77  Aligned_cols=90  Identities=11%  Similarity=0.037  Sum_probs=49.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhc-cCC---CCCCceEEEecCCChHHHHHHH-
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREA-KTP---DAKDPMAISADLGFDENCKRVV-  115 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~Dv~~~~~v~~~~-  115 (149)
                      +++.|.| .|.+|..++..|++.|++|++++|++   +..+...+.-... ...   .-....++.+-+.+...++.++ 
T Consensus         8 ~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~---~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~   83 (303)
T 3g0o_A            8 FHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNP---QACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLF   83 (303)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH---HHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCH---HHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHh
Confidence            3566775 58899999999999999999999863   2222221110000 000   0112334444555555666665 


Q ss_pred             --HHHHHhcCCccEEEeCCcC
Q 044851          116 --DEVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       116 --~~~~~~~g~id~li~~ag~  134 (149)
                        +.+.....+=.++|++...
T Consensus        84 ~~~~l~~~l~~g~ivv~~st~  104 (303)
T 3g0o_A           84 GEDGVAHLMKPGSAVMVSSTI  104 (303)
T ss_dssp             --CCCGGGSCTTCEEEECSCC
T ss_pred             ChhhHHhhCCCCCEEEecCCC
Confidence              4444444333566666543

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=94.25  E-value=0.19  Score=36.39  Aligned_cols=35  Identities=14%  Similarity=0.093  Sum_probs=28.9

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChH
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDK   78 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~   78 (149)
                      +-|.| .|.+|..+++.|++.|++|++++|++...+
T Consensus         4 I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~   38 (287)
T 3pdu_A            4 YGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCA   38 (287)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGH
T ss_pred             EEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHH
Confidence            55665 688999999999999999999999855443

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=94.25  E-value=0.058  Score=42.73  Aligned_cols=36  Identities=22%  Similarity=0.427  Sum_probs=32.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.|++++|.|+ |.||..+++.+...|++|++++++
T Consensus       271 ~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~  306 (494)
T 3ce6_A          271 LIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEID  306 (494)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            357899999996 899999999999999999999886

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=94.22  E-value=0.055  Score=39.31  Aligned_cols=32  Identities=9%  Similarity=0.184  Sum_probs=29.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      ++.|.|++|.+|..+++.|.+.|++|++++|+
T Consensus        13 ~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~   44 (286)
T 3c24_A           13 TVAILGAGGKMGARITRKIHDSAHHLAAIEIA   44 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence            69999999999999999999999999998886

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=94.12  E-value=0.4  Score=35.83  Aligned_cols=38  Identities=13%  Similarity=0.132  Sum_probs=31.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCCC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQE   76 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~~   76 (149)
                      ++.+.+.|+|+ |.+|..++..|+..|. .|+++++++..
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~   43 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGT   43 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchh
Confidence            34456899998 9999999999999998 89999997543

>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*

Probab=94.07  E-value=0.34  Score=37.17  Aligned_cols=72  Identities=13%  Similarity=0.120  Sum_probs=48.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      ++++|+|+ +.+|..+++.+.+.|..|++++..+...  ...    +.         -..+.+|+.|.+.+.+++.+.  
T Consensus        20 ~~ili~g~-g~~g~~~~~a~~~~G~~v~~v~~~~~~~--~~~----~a---------d~~~~~~~~d~~~l~~~~~~~--   81 (433)
T 2dwc_A           20 QKILLLGS-GELGKEIAIEAQRLGVEVVAVDRYANAP--AMQ----VA---------HRSYVGNMMDKDFLWSVVERE--   81 (433)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCEEEEEESSTTCH--HHH----HS---------SEEEESCTTCHHHHHHHHHHH--
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCh--hhh----hc---------ceEEECCCCCHHHHHHHHHHc--
Confidence            57999987 4799999999999999999888764321  110    11         124556777776665554432  


Q ss_pred             hcCCccEEEeCCc
Q 044851          121 AYDRIDILVNNAA  133 (149)
Q Consensus       121 ~~g~id~li~~ag  133 (149)
                         ++|+++...+
T Consensus        82 ---~~d~V~~~~e   91 (433)
T 2dwc_A           82 ---KPDAIIPEIE   91 (433)
T ss_dssp             ---CCSEEEECSS
T ss_pred             ---CCCEEEECcc
Confidence               6898887554

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=94.06  E-value=0.17  Score=36.35  Aligned_cols=35  Identities=37%  Similarity=0.498  Sum_probs=30.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+ +++|.|+ |++|..+++.|.+.|++|++++|+
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~  148 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRT  148 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECC
Confidence            3567 7999996 779999999999999999888886

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=94.00  E-value=0.033  Score=41.52  Aligned_cols=72  Identities=6%  Similarity=-0.032  Sum_probs=46.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      .+.++|.|+ +.+|..+++.|.+.|. |+++++++.   ...  +.   .      ..+.++.+|.++++.+.++     
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~---~~~--~~---~------~~~~~i~gd~~~~~~L~~a-----  173 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENV---RKK--VL---R------SGANFVHGDPTRVSDLEKA-----  173 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGG---HHH--HH---H------TTCEEEESCTTSHHHHHHT-----
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChh---hhh--HH---h------CCcEEEEeCCCCHHHHHhc-----
Confidence            346899996 8899999999999999 999987632   222  21   1      2356777888877654432     


Q ss_pred             HhcCCccEEEeCCc
Q 044851          120 NAYDRIDILVNNAA  133 (149)
Q Consensus       120 ~~~g~id~li~~ag  133 (149)
                       ...+.|.+|...+
T Consensus       174 -~i~~a~~vi~~~~  186 (336)
T 1lnq_A          174 -NVRGARAVIVDLE  186 (336)
T ss_dssp             -CSTTEEEEEECCS
T ss_pred             -ChhhccEEEEcCC
Confidence             1224566665443

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=93.91  E-value=0.49  Score=37.23  Aligned_cols=92  Identities=15%  Similarity=0.175  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHH--hc--cCC-----CC-CCceEEEecCCCh
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLR--EA--KTP-----DA-KDPMAISADLGFD  108 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~--~~--~~~-----~~-~~~~~~~~Dv~~~  108 (149)
                      ..+.+-|.| .+.+|..+|..|++.|++|++++|++.   ..++..+...  ..  ...     .. ....++.+=+-..
T Consensus        14 ~~~~IgvIG-lG~MG~~lA~~La~~G~~V~v~~r~~~---~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~   89 (480)
T 2zyd_A           14 SKQQIGVVG-MAVMGRNLALNIESRGYTVSIFNRSRE---KTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAG   89 (480)
T ss_dssp             -CBSEEEEC-CSHHHHHHHHHHHTTTCCEEEECSSHH---HHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSS
T ss_pred             CCCeEEEEc-cHHHHHHHHHHHHhCCCeEEEEeCCHH---HHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCH
Confidence            344577776 578999999999999999999998732   2222222100  00  000     00 0123333444444


Q ss_pred             HHHHHHHHHHHHhcCCccEEEeCCcC
Q 044851          109 ENCKRVVDEVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       109 ~~v~~~~~~~~~~~g~id~li~~ag~  134 (149)
                      ..+..+++++.....+=++||+....
T Consensus        90 ~~v~~vl~~l~~~l~~g~iIId~s~g  115 (480)
T 2zyd_A           90 AGTDAAIDSLKPYLDKGDIIIDGGNT  115 (480)
T ss_dssp             SHHHHHHHHHGGGCCTTCEEEECSCC
T ss_pred             HHHHHHHHHHHhhcCCCCEEEECCCC
Confidence            56777777776554433566655543

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=93.91  E-value=0.22  Score=38.78  Aligned_cols=34  Identities=21%  Similarity=0.310  Sum_probs=28.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~   73 (149)
                      ++.+++|.|+ ||+|..+++.|+..|.. +.+++.+
T Consensus        39 ~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D   73 (434)
T 1tt5_B           39 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   73 (434)
T ss_dssp             HTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECC
T ss_pred             cCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            5667999986 78999999999999975 8888643

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=93.87  E-value=0.76  Score=36.26  Aligned_cols=88  Identities=15%  Similarity=0.163  Sum_probs=53.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHH------------HHHHHhccCCCCCCceEEEecCCChH
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKET------------LEMLREAKTPDAKDPMAISADLGFDE  109 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~Dv~~~~  109 (149)
                      .+-|.| .|.+|..+|..|++.|++|++.+|++...+.+.+.            .+++..    .-....++.+-+....
T Consensus         6 kIgiIG-lG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~----~l~~aDvVil~Vp~~~   80 (484)
T 4gwg_A            6 DIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVS----KLKKPRRIILLVKAGQ   80 (484)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHH----TBCSSCEEEECSCSSH
T ss_pred             EEEEEC-hhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHh----hccCCCEEEEecCChH
Confidence            466777 58899999999999999999999974322222110            001110    0001233444455556


Q ss_pred             HHHHHHHHHHHhcCCccEEEeCCcC
Q 044851          110 NCKRVVDEVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       110 ~v~~~~~~~~~~~g~id~li~~ag~  134 (149)
                      .++.+++++.....+=++||.+...
T Consensus        81 ~v~~vl~~l~~~L~~g~iIId~st~  105 (484)
T 4gwg_A           81 AVDDFIEKLVPLLDTGDIIIDGGNS  105 (484)
T ss_dssp             HHHHHHHHHGGGCCTTCEEEECSCC
T ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCC
Confidence            7777888877665555677766544

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=93.84  E-value=0.15  Score=38.03  Aligned_cols=39  Identities=15%  Similarity=0.107  Sum_probs=34.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      ..+.++++.|.|. |.||..+|+.|...|++|++++++..
T Consensus       151 ~~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~  189 (330)
T 2gcg_A          151 YGLTQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQP  189 (330)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSC
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCc
Confidence            3578899999987 88999999999999999999998754

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=93.83  E-value=0.19  Score=47.06  Aligned_cols=35  Identities=26%  Similarity=0.343  Sum_probs=31.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .|.++||.|+++++|...++.....|++|+++..+
T Consensus      1667 ~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s 1701 (2512)
T 2vz8_A         1667 PGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGS 1701 (2512)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCC
Confidence            57899999999999999988887889999988875

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=93.73  E-value=0.17  Score=39.31  Aligned_cols=37  Identities=30%  Similarity=0.329  Sum_probs=32.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      .+.+|.++|.|. ++.|.+.|+.|.+.|+.|.+.+.+.
T Consensus         6 ~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~   42 (451)
T 3lk7_A            6 TFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKP   42 (451)
T ss_dssp             TTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred             hcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCc
Confidence            357889999998 6788889999999999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	149
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	1e-24
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	2e-24
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	3e-24
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	3e-24
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	9e-24
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-23
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	3e-23
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	5e-23
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	9e-23
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	2e-22
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	2e-22
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	3e-22
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-22
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	6e-22
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	7e-22
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	7e-22
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	2e-21
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-21
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-21
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	4e-21
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	8e-21
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	9e-21
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	1e-20
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	2e-20
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	2e-20
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-19
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	2e-19
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	2e-19
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	2e-19
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	3e-19
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	2e-18
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	3e-18
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	5e-18
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	6e-18
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	2e-17
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	5e-17
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	6e-17
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	7e-17
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	9e-17
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	9e-17
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-16
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-16
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	2e-16
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	3e-16
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-15
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-14
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-14
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	2e-14
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	2e-14
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	3e-14
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	4e-14
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	4e-14
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	5e-14
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	6e-14
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	6e-14
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	7e-14
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	8e-14
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-12
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	2e-12
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	6e-11
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	1e-10
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	2e-10
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	6e-10
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	9e-10
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	1e-08
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	3e-08
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	1e-06
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	2e-06
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.003

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 93.1 bits (231), Expect = 1e-24
 Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 9/112 (8%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           SN+L G VA++TGG  GIG A+   F +EGA V  T       + A +++    + +   
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQ--- 57

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
                    D   ++   ++ D    A+  +  LVNNA       SVE+   
Sbjct: 58  -----FFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAG-IAVNKSVEETTT 103

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 93.1 bits (231), Expect = 2e-24
 Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 4/110 (3%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +    VA++TG  +GIGRA    FA+EGA V  T    +  ++ ++ +     A     +
Sbjct: 2   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQI----LAAGVSEQ 57

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
           +  ++ AD+  D     ++   +  + ++DILVNNA         +    
Sbjct: 58  NVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTA 107

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 91.8 bits (228), Expect = 3e-24
 Identities = 38/110 (34%), Positives = 48/110 (43%), Gaps = 14/110 (12%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
              G   LVTGG  GIGRA+   FA+EGA VA   +      + KE  E +  A      
Sbjct: 2   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDL----RPEGKEVAEAIGGA------ 51

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
                  DL  +    R V+E   A  R+D+LVNNAA     GS   +  
Sbjct: 52  ---FFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAP-GSALTVRL 97

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 91.9 bits (228), Expect = 3e-24
 Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 10/110 (9%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L+  +A++TGG +GIGRA+   FA EGA +A   + P     A E    +R       +
Sbjct: 2   RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVP-----APEAEAAIRNLG----R 52

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
             + +  D+    + +    +V++ + R DILVNNA   Y     +++  
Sbjct: 53  RVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAG-IYPLIPFDELTF 101

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 90.9 bits (225), Expect = 9e-24
 Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 7/109 (6%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           LRG VALVTGG  G+G  +    A+ G +V       +E   A E  + L E    +   
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEE---ASEAAQKLTEKYGVET-- 57

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
            MA   D+   E  K++++ V   + ++D +VN A         E+   
Sbjct: 58  -MAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRR-HPAEEFPL 104

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 90.1 bits (223), Expect = 2e-23
 Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 4/97 (4%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +      ++TG  +GIGR     FAQEGA V  T    +  ++ ++ +           K
Sbjct: 2   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQII----LKSGVSEK 57

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
              ++ AD+  ++   ++++  +  + +ID+LVNNA 
Sbjct: 58  QVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAG 94

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 89.7 bits (222), Expect = 3e-23
 Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +  G   ++TG  +GIGR+    FA+EGA V  T          +ET + + +A  P A+
Sbjct: 1   RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNE---DRLEETKQQILKAGVP-AE 56

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVED 143
              A+ AD+        +++  +  + +IDILVNNA      G+   
Sbjct: 57  KINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANT 103

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 89.0 bits (220), Expect = 5e-23
 Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 5/110 (4%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +    V L+TGG SG+GRA     A EGA ++   V  +  + +K  +        PDA+
Sbjct: 1   RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAV----LETAPDAE 56

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
             +   AD+  +   +  V      + RID   NNA  + +    E    
Sbjct: 57  -VLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTA 105

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 87.8 bits (217), Expect = 9e-23
 Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 11/112 (9%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           S +L G VALV+GG  G+G +       EGA V F  +  +E K     L          
Sbjct: 1   SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL---------- 50

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
           A     +  D+      K  VD  V A+  + +LVNN A     G++ED   
Sbjct: 51  ADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNN-AGILNIGTIEDYAL 101

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 87.4 bits (216), Expect = 2e-22
 Identities = 21/104 (20%), Positives = 37/104 (35%), Gaps = 13/104 (12%)

Query: 43  ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS 102
           A+VT      G       ++ G TVA       E    K+ LE   E             
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHD----ESFKQKDELEAFAET---------YPQ 49

Query: 103 ADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
                ++    +++ V +AY ++D+LV+N     E   ++    
Sbjct: 50  LKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAV 93

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.8 bits (217), Expect = 2e-22
 Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 3/116 (2%)

Query: 31  DYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREA 90
            Y     L+G VA+VTGG +GIG+A+     + G+ V     K +  K A + L+     
Sbjct: 3   SYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQ--ANL 60

Query: 91  KTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
                   + I  ++  +E    +V   ++ + +I+ LVNN   Q+     E I  
Sbjct: 61  PPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQF-LSPAEHISS 115

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 86.6 bits (214), Expect = 3e-22
 Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 10/98 (10%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           N+L+G VALVTGG SG+G  V      EGA VAF+ +     +     L           
Sbjct: 2   NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----------G 51

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
           +  M +  D+  + +   V+  V      +++LVNNA 
Sbjct: 52  ERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAG 89

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 86.2 bits (213), Expect = 4e-22
 Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 13/110 (11%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L+    L+TG   GIGRA    FA+EGA +    ++    ++A E +            
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAH--------- 52

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
               +  D+    + +R   E +    R+D +V+ A           +  
Sbjct: 53  ---PVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITR-DNFHWKMPL 98

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.1 bits (213), Expect = 6e-22
 Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 6/111 (5%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
            + R  +ALVTG   GIG AV     Q+G  V           + +E     + A  P  
Sbjct: 6   ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTV---GNIEELAAECKSAGYPG- 61

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
              +    DL  +E+   +   + + +  +DI +NNA       ++     
Sbjct: 62  -TLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLAR-PDTLLSGST 110

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.8 bits (212), Expect = 7e-22
 Identities = 26/111 (23%), Positives = 43/111 (38%), Gaps = 11/111 (9%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
            +  G V +VTGG  GIG  +   F   GA V          +  ++ L           
Sbjct: 2   TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----------- 50

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
              + I  D+  +++ K +V E +  + R+D +VNNA         E+   
Sbjct: 51  PGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSA 101

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 85.9 bits (212), Expect = 7e-22
 Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 9/110 (8%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+G  ALVTGG  GIG A+    A  GA V          K+  E LE+ RE       +
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNE---KELDECLEIWREK----GLN 56

Query: 98  PMAISADLGFDENCKRVVDEVVNAYD-RIDILVNNAAEQYECGSVEDIDE 146
                 DL       +++  V + +D +++ILVNN A        +D  E
Sbjct: 57  VEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNN-AGVVIHKEAKDFTE 105

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 85.2 bits (210), Expect = 2e-21
 Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 10/125 (8%)

Query: 22  NPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAK 81
           + IP    P    S  L G VALVTG   GIGR +     + G  V   Y    E   A+
Sbjct: 3   DAIPGPLGP---QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTE--SAE 57

Query: 82  ETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSV 141
           E +  +++    +  D   + A++G  E+  R+ +E V  + ++DI+ +N+        V
Sbjct: 58  EVVAAIKK----NGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFG-HV 112

Query: 142 EDIDE 146
           +D+  
Sbjct: 113 KDVTP 117

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 84.7 bits (209), Expect = 2e-21
 Identities = 24/110 (21%), Positives = 40/110 (36%), Gaps = 9/110 (8%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+    LVTGG  GIG A+   FA  GA +         + +  E L   ++        
Sbjct: 6   LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN---EYELNECLSKWQKK----GFQ 58

Query: 98  PMAISADLGFDENCKRVVDEVVNAYD-RIDILVNNAAEQYECGSVEDIDE 146
                 D       ++++  V + +  ++DIL+NN           D   
Sbjct: 59  VTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRS-KPTLDYTA 107

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 84.2 bits (207), Expect = 4e-21
 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 3/96 (3%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK-DPMA 100
            A++TGG   IG ++     Q+G  V   Y     +  A+  +  L  A+   A      
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRH--SEGAAQRLVAELNAARAGSAVLCKGD 60

Query: 101 ISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQY 136
           +S      + C+ ++D    A+ R D+LVNNA+  Y
Sbjct: 61  LSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYY 96

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 84.0 bits (207), Expect = 4e-21
 Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 8/97 (8%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           N+L+  VA++TGG  GIG      F + GA V    +     +     +           
Sbjct: 2   NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVIS---- 57

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                +  D+  DE+ + +VD  +  + ++DI+  N 
Sbjct: 58  ----FVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNV 90

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 83.2 bits (205), Expect = 8e-21
 Identities = 25/109 (22%), Positives = 38/109 (34%), Gaps = 7/109 (6%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
                 +VTGG+ GIG A     A  GA VA  Y       DA E  E + +      K 
Sbjct: 7   FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRS---AADAVEVTEKVGKEFGVKTK- 62

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
             A   D+   +   + + ++      I  L+ NA          ++  
Sbjct: 63  --AYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVK-PATELTH 108

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 82.9 bits (204), Expect = 9e-21
 Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 6/112 (5%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
           S  L G VAL TG   GIGR +     + GA+V   Y      K A+E +  L++     
Sbjct: 1   SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGS--SSKAAEEVVAELKKLGA-- 56

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
               +AI AD+        + D+ V+ +  +D +++N+  +  C  +E   E
Sbjct: 57  --QGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQE 106

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 82.4 bits (203), Expect = 1e-20
 Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 7/97 (7%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L G  A++TG  +GIG+ +   FA  GA+V  + +       A   ++ +++       
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADA---ANHVVDEIQQLG----G 60

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
              A   D+  ++    + D  ++   ++DILVNNA 
Sbjct: 61  QAFACRCDITSEQELSALADFAISKLGKVDILVNNAG 97

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.4 bits (203), Expect = 2e-20
 Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 5/106 (4%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
           G VALVTG   GIGRA       +GA VA      +     K  L      +  + +  +
Sbjct: 3   GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALH-----EQFEPQKTL 57

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDID 145
            I  D+   +  +    +VV+ + R+DILVNNA    E    + + 
Sbjct: 58  FIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQ 103

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 82.7 bits (204), Expect = 2e-20
 Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 2/110 (1%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +  G V LVTG   G+GRA    FA+ GA V    +        K +     +      +
Sbjct: 4   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGS-SAADKVVEEIRR 62

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
                 A+    E  +++V   ++ + RID++VNNA    +  S   I +
Sbjct: 63  RGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRD-RSFSRISD 111

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 80.0 bits (197), Expect = 1e-19
 Identities = 29/110 (26%), Positives = 41/110 (37%), Gaps = 9/110 (8%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G  ALVTGG  GIG  +    A  GA+V       +E  D                  
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWR-------SKGFK 58

Query: 98  PMAISADLGFDENCKRVVDEVVNAY-DRIDILVNNAAEQYECGSVEDIDE 146
             A   DL      + +++ V N +  +++ILVNNA         +D   
Sbjct: 59  VEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIY-KEAKDYTV 107

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 79.4 bits (195), Expect = 2e-19
 Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 10/100 (10%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L G   LVTG  SGIGRA    FA+EGA++     + +   +A   LE           
Sbjct: 2   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE----------A 51

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQY 136
           + +A+ AD+   +  + V  E +  + R+  + + A   +
Sbjct: 52  EAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAH 91

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 79.3 bits (195), Expect = 2e-19
 Identities = 26/111 (23%), Positives = 37/111 (33%), Gaps = 10/111 (9%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           N L G   ++TGG  G+G          GA V    V  +E       L           
Sbjct: 1   NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----------G 50

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
                   D+  +E+ +RVV      +  +D LVNNA          +  E
Sbjct: 51  DAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVE 101

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 80.2 bits (197), Expect = 2e-19
 Identities = 29/127 (22%), Positives = 49/127 (38%), Gaps = 9/127 (7%)

Query: 24  IPQFTSP---DYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA 80
             +F SP      P N  +G VA +TGG +G+G+ +    +  GA       K       
Sbjct: 6   QSKFFSPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDV---L 62

Query: 81  KETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGS 140
           K T E +            AI  D+   +  +  V E++      +I++NNAA  +   +
Sbjct: 63  KATAEQISSQTGNKVH---AIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPT 119

Query: 141 VEDIDES 147
                 +
Sbjct: 120 ERLSPNA 126

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 79.0 bits (194), Expect = 3e-19
 Identities = 22/94 (23%), Positives = 49/94 (52%), Gaps = 6/94 (6%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G V ++TG  +G+G+++   FA E A V   Y   ++  +A   LE +++       +
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKED--EANSVLEEIKKVG----GE 58

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNN 131
            +A+  D+  + +   +V   +  + ++D+++NN
Sbjct: 59  AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINN 92

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 76.4 bits (187), Expect = 2e-18
 Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 5/94 (5%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L+G VA+VTG  SGIG  +    A +GA +        +  + ++    L          
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG--DAAEIEKVRAGLAAQHGVKV-- 57

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNN 131
            +   ADL   E  + +VD  V    RIDILVNN
Sbjct: 58  -LYDGADLSKGEAVRGLVDNAVRQMGRIDILVNN 90

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.8 bits (186), Expect = 3e-18
 Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 7/109 (6%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           + G + L+TG   GIGR   + FA+  + +    +        +ET    +         
Sbjct: 5   VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINK---HGLEETAAKCKGL----GAK 57

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
                 D    E+      +V      + ILVNNA   Y        D 
Sbjct: 58  VHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDP 106

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 75.4 bits (185), Expect = 5e-18
 Identities = 23/96 (23%), Positives = 34/96 (35%), Gaps = 15/96 (15%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
             G+ ALVTG   GIGR         GA V        +     +    +          
Sbjct: 3   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIE--------- 53

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
              +  DLG  +      ++ +     +D+LVNNAA
Sbjct: 54  --PVCVDLGDWD----ATEKALGGIGPVDLLVNNAA 83

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 75.8 bits (186), Expect = 6e-18
 Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 10/97 (10%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           KL+G   L+TGG SG+GRA+   F  EGA VA      +           L E +T    
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAER----------LAELETDHGD 51

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
           + + I  D+   E+ K+     V  + +ID L+ NA 
Sbjct: 52  NVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAG 88

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 74.1 bits (181), Expect = 2e-17
 Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 7/95 (7%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           VALVTG   GIG+A+     ++G  VA        D  AK     + +A        +A+
Sbjct: 3   VALVTGAGQGIGKAIALRLVKDGFAVAIADYN---DATAKAVASEINQAG----GHAVAV 55

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQY 136
             D+   +     V++        D++VNNA    
Sbjct: 56  KVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAP 90

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 72.8 bits (178), Expect = 5e-17
 Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 7/107 (6%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
             VALVTG  SGIG  +     +EG  V          +  + TL+ LREA      +  
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGE---EGLRTTLKELREAGV----EAD 54

Query: 100 AISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
             + D+      + +V  VV  Y  +D+LVNNA       + E  DE
Sbjct: 55  GRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADE 101

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.3 bits (177), Expect = 6e-17
 Identities = 25/109 (22%), Positives = 36/109 (33%), Gaps = 16/109 (14%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L G   LVTG   GIGR         GA V           D    +      +      
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ---ADLDSLVRECPGIE------ 55

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
              +  DLG  E      +  + +   +D+LVNNAA         ++ +
Sbjct: 56  --PVCVDLGDWEA----TERALGSVGPVDLLVNNAAVAL-LQPFLEVTK 97

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 72.5 bits (177), Expect = 7e-17
 Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 7/102 (6%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           K  G V LVTG    IG A     A+EG  +A   +     +  ++    +RE       
Sbjct: 2   KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNR---EALEKAEASVREKGV---- 54

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYEC 138
           +  +   D+  +E     VD VV  + +ID L NNA  Q   
Sbjct: 55  EARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAF 96

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 72.8 bits (177), Expect = 9e-17
 Identities = 28/117 (23%), Positives = 42/117 (35%), Gaps = 13/117 (11%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKE------------TLEMLRE 89
           VALVTG    +GR++      EG  V   Y +   + +A              T++    
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 90  AKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
                       SA +     C  +V      + R D+LVNNA+  Y    +   DE
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDE 119

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 72.1 bits (176), Expect = 9e-17
 Identities = 24/113 (21%), Positives = 37/113 (32%), Gaps = 21/113 (18%)

Query: 34  PSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTP 93
           P         LVTGG+ GIG A+    A +G  VA T+      K               
Sbjct: 3   PP--FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL------------- 47

Query: 94  DAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
                  +  D+   +   R    V      +++LV+N A       +  + E
Sbjct: 48  -----FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN-AGLSADAFLMRMTE 94

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 71.6 bits (175), Expect = 1e-16
 Identities = 27/113 (23%), Positives = 40/113 (35%), Gaps = 26/113 (23%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           +R    LV     GIGRAV    +QEGA V       +  K +                 
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHR-------------- 47

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQ----YECGSVEDIDE 146
              +  DL      ++ +D +      +DILV NA       ++  + ED  E
Sbjct: 48  --YVVCDL------RKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKE 92

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 71.8 bits (175), Expect = 1e-16
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 10/95 (10%)

Query: 37  KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
           +L G  AL+TG   GIGRA    + +EGA VA   +  +  +     +            
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIG----------P 51

Query: 97  DPMAISADLGFDENCKRVVDEVVNAYDRIDILVNN 131
              AI+ D+    +  R V E+++ +  IDILVNN
Sbjct: 52  AACAIALDVTDQASIDRCVAELLDRWGSIDILVNN 86

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 71.2 bits (174), Expect = 2e-16
 Identities = 13/110 (11%), Positives = 30/110 (27%), Gaps = 11/110 (10%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           L     +      GIG        +          + +      E   +  +        
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNI----- 57

Query: 98  PMAISADLGFD-ENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
               + D+       K+++ ++ +    +DIL+N A           I+ 
Sbjct: 58  -TFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL----DDHQIER 102

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 70.6 bits (172), Expect = 3e-16
 Identities = 25/111 (22%), Positives = 40/111 (36%), Gaps = 10/111 (9%)

Query: 38  LRGMVALVTG--GDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           L G  ALV G      +G A+     + GA VA +Y   +   +A++  E          
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEA--------L 57

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
              +   AD+  DE    +   V  A+  +D LV+  A            +
Sbjct: 58  GGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYID 108

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 67.9 bits (165), Expect = 3e-15
 Identities = 18/109 (16%), Positives = 27/109 (24%), Gaps = 19/109 (17%)

Query: 40  GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPM 99
               LV GG   +G      F      VA   V   E+  A                   
Sbjct: 2   ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASV----------------- 44

Query: 100 AISADLGFDENCKRVVDEVVNAY--DRIDILVNNAAEQYECGSVEDIDE 146
            +     F E   +V  EV       ++D ++  A       +      
Sbjct: 45  IVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLF 93

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 66.3 bits (161), Expect = 1e-14
 Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 6/97 (6%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           V +VTG   GIG+A+     + G  V   Y +    K A+E  + +           +  
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYAR--SAKAAEEVSKQIEAYG----GQAITF 56

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYEC 138
             D+  + + + ++   ++A+  ID++VNNA    + 
Sbjct: 57  GGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDT 93

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 66.3 bits (161), Expect = 1e-14
 Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 10/101 (9%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
             G +ALVTG   GIGRA+    A  GA V  T       +   + L            +
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG----------AN 51

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYEC 138
              +  ++    + + V++++   +  +DILVNNA    + 
Sbjct: 52  GKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDN 92

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.4 bits (161), Expect = 2e-14
 Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 9/109 (8%)

Query: 40  GM-VALVTGGDSGIGRAVCHCFAQE-GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           G+ VALVTGG+ GIG A+     +     V  T          +  ++ L+         
Sbjct: 2   GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDV---TRGQAAVQQLQAEGL----S 54

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
           P     D+   ++ + + D +   Y  +D+LVNNA   ++         
Sbjct: 55  PRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHI 103

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.9 bits (160), Expect = 2e-14
 Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 17/111 (15%)

Query: 36  NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
            +L G V ++T    GIG+A    FA+EGA V  T                + E+K  + 
Sbjct: 2   GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATD---------------INESKLQEL 46

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
           +    I   +  D   K+ +D+  N  +R+D+L N A   +  G+V D +E
Sbjct: 47  EKYPGIQTRV-LDVTKKKQIDQFANEVERLDVLFNVAGFVH-HGTVLDCEE 95

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 65.7 bits (159), Expect = 3e-14
 Identities = 17/106 (16%), Positives = 35/106 (33%), Gaps = 25/106 (23%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           + +++G  +GIG A        G  +    ++  E                        +
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE------------------------V 38

Query: 102 SADLGFDENCKRVVDEVV-NAYDRIDILVNNAAEQYECGSVEDIDE 146
            ADL   E  K+ + +V+      +D LV  A    +   + ++  
Sbjct: 39  IADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVS 84

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 65.2 bits (158), Expect = 4e-14
 Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 14/121 (11%)

Query: 35  SNKLRGMVALVTGGDSGIGRAVCHCFAQ---EGATVAFTYVKPQEDKDAKETLEMLREAK 91
           ++ L   V ++TG   G GRA+    A+    G+ +  +       +  KE L     A+
Sbjct: 1   ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEEL----GAQ 56

Query: 92  TPDAKDPMAISADLGFDENCKRVV----DEVVNAYDRIDILVNNAAEQY--ECGSVEDID 145
            PD K  +  +ADLG +   +R++    +       +  +L+NNAA       G +   D
Sbjct: 57  QPDLK-VVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVND 115

Query: 146 E 146
            
Sbjct: 116 L 116

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 64.9 bits (157), Expect = 4e-14
 Identities = 18/108 (16%), Positives = 37/108 (34%), Gaps = 10/108 (9%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
             +VTG + GIG  +     ++             +K        L+  K         +
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEK-----ATELKSIKDSRVH---VL 56

Query: 102 SADLGFDENCKRVVDEVVNAY--DRIDILVNNAAEQYECGSVEDIDES 147
              +  D++    V +V      D + +L+NNA      G+  + + +
Sbjct: 57  PLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRA 104

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 64.8 bits (157), Expect = 5e-14
 Identities = 24/90 (26%), Positives = 36/90 (40%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
           + L+TG   GIGRA+   FA+                     LE +      +      I
Sbjct: 3   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 62

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNN 131
           +AD+    + +R+   +V  Y  ID LVNN
Sbjct: 63  TADISDMADVRRLTTHIVERYGHIDCLVNN 92

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.8 bits (157), Expect = 6e-14
 Identities = 24/121 (19%), Positives = 42/121 (34%), Gaps = 7/121 (5%)

Query: 26  QFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLE 85
           Q  + ++ P   L+G   +VTG   GIGR + +  A+ GA V  T       +  ++ + 
Sbjct: 1   QPLNEEFRP-EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSK---ETLQKVVS 56

Query: 86  MLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDID 145
              E     A        D       ++ V +       +D+L+ N           D  
Sbjct: 57  HCLELGAASAHYIAGTMED---MTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDI 113

Query: 146 E 146
            
Sbjct: 114 H 114

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 64.5 bits (156), Expect = 6e-14
 Identities = 21/98 (21%), Positives = 32/98 (32%), Gaps = 10/98 (10%)

Query: 37  KLRGMVALVTGGDS--GIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
            L G   LVTG  S   I   +     +EGA +AFTY   +     +E    L       
Sbjct: 2   FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQ 61

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNA 132
                  S           +  E+   + + D  V++ 
Sbjct: 62  CDVAEDAS--------IDTMFAELGKVWPKFDGFVHSI 91

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 64.7 bits (156), Expect = 7e-14
 Identities = 20/104 (19%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 37  KLRGMVALVTG--GDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPD 94
            L+G   L+ G   +  I   +      +GAT+AFTY+    ++  ++ +  + +    +
Sbjct: 2   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYL----NESLEKRVRPIAQ----E 53

Query: 95  AKDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYEC 138
              P     D+  +E+ K + + V      +D +V++ A   + 
Sbjct: 54  LNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKE 97

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 64.3 bits (156), Expect = 8e-14
 Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
               VALVTG   GIGR +    A+  + V          K     ++ ++        +
Sbjct: 8   GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQ---KSCDSVVDEIKSFG----YE 60

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
               + D+   E    V+++++  +  +DILVNNA    +   +   ++
Sbjct: 61  SSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKND 109

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 61.0 bits (147), Expect = 1e-12
 Identities = 13/106 (12%), Positives = 35/106 (33%), Gaps = 19/106 (17%)

Query: 43  ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAIS 102
            +V GG   +G A+   F + G TV    +   +  D+   ++                 
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVD----------------- 47

Query: 103 ADLGFDENCKRVVDEVVNA--YDRIDILVNNAAEQYECGSVEDIDE 146
            +  + E  + ++++  ++    ++D +   A       +      
Sbjct: 48  GNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFV 93

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.3 bits (145), Expect = 2e-12
 Identities = 13/47 (27%), Positives = 24/47 (51%)

Query: 38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETL 84
          ++G+VA++TGG SG+G A       +GA+     +     +   + L
Sbjct: 3  VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL 49

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 56.7 bits (135), Expect = 6e-11
 Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 4/55 (7%)

Query: 35 SNKLRGMVALVTG--GDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEML 87
          +  L G   LV+G   DS I   +     ++GA +  T       +  +   + L
Sbjct: 1  TGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGF--DRLRLIQRITDRL 53

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 56.1 bits (133), Expect = 1e-10
 Identities = 15/124 (12%), Positives = 35/124 (28%), Gaps = 27/124 (21%)

Query: 42  VALVTG--GDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD-- 97
           +  + G    +G G  +    ++    + F    P  +   K       +      KD  
Sbjct: 4   ICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKK 63

Query: 98  -----------------------PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAE 134
                                        ++  +   + V + +   Y +I++LV++ A 
Sbjct: 64  MNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLAN 123

Query: 135 QYEC 138
             E 
Sbjct: 124 AKEV 127

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 54.8 bits (130), Expect = 2e-10
 Identities = 19/98 (19%), Positives = 29/98 (29%), Gaps = 5/98 (5%)

Query: 38  LRGMVALVTG--GDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA 95
           LRG  A + G   D+G G AV    A  GA +      P  +        + R       
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFET---SLRRGKFDQSR 62

Query: 96  KDPMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAA 133
             P     ++        V D   +  + +      A 
Sbjct: 63  VLPDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAG 100

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 53.3 bits (127), Expect = 6e-10
 Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 19/90 (21%)

Query: 42  VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAI 101
            ALVTGG SG+GRA        G  V    ++                    + +D + +
Sbjct: 3   SALVTGGASGLGRAAALALKARGYRVVVLDLR-------------------REGEDLIYV 43

Query: 102 SADLGFDENCKRVVDEVVNAYDRIDILVNN 131
             D+  +E+ +R V           ++   
Sbjct: 44  EGDVTREEDVRRAVARAQEEAPLFAVVSAA 73

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 9e-10
 Identities = 14/55 (25%), Positives = 20/55 (36%)

Query: 42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK 96
          V L+TG  SGIG  +    A + +     Y   ++ K      E  R    P   
Sbjct: 4  VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGS 58

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 50.0 bits (118), Expect = 1e-08
 Identities = 13/49 (26%), Positives = 19/49 (38%), Gaps = 1/49 (2%)

Query: 42 VALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLRE 89
            LVTGG  G+G  +    A+ GA  +        +   A E +  L  
Sbjct: 11 TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEA 59

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 48.5 bits (114), Expect = 3e-08
 Identities = 12/91 (13%), Positives = 21/91 (23%), Gaps = 7/91 (7%)

Query: 41  MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMA 100
           M   + GG   +G+ +    A  G  +     +        E  E         A D   
Sbjct: 1   MRVALLGGTGNLGKGLALRLATLGHEIVVGSRRE-------EKAEAKAAEYRRIAGDASI 53

Query: 101 ISADLGFDENCKRVVDEVVNAYDRIDILVNN 131
                        +    +     ID   + 
Sbjct: 54  TGMKNEDAAEACDIAVLTIPWEHAIDTARDL 84

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 44.3 bits (103), Expect = 1e-06
 Identities = 8/53 (15%), Positives = 19/53 (35%), Gaps = 3/53 (5%)

Query: 43 ALVTGGDSGIGRAVCHCF---AQEGATVAFTYVKPQEDKDAKETLEMLREAKT 92
           L+TG + G+G  +        Q    +  T    ++ K+ ++  +       
Sbjct: 5  ILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHI 57

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 43.3 bits (101), Expect = 2e-06
 Identities = 11/109 (10%), Positives = 24/109 (22%), Gaps = 15/109 (13%)

Query: 38  LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD 97
           ++G  A+V  G   +G       A      A   +  ++   A+   + + +    +   
Sbjct: 21  VKGKKAVVLAGTGPVGMRSAALLAG---EGAEVVLCGRKLDKAQAAADSVNKRFKVNVTA 77

Query: 98  PMAISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
                                  A      +    A   E         
Sbjct: 78  AETAD------------DASRAEAVKGAHFVFTAGAIGLELLPQAAWQN 114

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 34.6 bits (78), Expect = 0.003
 Identities = 23/106 (21%), Positives = 36/106 (33%), Gaps = 11/106 (10%)

Query: 41  MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMA 100
           M  LVTGG   IG   C    Q G  V         D        +L   +    K P  
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIIL------DNLCNSKRSVLPVIERLGGKHPTF 54

Query: 101 ISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE 146
           +  D+  +     ++ +       ID +++ A  +    SV+   E
Sbjct: 55  VEGDIRNEALMTEILHD-----HAIDTVIHFAGLKAVGESVQKPLE 95

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	149
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.89
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.89
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.89
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.89
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.89
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.89
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.88
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.88
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.88
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.88
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.88
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.88
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.88
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.88
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.87
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.87
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.87
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.87
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.87
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.87
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.87
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.87
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.86
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.86
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.86
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.86
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.86
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.86
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.85
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.85
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.85
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.85
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.85
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.85
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.85
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.85
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.84
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.84
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.82
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.81
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.81
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.81
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.81
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.81
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.79
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.79
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.78
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.77
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.76
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.76
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.75
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.74
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.71
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.71
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.7
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.69
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.68
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.61
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.61
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.6
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.58
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.58
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.56
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.52
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.51
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.27
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.22
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.2
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.2
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.19
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.17
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.17
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.15
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.11
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.08
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	98.91
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	98.9
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.88
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	98.84
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	98.81
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.79
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	98.77
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.75
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	98.75
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	98.69
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	98.66
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	98.63
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.58
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.53
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	98.53
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	98.48
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	98.39
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	98.37
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.23
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	98.15
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.12
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	97.98
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.88
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.83
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.78
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.67
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.66
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.62
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.6
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.59
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	97.57
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.55
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.54
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.52
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.51
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.43
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.38
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.36
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.34
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.27
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.1
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.09
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.03
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.95
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.92
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.9
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	96.9
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.9
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.88
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.87
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.85
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.83
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.8
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.78
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.71
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.62
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.58
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.58
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.53
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.52
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.48
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.31
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.29
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.18
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.17
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	96.13
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.13
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.08
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	95.83
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.78
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	95.73
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	95.68
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.67
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	95.66
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.5
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.27
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.2
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	95.17
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	94.99
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.9
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.85
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	94.84
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.8
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	94.77
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	94.72
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.71
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.71
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	94.62
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	94.55
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	94.49
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.41
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	94.33
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.19
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.8
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.73
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	93.6
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.6
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	93.57
d1kl7a_	511	Threonine synthase {Baker's yeast (Saccharomyces c	93.46
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	93.39
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	93.29
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.24
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	93.22
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	93.22
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	93.14
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.14
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	92.99
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	92.94
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	92.92
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	92.92
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	92.9
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	92.79
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	92.72
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	92.59
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	92.53
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.52
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.49
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	92.45
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	92.43
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.42
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	92.37
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	92.35
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	92.24
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	92.08
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	92.08
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	92.04
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.01
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	91.87
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	91.83
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	91.67
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	91.56
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	91.56
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	91.28
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	91.27
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	91.27
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	91.18
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	91.13
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	90.97
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	90.88
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	90.81
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	90.75
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	90.7
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	90.53
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	90.49
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	90.48
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	90.08
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	89.94
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	89.93
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	89.91
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	89.69
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	89.68
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	89.62
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	89.53
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	89.51
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	89.5
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	89.41
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	89.32
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	88.95
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	88.92
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	88.86
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	88.7
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	88.7
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	88.61
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	88.42
d1qh8b_	519	Nitrogenase iron-molybdenum protein, beta chain {K	88.13
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	87.84
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	87.79
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	87.78
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	87.58
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	87.39
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	87.32
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	87.17
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	87.11
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	87.03
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	87.0
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	86.95
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	86.63
d2afhe1	289	Nitrogenase iron protein {Azotobacter vinelandii [	86.36
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	86.12
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	85.96
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	85.62
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	85.54
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	85.5
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	85.28
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	85.25
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	85.01
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	84.9
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	84.71
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	84.3
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	84.08
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	83.93
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	83.59
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	83.51
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	83.41
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	83.12
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	83.11
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	82.93
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	82.82
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	82.79
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	82.62
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	82.6
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	82.46
d2ax3a2	211	Hypothetical protein TM0922, N-terminal domain {Th	82.26
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	81.99
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	81.96
d1m1na_	477	Nitrogenase iron-molybdenum protein, alpha chain {	81.86
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	81.6
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	81.44
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	81.26
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	81.2
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	81.16
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	80.79
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	80.69
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	80.56
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	80.52
d1m1nb_	522	Nitrogenase iron-molybdenum protein, beta chain {A	80.41
d1miob_	457	Nitrogenase iron-molybdenum protein, beta chain {C	80.37
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	80.26

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.89  E-value=2e-23  Score=151.05  Aligned_cols=107  Identities=28%  Similarity=0.438  Sum_probs=92.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +.++||++|||||++|||+++|++|++.|++|++++|+   .+++.+..+++...   .+.++.++.+|+++++++++++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~---~~~~~~~~~~l~~~---~g~~~~~~~~Dv~~~~~v~~~~   74 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN---LEEASEAAQKLTEK---YGVETMAFRCDVSNYEEVKKLL   74 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHH---HCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHHH---hCCcEEEEEccCCCHHHHHHHH
Confidence            45899999999999999999999999999999999997   45555555555432   3567888999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      +++.+++|+||+||||||+... +++.+++.++|
T Consensus        75 ~~~~~~~g~iDiLVnnAG~~~~-~~~~~~~~e~~  107 (251)
T d1vl8a_          75 EAVKEKFGKLDTVVNAAGINRR-HPAEEFPLDEF  107 (251)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCC-CCGGGCCHHHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCC-CChhhCCHHHH
Confidence            9999999999999999998765 78988887764

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.89  E-value=4.7e-23  Score=149.78  Aligned_cols=106  Identities=29%  Similarity=0.415  Sum_probs=93.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +|+||++|||||++|||+++|+.|++.|++|++++|+   .+.+++..+++..    .+.++..+.||++++++++++++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~---~~~l~~~~~~~~~----~g~~~~~~~~Dv~~~~~v~~~~~   74 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMN---REALEKAEASVRE----KGVEARSYVCDVTSEEAVIGTVD   74 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHT----TTSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHH
Confidence            5899999999999999999999999999999999997   5556666666665    56678899999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++.+++|++|+||||||+.....++.+++.++|
T Consensus        75 ~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~  107 (260)
T d1zema1          75 SVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDF  107 (260)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHH
T ss_pred             HHHHHhCCCCeehhhhccccccCccccccHHHH
Confidence            999999999999999998765568888887664

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.89  E-value=4.3e-23  Score=149.27  Aligned_cols=105  Identities=28%  Similarity=0.398  Sum_probs=91.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ++|+||++|||||++|||+++|++|++.|++|++++|+   .+.+++..+++.     ...++.++.+|+++++++++++
T Consensus         2 nrL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~---~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~   73 (251)
T d1zk4a1           2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRH---SDVGEKAAKSVG-----TPDQIQFFQHDSSDEDGWTKLF   73 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHC-----CTTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHhC-----CCCcEEEEEccCCCHHHHHHHH
Confidence            46899999999999999999999999999999999996   444555555543     3456888999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      +++.+++|++|+||||||+... +++.+++.++|
T Consensus        74 ~~~~~~~G~iDiLVnnAg~~~~-~~~~~~~~~~~  106 (251)
T d1zk4a1          74 DATEKAFGPVSTLVNNAGIAVN-KSVEETTTAEW  106 (251)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCC-CCTTTCCHHHH
T ss_pred             HHHHHHhCCceEEEeccccccc-cchhcccccch
Confidence            9999999999999999999876 78988887764

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.89  E-value=5.5e-23  Score=149.11  Aligned_cols=103  Identities=29%  Similarity=0.409  Sum_probs=91.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .||++|||||++|||+++|++|++.|++|++++|+   .+.+++..+++..    .+.++.++.+|++++++++++++++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~---~~~l~~~~~~l~~----~g~~~~~~~~Dvs~~~~v~~~~~~~   73 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARG---EEGLRTTLKELRE----AGVEADGRTCDVRSVPEIEALVAAV   73 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHh----cCCcEEEEEeecCCHHHHHHHHHHH
Confidence            37999999999999999999999999999999997   5566677777766    5667889999999999999999999


Q ss_pred             HHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          119 VNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      .+++|+||+||||||+... .++.+++.++|
T Consensus        74 ~~~~g~iDilVnnAG~~~~-~~~~~~~~e~~  103 (257)
T d2rhca1          74 VERYGPVDVLVNNAGRPGG-GATAELADELW  103 (257)
T ss_dssp             HHHTCSCSEEEECCCCCCC-SCGGGCCHHHH
T ss_pred             HHHhCCCCEEEecccccCC-CChHHcCHHHH
Confidence            9999999999999999776 78888887654

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.89  E-value=2.1e-23  Score=151.49  Aligned_cols=108  Identities=24%  Similarity=0.371  Sum_probs=91.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +|+||++|||||++|||+++|++|++.|++|++++|+   .+.+++..+++....  .+.++.++.||++|+++++++++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~---~~~l~~~~~~~~~~~--~~~~~~~~~~Dvt~~~~v~~~~~   75 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS---SEGLEASKAAVLETA--PDAEVLTTVADVSDEAQVEAYVT   75 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHHC--TTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHhhC--CCCeEEEEeccCCCHHHHHHHHH
Confidence            3789999999999999999999999999999999997   444555555554311  34567889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++.+++|++|+||||||+.....++.+++.++|
T Consensus        76 ~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~  108 (258)
T d1iy8a_          76 ATTERFGRIDGFFNNAGIEGKQNPTESFTAAEF  108 (258)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHH
T ss_pred             HHHHHhCCCCEEEECCcccccCCchhhhhhhHH
Confidence            999999999999999998766567888887664

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.89  E-value=7.7e-23  Score=147.94  Aligned_cols=107  Identities=21%  Similarity=0.307  Sum_probs=94.0

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           35 SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        35 ~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .+.+++|++|||||++|||+++|++|++.|++|++++|+   .+.+++..+++..    .+.++.++.+|++++++++++
T Consensus         5 ~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~---~~~l~~~~~~l~~----~g~~~~~~~~Dvt~~~~v~~~   77 (251)
T d2c07a1           5 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRT---QKSCDSVVDEIKS----FGYESSGYAGDVSKKEEISEV   77 (251)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESS---HHHHHHHHHHHHT----TTCCEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC---HHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHH
Confidence            457899999999999999999999999999999999996   5566667777765    566788999999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++++.+++|++|+||||||+... .++.+.+.++|
T Consensus        78 ~~~~~~~~g~iDilvnnag~~~~-~~~~~~~~~~~  111 (251)
T d2c07a1          78 INKILTEHKNVDILVNNAGITRD-NLFLRMKNDEW  111 (251)
T ss_dssp             HHHHHHHCSCCCEEEECCCCCCC-CCTTTCCHHHH
T ss_pred             HHHHHHhcCCceeeeeccccccc-cccccccHHHH
Confidence            99999999999999999999776 67888776654

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.88  E-value=6.1e-23  Score=149.29  Aligned_cols=106  Identities=24%  Similarity=0.486  Sum_probs=92.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .++||++|||||++|||+++|++|++.|++|++++|+.  ...++...+++..    .+.++.++.+|++++++++++++
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~--~~~~~~~~~~~~~----~g~~~~~~~~Dvt~~~~v~~~~~   77 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSK--EDEANSVLEEIKK----VGGEAIAVKGDVTVESDVINLVQ   77 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHH----TTCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc--HHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHH
Confidence            48999999999999999999999999999999999973  3445566666665    56678889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++.+++|+||+||||||+..+ .++.+++.++|
T Consensus        78 ~~~~~~G~iDiLVnnAG~~~~-~~~~~~~~~~~  109 (261)
T d1geea_          78 SAIKEFGKLDVMINNAGLENP-VSSHEMSLSDW  109 (261)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC-CCGGGCCHHHH
T ss_pred             HHHHHhCCCCEeeccceecCC-cchhhcCHHHH
Confidence            999999999999999999876 78888887764

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.88  E-value=1.2e-22  Score=147.59  Aligned_cols=106  Identities=28%  Similarity=0.366  Sum_probs=93.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +.++||++|||||++|||+++|++|++.|++|++++|+   .+.+++..+++..    .+..+.++.+|+++++++++++
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~---~~~l~~~~~~~~~----~g~~~~~~~~Dv~~~~~v~~~~   76 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRN---QKELNDCLTQWRS----KGFKVEASVCDLSSRSERQELM   76 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHh----cCCCceEEEeeCCCHHHHHHHH
Confidence            56899999999999999999999999999999999996   5566777777766    5667788999999999999999


Q ss_pred             HHHHHhcC-CccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYD-RIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       116 ~~~~~~~g-~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      +++.++++ ++|+||||||+... .++.+++.++|
T Consensus        77 ~~~~~~~~~~idilvnnAG~~~~-~~~~~~~~e~~  110 (259)
T d2ae2a_          77 NTVANHFHGKLNILVNNAGIVIY-KEAKDYTVEDY  110 (259)
T ss_dssp             HHHHHHTTTCCCEEEECCCCCCC-CCGGGCCHHHH
T ss_pred             HHHHHHhCCCceEEEECCceecc-CccccCCHHHH
Confidence            99999987 79999999999776 78888887664

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=8.6e-23  Score=148.16  Aligned_cols=108  Identities=23%  Similarity=0.259  Sum_probs=92.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..++||++|||||++|||+++|++|++.|++|++++|+   ...+++..+++....  ...++.++.||+++++++++++
T Consensus         6 ~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~---~~~l~~~~~~l~~~~--~~~~~~~~~~Dls~~~~v~~~v   80 (257)
T d1xg5a_           6 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCART---VGNIEELAAECKSAG--YPGTLIPYRCDLSNEEDILSMF   80 (257)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHTT--CSSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHhcC--CCceEEEEEccCCCHHHHHHHH
Confidence            35899999999999999999999999999999999997   556666667666521  1246788899999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      +++.+++|+||+||||||.... .++.+++.++|
T Consensus        81 ~~~~~~~g~iD~lVnnAg~~~~-~~~~~~~~~~~  113 (257)
T d1xg5a_          81 SAIRSQHSGVDICINNAGLARP-DTLLSGSTSGW  113 (257)
T ss_dssp             HHHHHHHCCCSEEEECCCCCCC-CCTTTCCHHHH
T ss_pred             HHHHHhcCCCCEEEecccccCC-CccccccHHHH
Confidence            9999999999999999999876 78888877654

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=9.7e-23  Score=147.74  Aligned_cols=104  Identities=24%  Similarity=0.436  Sum_probs=90.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .++||++|||||++|||+++|++|++.|++|++++|+   .+.+++..+++..    .+.++.++.+|++++++++++++
T Consensus         8 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~---~~~~~~~~~~l~~----~g~~~~~~~~Dvs~~~~~~~~~~   80 (255)
T d1fmca_           8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN---ADAANHVVDEIQQ----LGGQAFACRCDITSEQELSALAD   80 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESC---HHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHH----cCCcEEEEEccCCCHHHHHHHHH
Confidence            5899999999999999999999999999999999996   5566677777766    56678899999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++.+++|++|+||||||+... .++ +++.++|
T Consensus        81 ~~~~~~g~iDilvnnAG~~~~-~~~-e~~~e~~  111 (255)
T d1fmca_          81 FAISKLGKVDILVNNAGGGGP-KPF-DMPMADF  111 (255)
T ss_dssp             HHHHHHSSCCEEEECCCCCCC-CCT-TCCHHHH
T ss_pred             HHHHHcCCCCEeeeCCcCCCC-Ccc-cCCHHHH
Confidence            999999999999999998765 455 6666554

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.88  E-value=1.1e-22  Score=147.74  Aligned_cols=108  Identities=22%  Similarity=0.334  Sum_probs=90.1

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHH
Q 044851           34 PSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKR  113 (149)
Q Consensus        34 ~~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  113 (149)
                      +.+.++||++|||||++|||+++|++|++.|++|++++|+   .+.+++..+++..    .+.++.++.||+++++++++
T Consensus         2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~---~~~l~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~   74 (259)
T d1xq1a_           2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN---EYELNECLSKWQK----KGFQVTGSVCDASLRPEREK   74 (259)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCCEEEEECCTTSHHHHHH
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHh----cCCceEEEeccCCCHHHHHH
Confidence            3567899999999999999999999999999999999997   5566677777766    56678899999999999999


Q ss_pred             HHHHHHHhc-CCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          114 VVDEVVNAY-DRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       114 ~~~~~~~~~-g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      +++++.+++ |++|+||||||+... .++.+++.++|
T Consensus        75 ~~~~~~~~~~g~idilvnnAG~~~~-~~~~~~~~~~~  110 (259)
T d1xq1a_          75 LMQTVSSMFGGKLDILINNLGAIRS-KPTLDYTAEDF  110 (259)
T ss_dssp             HHHHHHHHHTTCCSEEEEECCC-------CCCCHHHH
T ss_pred             HHHHHHHHhCCCcccccccccccCC-CchhhCCHHHH
Confidence            999999998 689999999999876 78888887654

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.88  E-value=6.2e-23  Score=149.08  Aligned_cols=106  Identities=32%  Similarity=0.434  Sum_probs=89.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      |+||++|||||++|||+++|++|++.|++|++++|+.  ...+++..+++...   .+.++.++.+|+++++++++++++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~--~~~~~~~~~~~~~~---~g~~~~~~~~Dv~~~~~v~~~~~~   76 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGD--AAEIEKVRAGLAAQ---HGVKVLYDGADLSKGEAVRGLVDN   76 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSC--HHHHHHHHHHHHHH---HTSCEEEECCCTTSHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCc--HHHHHHHHHHHHHh---cCCcEEEEECCCCCHHHHHHHHHH
Confidence            6899999999999999999999999999999999963  33444444444331   356788899999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      +.+++|++|+||||||+... +++.+++.++|
T Consensus        77 ~~~~~G~iDiLVnnAG~~~~-~~~~~~~~~~~  107 (260)
T d1x1ta1          77 AVRQMGRIDILVNNAGIQHT-ALIEDFPTEKW  107 (260)
T ss_dssp             HHHHHSCCSEEEECCCCCCC-CCGGGCCHHHH
T ss_pred             HHHHhCCCcEEEeecccccC-CchhhhhHHhh
Confidence            99999999999999999876 78888887654

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.88  E-value=1.5e-22  Score=146.65  Aligned_cols=102  Identities=25%  Similarity=0.377  Sum_probs=90.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      .|++|||||++|||+++|++|++.|++|++++|+   .+.+++..+++..    .+.++.++.||++++++++++++++.
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~---~~~l~~~~~~i~~----~g~~~~~~~~Dv~~~~~v~~~~~~~~   73 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYN---DATAKAVASEINQ----AGGHAVAVKVDVSDRDQVFAAVEQAR   73 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHh----cCCcEEEEEeeCCCHHHHHHHHHHHH
Confidence            3678999999999999999999999999999997   5566667777766    56678899999999999999999999


Q ss_pred             HhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          120 NAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      +++|++|+||||||+... .++.+++.++|
T Consensus        74 ~~~g~iDilVnnAG~~~~-~~~~~~~~~~~  102 (255)
T d1gega_          74 KTLGGFDVIVNNAGVAPS-TPIESITPEIV  102 (255)
T ss_dssp             HHTTCCCEEEECCCCCCC-BCGGGCCHHHH
T ss_pred             HHhCCccEEEeccccccc-CcHHHhhhhhh
Confidence            999999999999999765 78888887764

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.88  E-value=1.9e-22  Score=145.59  Aligned_cols=103  Identities=28%  Similarity=0.486  Sum_probs=88.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +|+||++||||+++|||+++|+.|++.|++|++++|+..  ++....   +..    .+.++.++.+|++|+++++++++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~--~~~~~~---~~~----~g~~~~~~~~Dvs~~~~v~~~~~   72 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAA---IRN----LGRRVLTVKCDVSQPGDVEAFGK   72 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHH---HHH----TTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCch--HHHHHH---HHH----cCCcEEEEEeeCCCHHHHHHHHH
Confidence            589999999999999999999999999999999999743  223222   333    46678899999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++.+++|++|+||||||+... .++.+++.++|
T Consensus        73 ~~~~~~G~iDilVnnAG~~~~-~~~~~~~~e~~  104 (247)
T d2ew8a1          73 QVISTFGRCDILVNNAGIYPL-IPFDELTFEQW  104 (247)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC-CCGGGCCHHHH
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CChHhCCHHHh
Confidence            999999999999999999765 78888887764

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.87  E-value=1.2e-22  Score=147.59  Aligned_cols=106  Identities=20%  Similarity=0.292  Sum_probs=89.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .++||++|||||++|||+++|++|++.|++|++++|+.....+   ..+++.+.   .+.++.++.||++++++++++++
T Consensus         6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~---~~~~~~~~---~g~~~~~~~~Dv~~~~~v~~~~~   79 (260)
T d1h5qa_           6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVE---VTEKVGKE---FGVKTKAYQCDVSNTDIVTKTIQ   79 (260)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHH---HHHHHHHH---HTCCEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH---HHHHHHHH---hCCceEEEEccCCCHHHHHHHHH
Confidence            5899999999999999999999999999999999998554433   33334321   35678889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++.+++|++|+||||||+... .++.+++.++|
T Consensus        80 ~~~~~~g~iDilVnnAg~~~~-~~~~~~~~~~~  111 (260)
T d1h5qa_          80 QIDADLGPISGLIANAGVSVV-KPATELTHEDF  111 (260)
T ss_dssp             HHHHHSCSEEEEEECCCCCCC-SCGGGCCHHHH
T ss_pred             HHHHHhCCCcEeccccccccc-CCHHHhccccc
Confidence            999999999999999999766 78888887654

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.4e-22  Score=144.01  Aligned_cols=104  Identities=21%  Similarity=0.282  Sum_probs=90.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..+.||++|||||++|||+++|++|++.|++|++++|+   .+.+++..+++..    .+.+++.+.||++|.+++++++
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~---~~~l~~~~~~~~~----~~~~~~~~~~Dvs~~~~v~~~~   75 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDIN---KHGLEETAAKCKG----LGAKVHTFVVDCSNREDIYSSA   75 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHh----cCCcEEEEEeeCCCHHHHHHHH
Confidence            35899999999999999999999999999999999997   5566667777765    5678899999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDES  147 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~  147 (149)
                      +++.+++|++|+||||||+... ..+.+.+.+
T Consensus        76 ~~i~~~~g~idilinnag~~~~-~~~~~~~~~  106 (244)
T d1yb1a_          76 KKVKAEIGDVSILVNNAGVVYT-SDLFATQDP  106 (244)
T ss_dssp             HHHHHHTCCCSEEEECCCCCCC-CCCGGGHHH
T ss_pred             HHHHHHcCCCceeEeecccccc-ccccccchh
Confidence            9999999999999999999876 566655433

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=6.4e-22  Score=146.26  Aligned_cols=110  Identities=25%  Similarity=0.439  Sum_probs=93.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccC-CCCCCceEEEecCCChHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKT-PDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      ..|+||++|||||++|||+++|++|++.|++|++++|+   .+.+.+..+++..... ..+.++.++.||++++++++++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~---~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~   84 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRK---LERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNL   84 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHH
Confidence            46899999999999999999999999999999999997   5556666666654322 1356788899999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++++.+.+|++|+||||||+... .++.+++.++|
T Consensus        85 ~~~~~~~~G~iDiLVnnAg~~~~-~~~~~~~~e~~  118 (297)
T d1yxma1          85 VKSTLDTFGKINFLVNNGGGQFL-SPAEHISSKGW  118 (297)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCC-CCGGGCCHHHH
T ss_pred             HHHHHHHhCCeEEEEeecccccc-Cchhhhhhhhh
Confidence            99999999999999999999776 78888877654

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.87  E-value=3.6e-22  Score=143.72  Aligned_cols=100  Identities=24%  Similarity=0.315  Sum_probs=85.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .++||++|||||++|||+++|++|++.|++|++++|+   .+.+++..+         ....+++.||++++++++++++
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~---~~~l~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~   69 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIE---EGPLREAAE---------AVGAHPVVMDVADPASVERGFA   69 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHH---------TTTCEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHH---------HcCCeEEEEecCCHHHHHHHHH
Confidence            4789999999999999999999999999999999997   344443332         1235788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++.+++|++|+||||||+... .++.+++.++|
T Consensus        70 ~~~~~~g~iDilVnnAG~~~~-~~~~~~~~~~~  101 (242)
T d1ulsa_          70 EALAHLGRLDGVVHYAGITRD-NFHWKMPLEDW  101 (242)
T ss_dssp             HHHHHHSSCCEEEECCCCCCC-CCGGGCCHHHH
T ss_pred             HHHHhcCCceEEEECCccccc-CchhhCcchhh
Confidence            999999999999999999876 78888887664

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.87  E-value=4.2e-22  Score=143.54  Aligned_cols=102  Identities=32%  Similarity=0.475  Sum_probs=88.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +|+||++||||+++|||+++|+.|++.|++|++++|+   .+++++..+++       +....++.+|++++++++++++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~   72 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDIL---DEEGKAMAAEL-------ADAARYVHLDVTQPAQWKAAVD   72 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHT-------GGGEEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHh-------hCcceEEEeecCCHHHHHHHHH
Confidence            5899999999999999999999999999999999997   44555555443       2356788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++.+++|++|+||||||+... .++.+++.++|
T Consensus        73 ~~~~~~g~idilinnAG~~~~-~~~~~~~~~~~  104 (244)
T d1nffa_          73 TAVTAFGGLHVLVNNAGILNI-GTIEDYALTEW  104 (244)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC-BCTTTSCHHHH
T ss_pred             HHHHHhCCCeEEEECCcccCC-CchhhCCHHHH
Confidence            999999999999999999776 78888887664

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.9e-22  Score=144.17  Aligned_cols=103  Identities=24%  Similarity=0.419  Sum_probs=86.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ++++||++||||+++|||+++|+.|++.|++|++++|+   .+.+++..++        .....++.||+++++++++++
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~---~~~~~~~~~~--------~~~~~~~~~Dvs~~~~v~~~~   70 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD---ESGGRALEQE--------LPGAVFILCDVTQEDDVKTLV   70 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHH--------CTTEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHh--------cCCCeEEEccCCCHHHHHHHH
Confidence            46899999999999999999999999999999999996   3334333322        234678999999999999999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      +++.+++|++|+||||||+.....++.+++.++|
T Consensus        71 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~  104 (250)
T d1ydea1          71 SETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGF  104 (250)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHH
T ss_pred             HHHHHhcCCCCEEEecccccccccccccccHHHH
Confidence            9999999999999999998765467778876654

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.87  E-value=3.2e-22  Score=145.03  Aligned_cols=102  Identities=33%  Similarity=0.479  Sum_probs=88.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +++||++|||||++|||+++|+.|++.|++|++++|+   .+.+++..+++       +.++.++.+|++++++++++++
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~---~~~l~~~~~~~-------~~~~~~~~~Dvt~~~~v~~~~~   71 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADIN---LEAARATAAEI-------GPAACAIALDVTDQASIDRCVA   71 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESC---HHHHHHHHHHH-------CTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHh-------CCceEEEEeeCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999997   44555555443       3467889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++.+++|++|+||||||+... +++.+++.++|
T Consensus        72 ~~~~~~g~iDilVnnAg~~~~-~~~~~~~~~~~  103 (256)
T d1k2wa_          72 ELLDRWGSIDILVNNAALFDL-APIVEITRESY  103 (256)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC-CCGGGCCHHHH
T ss_pred             HHHHHhCCccEEEeecccccc-cccccCCHHHH
Confidence            999999999999999999776 78888887654

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.87  E-value=3.5e-22  Score=144.71  Aligned_cols=102  Identities=25%  Similarity=0.328  Sum_probs=87.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .|+||++|||||++|||+++|++|++.|++|++++|+   .+++.+..++       .+.++.++.+|++++++++++++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~---~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~   71 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVL---DEEGAATARE-------LGDAARYQHLDVTIEEDWQRVVA   71 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHT-------TGGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHH-------hCCceEEEEcccCCHHHHHHHHH
Confidence            4799999999999999999999999999999999997   4444444433       33457889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++.+++|++|+||||||+... .++.+.+.++|
T Consensus        72 ~~~~~~g~iDilVnnAg~~~~-~~~~~~~~~~~  103 (254)
T d1hdca_          72 YAREEFGSVDGLVNNAGISTG-MFLETESVERF  103 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC-SCGGGSCHHHH
T ss_pred             HHHHHcCCccEEEecCccccc-ccccccccccc
Confidence            999999999999999999776 78888877654

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.86  E-value=8.8e-22  Score=143.47  Aligned_cols=105  Identities=22%  Similarity=0.383  Sum_probs=88.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +|+||++|||||++|||+++|++|++.|++|++++|+   .+.+++..+++..     ...+.++.||++++++++++++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~---~~~~~~~~~~l~~-----~~~~~~~~~Dv~~~~~v~~~~~   74 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIA---DDHGQKVCNNIGS-----PDVISFVHCDVTKDEDVRNLVD   74 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCC-----TTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHhcC-----CCceEEEEccCCCHHHHHHHHH
Confidence            6899999999999999999999999999999999997   4556666666542     3456788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCC-CCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYEC-GSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~-~~~~~~s~~~~  149 (149)
                      ++.+++|++|+||||||+.... ..+.+++.++|
T Consensus        75 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~  108 (268)
T d2bgka1          75 TTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDF  108 (268)
T ss_dssp             HHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHH
T ss_pred             HHHHHcCCcceeccccccccCCCcccccCcHHHH
Confidence            9999999999999999987652 24666665543

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.86  E-value=2.3e-21  Score=140.65  Aligned_cols=106  Identities=31%  Similarity=0.426  Sum_probs=92.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +.++||++||||+++|||+++|++|++.|++|++++|+   .+.+++..+++..    .+..++++.+|+++.+++++++
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~---~~~l~~~~~~~~~----~~~~~~~~~~D~s~~~~~~~~~   74 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRN---EKELDECLEIWRE----KGLNVEGSVCDLLSRTERDKLM   74 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHh----cCCCceEEEeecCCHHHHHHHH
Confidence            56899999999999999999999999999999999997   4556666666766    5667888999999999999999


Q ss_pred             HHHHHhc-CCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAY-DRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       116 ~~~~~~~-g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      +++.+.+ +.+|+||||||.... .++.+++.++|
T Consensus        75 ~~~~~~~~g~idilinnag~~~~-~~~~~~~~~~~  108 (258)
T d1ae1a_          75 QTVAHVFDGKLNILVNNAGVVIH-KEAKDFTEKDY  108 (258)
T ss_dssp             HHHHHHTTSCCCEEEECCCCCCC-CCTTTCCHHHH
T ss_pred             HHHHHHhCCCcEEEecccccccc-CccccCCHHHH
Confidence            9999998 589999999999876 78888877654

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=9.5e-22  Score=141.53  Aligned_cols=101  Identities=26%  Similarity=0.413  Sum_probs=87.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      ++||++|||||++|||+++|+.|++.|++|++++|+   .+.+++..+++.       .+...+.+|+++++++++++++
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~---~~~l~~~~~~~~-------~~~~~~~~Dv~~~~~v~~~~~~   71 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATS---ENGAQAISDYLG-------ANGKGLMLNVTDPASIESVLEK   71 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHHG-------GGEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHHhC-------CCCcEEEEEecCHHHhhhhhhh
Confidence            789999999999999999999999999999999997   444555554443       2457889999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      +.+++|++|+||||||.... +++.+++.++|
T Consensus        72 ~~~~~g~iDilVnnAg~~~~-~~~~~~~~~~~  102 (243)
T d1q7ba_          72 IRAEFGEVDILVNNAGITRD-NLLMRMKDEEW  102 (243)
T ss_dssp             HHHHTCSCSEEEECCCCCCC-CCGGGCCHHHH
T ss_pred             hhcccCCcceehhhhhhccc-ccccccccccc
Confidence            99999999999999999776 78888887654

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.86  E-value=1.1e-21  Score=142.30  Aligned_cols=105  Identities=26%  Similarity=0.402  Sum_probs=91.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +++||++|||||++|||+++|+.|++.|++|++++++  ....+++..+++..    .+.+++++.||++++++++.+++
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~--~~~~~~~~~~~~~~----~g~~~~~~~~D~~~~~~v~~~~~   76 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGS--SSKAAEEVVAELKK----LGAQGVAIQADISKPSEVVALFD   76 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHH----TTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCC--ChHHHHHHHHHHHH----cCCCceEecCCCCCHHHHHHHHH
Confidence            5899999999999999999999999999999988775  24455666666666    67788999999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+++|.||+||||||.... .++.+.+.++
T Consensus        77 ~~~~~~g~idilinnag~~~~-~~~~~~~~~~  107 (259)
T d1ja9a_          77 KAVSHFGGLDFVMSNSGMEVW-CDELEVTQEL  107 (259)
T ss_dssp             HHHHHHSCEEEEECCCCCCCC-CCGGGCCHHH
T ss_pred             HHHHHcCCCcEEEeccccccc-cccccchHHH
Confidence            999999999999999999765 6787777654

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.86  E-value=1.1e-21  Score=141.07  Aligned_cols=102  Identities=25%  Similarity=0.329  Sum_probs=84.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .++||++|||||++|||+++|+.|++.|++|++++|+   .+++.+..+   +    .+.++.++++|++++++++++++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~---~----~~~~~~~~~~Dls~~~~i~~~~~   71 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDRE---ERLLAEAVA---A----LEAEAIAVVADVSDPKAVEAVFA   71 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHH---T----CCSSEEEEECCTTSHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHH---H----cCCceEEEEecCCCHHHHHHHHH
Confidence            4799999999999999999999999999999999997   444433332   2    45678889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++.+.+|++|+||||||.... .++.+++.++|
T Consensus        72 ~i~~~~g~iDiLinnAg~~~~-~~~~~~~~~~~  103 (241)
T d2a4ka1          72 EALEEFGRLHGVAHFAGVAHS-ALSWNLPLEAW  103 (241)
T ss_dssp             HHHHHHSCCCEEEEGGGGTTT-TC----CHHHH
T ss_pred             HHHHHhCCccEeccccccccc-cchhhhhcccc
Confidence            999999999999999999765 78888877654

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.86  E-value=1.1e-21  Score=142.62  Aligned_cols=97  Identities=30%  Similarity=0.462  Sum_probs=80.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +|+||++|||||++|||+++|++|++.|++|++++|+   .+.+++..+++..... ...++.++.+|++++++++++++
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~---~~~l~~~~~~l~~~~~-~~~~~~~~~~Dvt~~~~v~~~~~   77 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRH---AERLEETRQQILAAGV-SEQNVNSVVADVTTDAGQDEILS   77 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHTTC-CGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHhcCC-CcCceEEEEccCCCHHHHHHHHH
Confidence            5899999999999999999999999999999999997   5556666666654211 23457889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~  137 (149)
                      ++.+++|++|+||||||+..+
T Consensus        78 ~~~~~~g~iDilvnnAG~~~~   98 (264)
T d1spxa_          78 TTLGKFGKLDILVNNAGAAIP   98 (264)
T ss_dssp             HHHHHHSCCCEEEECCC----
T ss_pred             HHHHHhCCCCEeecccccccC
Confidence            999999999999999998653

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.85  E-value=1.2e-21  Score=141.38  Aligned_cols=99  Identities=38%  Similarity=0.528  Sum_probs=84.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .|+||++||||+++|||+++|+.|++.|++|++++|+...    .+..+++         ...++++|+++.++++++++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~----~~~~~~~---------~~~~~~~Dv~~~~~v~~~~~   68 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG----KEVAEAI---------GGAFFQVDLEDERERVRFVE   68 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH----HHHHHHH---------TCEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH----HHHHHHc---------CCeEEEEeCCCHHHHHHHHH
Confidence            3789999999999999999999999999999999997432    2222222         23578999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++.+++|+||+||||||+..+ .++.+++.++|
T Consensus        69 ~~~~~~G~iDiLVnnAG~~~~-~~~~~~~~e~~  100 (248)
T d2d1ya1          69 EAAYALGRVDVLVNNAAIAAP-GSALTVRLPEW  100 (248)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC-BCTTTCCHHHH
T ss_pred             HHHHhcCCCCeEEEeCcCCCC-CChhhCCHHHH
Confidence            999999999999999999876 78888887764

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.85  E-value=1.2e-21  Score=141.79  Aligned_cols=102  Identities=30%  Similarity=0.458  Sum_probs=88.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +|+||++|||||++|||+++|++|++.|++|++++|+   .+.+++..+++       +.+..++.+|+++.++++++++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~---~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~~~~~~~   72 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN---EAAGQQLAAEL-------GERSMFVRHDVSSEADWTLVMA   72 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSC---HHHHHHHHHHH-------CTTEEEECCCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHh-------CCCeEEEEeecCCHHHHHHHHH
Confidence            5899999999999999999999999999999999986   44454544443       3456788999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++.+++|++|+||||||+... .++.+++.++|
T Consensus        73 ~~~~~~g~iDilVnnAG~~~~-~~~~~~~~~~~  104 (253)
T d1hxha_          73 AVQRRLGTLNVLVNNAGILLP-GDMETGRLEDF  104 (253)
T ss_dssp             HHHHHHCSCCEEEECCCCCCC-BCTTTCCHHHH
T ss_pred             HHHHHhCCCCeEEecccccCC-CCcccCCHHHH
Confidence            999999999999999999776 68888887664

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.85  E-value=5.7e-21  Score=140.55  Aligned_cols=110  Identities=25%  Similarity=0.392  Sum_probs=92.1

Q ss_pred             CCCCCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChH
Q 044851           30 PDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDE  109 (149)
Q Consensus        30 ~~~~~~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~  109 (149)
                      ...+|.+.++||++|||||++|||+++|++|++.|++|++++|+   ..++.+..+++...   .+..+.++.+|+++.+
T Consensus        15 ~~~~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~---~~~l~~~~~~l~~~---~g~~~~~~~~D~~~~~   88 (294)
T d1w6ua_          15 KAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRK---MDVLKATAEQISSQ---TGNKVHAIQCDVRDPD   88 (294)
T ss_dssp             SCCSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHH---HSSCEEEEECCTTCHH
T ss_pred             ccCCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC---HHHHHHHHHHHHHh---cCCceEEEEecccChH
Confidence            34566678999999999999999999999999999999999997   45555556555432   4566788999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCC
Q 044851          110 NCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDE  146 (149)
Q Consensus       110 ~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~  146 (149)
                      ++++++..+.++++++|+||||||.... ..+.+.+.
T Consensus        89 ~v~~~~~~~~~~~g~iDilvnnAg~~~~-~~~~~~~~  124 (294)
T d1w6ua_          89 MVQNTVSELIKVAGHPNIVINNAAGNFI-SPTERLSP  124 (294)
T ss_dssp             HHHHHHHHHHHHTCSCSEEEECCCCCCC-SCGGGCCH
T ss_pred             HHHHHhhhhhhhccccchhhhhhhhccc-cccccchh
Confidence            9999999999999999999999998765 55655543

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.85  E-value=7.1e-21  Score=138.91  Aligned_cols=101  Identities=26%  Similarity=0.464  Sum_probs=85.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .|+||++|||||++|||+++|++|++.|++|++++|+   .+.+++..+++.+... ...++.++.||++++++++++++
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~---~~~l~~~~~~l~~~~~-~~~~~~~~~~Dvs~~~~v~~~~~   77 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRS---SERLEETRQIILKSGV-SEKQVNSVVADVTTEDGQDQIIN   77 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHTTTC-CGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHhcCC-CCCceEEEEccCCCHHHHHHHHH
Confidence            4899999999999999999999999999999999997   4556666666654211 23457889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVE  142 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~  142 (149)
                      ++.+++|++|+||||||+..+ .++.
T Consensus        78 ~~~~~~g~iDilvnnAG~~~~-~~~~  102 (272)
T d1xkqa_          78 STLKQFGKIDVLVNNAGAAIP-DAFG  102 (272)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC-CTTC
T ss_pred             HHHHHhCCceEEEeCCcccCc-cccc
Confidence            999999999999999999765 4443

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.85  E-value=3.5e-21  Score=140.71  Aligned_cols=108  Identities=28%  Similarity=0.399  Sum_probs=87.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +|+||++|||||++|||+++|++|++.|++|++++|+   .+.+++..+++.+... ...++.++.+|++++++++++++
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~---~~~l~~~~~~i~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~   76 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRN---EDRLEETKQQILKAGV-PAEKINAVVADVTEASGQDDIIN   76 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHTTC-CGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHHcCC-CCcceEEEEeeCCCHHHHHHHHH
Confidence            3789999999999999999999999999999999997   4556666666654211 22357889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCC-CCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYEC-GSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~-~~~~~~s~~~  148 (149)
                      ++.+++|++|+||||||..... ....+.+.++
T Consensus        77 ~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~  109 (274)
T d1xhla_          77 TTLAKFGKIDILVNNAGANLADGTANTDQPVEL  109 (274)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHH
T ss_pred             HHHHHcCCceEEEeecccccccccccccCCHHH
Confidence            9999999999999999986542 2344444443

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=3e-21  Score=141.00  Aligned_cols=97  Identities=25%  Similarity=0.323  Sum_probs=83.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc-CCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQE-GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +++|||||++|||+++|++|++. |++|++++|+   .+++++..+++..    .+.++.++.||++|.++++++++++.
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~---~~~~~~~~~~l~~----~~~~~~~~~~Dvs~~~sv~~~~~~~~   76 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARD---VTRGQAAVQQLQA----EGLSPRFHQLDIDDLQSIRALRDFLR   76 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESS---HHHHHHHHHHHHH----TTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECC---HHHHHHHHHHHHh----cCCcEEEEEEecCCHHHHHHHHHHHH
Confidence            46799999999999999999986 8999999997   5566777777776    56678899999999999999999999


Q ss_pred             HhcCCccEEEeCCcCCCCCCCCCCCC
Q 044851          120 NAYDRIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~~~~~~~~s  145 (149)
                      +++|+||+||||||+... ....+.+
T Consensus        77 ~~~g~iDiLVnNAGi~~~-~~~~~~~  101 (275)
T d1wmaa1          77 KEYGGLDVLVNNAGIAFK-VADPTPF  101 (275)
T ss_dssp             HHHSSEEEEEECCCCCCC-TTCCSCH
T ss_pred             HhcCCcEEEEEcCCcCCC-CCcccCC
Confidence            999999999999999765 4555543

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.85  E-value=2.4e-21  Score=138.93  Aligned_cols=94  Identities=24%  Similarity=0.364  Sum_probs=80.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +|+||++|||||++|||+++|++|++.|++|++++|+..                  ....+..+.+|++++++++++++
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~------------------~~~~~~~~~~Dv~~~~~v~~~~~   65 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG------------------APKGLFGVEVDVTDSDAVDRAFT   65 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSC------------------CCTTSEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc------------------hhcCceEEEEecCCHHHHHHHHH
Confidence            589999999999999999999999999999999999742                  23456789999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++.+++|++|+||||||+... .++.+.+.++|
T Consensus        66 ~~~~~~g~iDiLVnnAG~~~~-~~~~~~~~e~~   97 (237)
T d1uzma1          66 AVEEHQGPVEVLVSNAGLSAD-AFLMRMTEEKF   97 (237)
T ss_dssp             HHHHHHSSCSEEEEECSCCC------CCCHHHH
T ss_pred             HHHHhcCCceEEEeeeccccc-ccHhhCCHHHH
Confidence            999999999999999999776 78888887664

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.85  E-value=4e-21  Score=138.03  Aligned_cols=101  Identities=28%  Similarity=0.414  Sum_probs=88.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCc-------EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGAT-------VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKR  113 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~-------Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  113 (149)
                      +++|||||++|||+++|++|++.|++       |++++|+   .+++++..+++..    .+.++.++.||++|++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~---~~~l~~~~~~~~~----~g~~~~~~~~Dvt~~~~v~~   74 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRT---AADLEKISLECRA----EGALTDTITADISDMADVRR   74 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESC---HHHHHHHHHHHHT----TTCEEEEEECCTTSHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCC---HHHHHHHHHHHHh----cCCcEEEEEecCCCHHHHHH
Confidence            46899999999999999999999998       8888886   5556666666665    56678889999999999999


Q ss_pred             HHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          114 VVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       114 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      +++++.+++|++|+||||||+... .++.+++.++|
T Consensus        75 ~~~~~~~~~g~iDilvnnAg~~~~-~~~~~~~~~~~  109 (240)
T d2bd0a1          75 LTTHIVERYGHIDCLVNNAGVGRF-GALSDLTEEDF  109 (240)
T ss_dssp             HHHHHHHHTSCCSEEEECCCCCCC-CCGGGCCHHHH
T ss_pred             HHHHHHHHcCCcceeecccccccC-CccccCCHHHH
Confidence            999999999999999999999876 78988887764

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.84  E-value=3.7e-21  Score=138.50  Aligned_cols=102  Identities=23%  Similarity=0.432  Sum_probs=87.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      +++|||||++|||+++|++|++.|++|++.+++  ..+.+++..+++..    .+.++.++.+|++++++++++++++.+
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~--~~~~~~~~~~~~~~----~g~~~~~~~~Dv~~~~~v~~~~~~~~~   75 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYAR--SAKAAEEVSKQIEA----YGGQAITFGGDVSKEADVEAMMKTAID   75 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHH----HTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC--CHHHHHHHHHHHHH----cCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            479999999999999999999999999988764  24445555566655    456788899999999999999999999


Q ss_pred             hcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          121 AYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       121 ~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++|++|+||||||.... .++.+++.++|
T Consensus        76 ~~g~iDiLVnnAg~~~~-~~~~~~~~~~~  103 (244)
T d1edoa_          76 AWGTIDVVVNNAGITRD-TLLIRMKKSQW  103 (244)
T ss_dssp             HSSCCSEEEECCCCCCC-CCGGGCCHHHH
T ss_pred             HcCCCCccccccccccc-cchhccchHHH
Confidence            99999999999999876 78888887664

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.84  E-value=6.6e-21  Score=139.00  Aligned_cols=105  Identities=29%  Similarity=0.540  Sum_probs=90.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .++||++|||||++|||+++|+.|++.|++|++++++  ..+.+++..+++..    .+.++.++.+|+++++++.++++
T Consensus        15 sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~--~~~~~~~~~~~~~~----~g~~~~~~~~D~~~~~~v~~~~~   88 (272)
T d1g0oa_          15 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYAN--STESAEEVVAAIKK----NGSDAACVKANVGVVEDIVRMFE   88 (272)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC--chHHHHHHHHHHHh----hCCceeeEeCCCCCHHHHHHHHH
Confidence            5899999999999999999999999999999999986  24445556666665    66788899999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      ++.+.+|++|++|||+|.... .++.+.+.++
T Consensus        89 ~~~~~~g~idilV~nag~~~~-~~~~~~~~~~  119 (272)
T d1g0oa_          89 EAVKIFGKLDIVCSNSGVVSF-GHVKDVTPEE  119 (272)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC-CCGGGCCHHH
T ss_pred             HHHHHhCCCCccccccccchh-hhhhhhhhhH
Confidence            999999999999999998765 6777776554

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.82  E-value=4.7e-20  Score=136.42  Aligned_cols=105  Identities=29%  Similarity=0.431  Sum_probs=88.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC------ChHHHHHHHHHHHhccCCCCCCceEEEecCCChHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ------EDKDAKETLEMLREAKTPDAKDPMAISADLGFDEN  110 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~  110 (149)
                      .++||++||||+++|||+++|++|++.|++|++.+++..      ....+.+..+++..       ......+|+.+.++
T Consensus         4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~d~~~~~~   76 (302)
T d1gz6a_           4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR-------RGGKAVANYDSVEA   76 (302)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH-------TTCEEEEECCCGGG
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh-------cccccccccchHHH
Confidence            589999999999999999999999999999999987642      23345555555543       23456789999999


Q ss_pred             HHHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          111 CKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       111 v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++++++++.+++|+||+||||||+... +++.+++.++|
T Consensus        77 ~~~~v~~~~~~~G~iDiLVnNAGi~~~-~~~~~~~~e~~  114 (302)
T d1gz6a_          77 GEKLVKTALDTFGRIDVVVNNAGILRD-RSFSRISDEDW  114 (302)
T ss_dssp             HHHHHHHHHHHTSCCCEEEECCCCCCC-CCGGGCCHHHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCccCCC-CChhhCCHHHH
Confidence            999999999999999999999999876 78999887764

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=8.5e-20  Score=131.94  Aligned_cols=94  Identities=33%  Similarity=0.469  Sum_probs=80.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .||++|||||++|||+++|++|++.|++|++++|+   .+.+.+..+++.+..  .+.++.++.||++++++++++++++
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~---~~~~~~~~~~l~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~   76 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWN---LEAGVQCKAALHEQF--EPQKTLFIQCDVADQQQLRDTFRKV   76 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHTTTS--CGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHHhc--CCCcEEEEEeecCCHHHHHHHHHHH
Confidence            68999999999999999999999999999999997   445555555554311  2446788999999999999999999


Q ss_pred             HHhcCCccEEEeCCcCCCC
Q 044851          119 VNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~~  137 (149)
                      .+++|++|+||||||+...
T Consensus        77 ~~~~G~iDilVnnAg~~~~   95 (254)
T d2gdza1          77 VDHFGRLDILVNNAGVNNE   95 (254)
T ss_dssp             HHHHSCCCEEEECCCCCCS
T ss_pred             HHHcCCcCeeccccccccc
Confidence            9999999999999998654

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=3e-20  Score=133.53  Aligned_cols=97  Identities=25%  Similarity=0.343  Sum_probs=79.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .|+||++||||+++|||+++|++|++.|++|++++|+   .+++.+..+++        ..+..+.+|+++++++++++ 
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~---~~~l~~~~~~~--------~~~~~~~~Dv~~~~~v~~~~-   69 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT---NSDLVSLAKEC--------PGIEPVCVDLGDWDATEKAL-   69 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHS--------TTCEEEECCTTCHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHhc--------CCCeEEEEeCCCHHHHHHHH-
Confidence            3789999999999999999999999999999999997   44444443322        24678899999999877655 


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                         +++|++|+||||||+... +++.+++.++|
T Consensus        70 ---~~~g~iDilVnnAg~~~~-~~~~~~~~~~~   98 (242)
T d1cyda_          70 ---GGIGPVDLLVNNAALVIM-QPFLEVTKEAF   98 (242)
T ss_dssp             ---TTCCCCSEEEECCCCCCC-BCGGGCCHHHH
T ss_pred             ---HHcCCCeEEEECCccccc-hhHHHHHHHHH
Confidence               567999999999999776 78888887654

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=4e-20  Score=133.03  Aligned_cols=97  Identities=27%  Similarity=0.341  Sum_probs=79.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .++||++||||+++|||+++|++|++.|++|++++|+   .+++++..+++        ..+..+.+|++|.+++++++ 
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~---~~~l~~~~~~~--------~~~~~~~~Dv~d~~~v~~~~-   71 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRT---QADLDSLVREC--------PGIEPVCVDLGDWEATERAL-   71 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHS--------TTCEEEECCTTCHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC---HHHHHHHHHhc--------CCCeEEEEeCCCHHHHHHHH-
Confidence            4899999999999999999999999999999999997   44444443322        24678889999999877655 


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                         +++|++|+||||||+... +++.+++.++|
T Consensus        72 ---~~~g~iDilVnnAg~~~~-~~~~~~~~~~~  100 (244)
T d1pr9a_          72 ---GSVGPVDLLVNNAAVALL-QPFLEVTKEAF  100 (244)
T ss_dssp             ---TTCCCCCEEEECCCCCCC-BCGGGCCHHHH
T ss_pred             ---HHhCCceEEEeccccccc-cchhhhhHHHH
Confidence               567999999999999776 78888887654

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.81  E-value=1.8e-19  Score=131.69  Aligned_cols=96  Identities=30%  Similarity=0.392  Sum_probs=81.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +++||++|||||++|||+++|+.|++.|++|++++|+   .+.+.+..+++       +.++..+.+|+++.++++++++
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~---~~~l~~~~~~~-------~~~~~~~~~Dv~~~~~~~~~~~   71 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKS---AERLAELETDH-------GDNVLGIVGDVRSLEDQKQAAS   71 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHH-------GGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHc-------CCCeeEEecccccHHHHHHHHH
Confidence            4789999999999999999999999999999999997   44444444433       3457889999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVE  142 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~  142 (149)
                      ++.+++|++|+||||||+......+.
T Consensus        72 ~~~~~~g~idilvnnAG~~~~~~~~~   97 (276)
T d1bdba_          72 RCVARFGKIDTLIPNAGIWDYSTALV   97 (276)
T ss_dssp             HHHHHHSCCCEEECCCCCCCTTCCGG
T ss_pred             HHHHHhCCcccccccccccCCCCccc
Confidence            99999999999999999876533333

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.81  E-value=4.7e-20  Score=133.24  Aligned_cols=104  Identities=27%  Similarity=0.314  Sum_probs=81.4

Q ss_pred             CCCCCCEEEEecCCC--hHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHH
Q 044851           36 NKLRGMVALVTGGDS--GIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKR  113 (149)
Q Consensus        36 ~~~~~~~~litG~s~--gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  113 (149)
                      ..++||++|||||++  |||+++|++|++.|++|++++|+.....    ..+++..    ......++.+|+++++++++
T Consensus         4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~----~~~~~~~----~~~~~~~~~~D~~~~~~v~~   75 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRP----EAEKLAE----ALGGALLFRADVTQDEELDA   75 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHH----HHHHHHH----HTTCCEEEECCTTCHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHH----HHHHhhh----ccCcccccccccCCHHHHHH
Confidence            358999999999886  8999999999999999999998733222    2222322    23456789999999999999


Q ss_pred             HHHHHHHhcCCccEEEeCCcCCCC---CCCCCCCCCC
Q 044851          114 VVDEVVNAYDRIDILVNNAAEQYE---CGSVEDIDES  147 (149)
Q Consensus       114 ~~~~~~~~~g~id~li~~ag~~~~---~~~~~~~s~~  147 (149)
                      +++++.+++|++|+||||||+...   ...+.+.+.+
T Consensus        76 ~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~  112 (256)
T d1ulua_          76 LFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQ  112 (256)
T ss_dssp             HHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHH
T ss_pred             HHHHHHHhcCCceEEEeccccccccccccchhhhhhh
Confidence            999999999999999999998643   2344555443

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.79  E-value=1.4e-19  Score=130.26  Aligned_cols=100  Identities=16%  Similarity=0.271  Sum_probs=80.7

Q ss_pred             CEEEEecCCChHHHHHHHHHH---HcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFA---QEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~---~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      |++|||||++|||+++|+.|+   +.|++|++++|+....+++.+    +..    .+.++.++.||++|++++++++++
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~----~~~----~~~~~~~~~~Dvs~~~~v~~~~~~   74 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED----LAK----NHSNIHILEIDLRNFDAYDKLVAD   74 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH----HHH----HCTTEEEEECCTTCGGGHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----HHh----cCCcEEEEEEEeccHHHHHHHHhh
Confidence            689999999999999999997   468999999998766554432    222    345788999999999999999999


Q ss_pred             HHH--hcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          118 VVN--AYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       118 ~~~--~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +.+  +++++|+||||||+......+.+.+.++
T Consensus        75 i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~  107 (248)
T d1snya_          75 IEGVTKDQGLNVLFNNAGIAPKSARITAVRSQE  107 (248)
T ss_dssp             HHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHH
T ss_pred             hHHHhhcCCcceEEeeccccccCcccccCCHHH
Confidence            854  6789999999999976645676666543

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.79  E-value=8.3e-20  Score=131.55  Aligned_cols=101  Identities=17%  Similarity=0.265  Sum_probs=79.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC--cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      |..|++|||||++|||+++|++|+++|+  .|++++|+....+   +    +.+.   .+.++.++.||+++.+++++++
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~---~----l~~~---~~~~~~~~~~Dvs~~~~v~~~~   70 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKAT---E----LKSI---KDSRVHVLPLTVTCDKSLDTFV   70 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCH---H----HHTC---CCTTEEEEECCTTCHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHH---H----HHHh---hCCceEEEEEecCCHHHHHHHH
Confidence            3568999999999999999999999997  4788888743322   2    2221   3457889999999999999999


Q ss_pred             HHHHHhcCC--ccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDR--IDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       116 ~~~~~~~g~--id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +++.+.++.  +|+||||||+.....++.+.+.++
T Consensus        71 ~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~  105 (250)
T d1yo6a1          71 SKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAV  105 (250)
T ss_dssp             HHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHH
T ss_pred             HHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHH
Confidence            999987764  999999999876545666666543

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=9.4e-19  Score=127.27  Aligned_cols=104  Identities=21%  Similarity=0.231  Sum_probs=87.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      ++||++|||||++|||+++|++|++.|++|++++|+   .+.+++..+++...   .+..+..+.+|+++.+.+..+++.
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~---~~~l~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~   85 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARS---KETLQKVVSHCLEL---GAASAHYIAGTMEDMTFAEQFVAQ   85 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHH---TCSEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHhhh---hcccchhhhhhhhhHHHHHHHHHH
Confidence            899999999999999999999999999999999997   45555555554432   455677889999999999999999


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      +.+.++.+|+++||+|.... ..+.+.+.++
T Consensus        86 ~~~~~g~~~~li~nag~~~~-~~~~~~~~~~  115 (269)
T d1xu9a_          86 AGKLMGGLDMLILNHITNTS-LNLFHDDIHH  115 (269)
T ss_dssp             HHHHHTSCSEEEECCCCCCC-CCCCCSCHHH
T ss_pred             HHHHhCCccccccccccccc-cccccCCHHH
Confidence            99999999999999998766 6666666543

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.77  E-value=1.7e-18  Score=125.02  Aligned_cols=95  Identities=13%  Similarity=0.156  Sum_probs=77.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCC-ChHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLG-FDENCKRVV  115 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~  115 (149)
                      .++||++|||||++|||+++|++|++.|++|++++|+......+.    ++....  ....+.++.+|++ +.+++++++
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~----~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~   75 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALA----ELKAIN--PKVNITFHTYDVTVPVAESKKLL   75 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHH----HHHHHC--TTSEEEEEECCTTSCHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHH----HHHhhC--CCCCEEEEEeecCCCHHHHHHHH
Confidence            478999999999999999999999999999999988755433332    222110  3456788899998 567899999


Q ss_pred             HHHHHhcCCccEEEeCCcCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~  137 (149)
                      +++.+.+|++|+||||||....
T Consensus        76 ~~~~~~~g~iDilvnnAG~~~~   97 (254)
T d1sbya1          76 KKIFDQLKTVDILINGAGILDD   97 (254)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCT
T ss_pred             HHHHHHcCCCCEEEeCCCCCCH
Confidence            9999999999999999997543

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.76  E-value=2.1e-18  Score=124.74  Aligned_cols=107  Identities=23%  Similarity=0.277  Sum_probs=85.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHH---cCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQ---EGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKR  113 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~---~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  113 (149)
                      .|+||++|||||++|||+++|++|++   .|++|++++|+   .+.+++..+++....  .+.++.++.||+++++++++
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~---~~~l~~~~~~l~~~~--~~~~~~~~~~Dvs~~~~v~~   77 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARS---ESMLRQLKEELGAQQ--PDLKVVLAAADLGTEAGVQR   77 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESC---HHHHHHHHHHHHHHC--TTSEEEEEECCTTSHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECC---HHHHHHHHHHHHhhc--CCceEEEEEccCCCHHHHHH
Confidence            58999999999999999999999986   69999999997   555666666665421  24467889999999999999


Q ss_pred             HHHHHHH----hcCCccEEEeCCcCCCC--CCCCCCCCCCC
Q 044851          114 VVDEVVN----AYDRIDILVNNAAEQYE--CGSVEDIDESR  148 (149)
Q Consensus       114 ~~~~~~~----~~g~id~li~~ag~~~~--~~~~~~~s~~~  148 (149)
                      +++.+.+    .++.+|++|||||+..+  .+++.+.+.++
T Consensus        78 l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~  118 (259)
T d1oaaa_          78 LLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAE  118 (259)
T ss_dssp             HHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHH
T ss_pred             HHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHH
Confidence            9999876    34578999999998653  34566666554

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.76  E-value=4.4e-18  Score=123.90  Aligned_cols=102  Identities=27%  Similarity=0.391  Sum_probs=75.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCC-----------------ceEEEec
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKD-----------------PMAISAD  104 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~D  104 (149)
                      ++|||||++|||+++|++|++.|++|++++++.  ...+++..+++...   .+..                 .....+|
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~--~~~~~~~~~~l~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~d   78 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS--AAEANALSATLNAR---RPNSAITVQADLSNVATAPVSGADGSAP   78 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHHH---STTCEEEEECCCSSSCBCCCC----CCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCC--HHHHHHHHHHHHhh---cCCceEEEEeeccccccccccccccccc
Confidence            799999999999999999999999999988863  44445555555432   1222                 2334567


Q ss_pred             CCChHHHHHHHHHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          105 LGFDENCKRVVDEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       105 v~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      +++.++++++++++.+++|++|+||||||+..+ .++.+.+.++|
T Consensus        79 v~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~-~~~~~~~~~~~  122 (284)
T d1e7wa_          79 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYP-TPLLRNDEDGH  122 (284)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC-CCCCC------
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEecCCccCC-CchhhCCHHHh
Confidence            999999999999999999999999999999876 67777766543

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.75  E-value=3.6e-19  Score=128.46  Aligned_cols=95  Identities=18%  Similarity=0.184  Sum_probs=78.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      ++||||+++|||+++|++|++.|++|++++|+....+++.    ....         .+..+|+++.++++++++++.++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~----~~~~---------~~~~~dv~~~~~~~~~~~~~~~~   68 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE----AFAE---------TYPQLKPMSEQEPAELIEAVTSA   68 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHH----HHHH---------HCTTSEECCCCSHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----hhhC---------cEEEeccCCHHHHHHHHHHHHHH
Confidence            7999999999999999999999999999999744433322    2221         12358999999999999999999


Q ss_pred             cCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          122 YDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       122 ~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      +|+||+||||||+....+++.+++.++|
T Consensus        69 ~G~iDiLVnNAg~~~~~~~~~~~~~e~~   96 (252)
T d1zmta1          69 YGQVDVLVSNDIFAPEFQPIDKYAVEDY   96 (252)
T ss_dssp             HSCCCEEEEECCCCCCCCCGGGSCHHHH
T ss_pred             cCCCCEEEECCcCCCCCCChhhCCHHHH
Confidence            9999999999998765578888887664

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.74  E-value=1.9e-18  Score=124.77  Aligned_cols=103  Identities=19%  Similarity=0.309  Sum_probs=86.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      ++++|||||++|||+++|++|+++|++ |++++|+....+...+.++++..    .+.++.++.||++|.+++.++++.+
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~----~g~~v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEA----LGARTTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHH----TTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHh----ccccccccccccchHHHHHHhhccc
Confidence            458999999999999999999999995 88899875555566677777766    6678899999999999999999987


Q ss_pred             HHhcCCccEEEeCCcCCCCCCCCCCCCCCC
Q 044851          119 VNAYDRIDILVNNAAEQYECGSVEDIDESR  148 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~~~~~~~~~s~~~  148 (149)
                      .+. +++|+||||+|+... .++.+++.++
T Consensus        85 ~~~-~~i~~vv~~ag~~~~-~~~~~~~~~~  112 (259)
T d2fr1a1          85 GDD-VPLSAVFHAAATLDD-GTVDTLTGER  112 (259)
T ss_dssp             CTT-SCEEEEEECCCCCCC-CCGGGCCHHH
T ss_pred             ccc-ccccccccccccccc-cccccccHHH
Confidence            554 589999999999876 6787776543

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.71  E-value=9.9e-18  Score=119.57  Aligned_cols=89  Identities=28%  Similarity=0.406  Sum_probs=71.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      ++||++||||+++|||+++|+.|++.|++|++++|+   .+.+       .+    .  ...++.||+++.      ++.
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~---~~~l-------~~----~--~~~~~~~Dv~~~------~~~   59 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARN---EELL-------KR----S--GHRYVVCDLRKD------LDL   59 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC---HHHH-------HH----T--CSEEEECCTTTC------HHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHH-------Hh----c--CCcEEEcchHHH------HHH
Confidence            689999999999999999999999999999999996   2221       11    1  235678999863      445


Q ss_pred             HHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          118 VVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      +.++++++|+||||||+... .++.+++.++|
T Consensus        60 ~~~~~g~iD~lVnnAG~~~~-~~~~~~~~~~~   90 (234)
T d1o5ia_          60 LFEKVKEVDILVLNAGGPKA-GFFDELTNEDF   90 (234)
T ss_dssp             HHHHSCCCSEEEECCCCCCC-BCGGGCCHHHH
T ss_pred             HHHHhCCCcEEEecccccCC-cchhhhhhHHH
Confidence            66778999999999998765 68888877654

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.71  E-value=3.6e-17  Score=118.66  Aligned_cols=93  Identities=23%  Similarity=0.390  Sum_probs=77.6

Q ss_pred             CCCCCEEEEecCCC--hHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRGMVALVTGGDS--GIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~s~--gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .|+||++||||+++  |||+++|+.|++.|++|++++|+....+    ..+++..    .+....+..+|+++..++.++
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~----~~~~l~~----~~~~~~~~~~d~~~~~~~~~~   73 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEK----RVRPIAQ----ELNSPYVYELDVSKEEHFKSL   73 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHH----HHHHHHH----HTTCCCEEECCTTCHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHHHHh----hCCceeEeeecccchhhHHHH
Confidence            37899999999765  8999999999999999999999743322    3333433    344567789999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~  137 (149)
                      ++++.+.+|.+|++|||+|....
T Consensus        74 ~~~~~~~~g~id~lV~nag~~~~   96 (274)
T d2pd4a1          74 YNSVKKDLGSLDFIVHSVAFAPK   96 (274)
T ss_dssp             HHHHHHHTSCEEEEEECCCCCCG
T ss_pred             HHHHHHHcCCCCeEEeecccccc
Confidence            99999999999999999998654

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.1e-17  Score=122.60  Aligned_cols=103  Identities=21%  Similarity=0.240  Sum_probs=79.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEE---ecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFT---YVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .|++|||||++|||+++|+.|++.|++|+++   .++......+.+..+++..    .+.++..+.||+++.++++.+++
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~Dv~~~~~~~~~~~   77 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALAC----PPGSLETLQLDVRDSKSVAAARE   77 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTC----CTTSEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhc----cCCceEEEeccccchHhhhhhhh
Confidence            4789999999999999999999999985544   4443333334444444333    56678899999999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      ++.+  +.+|+||||+|.... .++.+.+.++|
T Consensus        78 ~~~~--g~idilvnnag~~~~-~~~~~~~~e~~  107 (285)
T d1jtva_          78 RVTE--GRVDVLVCNAGLGLL-GPLEALGEDAV  107 (285)
T ss_dssp             TCTT--SCCSEEEECCCCCCC-SCGGGSCHHHH
T ss_pred             hccc--cchhhhhhccccccc-ccccchhHhhh
Confidence            8743  789999999999776 67887776653

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.69  E-value=2.6e-16  Score=113.33  Aligned_cols=92  Identities=29%  Similarity=0.486  Sum_probs=72.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCC----hHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGF----DENCKRVVD  116 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~----~~~v~~~~~  116 (149)
                      .++|||||++|||+++|++|+++|++|++++|+.  ....++..+++...   .+.......+|+.+    .+.+.++++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHS--EGAAQRLVAELNAA---RAGSAVLCKGDLSLSSSLLDCCEDIID   76 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHHH---STTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCc--hHHHHHHHHHHHhh---cCCceEEEecccccchhHHHHHHHHHH
Confidence            5799999999999999999999999999999973  33344455555442   34455666655544    566778888


Q ss_pred             HHHHhcCCccEEEeCCcCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~  137 (149)
                      ++.+++|++|+||||||+..+
T Consensus        77 ~~~~~~g~iDilvnnAG~~~~   97 (266)
T d1mxha_          77 CSFRAFGRCDVLVNNASAYYP   97 (266)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC
T ss_pred             HHHHHhCCCCEEEECCccCCC
Confidence            899999999999999999775

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=3.6e-17  Score=117.40  Aligned_cols=97  Identities=29%  Similarity=0.419  Sum_probs=75.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+   .+++    +++.+     ...+....+|+.+.+.    +
T Consensus         2 ~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~---~~~l----~~~~~-----~~~~~~~~~d~~~~~~----~   65 (245)
T d2ag5a1           2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDIN---ESKL----QELEK-----YPGIQTRVLDVTKKKQ----I   65 (245)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC---HHHH----GGGGG-----STTEEEEECCTTCHHH----H
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC---HHHH----HHHHh-----ccCCceeeeecccccc----c
Confidence            35899999999999999999999999999999999997   2222    22222     2345677788876554    4


Q ss_pred             HHHHHhcCCccEEEeCCcCCCCCCCCCCCCCCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQYECGSVEDIDESRL  149 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~~~~~~~~~s~~~~  149 (149)
                      +.+.+.++++|+||||+|.... +++.+++.++|
T Consensus        66 ~~~~~~~~~id~lVn~ag~~~~-~~~~~~~~~~~   98 (245)
T d2ag5a1          66 DQFANEVERLDVLFNVAGFVHH-GTVLDCEEKDW   98 (245)
T ss_dssp             HHHHHHCSCCSEEEECCCCCCC-BCGGGCCHHHH
T ss_pred             cccccccccceeEEecccccCC-CChhhCCHHHH
Confidence            4555667899999999999876 77888876654

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.61  E-value=2.4e-15  Score=103.97  Aligned_cols=85  Identities=19%  Similarity=0.196  Sum_probs=67.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      ..++||++|||||++|||+++++.|++.|++|++++|+   .+.+.+..+++..     ...+.+..+|+++.+++++++
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~   90 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK---LDKAQAAADSVNK-----RFKVNVTAAETADDASRAEAV   90 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHHHH-----HHTCCCEEEECCSHHHHHHHT
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccc---hHHHHHHHHHHHh-----ccchhhhhhhcccHHHHHHHh
Confidence            35899999999999999999999999999999999998   4444455555543     123456789999988776554


Q ss_pred             HHHHHhcCCccEEEeCCcCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~  135 (149)
                             +++|+||||+|+.
T Consensus        91 -------~~iDilin~Ag~g  103 (191)
T d1luaa1          91 -------KGAHFVFTAGAIG  103 (191)
T ss_dssp             -------TTCSEEEECCCTT
T ss_pred             -------cCcCeeeecCccc
Confidence                   5789999999973

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.61  E-value=3.4e-15  Score=107.57  Aligned_cols=91  Identities=19%  Similarity=0.212  Sum_probs=72.7

Q ss_pred             CCCCCEEEEecC--CChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRGMVALVTGG--DSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~--s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .|+||++||||+  ++|||+++|++|++.|++|++++++.   .++.+.   +.+.   .+.....+.||+++.+++.++
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~---~~~~~~---~~~~---~~~~~~~~~~dv~~~~~~~~~   73 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR---LRLIQR---ITDR---LPAKAPLLELDVQNEEHLASL   73 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSC---HHHHHH---HHTT---SSSCCCEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCCh---HHHHHH---HHHH---cCCceeeEeeecccccccccc
Confidence            479999999995  57899999999999999999999873   222222   2221   345677889999999999999


Q ss_pred             HHHHHHhc---CCccEEEeCCcCCC
Q 044851          115 VDEVVNAY---DRIDILVNNAAEQY  136 (149)
Q Consensus       115 ~~~~~~~~---g~id~li~~ag~~~  136 (149)
                      ++.+.+.+   +.+|++|||+|+..
T Consensus        74 ~~~v~~~~~~~~~ld~~i~~ag~~~   98 (268)
T d2h7ma1          74 AGRVTEAIGAGNKLDGVVHSIGFMP   98 (268)
T ss_dssp             HHHHHHHHCTTCCEEEEEECCCCCC
T ss_pred             cchhhhccccCCCcceeeecccccC
Confidence            99987664   67999999999764

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.60  E-value=1e-15  Score=111.90  Aligned_cols=109  Identities=25%  Similarity=0.296  Sum_probs=74.7

Q ss_pred             CCCCCEEEEecCCC--hHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccC------CCCC--Cc-eEEEec-
Q 044851           37 KLRGMVALVTGGDS--GIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKT------PDAK--DP-MAISAD-  104 (149)
Q Consensus        37 ~~~~~~~litG~s~--gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~------~~~~--~~-~~~~~D-  104 (149)
                      .++||++||||+++  |||+++|++|++.|++|++++|+..    .............      ....  .. ....+| 
T Consensus         5 ~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (297)
T d1d7oa_           5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPA----LNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDA   80 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHH----HHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECT
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchh----hhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            48999999999875  9999999999999999999998521    1111111111000      0000  11 122233 


Q ss_pred             -------------------CCChHHHHHHHHHHHHhcCCccEEEeCCcCCCC-CCCCCCCCCCCC
Q 044851          105 -------------------LGFDENCKRVVDEVVNAYDRIDILVNNAAEQYE-CGSVEDIDESRL  149 (149)
Q Consensus       105 -------------------v~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~s~~~~  149 (149)
                                         .++..+++.+++++.+++|+||+||||||.... .+++.+++.++|
T Consensus        81 ~~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~  145 (297)
T d1d7oa_          81 VFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGY  145 (297)
T ss_dssp             TCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHH
T ss_pred             hccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccc
Confidence                               355667889999999999999999999998543 357888776654

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.58  E-value=8.3e-15  Score=105.12  Aligned_cols=93  Identities=23%  Similarity=0.316  Sum_probs=77.0

Q ss_pred             CCCCCEEEEecCCC--hHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRGMVALVTGGDS--GIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~s~--gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .|+||++|||||++  |||+++|+.|++.|++|++++|+......    .+++..    ......++.+|+++..++...
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~----~~~~~~----~~~~~~~~~~~~~~~~~~~~~   73 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGR----VEEFAA----QLGSDIVLQCDVAEDASIDTM   73 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHH----HHHHHH----HTTCCCEEECCTTCHHHHHHH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHH----HHHHHh----hcCCcceeecccchHHHHHHH
Confidence            37899999999998  89999999999999999999997433222    233332    234567788999999999999


Q ss_pred             HHHHHHhcCCccEEEeCCcCCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~~  137 (149)
                      +.++.+.++++|++|||++....
T Consensus        74 ~~~~~~~~~~~d~~v~~a~~~~~   96 (258)
T d1qsga_          74 FAELGKVWPKFDGFVHSIGFAPG   96 (258)
T ss_dssp             HHHHHTTCSSEEEEEECCCCCCG
T ss_pred             HHHhhhcccccceEEEeeccccc
Confidence            99999999999999999988654

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2.3e-14  Score=102.37  Aligned_cols=91  Identities=22%  Similarity=0.386  Sum_probs=77.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .++||++|||||++|||+++|++|++.|++|++++|+....   ++..+++       +.......+|+.+.+.++..+.
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~---~~~~~~l-------~~~~~~~~~~~~~~~~~~~~~~   71 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGG---EAQAKKL-------GNNCVFAPADVTSEKDVQTALA   71 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSH---HHHHHHH-------CTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH---HHHHHHh-------CCCccccccccccccccccccc
Confidence            58999999999999999999999999999999999985443   3334333       3456788899999999999999


Q ss_pred             HHHHhcCCccEEEeCCcCCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~~  137 (149)
                      .+...++.+|.+++|+++...
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~   92 (248)
T d2o23a1          72 LAKGKFGRVDVAVNCAGIAVA   92 (248)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC
T ss_pred             ccccccccccccccccccccC
Confidence            999999999999999987664

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.56  E-value=3.1e-15  Score=106.50  Aligned_cols=90  Identities=20%  Similarity=0.212  Sum_probs=69.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      +||++||||+++|||+++|+.|++.|++|++++++...                 .......+.+|..+.++++.++..+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~   63 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE-----------------EASASVIVKMTDSFTEQADQVTAEV   63 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCT-----------------TSSEEEECCCCSCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc-----------------cccccceeecccCcHHHHHHHHHHH
Confidence            58999999999999999999999999999999886432                 1122345667888888888888887


Q ss_pred             HHhcC--CccEEEeCCcCCCCCCCCCCCC
Q 044851          119 VNAYD--RIDILVNNAAEQYECGSVEDID  145 (149)
Q Consensus       119 ~~~~g--~id~li~~ag~~~~~~~~~~~s  145 (149)
                      .+.++  ++|+||||||.......+.+.+
T Consensus        64 ~~~~~~~~iD~lInnAG~~~~~~~~~~~~   92 (236)
T d1dhra_          64 GKLLGDQKVDAILCVAGGWAGGNAKSKSL   92 (236)
T ss_dssp             HHHHTTCCEEEEEECCCCCCCBCTTCTTH
T ss_pred             HHHhCCCCceEEEECCcccccccchhcCC
Confidence            76554  6999999999755434444443

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.52  E-value=1.5e-14  Score=107.49  Aligned_cols=108  Identities=11%  Similarity=0.153  Sum_probs=74.0

Q ss_pred             CCCEEEEec--CCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccC-----CC---CCCceEE-------
Q 044851           39 RGMVALVTG--GDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKT-----PD---AKDPMAI-------  101 (149)
Q Consensus        39 ~~~~~litG--~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~-------  101 (149)
                      .+|++||||  +++|||+++|+.|++.|++|+++++........   ......+..     ..   .......       
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFM---KNYKNGKFDNDMIIDKDKKMNILDMLPFDASFD   77 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHH---HHHHTTTTTGGGEETTTEECCEEEEEECCTTCS
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhh---HHHHHHhhhhHHHHHHHhhhhhhhcccccceeh
Confidence            368999999  557999999999999999999998863221111   111110000     00   0001112       


Q ss_pred             -------------EecCCChHHHHHHHHHHHHhcCCccEEEeCCcCCCC-CCCCCCCCCCCC
Q 044851          102 -------------SADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYE-CGSVEDIDESRL  149 (149)
Q Consensus       102 -------------~~Dv~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~s~~~~  149 (149)
                                   .+|+++.++++.+++++.+.+|+||+||||+|.... .+++.+++.++|
T Consensus        78 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~  139 (329)
T d1uh5a_          78 TANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGY  139 (329)
T ss_dssp             SGGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHH
T ss_pred             hhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhh
Confidence                         247778889999999999999999999999998654 346777776543

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.51  E-value=9.8e-15  Score=103.72  Aligned_cols=86  Identities=15%  Similarity=0.251  Sum_probs=64.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      +++|||||++|||+++|++|++.|++|++++|+....                 ......+.+|+.+.+......+.+..
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~   65 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ-----------------ADSNILVDGNKNWTEQEQSILEQTAS   65 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT-----------------SSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc-----------------ccccceeccccCchhHHHHHHHHHHH
Confidence            3579999999999999999999999999999974321                 12234556788877777777777665


Q ss_pred             --hcCCccEEEeCCcCCCCCCCCCC
Q 044851          121 --AYDRIDILVNNAAEQYECGSVED  143 (149)
Q Consensus       121 --~~g~id~li~~ag~~~~~~~~~~  143 (149)
                        .+++||+||||||+.....++.+
T Consensus        66 ~~~~g~iD~linnAG~~~~~~~~~~   90 (235)
T d1ooea_          66 SLQGSQVDGVFCVAGGWAGGSASSK   90 (235)
T ss_dssp             HHTTCCEEEEEECCCCCCCBCTTST
T ss_pred             HhcCCCeeEEEECCccccccccccc
Confidence              45899999999998654333433

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.27  E-value=1.9e-11  Score=87.04  Aligned_cols=73  Identities=23%  Similarity=0.322  Sum_probs=59.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      |++||||+++|||+++|++|++.|++|++++++...                        ..+|+.+.........++..
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~------------------------~~~d~~~~~~~~~~~~~~~~   57 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE------------------------VIADLSTAEGRKQAIADVLA   57 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS------------------------EECCTTSHHHHHHHHHHHHT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH------------------------HHHHhcCHHHHHHHHHHHHH
Confidence            689999999999999999999999999999986211                        23688888887777666654


Q ss_pred             hc-CCccEEEeCCcCCCC
Q 044851          121 AY-DRIDILVNNAAEQYE  137 (149)
Q Consensus       121 ~~-g~id~li~~ag~~~~  137 (149)
                      +. +.+|++|||||+...
T Consensus        58 ~~~~~id~lv~~Ag~~~~   75 (257)
T d1fjha_          58 KCSKGMDGLVLCAGLGPQ   75 (257)
T ss_dssp             TCTTCCSEEEECCCCCTT
T ss_pred             HhCCCCcEEEEcCCCCCc
Confidence            44 579999999998643

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.22  E-value=3.3e-11  Score=89.75  Aligned_cols=90  Identities=20%  Similarity=0.139  Sum_probs=63.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      |.+|||||+|.||..++++|++.|+.|++++|......  ...++.+.........++.++.+|++|.+++++++...  
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFN--TERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV--   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHHHHH--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccc--hhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc--
Confidence            78999999999999999999999999999998532111  01111111100013456788999999999999998876  


Q ss_pred             hcCCccEEEeCCcCCCC
Q 044851          121 AYDRIDILVNNAAEQYE  137 (149)
Q Consensus       121 ~~g~id~li~~ag~~~~  137 (149)
                         .+|++||+|+....
T Consensus        78 ---~~d~v~h~aa~~~~   91 (357)
T d1db3a_          78 ---QPDEVYNLGAMSHV   91 (357)
T ss_dssp             ---CCSEEEECCCCCTT
T ss_pred             ---CCCEEEEeeccccc
Confidence               78999999998664

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.20  E-value=7.7e-11  Score=88.49  Aligned_cols=89  Identities=15%  Similarity=0.095  Sum_probs=65.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC-------------CCChHHHHHHHHHHHhccCCCCCCceEEEecCC
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK-------------PQEDKDAKETLEMLREAKTPDAKDPMAISADLG  106 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~  106 (149)
                      |+.+|||||+|.||.+++++|++.|+.|++++.-             ........+.+..+...   ...++.++.+|++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~Dl~   77 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL---TGKSIELYVGDIC   77 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH---HCCCCEEEESCTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhh---cCCCcEEEEccCC
Confidence            6789999999999999999999999999988620             00011111222222211   2456889999999


Q ss_pred             ChHHHHHHHHHHHHhcCCccEEEeCCcCCC
Q 044851          107 FDENCKRVVDEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       107 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~  136 (149)
                      |.+.+..++...     ++|+|||.|+...
T Consensus        78 d~~~l~~~~~~~-----~~d~ViHlAa~~~  102 (393)
T d1i24a_          78 DFEFLAESFKSF-----EPDSVVHFGEQRS  102 (393)
T ss_dssp             SHHHHHHHHHHH-----CCSEEEECCSCCC
T ss_pred             CHHHHHHHHHhh-----cchheeccccccc
Confidence            999999988876     7999999998754

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.20  E-value=6.9e-11  Score=87.30  Aligned_cols=86  Identities=21%  Similarity=0.134  Sum_probs=69.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .++|++|||||+|.||..+++.|++.|+.|++++|+......+.+..   .     ....+.++.+|++|.+.+.+++..
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~---~-----~~~~i~~~~~Dl~d~~~l~~~~~~   77 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETA---R-----VADGMQSEIGDIRDQNKLLESIRE   77 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHT---T-----TTTTSEEEECCTTCHHHHHHHHHH
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhh---h-----cccCCeEEEeeccChHhhhhhhhh
Confidence            47899999999999999999999999999999999865443322211   1     234588999999999988887776


Q ss_pred             HHHhcCCccEEEeCCcCCC
Q 044851          118 VVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~  136 (149)
                      .     .+|+++|.|+...
T Consensus        78 ~-----~~~~v~~~aa~~~   91 (356)
T d1rkxa_          78 F-----QPEIVFHMAAQPL   91 (356)
T ss_dssp             H-----CCSEEEECCSCCC
T ss_pred             c-----hhhhhhhhhcccc
Confidence            6     7899999998754

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.19  E-value=7.6e-11  Score=82.95  Aligned_cols=77  Identities=26%  Similarity=0.377  Sum_probs=63.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +|++|||||++|||+++|++|++.|++|++++|+..                   ..+...+.+|+++...+..+.....
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~-------------------~~~~~~~~~d~~~~~~~~~~~~~~~   61 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-------------------GEDLIYVEGDVTREEDVRRAVARAQ   61 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-------------------SSSSEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc-------------------cccceEeeccccchhhhHHHHHhhh
Confidence            589999999999999999999999999999999732                   2345678899999999999888887


Q ss_pred             HhcCCccEEEeCCcCCC
Q 044851          120 NAYDRIDILVNNAAEQY  136 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~  136 (149)
                      .... .+.++++++...
T Consensus        62 ~~~~-~~~~~~~~~~~~   77 (241)
T d1uaya_          62 EEAP-LFAVVSAAGVGL   77 (241)
T ss_dssp             HHSC-EEEEEECCCCCC
T ss_pred             cccc-ccchhhhhhccc
Confidence            7654 566666666543

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.17  E-value=1.5e-10  Score=85.38  Aligned_cols=84  Identities=23%  Similarity=0.311  Sum_probs=64.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      .+|||||+|.||..++++|++.|+.|+++++-...........+.+.      ..++.++++|++|.+.+.+++...   
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~------~~~~~~~~~Dl~d~~~l~~~~~~~---   72 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG------GKHPTFVEGDIRNEALMTEILHDH---   72 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH------TSCCEEEECCTTCHHHHHHHHHHT---
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc------CCCCEEEEeecCCHHHHHHHHhcc---
Confidence            49999999999999999999999999998764333322222222222      346889999999999888888764   


Q ss_pred             cCCccEEEeCCcCCC
Q 044851          122 YDRIDILVNNAAEQY  136 (149)
Q Consensus       122 ~g~id~li~~ag~~~  136 (149)
                        ++|+|||+|+...
T Consensus        73 --~~d~ViHlAa~~~   85 (338)
T d1udca_          73 --AIDTVIHFAGLKA   85 (338)
T ss_dssp             --TCSEEEECCSCCC
T ss_pred             --CCCEEEECCCccc
Confidence              6899999998754

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.17  E-value=1.5e-10  Score=85.52  Aligned_cols=85  Identities=22%  Similarity=0.241  Sum_probs=64.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      |.+|||||+|.||..++++|++.|++|+++++..............+      ....+.++.+|+.|.+.++.++...  
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~------~~~~v~~~~~Dl~d~~~l~~~~~~~--   73 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL------TKHHIPFYEVDLCDRKGLEKVFKEY--   73 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHH------HTSCCCEEECCTTCHHHHHHHHHHS--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhh------cccCCeEEEeecCCHHHHHHHHhcc--
Confidence            68999999999999999999999999998875432222211122222      2345788999999999988887754  


Q ss_pred             hcCCccEEEeCCcCCC
Q 044851          121 AYDRIDILVNNAAEQY  136 (149)
Q Consensus       121 ~~g~id~li~~ag~~~  136 (149)
                         ++|+|||+|+...
T Consensus        74 ---~~d~VihlAa~~~   86 (347)
T d1z45a2          74 ---KIDSVIHFAGLKA   86 (347)
T ss_dssp             ---CCCEEEECCSCCC
T ss_pred             ---CCCEEEEcccccc
Confidence               6999999999754

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=1.1e-10  Score=80.66  Aligned_cols=79  Identities=10%  Similarity=0.061  Sum_probs=62.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      ..|+++||||+|.||.+++++|+++|+.|+++.|++.+...             .....+.++.+|++|.+++.+++.  
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~-------------~~~~~~~~~~gD~~d~~~l~~al~--   66 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-------------EGPRPAHVVVGDVLQAADVDKTVA--   66 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-------------SSCCCSEEEESCTTSHHHHHHHHT--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc-------------ccccccccccccccchhhHHHHhc--
Confidence            34679999999999999999999999999999997433211             023457889999999987766654  


Q ss_pred             HHhcCCccEEEeCCcCCCC
Q 044851          119 VNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~~  137 (149)
                           ..|+||+++|....
T Consensus        67 -----~~d~vi~~~g~~~~   80 (205)
T d1hdoa_          67 -----GQDAVIVLLGTRND   80 (205)
T ss_dssp             -----TCSEEEECCCCTTC
T ss_pred             -----CCCEEEEEeccCCc
Confidence                 47999999987543

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.11  E-value=5.9e-10  Score=81.25  Aligned_cols=83  Identities=14%  Similarity=0.163  Sum_probs=64.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      .+|||||+|.||..+++.|+++|+.|+++++-.....  .+.+..+.     ...++.++.+|+.+.+++..++...   
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~--~~~~~~~~-----~~~~~~~i~~Di~~~~~l~~~~~~~---   71 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGA--TDNLHWLS-----SLGNFEFVHGDIRNKNDVTRLITKY---   71 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTH--HHHHHHHH-----TTCCCEEEECCTTCHHHHHHHHHHH---
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccc--hhHHHHhh-----ccCCcEEEEcccCCHHHHHHHHHhc---
Confidence            4899999999999999999999999998864322111  12222232     3456889999999999998888876   


Q ss_pred             cCCccEEEeCCcCCC
Q 044851          122 YDRIDILVNNAAEQY  136 (149)
Q Consensus       122 ~g~id~li~~ag~~~  136 (149)
                        ++|++||+|+...
T Consensus        72 --~~d~Vih~aa~~~   84 (338)
T d1orra_          72 --MPDSCFHLAGQVA   84 (338)
T ss_dssp             --CCSEEEECCCCCC
T ss_pred             --CCceEEeeccccc
Confidence              6899999998754

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.08  E-value=3.6e-10  Score=82.84  Aligned_cols=85  Identities=19%  Similarity=0.096  Sum_probs=63.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCC-----hHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQE-----DKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      |++|||||+|.||..+++.|++.|+.|+.++|....     ...+......+      ....+.+..+|+++.+.+...+
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~Di~~~~~~~~~~   75 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV------NKALMKLHYADLTDASSLRRWI   75 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------------CCEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhc------cccceEEEEccccCHHHHHHHH
Confidence            789999999999999999999999999999985321     11111111111      2345678889999999988888


Q ss_pred             HHHHHhcCCccEEEeCCcCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~  136 (149)
                      ...     ++|+|||+|+...
T Consensus        76 ~~~-----~~D~Vih~Aa~~~   91 (339)
T d1n7ha_          76 DVI-----KPDEVYNLAAQSH   91 (339)
T ss_dssp             HHH-----CCSEEEECCSCCC
T ss_pred             hhh-----ccchhhhcccccc
Confidence            765     7999999999754

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=2.6e-09  Score=78.61  Aligned_cols=85  Identities=14%  Similarity=0.062  Sum_probs=64.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecC------CCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK------PQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      |.+|||||+|.||.+++++|++.|+.|+.+++.      .............+      ...++.++.+|++|.+.+..+
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~l~~~   76 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL------TGRSVEFEEMDILDQGALQRL   76 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH------HTCCCEEEECCTTCHHHHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh------cCCCcEEEEeecccccccccc
Confidence            679999999999999999999999999988642      11122222333333      235678999999999988887


Q ss_pred             HHHHHHhcCCccEEEeCCcCCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~~  136 (149)
                      +...     .+++++|+|+...
T Consensus        77 ~~~~-----~~~~i~h~Aa~~~   93 (346)
T d1ek6a_          77 FKKY-----SFMAVIHFAGLKA   93 (346)
T ss_dssp             HHHC-----CEEEEEECCSCCC
T ss_pred             cccc-----ccccccccccccC
Confidence            7653     6889999999754

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.91  E-value=2.1e-09  Score=78.07  Aligned_cols=84  Identities=21%  Similarity=0.149  Sum_probs=64.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      |++|||||+|.||..+++.|++.|+.|+.++|......  ...++.+.     ...++.++.+|++|...+..++...  
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~~--   71 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELG-----IEGDIQYEDGDMADACSVQRAVIKA--   71 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHTT-----CGGGEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHhc-----ccCCcEEEEccccChHHhhhhhccc--
Confidence            68999999999999999999999999999998743322  11222221     2345788999999999888887776  


Q ss_pred             hcCCccEEEeCCcCCC
Q 044851          121 AYDRIDILVNNAAEQY  136 (149)
Q Consensus       121 ~~g~id~li~~ag~~~  136 (149)
                         ..++++++++...
T Consensus        72 ---~~~~~~~~a~~~~   84 (321)
T d1rpna_          72 ---QPQEVYNLAAQSF   84 (321)
T ss_dssp             ---CCSEEEECCSCCC
T ss_pred             ---ccccccccccccc
Confidence               6788888887644

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.90  E-value=5.2e-09  Score=72.19  Aligned_cols=76  Identities=16%  Similarity=0.127  Sum_probs=57.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCc--EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGAT--VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~--Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      +++|||||+|.||.+++++|++.|+.  |+...|++   ...    .   .    ....+.++.+|+.+.+++.+++.  
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~---~~~----~---~----~~~~~~~~~~d~~~~~~~~~~~~--   67 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSA---QGK----E---K----IGGEADVFIGDITDADSINPAFQ--   67 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCH---HHH----H---H----TTCCTTEEECCTTSHHHHHHHHT--
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCH---HHH----H---h----ccCCcEEEEeeeccccccccccc--
Confidence            47999999999999999999999977  44455542   111    1   1    23467889999999987766553  


Q ss_pred             HHhcCCccEEEeCCcCCCC
Q 044851          119 VNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~~  137 (149)
                           .+|.+||+++....
T Consensus        68 -----~~d~vi~~a~~~~~   81 (252)
T d2q46a1          68 -----GIDALVILTSAVPK   81 (252)
T ss_dssp             -----TCSEEEECCCCCCE
T ss_pred             -----cceeeEEEEeeccc
Confidence                 57999999987553

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.88  E-value=2.5e-09  Score=79.57  Aligned_cols=84  Identities=21%  Similarity=0.222  Sum_probs=60.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      .+|||||+|.||..++++|++.|+.|++...+....... ..+..+.     ....+.++.+|++|...+..+++..   
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~-~~~~~~~-----~~~~~~~~~~Dl~d~~~l~~~~~~~---   72 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNL-ESLSDIS-----ESNRYNFEHADICDSAEITRIFEQY---   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCG-GGGTTTT-----TCTTEEEEECCTTCHHHHHHHHHHH---
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccH-HHHHhhh-----hcCCcEEEEccCCCHHHHHHHHHhC---
Confidence            489999999999999999999999855443321111111 1111111     3456788999999999998888765   


Q ss_pred             cCCccEEEeCCcCCC
Q 044851          122 YDRIDILVNNAAEQY  136 (149)
Q Consensus       122 ~g~id~li~~ag~~~  136 (149)
                        .+|+|||+|+...
T Consensus        73 --~~d~VihlAa~~~   85 (361)
T d1kewa_          73 --QPDAVMHLAAESH   85 (361)
T ss_dssp             --CCSEEEECCSCCC
T ss_pred             --CCCEEEECccccc
Confidence              7999999999754

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=98.84  E-value=1.9e-09  Score=79.48  Aligned_cols=87  Identities=15%  Similarity=0.113  Sum_probs=60.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      ..||++|||||+|.||..++++|+++|+.|+.+.|+......+..... ...    .......+..|+.+..++..++. 
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~-~~~----~~~~~~~~~~Dl~~~~~~~~~~~-   82 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWD-AKY----PGRFETAVVEDMLKQGAYDEVIK-   82 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH-HHS----TTTEEEEECSCTTSTTTTTTTTT-
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhh-ccc----cccccEEEeccccchhhhhhhcc-
Confidence            358999999999999999999999999999999987322222222111 111    22223446679998876555442 


Q ss_pred             HHHhcCCccEEEeCCcCCC
Q 044851          118 VVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~~  136 (149)
                            ..|.++++++...
T Consensus        83 ------~~~~v~~~a~~~~   95 (342)
T d1y1pa1          83 ------GAAGVAHIASVVS   95 (342)
T ss_dssp             ------TCSEEEECCCCCS
T ss_pred             ------cchhhhhhccccc
Confidence                  5799999998754

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=7.2e-09  Score=75.98  Aligned_cols=88  Identities=16%  Similarity=0.088  Sum_probs=62.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChH--HHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDK--DAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      |.||||||+|.||..+++.|.+.|+.|+.++|......  .+.........   .....+.++.+|++|.+.+..++...
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQA---HIEGNMKLHYGDLTDSTCLVKIINEV   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC------------CEEEEECCTTCHHHHHHHHHHH
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhh---hccCCcEEEEeecCCchhhHHHHhhc
Confidence            44599999999999999999999999999998643211  11111110000   02346789999999999999888876


Q ss_pred             HHhcCCccEEEeCCcCCC
Q 044851          119 VNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~  136 (149)
                           .++++++.++...
T Consensus        79 -----~~~~v~~~~a~~~   91 (347)
T d1t2aa_          79 -----KPTEIYNLGAQSH   91 (347)
T ss_dssp             -----CCSEEEECCSCCC
T ss_pred             -----ccceeeeeeeccc
Confidence                 6888998888653

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=98.79  E-value=2.3e-08  Score=74.46  Aligned_cols=91  Identities=15%  Similarity=0.115  Sum_probs=60.7

Q ss_pred             EEEEecCCChHHHHHHHHHHH-cCCcEEEEecCCC------ChHHHHHHHHHHHhc----cCCCCCCceEEEecCCChHH
Q 044851           42 VALVTGGDSGIGRAVCHCFAQ-EGATVAFTYVKPQ------EDKDAKETLEMLREA----KTPDAKDPMAISADLGFDEN  110 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~-~g~~Vi~~~~~~~------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~Dv~~~~~  110 (149)
                      .+|||||+|.||..++++|++ .|++|+++++-..      ...........+...    .........++.+|++|.+.
T Consensus         4 KVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~   83 (383)
T d1gy8a_           4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDF   83 (383)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHHH
Confidence            599999999999999999986 5888998863110      011111222222111    00122356788999999988


Q ss_pred             HHHHHHHHHHhcCCccEEEeCCcCCC
Q 044851          111 CKRVVDEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       111 v~~~~~~~~~~~g~id~li~~ag~~~  136 (149)
                      +.+++..    ...+|+|||+|+...
T Consensus        84 l~~~~~~----~~~~d~ViH~Aa~~~  105 (383)
T d1gy8a_          84 LNGVFTR----HGPIDAVVHMCAFLA  105 (383)
T ss_dssp             HHHHHHH----SCCCCEEEECCCCCC
T ss_pred             hhhhhhc----cceeehhhccccccc
Confidence            7777754    356899999999754

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=98.77  E-value=5.7e-08  Score=69.50  Aligned_cols=82  Identities=15%  Similarity=0.201  Sum_probs=59.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHH-HHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKD-AKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      ++|||||+|.||..++++|.++|+.|+++.|+...... ..+....+.      ...+.++.+|+.+.+.+...+.    
T Consensus         5 KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~------~~~v~~v~~d~~d~~~~~~~~~----   74 (312)
T d1qyda_           5 RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK------QLGAKLIEASLDDHQRLVDALK----   74 (312)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH------TTTCEEECCCSSCHHHHHHHHT----
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc------cCCcEEEEeecccchhhhhhcc----
Confidence            49999999999999999999999999999987543322 122222222      3457888999999887665543    


Q ss_pred             hcCCccEEEeCCcCCC
Q 044851          121 AYDRIDILVNNAAEQY  136 (149)
Q Consensus       121 ~~g~id~li~~ag~~~  136 (149)
                         ..+.++++++...
T Consensus        75 ---~~~~~~~~~~~~~   87 (312)
T d1qyda_          75 ---QVDVVISALAGGV   87 (312)
T ss_dssp             ---TCSEEEECCCCSS
T ss_pred             ---Ccchhhhhhhhcc
Confidence               4678888776543

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.75  E-value=4.1e-08  Score=69.75  Aligned_cols=83  Identities=14%  Similarity=0.227  Sum_probs=60.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHH--HHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA--KETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .|++|||||+|.||..++++|++.|+.|++++|+.......  ......+.      ...+.++.+|+.+.......+. 
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK------ASGANIVHGSIDDHASLVEAVK-   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH------TTTCEEECCCTTCHHHHHHHHH-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc------cCCcEEEEeecccchhhhhhhh-
Confidence            35699999999999999999999999999999875543222  22222222      2346788899999887665554 


Q ss_pred             HHHhcCCccEEEeCCcCC
Q 044851          118 VVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~  135 (149)
                            ..+.+|++++..
T Consensus        76 ------~~~~vi~~~~~~   87 (307)
T d1qyca_          76 ------NVDVVISTVGSL   87 (307)
T ss_dssp             ------TCSEEEECCCGG
T ss_pred             ------hceeeeeccccc
Confidence                  467888888654

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=98.75  E-value=1.9e-08  Score=73.71  Aligned_cols=77  Identities=13%  Similarity=0.085  Sum_probs=56.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      .+|||||+|.||..++++|++.|. .|+++++.......   ..         ...++.++.+|+++.+++.+.+.   +
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~---~~---------~~~~~~~i~~Di~~~~~~~~~~~---~   66 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR---FL---------NHPHFHFVEGDISIHSEWIEYHV---K   66 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGG---GT---------TCTTEEEEECCTTTCSHHHHHHH---H
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhh---hc---------cCCCeEEEECccCChHHHHHHHH---h
Confidence            489999999999999999999994 68888775322111   11         24568899999998776544332   2


Q ss_pred             hcCCccEEEeCCcCCC
Q 044851          121 AYDRIDILVNNAAEQY  136 (149)
Q Consensus       121 ~~g~id~li~~ag~~~  136 (149)
                         .+|+|||+|+...
T Consensus        67 ---~~d~Vih~a~~~~   79 (342)
T d2blla1          67 ---KCDVVLPLVAIAT   79 (342)
T ss_dssp             ---HCSEEEECBCCCC
T ss_pred             ---CCCcccccccccc
Confidence               3799999999754

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=5.9e-09  Score=72.98  Aligned_cols=79  Identities=11%  Similarity=0.149  Sum_probs=57.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC--cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .+++|.+|||||+|.||.+++++|.+.|.  +|+++.|++......             ....+....+|+.+.+++.  
T Consensus        11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~-------------~~~~i~~~~~D~~~~~~~~--   75 (232)
T d2bkaa1          11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-------------AYKNVNQEVVDFEKLDDYA--   75 (232)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-------------GGGGCEEEECCGGGGGGGG--
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc-------------ccceeeeeeeccccccccc--
Confidence            46788999999999999999999999995  699999975432210             1223455667877665432  


Q ss_pred             HHHHHHhcCCccEEEeCCcCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~  135 (149)
                           +.+...|++||++|..
T Consensus        76 -----~~~~~~d~vi~~~~~~   91 (232)
T d2bkaa1          76 -----SAFQGHDVGFCCLGTT   91 (232)
T ss_dssp             -----GGGSSCSEEEECCCCC
T ss_pred             -----cccccccccccccccc
Confidence                 3334689999999864

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=98.66  E-value=3.9e-08  Score=69.73  Aligned_cols=62  Identities=21%  Similarity=0.286  Sum_probs=53.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      .+|||||+|.||..++++|.++|+.|+.++|+.                            +|+.|.+++.+++...   
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------------------~D~~d~~~~~~~l~~~---   51 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------------LDITNVLAVNKFFNEK---   51 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------------CCTTCHHHHHHHHHHH---
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------------------ccCCCHHHHHHHHHHc---
Confidence            499999999999999999999999999888741                            4888988888887765   


Q ss_pred             cCCccEEEeCCcCCC
Q 044851          122 YDRIDILVNNAAEQY  136 (149)
Q Consensus       122 ~g~id~li~~ag~~~  136 (149)
                        ++|+|||+++...
T Consensus        52 --~~d~vih~a~~~~   64 (281)
T d1vl0a_          52 --KPNVVINCAAHTA   64 (281)
T ss_dssp             --CCSEEEECCCCCC
T ss_pred             --CCCEEEeeccccc
Confidence              6899999998754

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.63  E-value=8.5e-08  Score=70.71  Aligned_cols=78  Identities=26%  Similarity=0.246  Sum_probs=57.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      ++..+|||||+|.||..+++.|.+.|+.|+++++.......         .    ......+..+|+.+.+.+..++.  
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~---------~----~~~~~~~~~~D~~~~~~~~~~~~--   78 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT---------E----DMFCDEFHLVDLRVMENCLKVTE--   78 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC---------G----GGTCSEEEECCTTSHHHHHHHHT--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh---------h----hcccCcEEEeechhHHHHHHHhh--
Confidence            45569999999999999999999999999998875332110         0    12234677789888776544432  


Q ss_pred             HHhcCCccEEEeCCcCCC
Q 044851          119 VNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~  136 (149)
                           .+|.+||+|+...
T Consensus        79 -----~~d~Vih~a~~~~   91 (363)
T d2c5aa1          79 -----GVDHVFNLAADMG   91 (363)
T ss_dssp             -----TCSEEEECCCCCC
T ss_pred             -----cCCeEeecccccc
Confidence                 5899999998754

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.58  E-value=2.4e-07  Score=67.90  Aligned_cols=78  Identities=14%  Similarity=0.104  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      +.|+++||||+|.||.+++++|++.|++|+++.|++.+.. ..    .+.     ....+.++.+|+.|..++   +..+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~-~~----~~~-----~~~~v~~~~gD~~d~~~~---~~~a   68 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI-AE----ELQ-----AIPNVTLFQGPLLNNVPL---MDTL   68 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH-HH----HHH-----TSTTEEEEESCCTTCHHH---HHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhh-hh----hhc-----ccCCCEEEEeeCCCcHHH---HHHH
Confidence            4578999999999999999999999999999999855432 11    111     234577888999886543   2222


Q ss_pred             HHhcCCccEEEeCC
Q 044851          119 VNAYDRIDILVNNA  132 (149)
Q Consensus       119 ~~~~g~id~li~~a  132 (149)
                         +...|.++.+.
T Consensus        69 ---~~~~~~~~~~~   79 (350)
T d1xgka_          69 ---FEGAHLAFINT   79 (350)
T ss_dssp             ---HTTCSEEEECC
T ss_pred             ---hcCCceEEeec
Confidence               23456666554

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.53  E-value=5.8e-08  Score=71.31  Aligned_cols=83  Identities=23%  Similarity=0.250  Sum_probs=56.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      |.+|||||+|.||..+++.|.+.|+.|.++.++..........+..+      ....+.++.+|+.|.+.+..++.    
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~------~~~~i~~~~~Di~d~~~~~~~~~----   72 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI------LGDRVELVVGDIADAELVDKLAA----   72 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG------CSSSEEEEECCTTCHHHHHHHHT----
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHh------hcCCeEEEEccCCCHHHHHHHHh----
Confidence            46999999999999999999999988655544311110000000000      24567889999999887766643    


Q ss_pred             hcCCccEEEeCCcCCC
Q 044851          121 AYDRIDILVNNAAEQY  136 (149)
Q Consensus       121 ~~g~id~li~~ag~~~  136 (149)
                         ..+.+++.|+...
T Consensus        73 ---~~~~v~~~a~~~~   85 (346)
T d1oc2a_          73 ---KADAIVHYAAESH   85 (346)
T ss_dssp             ---TCSEEEECCSCCC
T ss_pred             ---hhhhhhhhhhccc
Confidence               4688899988754

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=98.53  E-value=5.3e-08  Score=69.32  Aligned_cols=65  Identities=22%  Similarity=0.299  Sum_probs=51.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHHh
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVNA  121 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  121 (149)
                      .+|||||+|.||.++++.|.+.|. ++.++++..                        .+..|+++.+.+.+++...   
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~------------------------~~~~Dl~~~~~~~~~i~~~---   53 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSK------------------------EFCGDFSNPKGVAETVRKL---   53 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCS------------------------SSCCCTTCHHHHHHHHHHH---
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCc------------------------cccCcCCCHHHHHHHHHHc---
Confidence            499999999999999999999885 555554311                        0236999999888888766   


Q ss_pred             cCCccEEEeCCcCCC
Q 044851          122 YDRIDILVNNAAEQY  136 (149)
Q Consensus       122 ~g~id~li~~ag~~~  136 (149)
                        ++|+|||+||...
T Consensus        54 --~~D~Vih~Aa~~~   66 (298)
T d1n2sa_          54 --RPDVIVNAAAHTA   66 (298)
T ss_dssp             --CCSEEEECCCCCC
T ss_pred             --CCCEEEEeccccc
Confidence              6899999999764

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.48  E-value=6.5e-07  Score=65.32  Aligned_cols=89  Identities=17%  Similarity=0.136  Sum_probs=59.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      +.|++|||||+|.||..+++.|.+.|+.|+.+++..............+....  ....+.++.+|+.|.......    
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~d~~~~~~~----   88 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK--QWSNFKFIQGDIRNLDDCNNA----   88 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHH--HHTTEEEEECCTTSHHHHHHH----
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhc--ccCCeeEEeeccccccccccc----
Confidence            45789999999999999999999999999999875332322222222221100  124577888999887654322    


Q ss_pred             HHhcCCccEEEeCCcCCC
Q 044851          119 VNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~  136 (149)
                         ....+.+++.++...
T Consensus        89 ---~~~~~~v~~~~a~~~  103 (341)
T d1sb8a_          89 ---CAGVDYVLHQAALGS  103 (341)
T ss_dssp             ---HTTCSEEEECCSCCC
T ss_pred             ---ccccccccccccccc
Confidence               125688888887643

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=98.39  E-value=5.1e-07  Score=65.01  Aligned_cols=65  Identities=18%  Similarity=0.166  Sum_probs=51.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      .|.+|||||+|.||.+++++|++.|+.|+++...                    .       .+|+.+.+.+..++... 
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~--------------------~-------~~~~~~~~~~~~~~~~~-   53 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR--------------------D-------ELNLLDSRAVHDFFASE-   53 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT--------------------T-------TCCTTCHHHHHHHHHHH-
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCc--------------------h-------hccccCHHHHHHHHhhc-
Confidence            3579999999999999999999999888766432                    0       15888888888777653 


Q ss_pred             HhcCCccEEEeCCcCCC
Q 044851          120 NAYDRIDILVNNAAEQY  136 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~  136 (149)
                          .+|.++|+++...
T Consensus        54 ----~~d~v~~~a~~~~   66 (315)
T d1e6ua_          54 ----RIDQVYLAAAKVG   66 (315)
T ss_dssp             ----CCSEEEECCCCCC
T ss_pred             ----CCCEEEEcchhcc
Confidence                6899999987643

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=6.2e-07  Score=64.94  Aligned_cols=33  Identities=21%  Similarity=0.260  Sum_probs=30.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      |.+|||||+|.||..+++.|++.|++|+++++.
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~   34 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNF   34 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence            679999999999999999999999999998764

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.23  E-value=3.9e-05  Score=51.25  Aligned_cols=85  Identities=19%  Similarity=0.210  Sum_probs=62.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      .+++|.++|.|+ ||.+++++..|.+.|+. ++++.|+......+....+.+..     .........|+.+.+.+...+
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~   88 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE-----NTDCVVTVTDLADQQAFAEAL   88 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHH-----HSSCEEEEEETTCHHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHh-----hcCcceEeeecccccchhhhh
Confidence            468899999998 68899999999999986 88889987666666666655554     122345567888876554433


Q ss_pred             HHHHHhcCCccEEEeCCcC
Q 044851          116 DEVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~  134 (149)
                      .       ..|++||+...
T Consensus        89 ~-------~~diiIN~Tp~  100 (182)
T d1vi2a1          89 A-------SADILTNGTKV  100 (182)
T ss_dssp             H-------TCSEEEECSST
T ss_pred             c-------ccceeccccCC
Confidence            2       57999999865

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.15  E-value=2.7e-06  Score=57.93  Aligned_cols=34  Identities=18%  Similarity=0.108  Sum_probs=29.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC--cEEEEecC
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVK   73 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~   73 (149)
                      .|.+|||||+|.||.+++++|.+.|.  .|++..|+
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~   37 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARK   37 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCC
Confidence            37899999999999999999999997  46665654

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.12  E-value=3.3e-06  Score=56.09  Aligned_cols=44  Identities=16%  Similarity=0.305  Sum_probs=35.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHH
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLR   88 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~   88 (149)
                      ++.|+||++++|.++|+.|++.|++|++++|+   .+++++..+++.
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~---~e~~~~l~~~i~   45 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR---EEKAEAKAAEYR   45 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS---HHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHH
Confidence            36788888999999999999999999999997   344555555554

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=97.98  E-value=4e-06  Score=60.56  Aligned_cols=81  Identities=19%  Similarity=0.099  Sum_probs=52.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcE------EEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATV------AFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~V------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      .+|||||+|.||..+++.|++.|+.|      +.++........  ..+....     ....+.++..|..+....... 
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~--~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~-   73 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR--ANLAPVD-----ADPRLRFVHGDIRDAGLLARE-   73 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG--GGGGGGT-----TCTTEEEEECCTTCHHHHHHH-
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH--hHhhhhh-----cCCCeEEEEeccccchhhhcc-
Confidence            48999999999999999999999754      333322111100  0011010     245678899999987754432 


Q ss_pred             HHHHHhcCCccEEEeCCcCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~  136 (149)
                            ....|.++|+|+...
T Consensus        74 ------~~~~d~vi~~a~~~~   88 (322)
T d1r6da_          74 ------LRGVDAIVHFAAESH   88 (322)
T ss_dssp             ------TTTCCEEEECCSCCC
T ss_pred             ------ccccceEEeeccccc
Confidence                  236899999998754

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=6.2e-05  Score=49.65  Aligned_cols=80  Identities=19%  Similarity=0.227  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .|.+++|+|+++++|...++.....|++|+++.++   .+.. +..++       .+.. .+  .|..+.+-.+.+.+..
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~---~~~~-~~~~~-------~Ga~-~v--i~~~~~~~~~~i~~~t   93 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGT---EEGQ-KIVLQ-------NGAH-EV--FNHREVNYIDKIKKYV   93 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS---HHHH-HHHHH-------TTCS-EE--EETTSTTHHHHHHHHH
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccc---cccc-ccccc-------cCcc-cc--cccccccHHHHhhhhh
Confidence            57789999999999999999888889999988875   2222 22221       2322 12  3666654333333322


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                       . ...+|++|.++|-
T Consensus        94 -~-~~g~d~v~d~~g~  107 (174)
T d1yb5a2          94 -G-EKGIDIIIEMLAN  107 (174)
T ss_dssp             -C-TTCEEEEEESCHH
T ss_pred             -c-cCCceEEeecccH
Confidence             1 1258999988873

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.83  E-value=5.5e-05  Score=50.30  Aligned_cols=80  Identities=18%  Similarity=0.188  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .|.+++|+|+++++|...++-....|++|+.+.++   .++. +..   +.    .+.. ++  +|..+.+..+.+.+..
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~---~~~~-~~~---~~----~Ga~-~v--i~~~~~~~~~~~~~~~   94 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGS---DEKI-AYL---KQ----IGFD-AA--FNYKTVNSLEEALKKA   94 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS---HHHH-HHH---HH----TTCS-EE--EETTSCSCHHHHHHHH
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCC---HHHH-HHH---Hh----hhhh-hh--cccccccHHHHHHHHh
Confidence            58899999999999999999888899999999875   2221 222   22    2322 22  3444444444433332


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                        ....+|++|.+.|.
T Consensus        95 --~~~Gvd~v~D~vG~  108 (182)
T d1v3va2          95 --SPDGYDCYFDNVGG  108 (182)
T ss_dssp             --CTTCEEEEEESSCH
T ss_pred             --hcCCCceeEEecCc
Confidence              22359999999873

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.78  E-value=7.6e-05  Score=48.89  Aligned_cols=82  Identities=18%  Similarity=0.211  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .|.+++|+| .+++|...++.+...|++|++++++   ..++ +..++       .+... .+..|-. .++.....+.+
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~---~~r~-~~a~~-------~ga~~-~~~~~~~-~~~~~~~~~~~   91 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARS---PRRL-EVAKN-------CGADV-TLVVDPA-KEEESSIIERI   91 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESC---HHHH-HHHHH-------TTCSE-EEECCTT-TSCHHHHHHHH
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchH---HHHH-HHHHH-------cCCcE-EEecccc-ccccchhhhhh
Confidence            456799997 5899999999998999999999986   2222 22222       22222 2222222 23344555566


Q ss_pred             HHhcC-CccEEEeCCcC
Q 044851          119 VNAYD-RIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g-~id~li~~ag~  134 (149)
                      .+..+ .+|++|.++|.
T Consensus        92 ~~~~g~g~D~vid~~g~  108 (170)
T d1e3ja2          92 RSAIGDLPNVTIDCSGN  108 (170)
T ss_dssp             HHHSSSCCSEEEECSCC
T ss_pred             hcccccCCceeeecCCC
Confidence            55544 58999988875

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.67  E-value=0.00016  Score=47.79  Aligned_cols=78  Identities=22%  Similarity=0.239  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .|.+++|+||++++|...++.....|+.|+++.++   .++. +.+   ..    .+.. ++  .|..+++-    .+++
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~---~~~~-~~l---~~----~Ga~-~v--i~~~~~~~----~~~v   86 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGS---DAKR-EML---SR----LGVE-YV--GDSRSVDF----ADEI   86 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESS---HHHH-HHH---HT----TCCS-EE--EETTCSTH----HHHH
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecc---cccc-ccc---cc----cccc-cc--ccCCccCH----HHHH
Confidence            46789999999999999999888889999988875   2222 222   22    2322 22  35555432    2333


Q ss_pred             HHhc--CCccEEEeCCcC
Q 044851          119 VNAY--DRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~--g~id~li~~ag~  134 (149)
                      .+..  ..+|++|.++|.
T Consensus        87 ~~~t~~~g~d~v~d~~g~  104 (183)
T d1pqwa_          87 LELTDGYGVDVVLNSLAG  104 (183)
T ss_dssp             HHHTTTCCEEEEEECCCT
T ss_pred             HHHhCCCCEEEEEecccc
Confidence            3322  259999999983

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.66  E-value=0.00021  Score=47.67  Aligned_cols=86  Identities=13%  Similarity=0.136  Sum_probs=50.8

Q ss_pred             CCEEEE-ecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           40 GMVALV-TGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        40 ~~~~li-tG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      |..++| +||++++|...++-....|++|+++.++....++..+.++++       +.. +++.-|-.+..++...+.++
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~l-------Gad-~vi~~~~~~~~~~~~~v~~~  100 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL-------GAT-QVITEDQNNSREFGPTIKEW  100 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH-------TCS-EEEEHHHHHCGGGHHHHHHH
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhc-------ccc-EEEeccccchhHHHHHHHHH
Confidence            444454 689999999988877778999998887755444444444333       222 22222211222333444444


Q ss_pred             HH-hcCCccEEEeCCc
Q 044851          119 VN-AYDRIDILVNNAA  133 (149)
Q Consensus       119 ~~-~~g~id~li~~ag  133 (149)
                      .. ..+.+|++|.+.|
T Consensus       101 ~~~~g~~vdvv~D~vg  116 (189)
T d1gu7a2         101 IKQSGGEAKLALNCVG  116 (189)
T ss_dssp             HHHHTCCEEEEEESSC
T ss_pred             HhhccCCceEEEECCC
Confidence            33 3346899998876

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.62  E-value=0.0002  Score=46.72  Aligned_cols=74  Identities=22%  Similarity=0.274  Sum_probs=49.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      .+.++.++|.|+ |.+|..+++.|...|+. +.++.|+   .+.+.+..+++.         ..+.  +   .+++...+
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt---~~ka~~l~~~~~---------~~~~--~---~~~~~~~l   82 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRT---YERAVELARDLG---------GEAV--R---FDELVDHL   82 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSS---HHHHHHHHHHHT---------CEEC--C---GGGHHHHH
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCc---HHHHHHHHHhhh---------cccc--c---chhHHHHh
Confidence            367889999998 99999999999999986 7788876   444444443321         1111  2   22333322


Q ss_pred             HHHHHhcCCccEEEeCCcCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~  135 (149)
                             ...|++|++.+..
T Consensus        83 -------~~~Divi~atss~   95 (159)
T d1gpja2          83 -------ARSDVVVSATAAP   95 (159)
T ss_dssp             -------HTCSEEEECCSSS
T ss_pred             -------ccCCEEEEecCCC
Confidence                   2579999998754

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.60  E-value=0.00014  Score=47.97  Aligned_cols=80  Identities=13%  Similarity=0.167  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .|.+++|+|+++++|...++-....|++|++++++   .++. +.++++       +.. ++  +|..+++-.+.+ .++
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s---~~k~-~~~~~l-------Ga~-~v--i~~~~~d~~~~v-~~~   92 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGT---AQKA-QSALKA-------GAW-QV--INYREEDLVERL-KEI   92 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESS---HHHH-HHHHHH-------TCS-EE--EETTTSCHHHHH-HHH
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccc---hHHH-HHHHhc-------CCe-EE--EECCCCCHHHHH-HHH
Confidence            46799999999999999999888889999999886   2222 222222       222 22  466665433332 222


Q ss_pred             HHhcCCccEEEeCCcC
Q 044851          119 VNAYDRIDILVNNAAE  134 (149)
Q Consensus       119 ~~~~g~id~li~~ag~  134 (149)
                      - ....+|+++.++|.
T Consensus        93 t-~g~g~d~v~d~~g~  107 (179)
T d1qora2          93 T-GGKKVRVVYDSVGR  107 (179)
T ss_dssp             T-TTCCEEEEEECSCG
T ss_pred             h-CCCCeEEEEeCccH
Confidence            1 12358999988874

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.59  E-value=7.7e-05  Score=42.93  Aligned_cols=38  Identities=18%  Similarity=0.249  Sum_probs=32.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQE   76 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~   76 (149)
                      ++..++|+|+++|+|....+-+...|++|+.+.+++.+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k   68 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHH
Confidence            56789999999999999999888889999998887443

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=97.57  E-value=0.0001  Score=51.76  Aligned_cols=30  Identities=27%  Similarity=0.439  Sum_probs=26.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCc-EEEEec
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGAT-VAFTYV   72 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~-Vi~~~~   72 (149)
                      +|||||+|.||..++++|+++|.. |+++++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~   32 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN   32 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEEC
Confidence            799999999999999999999974 777753

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.55  E-value=0.00051  Score=45.36  Aligned_cols=34  Identities=18%  Similarity=0.146  Sum_probs=29.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      .|.+++|+|+ +++|...++.....|+ +|++++++
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~   62 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGS   62 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESC
T ss_pred             CCCEEEEECC-Cccchhheecccccccccccccccc
Confidence            5788999987 8999999999999998 58899886

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.54  E-value=0.00028  Score=45.90  Aligned_cols=33  Identities=15%  Similarity=0.213  Sum_probs=30.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .|.++|.|+ |.+|..+|+.|.+.|++|++++|+
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~   34 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRT   34 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECC
Confidence            578999887 899999999999999999999997

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.52  E-value=0.00017  Score=47.42  Aligned_cols=37  Identities=22%  Similarity=0.302  Sum_probs=32.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      .|++++|+|+++++|...++.....|++|+.+.+++.
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~   63 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPE   63 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccc
Confidence            5788999999999999999988888999998887643

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.51  E-value=0.00043  Score=45.44  Aligned_cols=36  Identities=22%  Similarity=0.242  Sum_probs=32.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+++|.++|.|+ ||-+++++..|.+.|++|.++.|+
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt   50 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRT   50 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccch
Confidence            467899999987 778999999999999999899887

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.43  E-value=0.0003  Score=44.16  Aligned_cols=31  Identities=10%  Similarity=0.375  Sum_probs=28.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++|.|+ |.+|+.+++.|.+.|+.|++++.+
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d   32 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDID   32 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCC
Confidence            4788887 899999999999999999999986

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.38  E-value=0.00042  Score=43.41  Aligned_cols=32  Identities=16%  Similarity=0.146  Sum_probs=28.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      |.++|.|+ |.+|+.+++.|.+.|..|++++.+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d   32 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDIN   32 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCc
Confidence            45788876 789999999999999999999986

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.36  E-value=0.0013  Score=45.15  Aligned_cols=80  Identities=18%  Similarity=0.158  Sum_probs=52.8

Q ss_pred             CCCCCEEEEecC----------------CChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceE
Q 044851           37 KLRGMVALVTGG----------------DSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMA  100 (149)
Q Consensus        37 ~~~~~~~litG~----------------s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (149)
                      .++|+.+|||+|                ||-.|.++|+.+...|+.|.++.......                ....+..
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~----------------~p~~~~~   66 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP----------------TPPFVKR   66 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC----------------CCTTEEE
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC----------------ccccccc
Confidence            478888888864                35589999999999999998876542111                1112222


Q ss_pred             EEecCCChHHHHHHHHHHHHhcCCccEEEeCCcCCCC
Q 044851          101 ISADLGFDENCKRVVDEVVNAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       101 ~~~Dv~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~  137 (149)
                        ..+...++...   .+.+.+...|++|.+|++...
T Consensus        67 --~~~~t~~~m~~---~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          67 --VDVMTALEMEA---AVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             --EECCSHHHHHH---HHHHHGGGCSEEEECCBCCSE
T ss_pred             --ceehhhHHHHH---HHHhhhccceeEeeeechhhh
Confidence              34444444444   444444567999999998764

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=0.0023  Score=41.59  Aligned_cols=80  Identities=15%  Similarity=0.178  Sum_probs=48.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .+.+++|.|+ +++|...+..+...|+ +|++++++   ...++ ..++       .+.. +++..+-.+...   ..+.
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~---~~rl~-~a~~-------~Ga~-~~~~~~~~~~~~---~~~~   89 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLS---ATRLS-KAKE-------IGAD-LVLQISKESPQE---IARK   89 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESC---HHHHH-HHHH-------TTCS-EEEECSSCCHHH---HHHH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCC---HHHHH-HHHH-------hCCc-cccccccccccc---cccc
Confidence            4567999986 9999999999999999 58888886   22222 2222       2322 222223333333   3333


Q ss_pred             HHHhcC-CccEEEeCCcC
Q 044851          118 VVNAYD-RIDILVNNAAE  134 (149)
Q Consensus       118 ~~~~~g-~id~li~~ag~  134 (149)
                      +....+ .+|++|.++|.
T Consensus        90 ~~~~~g~g~Dvvid~~G~  107 (171)
T d1pl8a2          90 VEGQLGCKPEVTIECTGA  107 (171)
T ss_dssp             HHHHHTSCCSEEEECSCC
T ss_pred             ccccCCCCceEEEeccCC
Confidence            333333 58899988885

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.27  E-value=0.0011  Score=43.61  Aligned_cols=76  Identities=17%  Similarity=0.173  Sum_probs=49.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .+++|.++|.|+ ||-+++++..|.+.+.+|+++.|+   .+.++...+.+..     ...+.....|..          
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~---~~~a~~l~~~~~~-----~~~~~~~~~~~~----------   75 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRT---FSKTKELAERFQP-----YGNIQAVSMDSI----------   75 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESS---HHHHHHHHHHHGG-----GSCEEEEEGGGC----------
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccch---HHHHHHHHHHHhh-----ccccchhhhccc----------
Confidence            467889999876 677999999999888789999997   3444444444432     222333332211          


Q ss_pred             HHHHhcCCccEEEeCCcCC
Q 044851          117 EVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~  135 (149)
                          .....|++||+....
T Consensus        76 ----~~~~~diiIN~tp~g   90 (171)
T d1p77a1          76 ----PLQTYDLVINATSAG   90 (171)
T ss_dssp             ----CCSCCSEEEECCCC-
T ss_pred             ----cccccceeeeccccc
Confidence                124689999998664

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.10  E-value=0.0016  Score=42.31  Aligned_cols=80  Identities=13%  Similarity=0.165  Sum_probs=49.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .+.+++|.|+++++|...+..+...|+ .|++++++.   .. .+..+++       +.. .+  .|..+.+..+.+.+.
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~---~~-~~~~~~~-------Ga~-~~--i~~~~~~~~~~~~~~   92 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVRE---EA-VEAAKRA-------GAD-YV--INASMQDPLAEIRRI   92 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSH---HH-HHHHHHH-------TCS-EE--EETTTSCHHHHHHHH
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccch---hh-HHHHHHc-------CCc-ee--eccCCcCHHHHHHHH
Confidence            467899999999999999999998886 588888752   22 2222222       222 22  344444433333322


Q ss_pred             HHHhcCCccEEEeCCcC
Q 044851          118 VVNAYDRIDILVNNAAE  134 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~  134 (149)
                      .  ..+.+|++|.++|.
T Consensus        93 ~--~~~~~d~vid~~g~  107 (170)
T d1jvba2          93 T--ESKGVDAVIDLNNS  107 (170)
T ss_dssp             T--TTSCEEEEEESCCC
T ss_pred             h--hcccchhhhccccc
Confidence            2  11358999999885

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.09  E-value=0.00052  Score=45.04  Aligned_cols=41  Identities=20%  Similarity=0.248  Sum_probs=34.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKD   79 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~   79 (149)
                      .+.++||+||++|+|...++--...|++|+.+.++..+.+.
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~   63 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADY   63 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHH
Confidence            46679999999999999888777789999999987554433

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.03  E-value=0.0011  Score=44.06  Aligned_cols=79  Identities=10%  Similarity=0.083  Sum_probs=47.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +.++||+||++|+|...++-....|+.+++...+  ..+.......+       .+..   ...|..+.+ ..+.+.++.
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~--~~e~~~~l~~~-------~gad---~vi~~~~~~-~~~~~~~~~   97 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICG--TQEKCLFLTSE-------LGFD---AAVNYKTGN-VAEQLREAC   97 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEES--SHHHHHHHHHH-------SCCS---EEEETTSSC-HHHHHHHHC
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccc--hHHHHhhhhhc-------ccce---EEeeccchh-HHHHHHHHh
Confidence            4789999999999999888887789986554332  12222222221       2222   223665543 333344432


Q ss_pred             HhcCCccEEEeCCc
Q 044851          120 NAYDRIDILVNNAA  133 (149)
Q Consensus       120 ~~~g~id~li~~ag  133 (149)
                      .  ..+|++|.+.|
T Consensus        98 ~--~GvDvv~D~vG  109 (187)
T d1vj1a2          98 P--GGVDVYFDNVG  109 (187)
T ss_dssp             T--TCEEEEEESSC
T ss_pred             c--cCceEEEecCC
Confidence            2  25899998887

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.95  E-value=0.0026  Score=38.62  Aligned_cols=37  Identities=19%  Similarity=0.349  Sum_probs=32.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      .++||+++|.|++. +|...++.|.+.|+.|+++....
T Consensus         9 ~l~~k~vlVvG~G~-va~~ka~~ll~~ga~v~v~~~~~   45 (113)
T d1pjqa1           9 QLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNALTF   45 (113)
T ss_dssp             CCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEESSC
T ss_pred             EeCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeccC
Confidence            57899999998754 99999999999999999887753

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.92  E-value=0.0015  Score=42.94  Aligned_cols=34  Identities=18%  Similarity=0.095  Sum_probs=28.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      .|.+++|.|+ +++|...++.....|+ +|++++++
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~   61 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSR   61 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCC
T ss_pred             CCCEEEEEcC-Ccchhhhhhhhhcccccccccccch
Confidence            4567899986 8999999999888898 58888876

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.90  E-value=0.00084  Score=44.42  Aligned_cols=38  Identities=18%  Similarity=0.249  Sum_probs=32.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQE   76 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~   76 (149)
                      .+.++||+||++|+|...++-....|++|+.+.+++..
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k   68 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhH
Confidence            44589999999999999888888889999999887443

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.90  E-value=0.00085  Score=44.38  Aligned_cols=40  Identities=30%  Similarity=0.344  Sum_probs=34.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCCh
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQED   77 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~   77 (149)
                      ..|.++||+|+++|+|...++-....|++|+.+.++..+.
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~   69 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEH   69 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCH
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHH
Confidence            3578899999999999998888888899999999875443

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.90  E-value=0.0023  Score=41.74  Aligned_cols=35  Identities=23%  Similarity=0.278  Sum_probs=29.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKP   74 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~   74 (149)
                      .|.+++|.|+ +|+|...+..+...|+ +|+++++++
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~   63 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINK   63 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcH
Confidence            5778999999 6899999999999986 588888763

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.88  E-value=0.006  Score=39.80  Aligned_cols=87  Identities=16%  Similarity=0.177  Sum_probs=54.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHH------------HHHHHhccCCCCCCceEEEecCCChHH
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKET------------LEMLREAKTPDAKDPMAISADLGFDEN  110 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~Dv~~~~~  110 (149)
                      +=|.|. +-+|..+|++|++.|++|++++|++...+++.+.            .+++..    .-.....+...+.+.+.
T Consensus         5 Ig~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~----~~~~~~~ii~~~~~~~~   79 (176)
T d2pgda2           5 IALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVS----KLKKPRRIILLVKAGQA   79 (176)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHH----HBCSSCEEEECSCTTHH
T ss_pred             EEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhh----hhcccceEEEecCchHH
Confidence            445554 7899999999999999999999975433322111            111111    01122344456667778


Q ss_pred             HHHHHHHHHHhcCCccEEEeCCcC
Q 044851          111 CKRVVDEVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       111 v~~~~~~~~~~~g~id~li~~ag~  134 (149)
                      +..++..+......=+++|.+...
T Consensus        80 v~~v~~~l~~~~~~g~iiid~sT~  103 (176)
T d2pgda2          80 VDNFIEKLVPLLDIGDIIIDGGNS  103 (176)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECSCC
T ss_pred             HHHHHHHHHhccccCcEEEecCcc
Confidence            888888887766555677766544

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.87  E-value=0.0044  Score=40.40  Aligned_cols=78  Identities=9%  Similarity=0.111  Sum_probs=46.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEE-EEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVA-FTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .|.+++|.|+ +++|...+..+...|+.++ +++++   ..++ +..+++       +. ..+  .|..+.+ +.+.+.+
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~---~~k~-~~a~~~-------Ga-~~~--i~~~~~~-~~~~i~~   91 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIV---ESRL-ELAKQL-------GA-THV--INSKTQD-PVAAIKE   91 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESC---HHHH-HHHHHH-------TC-SEE--EETTTSC-HHHHHHH
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccH---HHHH-HHHHHc-------CC-eEE--EeCCCcC-HHHHHHH
Confidence            4678999987 8999999998888898855 55554   2222 222222       21 122  3554433 3333333


Q ss_pred             HHHhcCCccEEEeCCcC
Q 044851          118 VVNAYDRIDILVNNAAE  134 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~  134 (149)
                      +.  .+.+|++|.++|.
T Consensus        92 ~t--~gg~D~vid~~G~  106 (174)
T d1f8fa2          92 IT--DGGVNFALESTGS  106 (174)
T ss_dssp             HT--TSCEEEEEECSCC
T ss_pred             Hc--CCCCcEEEEcCCc
Confidence            32  2369999999885

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.85  E-value=0.0072  Score=38.29  Aligned_cols=35  Identities=11%  Similarity=0.207  Sum_probs=32.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      +++.|.|+.|-+|.++|+.|.+.|++|.+++++..
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~   44 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDW   44 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccc
Confidence            46999999999999999999999999999999754

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.83  E-value=0.0027  Score=41.70  Aligned_cols=36  Identities=22%  Similarity=0.270  Sum_probs=30.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQ   75 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~   75 (149)
                      .|.+++|.|+ +|+|...+..+...|+ +|++++.+..
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~   65 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKD   65 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGG
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHH
Confidence            5778999986 8999999999999996 5999998743

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.80  E-value=0.0036  Score=39.86  Aligned_cols=58  Identities=21%  Similarity=0.163  Sum_probs=40.4

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHH
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDEN  110 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~  110 (149)
                      ++|.|. +.+|..+++.|.+.|..|+++..++.   ......++..      ...+.++..|.++++.
T Consensus         6 iII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~---~~~~~~~~~~------~~~~~vi~Gd~~d~~~   63 (153)
T d1id1a_           6 FIVCGH-SILAINTILQLNQRGQNVTVISNLPE---DDIKQLEQRL------GDNADVIPGDSNDSSV   63 (153)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEECCCH---HHHHHHHHHH------CTTCEEEESCTTSHHH
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCEEEEeccch---hHHHHHHHhh------cCCcEEEEccCcchHH
Confidence            777777 68999999999999999999987632   2222222222      2346677788887653

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.78  E-value=0.0043  Score=40.11  Aligned_cols=75  Identities=19%  Similarity=0.187  Sum_probs=47.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .|.+++|.|+ +++|...++.....|+++++++++..+.    +..+++       +.. .+  +|..+.+..       
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~----~~a~~l-------Gad-~~--i~~~~~~~~-------   87 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKR----EAAKAL-------GAD-EV--VNSRNADEM-------   87 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGH----HHHHHH-------TCS-EE--EETTCHHHH-------
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHH----HHHhcc-------CCc-EE--EECchhhHH-------
Confidence            4678999986 8999999988888899988888763322    222222       222 12  355554322       


Q ss_pred             HHhcCCccEEEeCCcCC
Q 044851          119 VNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~  135 (149)
                      ......+|++|.++|..
T Consensus        88 ~~~~~~~D~vid~~g~~  104 (168)
T d1uufa2          88 AAHLKSFDFILNTVAAP  104 (168)
T ss_dssp             HTTTTCEEEEEECCSSC
T ss_pred             HHhcCCCceeeeeeecc
Confidence            12224689999888753

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.71  E-value=0.0015  Score=38.31  Aligned_cols=38  Identities=16%  Similarity=0.194  Sum_probs=32.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      .++||+++|.|. +.-|.++|+.|.+.|++|++++.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            368899999988 44699999999999999999998643

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.62  E-value=0.0029  Score=41.01  Aligned_cols=38  Identities=18%  Similarity=0.119  Sum_probs=31.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCCh
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQED   77 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~   77 (149)
                      .|.+++|.|+ +++|...++.+...|++|+++++++.+.
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~   64 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKR   64 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTH
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHH
Confidence            4678999987 8999998888778899999999875543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.58  E-value=0.007  Score=39.56  Aligned_cols=79  Identities=13%  Similarity=0.073  Sum_probs=48.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCCh-HHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFD-ENCKRVVD  116 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~  116 (149)
                      .|.+++|.|+ ++||...+..+...|+. |++++.++.+.    +..++       .+.. .+  .|.... +.+.....
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~----~~a~~-------~Ga~-~~--i~~~~~~~~~~~~~~   92 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKF----PKAKA-------LGAT-DC--LNPRELDKPVQDVIT   92 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH----HHHHH-------TTCS-EE--ECGGGCSSCHHHHHH
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHH----HHHHH-------hCCC-cc--cCCccchhhhhhhHh
Confidence            5678999975 99999999999999996 77778763322    22222       2222 22  232221 22333333


Q ss_pred             HHHHhcCCccEEEeCCcC
Q 044851          117 EVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~  134 (149)
                      ..  ..+.+|++|-++|.
T Consensus        93 ~~--~~~G~d~vie~~G~  108 (174)
T d1e3ia2          93 EL--TAGGVDYSLDCAGT  108 (174)
T ss_dssp             HH--HTSCBSEEEESSCC
T ss_pred             hh--hcCCCcEEEEeccc
Confidence            33  22469999999886

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.58  E-value=0.0064  Score=39.34  Aligned_cols=79  Identities=16%  Similarity=0.131  Sum_probs=46.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCC-hHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGF-DENCKRVVD  116 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~  116 (149)
                      .|.+++|.|+ +|+|...++.+...|+. |+++++++.+.    +..+++       +.. .+  .|..+ .+.+...+.
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~----~~ak~l-------Ga~-~~--i~~~~~~~~~~~~~~   92 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKF----ARAKEF-------GAT-EC--INPQDFSKPIQEVLI   92 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH----HHHHHH-------TCS-EE--ECGGGCSSCHHHHHH
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHH----HHHHHh-------CCc-EE--EeCCchhhHHHHHHH
Confidence            4678999998 58999999999989976 55666643222    223222       211 12  23322 233444444


Q ss_pred             HHHHhcCCccEEEeCCcC
Q 044851          117 EVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~  134 (149)
                      ...  .+.+|++|.++|.
T Consensus        93 ~~~--~~g~D~vid~~G~  108 (176)
T d2fzwa2          93 EMT--DGGVDYSFECIGN  108 (176)
T ss_dssp             HHT--TSCBSEEEECSCC
T ss_pred             HHc--CCCCcEeeecCCC
Confidence            332  2358999988875

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.53  E-value=0.0013  Score=42.03  Aligned_cols=36  Identities=17%  Similarity=0.289  Sum_probs=32.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++||++||.|| |.+|..-++.|++.|++|+++...
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            589999999999 559999999999999999988653

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.52  E-value=0.0039  Score=40.75  Aligned_cols=35  Identities=20%  Similarity=0.181  Sum_probs=29.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKP   74 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~   74 (149)
                      .|.+++|.|+ +++|...+..+...|+. |++++++.
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~   62 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHK   62 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCG
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChH
Confidence            5678999986 89999999999999975 88888863

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.48  E-value=0.024  Score=36.16  Aligned_cols=34  Identities=21%  Similarity=0.289  Sum_probs=29.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .|.+++|.|+ +++|...++.+...|++|++++++
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~   60 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDID   60 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecch
Confidence            4678999886 999999998888889999999886

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.31  E-value=0.0083  Score=38.81  Aligned_cols=79  Identities=14%  Similarity=0.156  Sum_probs=45.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHH-HHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDEN-CKRVVD  116 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~  116 (149)
                      .|.+++|.|+ +++|...+..+...|+. |+++++++.+.    +...+       .+.. ++  +|..+.+. +.....
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl----~~a~~-------~GAd-~~--in~~~~~~~~~~~~~   92 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKF----EKAKV-------FGAT-DF--VNPNDHSEPISQVLS   92 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH----HHHHH-------TTCC-EE--ECGGGCSSCHHHHHH
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHH----HHHHH-------cCCc-EE--EcCCCcchhHHHHHH
Confidence            5678999985 77888888888888775 77888763322    12221       2322 22  24333322 223222


Q ss_pred             HHHHhcCCccEEEeCCcC
Q 044851          117 EVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~  134 (149)
                      .. . .+.+|++|.++|.
T Consensus        93 ~~-~-~~G~d~vid~~G~  108 (175)
T d1cdoa2          93 KM-T-NGGVDFSLECVGN  108 (175)
T ss_dssp             HH-H-TSCBSEEEECSCC
T ss_pred             hh-c-cCCcceeeeecCC
Confidence            22 1 2368999999885

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.29  E-value=0.062  Score=34.47  Aligned_cols=81  Identities=12%  Similarity=0.125  Sum_probs=48.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC--cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +....+.|+|+ |.+|..+|..|...|.  .+++++++   ...++....++................|..         
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~---~~~a~g~alDl~~~~~~~~~~~~~~~~d~~---------   83 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDAD---TDKLRGEALDLQHGSLFLSTPKIVFGKDYN---------   83 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSC---HHHHHHHHHHHHHTTTTCSCCEEEEESSGG---------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCC---chhhhccHHHHhCcchhcCCCeEEeccchh---------
Confidence            34445777886 8899999999999974  48899886   333333333444311111222222223332         


Q ss_pred             HHHHHhcCCccEEEeCCcCCC
Q 044851          116 DEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~~~  136 (149)
                           ....-|++|..+|...
T Consensus        84 -----~~~~adivvitag~~~   99 (159)
T d2ldxa1          84 -----VSANSKLVIITAGARM   99 (159)
T ss_dssp             -----GGTTEEEEEECCSCCC
T ss_pred             -----hhccccEEEEeccccc
Confidence                 2235799999998744

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.18  E-value=0.011  Score=37.83  Aligned_cols=34  Identities=18%  Similarity=0.223  Sum_probs=28.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.+++|.|+ +++|...+..+...|++|++++++
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~   60 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIG   60 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCC
Confidence            4667888875 889999888888889999998876

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.17  E-value=0.0078  Score=40.06  Aligned_cols=79  Identities=13%  Similarity=0.051  Sum_probs=46.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .|.+++|.|+ +++|...+......|+. |++++.+   ...++ ..++       .+.  ..+ .|-.+. ++.+.+.+
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~---~~rl~-~a~~-------~Ga--~~~-~~~~~~-~~~~~i~~   88 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLN---PARLA-HAKA-------QGF--EIA-DLSLDT-PLHEQIAA   88 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESC---HHHHH-HHHH-------TTC--EEE-ETTSSS-CHHHHHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeeccc---chhhH-hhhh-------ccc--cEE-EeCCCc-CHHHHHHH
Confidence            4678999986 79998888888778875 7787775   22221 2211       232  111 233333 33333333


Q ss_pred             HHHhcCCccEEEeCCcC
Q 044851          118 VVNAYDRIDILVNNAAE  134 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~  134 (149)
                      +.. ...+|++|.+.|.
T Consensus        89 ~t~-g~g~D~vid~vG~  104 (195)
T d1kola2          89 LLG-EPEVDCAVDAVGF  104 (195)
T ss_dssp             HHS-SSCEEEEEECCCT
T ss_pred             HhC-CCCcEEEEECccc
Confidence            322 2358999999884

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=96.13  E-value=0.011  Score=37.57  Aligned_cols=79  Identities=16%  Similarity=0.201  Sum_probs=47.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC--CcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEG--ATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +++.+.|.|+ |.+|..+|..|+..|  ..|++++++.   ..++-...++..... ..........|.   +       
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~---~~~~g~a~Dl~~a~~-~~~~~~~~~~d~---~-------   68 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVK---DRTKGDALDLEDAQA-FTAPKKIYSGEY---S-------   68 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH---HHHHHHHHHHHGGGG-GSCCCEEEECCG---G-------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeeccc---chhHHHHHHHhcccc-ccCCceEeeccH---H-------
Confidence            3456888895 889999999999998  3599999863   223222223332111 122233343443   2       


Q ss_pred             HHHHhcCCccEEEeCCcCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~  136 (149)
                          ....-|++|.++|...
T Consensus        69 ----~~~~adivvitag~~~   84 (146)
T d1ez4a1          69 ----DCKDADLVVITAGAPQ   84 (146)
T ss_dssp             ----GGTTCSEEEECCCC--
T ss_pred             ----HhccccEEEEeccccc
Confidence                1235699999998744

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.13  E-value=0.025  Score=36.42  Aligned_cols=79  Identities=16%  Similarity=0.203  Sum_probs=45.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .|.+++|.|+ +++|...+..+...|+. |++++++   .+++ +..+   +    .+.. .+  .|..+ +.++...+.
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~---~~k~-~~~~---~----~ga~-~~--i~~~~-~~~~~~~~~   95 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVK---EEKL-KLAE---R----LGAD-HV--VDARR-DPVKQVMEL   95 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESS---HHHH-HHHH---H----TTCS-EE--EETTS-CHHHHHHHH
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccch---hHHH-HHHh---h----cccc-ee--ecCcc-cHHHHHHHh
Confidence            3678999886 99999999988888876 5666665   2222 2222   1    2222 22  24333 333333332


Q ss_pred             HHHhcCCccEEEeCCcCC
Q 044851          118 VVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~~  135 (149)
                      .  ....+|++|.++|..
T Consensus        96 ~--~~~g~d~vid~~g~~  111 (172)
T d1h2ba2          96 T--RGRGVNVAMDFVGSQ  111 (172)
T ss_dssp             T--TTCCEEEEEESSCCH
T ss_pred             h--CCCCceEEEEecCcc
Confidence            1  112589999999863

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.08  E-value=0.016  Score=37.66  Aligned_cols=36  Identities=17%  Similarity=0.334  Sum_probs=29.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      .+++|.++|.|+ ||.+++++..|.+.| +|.+..|+.
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~   50 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTV   50 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhh
Confidence            368899999976 578999999997666 888999973

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=95.83  E-value=0.0052  Score=39.90  Aligned_cols=34  Identities=21%  Similarity=0.402  Sum_probs=29.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~   73 (149)
                      +++.++|.|+ ||.+++++..|.+.|+ +|.++.|+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~   50 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARN   50 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeccc
Confidence            5677999987 8899999999999997 48888886

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.78  E-value=0.019  Score=36.71  Aligned_cols=85  Identities=12%  Similarity=0.067  Sum_probs=49.0

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHH--hccC----CCCCCceEEEecCCChHHHHHHHH
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLR--EAKT----PDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +.|.|. |-+|.++|+.|.+.|++|++++|+.   +.++...+.-.  ....    -....+.++.+   ....+.++++
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~---~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~   75 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQ---STCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLE   75 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCH---HHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHH
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCc---hHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhh
Confidence            556655 8899999999999999999999862   22222211100  0000    01122333222   2467888888


Q ss_pred             HHHHhcCCccEEEeCCcC
Q 044851          117 EVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~  134 (149)
                      ++.....+=.+++..++.
T Consensus        76 ~l~~~l~~~~iv~~~~s~   93 (165)
T d2f1ka2          76 KLIPHLSPTAIVTDVASV   93 (165)
T ss_dssp             HHGGGSCTTCEEEECCSC
T ss_pred             hhhhhcccccceeecccc
Confidence            886665544556655543

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.73  E-value=0.009  Score=39.69  Aligned_cols=35  Identities=23%  Similarity=0.271  Sum_probs=30.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQE   76 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~   76 (149)
                      |.+-|.|+ |-+|..+|..++..|+.|+++++++..
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~   39 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDI   39 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHH
Confidence            46888888 669999999999999999999998543

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=95.68  E-value=0.08  Score=33.37  Aligned_cols=32  Identities=22%  Similarity=0.306  Sum_probs=26.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--cEEEEecC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVK   73 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~   73 (149)
                      |.+.|+|+ |.+|..+|..|+.+|.  .+++++.+
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~   35 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDAN   35 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecc
Confidence            45778895 8899999999999883  48898886

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.67  E-value=0.0078  Score=38.97  Aligned_cols=32  Identities=22%  Similarity=0.146  Sum_probs=29.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      |++-|.|+ |.+|..+|..|.+.|++|.+++|+
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~   33 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDID   33 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECC
Confidence            57888887 889999999999999999999996

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.66  E-value=0.12  Score=32.52  Aligned_cols=80  Identities=15%  Similarity=0.161  Sum_probs=48.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC--cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      .++.+.|+|+ |.+|..+|..|+..|.  .++++++++   ..++-...++.....-......+...|.   +       
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~---~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~-------   70 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANE---SKAIGDAMDFNHGKVFAPKPVDIWHGDY---D-------   70 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH---HHHHHHHHHHHHHTTSSSSCCEEEECCG---G-------
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeecc---ccccchhccHhhCccccCCCeEEEECCH---H-------
Confidence            4556888896 8899999999999874  499999863   2233333334321111122333333333   2       


Q ss_pred             HHHHhcCCccEEEeCCcCCC
Q 044851          117 EVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~~~  136 (149)
                          ....-|++|.++|...
T Consensus        71 ----~l~daDvvvitag~~~   86 (148)
T d1ldna1          71 ----DCRDADLVVICAGANQ   86 (148)
T ss_dssp             ----GTTTCSEEEECCSCCC
T ss_pred             ----HhccceeEEEeccccc
Confidence                1235699999998754

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.50  E-value=0.013  Score=37.21  Aligned_cols=33  Identities=21%  Similarity=0.225  Sum_probs=29.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      .+.|.|+ |.+|..++..|++.|++|.++.|+..
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~   34 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQ   34 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHH
Confidence            4788888 99999999999999999999999864

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.27  E-value=0.11  Score=32.85  Aligned_cols=23  Identities=22%  Similarity=0.263  Sum_probs=20.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEG   64 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g   64 (149)
                      .+.|+||+|.+|+.++..|++.+
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~   27 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGS   27 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHHHH
Confidence            59999999999999999998764

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.20  E-value=0.019  Score=38.45  Aligned_cols=36  Identities=25%  Similarity=0.412  Sum_probs=32.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++||+++|.| -|.+|..+|+.|.+.|++|++.+.+
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d   59 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTD   59 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecch
Confidence            48999999987 5679999999999999999988875

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=95.17  E-value=0.21  Score=32.32  Aligned_cols=23  Identities=17%  Similarity=0.128  Sum_probs=21.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEG   64 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g   64 (149)
                      .+.|+||+|.||+.++..|++..
T Consensus        26 kV~I~GA~G~Ig~~l~~~La~g~   48 (175)
T d7mdha1          26 NIAVSGAAGMISNHLLFKLASGE   48 (175)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT
T ss_pred             EEEEECCCcHHHHHHHHHHHcCc
Confidence            59999999999999999999863

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.99  E-value=0.09  Score=33.32  Aligned_cols=88  Identities=13%  Similarity=0.156  Sum_probs=48.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCC---CCCCceEEEecCCChHHHHHHH---H
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTP---DAKDPMAISADLGFDENCKRVV---D  116 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~---~  116 (149)
                      +=|.| .+-+|..+|+.|++.|++|++++|++.   ..++..+........   ......++.+=+.+.+.++.++   .
T Consensus         3 IgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~---~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~   78 (161)
T d1vpda2           3 VGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPE---AIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGEN   78 (161)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHH---HHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTT
T ss_pred             EEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcc---hhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCc
Confidence            33444 478999999999999999999998732   222221100000000   0011234445566777777776   3


Q ss_pred             HHHHhcCCccEEEeCCcC
Q 044851          117 EVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       117 ~~~~~~g~id~li~~ag~  134 (149)
                      .+.....+=+++|.+...
T Consensus        79 ~~~~~~~~g~iiid~sT~   96 (161)
T d1vpda2          79 GIIEGAKPGTVLIDMSSI   96 (161)
T ss_dssp             CHHHHCCTTCEEEECSCC
T ss_pred             chhhccCCCCEEEECCCC
Confidence            344444444566665543

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.90  E-value=0.049  Score=35.25  Aligned_cols=38  Identities=24%  Similarity=0.273  Sum_probs=34.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      .+.||.++|.|.|.-+|+.++..|.++|++|.++....
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t   71 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT   71 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhcccccccccc
Confidence            47899999999999999999999999999999887653

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.85  E-value=0.047  Score=35.50  Aligned_cols=38  Identities=24%  Similarity=0.248  Sum_probs=35.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      .++||.++|.|.|.=+|+.++..|.++|+.|.++....
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t   73 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT   73 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEeccc
Confidence            57999999999999999999999999999999988763

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=94.84  E-value=0.25  Score=31.51  Aligned_cols=35  Identities=17%  Similarity=0.136  Sum_probs=28.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC--cEEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~   73 (149)
                      ...+.+-|.|+ |.+|..+|..|+..|.  .+++++.+
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~   54 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVL   54 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEec
Confidence            33456888896 8899999999999985  48899986

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.80  E-value=0.032  Score=36.39  Aligned_cols=38  Identities=32%  Similarity=0.420  Sum_probs=34.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      ..++||.++|.|.|.=+|+.++..|.++|+.|..+..+
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            36899999999999999999999999999999887654

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=94.77  E-value=0.16  Score=32.16  Aligned_cols=36  Identities=19%  Similarity=0.093  Sum_probs=29.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQ   75 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~   75 (149)
                      +.+.+.|.|+ |.+|..+|..|...+. .+++++.++.
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~   42 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKG   42 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccc
Confidence            4456888897 8999999999988884 6889988753

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.72  E-value=0.11  Score=32.58  Aligned_cols=32  Identities=16%  Similarity=0.297  Sum_probs=27.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-c-EEEEecC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGA-T-VAFTYVK   73 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~-~-Vi~~~~~   73 (149)
                      .+.|+||+|.+|..+|..|...|. + +++++.+
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~   35 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIA   35 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEecc
Confidence            478999999999999999999885 3 8888875

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.71  E-value=0.03  Score=36.19  Aligned_cols=37  Identities=30%  Similarity=0.500  Sum_probs=33.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      .+.||+++|.|.. .||+.+|+.+...|++|+++..++
T Consensus        21 ~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~V~v~e~dp   57 (163)
T d1li4a1          21 MIAGKVAVVAGYG-DVGKGCAQALRGFGARVIITEIDP   57 (163)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             eecCCEEEEeccc-cccHHHHHHHHhCCCeeEeeeccc
Confidence            4789999999865 799999999999999999999873

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.71  E-value=0.14  Score=31.49  Aligned_cols=75  Identities=17%  Similarity=0.271  Sum_probs=54.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEE-EecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAF-TYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      .+.|.|++|-.|+.+++.+.+.|+.++. ++.+.  ...+             ....   +..|++.++.+.+.++...+
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~--~~~~-------------~~~D---VvIDFS~p~~~~~~l~~~~~   63 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG--VEEL-------------DSPD---VVIDFSSPEALPKTVDLCKK   63 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE--EEEC-------------SCCS---EEEECSCGGGHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCc--HHHh-------------ccCC---EEEEecCHHHHHHHHHHHHh
Confidence            4889999999999999988888988653 34321  1100             1122   44799999999999998877


Q ss_pred             hcCCccEEEeCCcCCC
Q 044851          121 AYDRIDILVNNAAEQY  136 (149)
Q Consensus       121 ~~g~id~li~~ag~~~  136 (149)
                      .  ++-+|+-..|+..
T Consensus        64 ~--~~p~ViGTTG~~~   77 (128)
T d1vm6a3          64 Y--RAGLVLGTTALKE   77 (128)
T ss_dssp             H--TCEEEECCCSCCH
T ss_pred             c--CCCEEEEcCCCCH
Confidence            6  4678888888754

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.62  E-value=0.074  Score=37.45  Aligned_cols=24  Identities=25%  Similarity=0.365  Sum_probs=21.1

Q ss_pred             ChHHHHHHHHHHHcCCcEEEEecC
Q 044851           50 SGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        50 ~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      |-.|.++|+.+...|+.|+++.+.
T Consensus        46 Gk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          46 GRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             hHHHHHHHHHHHHcCCEEEEEecC
Confidence            458999999999999999988654

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.55  E-value=0.27  Score=30.70  Aligned_cols=32  Identities=16%  Similarity=0.207  Sum_probs=28.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--cEEEEecC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVK   73 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~   73 (149)
                      .+.|+|++|.+|..+|..|+..|.  .+++++++
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~   35 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGRE   35 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccch
Confidence            388999999999999999999983  58899886

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=94.49  E-value=0.044  Score=35.90  Aligned_cols=33  Identities=18%  Similarity=0.265  Sum_probs=28.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      .+-|.|+ |-+|..+|..++..|+.|++.++++.
T Consensus         6 ~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~   38 (186)
T d1wdka3           6 QAAVLGA-GIMGGGIAYQSASKGTPILMKDINEH   38 (186)
T ss_dssp             SEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHH
Confidence            4778887 66999999999999999999999744

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.41  E-value=0.023  Score=34.83  Aligned_cols=54  Identities=11%  Similarity=0.006  Sum_probs=34.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDEN  110 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~  110 (149)
                      |.++|.|. +.+|..+++.|.  |..|+++..++...+   .    +..      ..+.++.+|.++++.
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~---~----~~~------~~~~~i~Gd~~~~~~   54 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRK---K----VLR------SGANFVHGDPTRVSD   54 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHH---H----HHH------TTCEEEESCTTSHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHH---H----HHh------cCccccccccCCHHH
Confidence            34777775 779999999984  556777777643221   1    111      235667778777653

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=94.33  E-value=0.22  Score=31.82  Aligned_cols=26  Identities=23%  Similarity=0.227  Sum_probs=23.9

Q ss_pred             CCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           48 GDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        48 ~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      |.+-+|..+|++|++.|++|.+++|+
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~   33 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRT   33 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECC
Confidence            56789999999999999999999986

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.19  E-value=0.077  Score=35.19  Aligned_cols=38  Identities=24%  Similarity=0.230  Sum_probs=32.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      ..+.||++.|.|. |.||+.+|+.+...|++|+..++..
T Consensus        39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~   76 (197)
T d1j4aa1          39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFR   76 (197)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccCCeEEEecc-cccchhHHHhHhhhcccccccCccc
Confidence            3578999999975 6799999999999999999888753

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.80  E-value=0.058  Score=36.77  Aligned_cols=36  Identities=31%  Similarity=0.542  Sum_probs=31.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++|++++|-|- +.+|..+|+.|.+.|+.|++.+.+
T Consensus        36 ~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~   71 (230)
T d1leha1          36 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVN   71 (230)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeeccc
Confidence            478999988864 679999999999999999988765

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.73  E-value=0.12  Score=32.28  Aligned_cols=36  Identities=11%  Similarity=0.085  Sum_probs=29.2

Q ss_pred             CCEEEEec-CCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           40 GMVALVTG-GDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        40 ~~~~litG-~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      ++.++|.+ +++.||.++|..|++.|++|.++.+...
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            45566654 5677999999999999999999988754

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=93.60  E-value=0.37  Score=28.68  Aligned_cols=81  Identities=20%  Similarity=0.253  Sum_probs=53.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChH-HHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDE-NCKRVVDEV  118 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~  118 (149)
                      ||++||.--...+...+...|.+.|+.|+....+   ..++.+.+   ..    .  ...++-+|+.-++ +--.+++++
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~---~~~al~~~---~~----~--~~dliilD~~mp~~~G~e~~~~i   68 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATN---GREAVEKY---KE----L--KPDIVTMDITMPEMNGIDAIKEI   68 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHH---HH----H--CCSEEEEECSCGGGCHHHHHHHH
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECC---HHHHHHHH---Hh----c--cCCEEEEecCCCCCCHHHHHHHH
Confidence            6889999888888888888898889998755443   33333333   22    1  2345556666544 344677777


Q ss_pred             HHhcCCccEEEeCC
Q 044851          119 VNAYDRIDILVNNA  132 (149)
Q Consensus       119 ~~~~g~id~li~~a  132 (149)
                      ++....+-+++..+
T Consensus        69 r~~~~~~pvi~ls~   82 (118)
T d1u0sy_          69 MKIDPNAKIIVCSA   82 (118)
T ss_dssp             HHHCTTCCEEEEEC
T ss_pred             HHhCCCCcEEEEEc
Confidence            77777777776653

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.60  E-value=0.078  Score=31.74  Aligned_cols=33  Identities=24%  Similarity=0.265  Sum_probs=28.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      +.++|.|| |.+|.++|..|.+.|.+|.++.+..
T Consensus        23 ~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          23 KSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            56777765 6799999999999999999998864

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.57  E-value=0.31  Score=30.13  Aligned_cols=75  Identities=13%  Similarity=0.143  Sum_probs=44.0

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC--cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      +-|.|+ |.+|..++..|+..+.  .+++++.+.   +.++-...++..... ..........|.   ++          
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~---~~~~g~~~Dl~~~~~-~~~~~~~~~~~~---~~----------   64 (140)
T d1a5za1           3 IGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDK---KRAEGDALDLIHGTP-FTRRANIYAGDY---AD----------   64 (140)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH---HHHHHHHHHHHHHGG-GSCCCEEEECCG---GG----------
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEeccc---ccccchhcccccccc-ccccccccCCcH---HH----------
Confidence            667786 8899999999998873  488999863   333322222222100 122333333332   21          


Q ss_pred             hcCCccEEEeCCcCCC
Q 044851          121 AYDRIDILVNNAAEQY  136 (149)
Q Consensus       121 ~~g~id~li~~ag~~~  136 (149)
                       ...-|++|.++|...
T Consensus        65 -~~~adivvitag~~~   79 (140)
T d1a5za1          65 -LKGSDVVIVAAGVPQ   79 (140)
T ss_dssp             -GTTCSEEEECCCCCC
T ss_pred             -hcCCCEEEEeccccc
Confidence             235699999998754

>d1kl7a_ c.79.1.1 (A:) Threonine synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.46  E-value=0.17  Score=38.42  Aligned_cols=77  Identities=17%  Similarity=0.239  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCC-hHHHHHHHHHHHc-CCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHH
Q 044851           39 RGMVALVTGGDS-GIGRAVCHCFAQE-GATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        39 ~~~~~litG~s~-gig~~~a~~L~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +++.+.|.||++ .-|.+.+..+... +.+|++++....-.+--+..+...      .+.+++.+.+| .+.++++.++.
T Consensus       149 ~~~~~~il~aTSGDTG~Aa~~af~~~~~i~v~vlyP~~~vS~iQ~~Qmtt~------~~~Nv~~i~v~-G~fDDcq~~vk  221 (511)
T d1kl7a_         149 EKKQITVVGATSGDTGSAAIYGLRGKKDVSVFILYPTGRISPIQEEQMTTV------PDENVQTLSVT-GTFDNCQDIVK  221 (511)
T ss_dssp             SCCCEEEEEECSSSHHHHHHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHC------CCTTEEEEEES-SCHHHHHHHHH
T ss_pred             cCceEEEEEecCCCccHHHHHHhcCCCCceeEEeccCCCCchHHHHHHhhc------CCceEEEEEec-cChHHHHHHHH
Confidence            446677776655 5999999998844 667888887643222111222211      35678888888 57889999999


Q ss_pred             HHHHhc
Q 044851          117 EVVNAY  122 (149)
Q Consensus       117 ~~~~~~  122 (149)
                      ++....
T Consensus       222 ~~f~d~  227 (511)
T d1kl7a_         222 AIFGDK  227 (511)
T ss_dssp             HHHHCS
T ss_pred             HHHhhh
Confidence            987643

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.39  E-value=0.49  Score=29.47  Aligned_cols=32  Identities=19%  Similarity=0.336  Sum_probs=25.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-C--CcEEEEecC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQE-G--ATVAFTYVK   73 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~-g--~~Vi~~~~~   73 (149)
                      .+.|+|++|.+|..+|..|..+ +  ..+++.+..
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~   36 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIA   36 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSS
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccc
Confidence            4789999999999999998754 4  458888875

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=93.29  E-value=0.03  Score=36.78  Aligned_cols=31  Identities=23%  Similarity=0.246  Sum_probs=26.5

Q ss_pred             CEEEEecCCChHHHH-----HHHHHHHcCCcEEEEe
Q 044851           41 MVALVTGGDSGIGRA-----VCHCFAQEGATVAFTY   71 (149)
Q Consensus        41 ~~~litG~s~gig~~-----~a~~L~~~g~~Vi~~~   71 (149)
                      |.++|||.+.|+|+.     +|..|+++|.+|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            679999988777765     7889999999999886

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.24  E-value=0.083  Score=31.67  Aligned_cols=34  Identities=18%  Similarity=0.086  Sum_probs=28.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      |.++|.|+ +.+|.++|..|.+.|.+|.++.+...
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            46777664 67999999999999999999988753

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=93.22  E-value=0.052  Score=37.29  Aligned_cols=37  Identities=22%  Similarity=0.357  Sum_probs=30.3

Q ss_pred             CCCEEEEecCCChHHHH-----HHHHHHHcCCcEEEEecCCC
Q 044851           39 RGMVALVTGGDSGIGRA-----VCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        39 ~~~~~litG~s~gig~~-----~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      .++.++|+.|.||.|+.     +|..|++.|.+|++++.++.
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            45677788778888877     47899999999999998864

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=93.22  E-value=0.097  Score=31.54  Aligned_cols=35  Identities=23%  Similarity=0.153  Sum_probs=29.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      .+.++|.|+ |-||.++|..|.+.|..|.++.++..
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            366888875 67999999999999999999987643

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.14  E-value=0.021  Score=36.55  Aligned_cols=30  Identities=10%  Similarity=0.113  Sum_probs=25.4

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      +-+. |.+-+|.++|++|.+.|+.|.+++|+
T Consensus         4 Ig~I-GlG~MG~~iA~~L~~~g~~v~~~d~~   33 (162)
T d3cuma2           4 IAFI-GLGHMGAPMATNLLKAGYLLNVFDLV   33 (162)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSS
T ss_pred             EEEE-EEHHHHHHHHHHHHHCCCeEEEEECc
Confidence            4444 45779999999999999999999986

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.14  E-value=0.12  Score=31.31  Aligned_cols=35  Identities=23%  Similarity=0.374  Sum_probs=29.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      ++.++|.|| +.+|.++|..|.+.|.+|.++.+...
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            467777764 78999999999999999999988753

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.99  E-value=0.55  Score=28.93  Aligned_cols=78  Identities=12%  Similarity=0.143  Sum_probs=53.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCcEE-EEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           42 VALVTGGDSGIGRAVCHCFAQE-GATVA-FTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~-g~~Vi-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      ++.|.|++|-.|+.+++.+.+. ++.++ .+++... ..       .+..    ....   +..|++.++.+...++...
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~-------~~~~----~~~D---vvIDFS~p~~~~~~~~~~~   65 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LS-------LLTD----GNTE---VVIDFTHPDVVMGNLEFLI   65 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-TH-------HHHT----TTCS---EEEECCCTTTHHHHHHHHH
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hh-------hhcc----ccCC---EEEEcccHHHHHHHHHHHH
Confidence            3789999999999999988776 45544 4444311 11       1111    1222   4479999999999998887


Q ss_pred             HhcCCccEEEeCCcCCC
Q 044851          120 NAYDRIDILVNNAAEQY  136 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~  136 (149)
                      +.  .+-+|+-..|+..
T Consensus        66 ~~--~~~~ViGTTG~~~   80 (135)
T d1yl7a1          66 DN--GIHAVVGTTGFTA   80 (135)
T ss_dssp             HT--TCEEEECCCCCCH
T ss_pred             hc--CCCEEEeccccch
Confidence            65  4678888888753

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=92.94  E-value=0.3  Score=31.72  Aligned_cols=39  Identities=21%  Similarity=0.129  Sum_probs=32.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      ..+.++++.|.| .|.||..+++.+...|.+|+..++...
T Consensus        40 ~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d2naca1          40 YDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRL   78 (188)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCC
T ss_pred             eeccccceeecc-ccccchhhhhhhhccCceEEEEeeccc
Confidence            357888888887 467999999999999999999988643

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.92  E-value=0.084  Score=32.00  Aligned_cols=33  Identities=21%  Similarity=0.373  Sum_probs=28.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      |.++|.|| |-||.++|..|.+.|+.|.++.++.
T Consensus        24 ~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          24 KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            56777765 6799999999999999999998864

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=92.92  E-value=0.48  Score=28.11  Aligned_cols=69  Identities=13%  Similarity=0.100  Sum_probs=48.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      ..++.|.|+ |=+|+-++..-.+.|.++++++.++..-.               ....-.++..|+.|.+.+..+.... 
T Consensus        11 ~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA---------------~~va~~~i~~~~~d~~~l~~~~~~~-   73 (111)
T d1kjqa2          11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPA---------------MHVAHRSHVINMLDGDALRRVVELE-   73 (111)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGG---------------GGGSSEEEECCTTCHHHHHHHHHHH-
T ss_pred             CCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCch---------------hhcCCeEEECCCCCHHHHHHHHHhh-
Confidence            346889984 45999999999999999999998743211               1111256778999988877776654 


Q ss_pred             HhcCCccEEE
Q 044851          120 NAYDRIDILV  129 (149)
Q Consensus       120 ~~~g~id~li  129 (149)
                          ++|++.
T Consensus        74 ----~~DviT   79 (111)
T d1kjqa2          74 ----KPHYIV   79 (111)
T ss_dssp             ----CCSEEE
T ss_pred             ----CCceEE
Confidence                467664

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=92.90  E-value=0.084  Score=31.80  Aligned_cols=34  Identities=9%  Similarity=-0.022  Sum_probs=28.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      .++++|.|| |.+|.++|..|.+.|.+|.++.|..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            356777765 6799999999999999999999864

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=92.79  E-value=0.097  Score=34.75  Aligned_cols=32  Identities=22%  Similarity=0.234  Sum_probs=26.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      |.|+|.|| +-.|.+.|..|.++|++|.++.+.
T Consensus         7 ~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           7 KRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            45888875 567899999999999999999875

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=92.72  E-value=0.14  Score=33.37  Aligned_cols=38  Identities=29%  Similarity=0.268  Sum_probs=33.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      .+.||++.|.|.+. ||+.+++.+...|++|+..++...
T Consensus        39 ~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          39 LIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCceEEEecccc-ccccceeeeecccccccccccccc
Confidence            47899999998755 999999999999999999988753

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=92.59  E-value=0.12  Score=30.96  Aligned_cols=36  Identities=19%  Similarity=0.238  Sum_probs=29.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      .++.++|.|+ +-+|.++|..|.+.|..|.++.+.+.
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            3567777764 67999999999999999999988643

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.53  E-value=0.25  Score=32.10  Aligned_cols=39  Identities=26%  Similarity=0.163  Sum_probs=32.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      ..+.+|++.|.| .+.||+.+++.+...|++|+..++...
T Consensus        40 ~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~   78 (184)
T d1ygya1          40 TEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVS   78 (184)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             ccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCC
Confidence            357888888887 578999999999999999999887643

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.52  E-value=0.092  Score=31.85  Aligned_cols=34  Identities=18%  Similarity=0.250  Sum_probs=28.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      +.++|.|+ +-||.++|..|.+.|.+|.++.|...
T Consensus        26 ~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          26 KKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             SEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            56777764 67999999999999999999988643

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.49  E-value=0.093  Score=31.88  Aligned_cols=34  Identities=9%  Similarity=0.151  Sum_probs=29.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      |+++|.|+ +.||.++|..|.+.|.+|.++.|+..
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            57888876 46999999999999999999998743

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.45  E-value=0.12  Score=31.15  Aligned_cols=35  Identities=23%  Similarity=0.261  Sum_probs=28.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      ++.++|.|| |.+|.++|..|.+.|.+|.++.+.+.
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            356777664 67999999999999999999988643

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=92.43  E-value=0.69  Score=28.67  Aligned_cols=32  Identities=22%  Similarity=0.241  Sum_probs=27.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--cEEEEecC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVK   73 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~   73 (149)
                      .+-|+|++|.+|..+|..|..++.  .+++++..
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~   35 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIP   35 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCG
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecC
Confidence            378999999999999999999974  38888753

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.42  E-value=0.098  Score=35.16  Aligned_cols=33  Identities=18%  Similarity=0.101  Sum_probs=26.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      +|+|+|.||+ -=|+..|..|++.|.+|+++.++
T Consensus         1 ~KkV~IIGaG-~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGAG-VSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEECcC-HHHHHHHHHHHhCCCCEEEEeCC
Confidence            5778888764 45778899999999999999875

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=92.37  E-value=0.43  Score=29.47  Aligned_cols=32  Identities=16%  Similarity=0.226  Sum_probs=26.9

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC--cEEEEecCCC
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVKPQ   75 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~~~   75 (149)
                      +.|+|+ |.+|..++..|+..|.  .+++++.++.
T Consensus         3 I~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~   36 (142)
T d1guza1           3 ITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEG   36 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCceEEEeccccc
Confidence            677786 8999999999999973  5999998754

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=92.35  E-value=0.17  Score=34.17  Aligned_cols=36  Identities=22%  Similarity=0.389  Sum_probs=30.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKP   74 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~   74 (149)
                      +++++++|.| .||+|..++..|+..|.. +.+++.+.
T Consensus        28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~   64 (247)
T d1jw9b_          28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDT   64 (247)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcc
Confidence            5678899998 578999999999999975 88887553

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=92.24  E-value=0.36  Score=29.92  Aligned_cols=34  Identities=12%  Similarity=0.186  Sum_probs=27.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-cEEEEecCCC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGA-TVAFTYVKPQ   75 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~-~Vi~~~~~~~   75 (149)
                      +.+-|+|+ |.+|..+|..|+..+. .+++++.++.
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~   36 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEG   36 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccc
Confidence            34677786 8899999999998874 6888888643

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.08  E-value=0.11  Score=33.21  Aligned_cols=35  Identities=9%  Similarity=0.065  Sum_probs=28.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCC
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQ   75 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~   75 (149)
                      +|+++|.|| |..|...|..|.+.|++ |.++.++..
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            466888875 56889999999999985 888887754

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=92.08  E-value=0.13  Score=35.52  Aligned_cols=33  Identities=18%  Similarity=0.219  Sum_probs=29.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEE
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFT   70 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~   70 (149)
                      .+++++++|.| .+.+|..+++.|.+.|+.|+.+
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvav   65 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTL   65 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEE
Confidence            57899999998 5889999999999999998755

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=92.04  E-value=0.14  Score=32.88  Aligned_cols=37  Identities=22%  Similarity=0.443  Sum_probs=32.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      .+.||+++|.|- +.+|+.+|+++...|++|+++..+|
T Consensus        20 ~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DP   56 (163)
T d1v8ba1          20 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDP   56 (163)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred             eecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCc
Confidence            478999999975 5699999999999999999998874

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.01  E-value=0.2  Score=30.17  Aligned_cols=35  Identities=23%  Similarity=0.276  Sum_probs=29.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      .+|.++|.| ++.+|.++|..|.+.|.+|.++.+..
T Consensus        29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence            456777775 46899999999999999999998764

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=91.87  E-value=0.43  Score=31.36  Aligned_cols=71  Identities=23%  Similarity=0.216  Sum_probs=45.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      .+.|+++|=.|++.|+   ++..++..|+. |+.++.++    .+.+...   .    ....+.++.+|+.+.       
T Consensus        46 dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~----~a~~~ar---~----N~~~~~~~~~D~~~l-------  104 (197)
T d1ne2a_          46 NIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDP----DAIETAK---R----NCGGVNFMVADVSEI-------  104 (197)
T ss_dssp             SSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCH----HHHHHHH---H----HCTTSEEEECCGGGC-------
T ss_pred             CCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCH----HHHHHHH---H----ccccccEEEEehhhc-------
Confidence            3689999999988773   23345666765 99998752    2222222   2    234567888887542       


Q ss_pred             HHHHHhcCCccEEEeCCcC
Q 044851          116 DEVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~  134 (149)
                            .+++|++|.|--+
T Consensus       105 ------~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 ------SGKYDTWIMNPPF  117 (197)
T ss_dssp             ------CCCEEEEEECCCC
T ss_pred             ------CCcceEEEeCccc
Confidence                  2578999888644

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=91.83  E-value=0.42  Score=30.97  Aligned_cols=38  Identities=21%  Similarity=0.152  Sum_probs=32.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      ..+.++++.|.| -|.||+.+|+.+...|++|+..++..
T Consensus        40 ~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          40 FEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccceEEEEee-cccchhhhhhhcccccceEeeccccc
Confidence            357888888885 57899999999999999999998764

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=91.67  E-value=0.21  Score=31.07  Aligned_cols=32  Identities=13%  Similarity=0.188  Sum_probs=25.7

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC--cEEEEecCCC
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVKPQ   75 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~~~   75 (149)
                      +.|.|+ |.+|..+|..|+..+.  .+++++++..
T Consensus         4 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~   37 (142)
T d1y6ja1           4 VAIIGA-GFVGASAAFTMALRQTANELVLIDVFKE   37 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC--
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCC
Confidence            666686 9999999999999974  4999998753

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=91.56  E-value=0.31  Score=31.98  Aligned_cols=39  Identities=23%  Similarity=0.198  Sum_probs=33.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      ..+.||++.|.|. |.||+.+|+.+...|++|+..++...
T Consensus        45 ~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          45 ARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             eeeeCceEEEecc-ccccccceeeeeccccceeeccCccc
Confidence            4588999999965 77999999999999999999988643

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=91.56  E-value=0.13  Score=32.64  Aligned_cols=31  Identities=13%  Similarity=0.178  Sum_probs=25.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCc--EEEEecC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGAT--VAFTYVK   73 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~--Vi~~~~~   73 (149)
                      .+.|.|. |-+|.++|+.|.+.|..  |+.++++
T Consensus         3 ~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~   35 (171)
T d2g5ca2           3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDIN   35 (171)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred             EEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECC
Confidence            4778875 88999999999999964  6777775

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.28  E-value=0.13  Score=34.08  Aligned_cols=35  Identities=17%  Similarity=0.325  Sum_probs=28.6

Q ss_pred             CCCEEEEecCCChHHH-----HHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGR-----AVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~-----~~a~~L~~~g~~Vi~~~~~   73 (149)
                      ++|++.|+|+.||.|+     ++|..|++.|.+|++++-+
T Consensus         1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            3678889988877765     4778999999999999865

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=91.27  E-value=0.17  Score=34.52  Aligned_cols=34  Identities=21%  Similarity=0.303  Sum_probs=29.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEe
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTY   71 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~   71 (149)
                      .++|++++|-| .|.+|..+|+.|.+.|++|+.++
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            47899999986 67899999999999999987554

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=91.27  E-value=0.4  Score=30.99  Aligned_cols=38  Identities=18%  Similarity=0.156  Sum_probs=31.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      ....|.++|.|+ +.-|.+.|..|+++|++|.+..+.+.
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            345678888875 56788999999999999999988653

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=91.18  E-value=0.22  Score=35.00  Aligned_cols=34  Identities=15%  Similarity=0.074  Sum_probs=29.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEe
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTY   71 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~   71 (149)
                      .++|++++|-|- |.+|..+|+.|.+.|+.|+.++
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            578999999876 6899999999999999987654

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=91.13  E-value=0.24  Score=32.59  Aligned_cols=39  Identities=26%  Similarity=0.219  Sum_probs=33.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      ..+.+|++.|.|. |.||+.+|+.+...|++|+..++...
T Consensus        41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence            3578999999875 67999999999999999999987643

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.97  E-value=0.42  Score=31.86  Aligned_cols=80  Identities=20%  Similarity=0.130  Sum_probs=50.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .+..+|-.|+++|--.++.-+|+  |.+|+.+.+++.   -.....+.+...   ...++.++..|..+.          
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~---l~~~a~~~l~~~---g~~nv~~~~gd~~~g----------  139 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPE---LVEFAKRNLERA---GVKNVHVILGDGSKG----------  139 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHH---HHHHHHHHHHHT---TCCSEEEEESCGGGC----------
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHH---HHHHHHHHHHHc---CCceeEEEECccccC----------
Confidence            46679999988887666666666  567888888622   222222323321   335677888887542          


Q ss_pred             HHhcCCccEEEeCCcCCC
Q 044851          119 VNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~  136 (149)
                      ....+++|.++.++++..
T Consensus       140 ~~~~~pfD~Iiv~~a~~~  157 (215)
T d1jg1a_         140 FPPKAPYDVIIVTAGAPK  157 (215)
T ss_dssp             CGGGCCEEEEEECSBBSS
T ss_pred             CcccCcceeEEeeccccc
Confidence            123467999998888754

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.88  E-value=0.18  Score=37.37  Aligned_cols=36  Identities=22%  Similarity=0.331  Sum_probs=29.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKP   74 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~   74 (149)
                      +++..++|.|+ ||+|..+++.|+..|.. +.+++.+.
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~   71 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDT   71 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCC
Confidence            35567999988 67999999999999974 88887653

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=90.81  E-value=0.22  Score=30.23  Aligned_cols=35  Identities=17%  Similarity=0.227  Sum_probs=29.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      .+.++|.|+ |-||.++|..|.+.|.+|.++.+...
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            356888865 67999999999999999999987653

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=90.75  E-value=0.16  Score=31.79  Aligned_cols=30  Identities=17%  Similarity=0.287  Sum_probs=25.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcC-CcEEEEecC
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEG-ATVAFTYVK   73 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g-~~Vi~~~~~   73 (149)
                      +.+.|+ |.+|.++++.|.+.| .+|++++|+
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~   33 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRG   33 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCC
Confidence            556665 889999999999887 679999887

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=90.70  E-value=0.23  Score=30.92  Aligned_cols=35  Identities=17%  Similarity=0.233  Sum_probs=27.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC--cEEEEecCC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVKP   74 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~~   74 (149)
                      .||+++|.|| |..|..+|..|.+.+.  +|+++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            3788999986 4568899999999885  477877664

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=90.53  E-value=0.16  Score=34.73  Aligned_cols=35  Identities=14%  Similarity=0.155  Sum_probs=28.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      +.|.|+|.|++ --|...|..|.+.|.+|+++.++.
T Consensus        29 ~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            44678888864 458899999999999999998753

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.49  E-value=1  Score=29.30  Aligned_cols=75  Identities=21%  Similarity=0.194  Sum_probs=46.2

Q ss_pred             CCCCCEEEEecCCCh-HHHHHHHHHHHcCC-cEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHH
Q 044851           37 KLRGMVALVTGGDSG-IGRAVCHCFAQEGA-TVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRV  114 (149)
Q Consensus        37 ~~~~~~~litG~s~g-ig~~~a~~L~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  114 (149)
                      .++|+++|=.|++.| ++..    ++..|+ .|+.++.+   ...+....+.+..    .+....++..|+...      
T Consensus        44 dl~g~~vLDlg~GtG~l~i~----a~~~g~~~v~~vdi~---~~~~~~a~~N~~~----~~~~~~~~~~d~~~~------  106 (201)
T d1wy7a1          44 DIEGKVVADLGAGTGVLSYG----ALLLGAKEVICVEVD---KEAVDVLIENLGE----FKGKFKVFIGDVSEF------  106 (201)
T ss_dssp             SSTTCEEEEETCTTCHHHHH----HHHTTCSEEEEEESC---HHHHHHHHHHTGG----GTTSEEEEESCGGGC------
T ss_pred             CCCCCEEEECcCcchHHHHH----HHHcCCCEEEEEcCc---HHHHHHHHHHHHH----cCCCceEEECchhhh------
Confidence            368899999997665 5443    345676 58999886   2223222222222    344566777776432      


Q ss_pred             HHHHHHhcCCccEEEeCCcCC
Q 044851          115 VDEVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       115 ~~~~~~~~g~id~li~~ag~~  135 (149)
                             .+++|++|.|.-+.
T Consensus       107 -------~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 -------NSRVDIVIMNPPFG  120 (201)
T ss_dssp             -------CCCCSEEEECCCCS
T ss_pred             -------CCcCcEEEEcCccc
Confidence                   34789999887653

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=90.48  E-value=0.32  Score=29.72  Aligned_cols=36  Identities=19%  Similarity=0.191  Sum_probs=29.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      .++.++|.|| |-+|.++|..|.+.|.+|.++.+...
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            3567888754 77999999999999999999988643

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=90.08  E-value=0.33  Score=32.28  Aligned_cols=34  Identities=24%  Similarity=0.203  Sum_probs=27.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      .++|+|.|| |--|..+|..|++.|.+|+++.++.
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            345888876 4567788889999999999998864

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=89.94  E-value=0.12  Score=35.23  Aligned_cols=34  Identities=21%  Similarity=0.383  Sum_probs=26.4

Q ss_pred             CEEEEecCCChHHH-----HHHHHHHHcCCcEEEEecCCC
Q 044851           41 MVALVTGGDSGIGR-----AVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        41 ~~~litG~s~gig~-----~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      |++.|+| -||+|+     .+|..|++.|.+|.+++.+++
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            3566787 666655     477899999999999998864

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=89.93  E-value=1.8  Score=29.35  Aligned_cols=38  Identities=18%  Similarity=0.079  Sum_probs=27.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDK   78 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~   78 (149)
                      ..|+++|=.|+++|+-   +..+++.|++|+.++.++...+
T Consensus       119 ~~g~~VLDiGcGsG~l---~i~aa~~g~~V~gvDis~~av~  156 (254)
T d2nxca1         119 RPGDKVLDLGTGSGVL---AIAAEKLGGKALGVDIDPMVLP  156 (254)
T ss_dssp             CTTCEEEEETCTTSHH---HHHHHHTTCEEEEEESCGGGHH
T ss_pred             CccCEEEEcccchhHH---HHHHHhcCCEEEEEECChHHHH
Confidence            3678899999988862   3345667999999998754333

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=89.91  E-value=0.76  Score=28.89  Aligned_cols=33  Identities=15%  Similarity=0.077  Sum_probs=27.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      ..+.++|..|++.|   ..+..|+++|++|+.++.+
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S   51 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELS   51 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEEC
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeeccc
Confidence            35678999998887   3566788889999999986

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=89.69  E-value=1.1  Score=29.02  Aligned_cols=39  Identities=15%  Similarity=0.123  Sum_probs=32.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      ..+.|+++.|.|. |.||+.+++.+...|.+|+..++...
T Consensus        43 ~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          43 EKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             ceecccceEEeec-ccchHHHHHHHHhhcccccccccccc
Confidence            4578999988875 67999999999999999999887643

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.68  E-value=1.1  Score=31.10  Aligned_cols=62  Identities=18%  Similarity=0.157  Sum_probs=37.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCCh
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFD  108 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~  108 (149)
                      +++++||-.|++.|+   ++..+++.|+. |+.++.++.    +....+.....  .....+.++..|+.+.
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~----~~~a~~~~~~~--~~~~~i~~~~~~~~~l   96 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEI----LYQAMDIIRLN--KLEDTITLIKGKIEEV   96 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTH----HHHHHHHHHHT--TCTTTEEEEESCTTTS
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHH----HHHHHHHHHHh--CCCccceEEEeeHHHh
Confidence            578999999988775   34556667874 888887632    22222222221  1334566677776653

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.62  E-value=0.17  Score=33.43  Aligned_cols=35  Identities=23%  Similarity=0.304  Sum_probs=27.7

Q ss_pred             CEEEEecCCChHHH-----HHHHHHHHcCCcEEEEecCCC
Q 044851           41 MVALVTGGDSGIGR-----AVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        41 ~~~litG~s~gig~-----~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      |++.|+++.||.|+     ++|..|++.|.+|.+++-+..
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~   41 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT   41 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            57888887777665     578899999999999987643

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=89.53  E-value=0.43  Score=31.19  Aligned_cols=82  Identities=13%  Similarity=0.149  Sum_probs=51.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      ..+=+|-|+||....+++++ . ++.|+.+++++   ..+....+.+..    ...++.++..++.+..   .++...  
T Consensus        26 ~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~---~~l~~a~~~l~~----~~~r~~~~~~~f~~~~---~~~~~~--   91 (192)
T d1m6ya2          26 IILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDS---EVLRIAEEKLKE----FSDRVSLFKVSYREAD---FLLKTL--   91 (192)
T ss_dssp             EEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCH---HHHHHHHHHTGG----GTTTEEEEECCGGGHH---HHHHHT--
T ss_pred             EEEEecCCCcHHHHHHHhcC-C-CCeEEEeechH---HHHHHHHHhhcc----ccccccchhHHHhhHH---HHHHHc--
Confidence            33445667888888888886 3 46899999962   223222222222    3556888888887643   222222  


Q ss_pred             hcCCccEEEeCCcCCC
Q 044851          121 AYDRIDILVNNAAEQY  136 (149)
Q Consensus       121 ~~g~id~li~~ag~~~  136 (149)
                      ....+|+++.--|++.
T Consensus        92 ~~~~vdgIl~DlGvSs  107 (192)
T d1m6ya2          92 GIEKVDGILMDLGVST  107 (192)
T ss_dssp             TCSCEEEEEEECSCCH
T ss_pred             CCCCcceeeeccchhH
Confidence            1358999999888854

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.51  E-value=0.53  Score=31.07  Aligned_cols=82  Identities=16%  Similarity=0.192  Sum_probs=45.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .|.++|-.|++.|--..+.-++......|+.++.++.   .+....+.+...   ...++.++..|..+.          
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~---~~~~a~~~~~~~---~~~n~~~~~~d~~~~----------  138 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRK---ICEIAKRNVERL---GIENVIFVCGDGYYG----------  138 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHH---HHHHHHHHHHHT---TCCSEEEEESCGGGC----------
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchh---hHHHhhhhHhhh---cccccccccCchHHc----------
Confidence            4668999998777544444444444558998888632   222222323321   223455565565431          


Q ss_pred             HHhcCCccEEEeCCcCCC
Q 044851          119 VNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~  136 (149)
                      ....+.+|.++.+++...
T Consensus       139 ~~~~~~fD~I~~~~~~~~  156 (213)
T d1dl5a1         139 VPEFSPYDVIFVTVGVDE  156 (213)
T ss_dssp             CGGGCCEEEEEECSBBSC
T ss_pred             cccccchhhhhhhccHHH
Confidence            112346898888877643

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.50  E-value=0.29  Score=31.49  Aligned_cols=30  Identities=17%  Similarity=0.263  Sum_probs=25.7

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      +.|.|+ |..|.++|..|++.|.+|.+++|.
T Consensus         3 I~ViGa-G~~GtalA~~la~~g~~V~l~~r~   32 (180)
T d1txga2           3 VSILGA-GAMGSALSVPLVDNGNEVRIWGTE   32 (180)
T ss_dssp             EEEESC-CHHHHHHHHHHHHHCCEEEEECCG
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEEec
Confidence            556665 779999999999999999999884

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=89.41  E-value=1.8  Score=28.03  Aligned_cols=39  Identities=23%  Similarity=0.153  Sum_probs=28.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDA   80 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~   80 (149)
                      -.++|.|+. -.|..-++--...|++|.+++.+....+.+
T Consensus        30 a~VvViGaG-vaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l   68 (183)
T d1l7da1          30 ARVLVFGVG-VAGLQAIATAKRLGAVVMATDVRAATKEQV   68 (183)
T ss_dssp             CEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             cEEEEEcCc-HHHHHHHHHHHHcCCEEEEEeccHHHHHHH
Confidence            358888763 456677777777899999999986655444

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=89.32  E-value=1.5  Score=27.05  Aligned_cols=31  Identities=19%  Similarity=0.360  Sum_probs=26.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--cEEEEecC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVK   73 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~   73 (149)
                      .+.|+|+ |.+|..+|..|+..|.  .+++++.+
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~   35 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIA   35 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEec
Confidence            3677786 8899999999999985  49999986

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=88.95  E-value=0.35  Score=30.05  Aligned_cols=32  Identities=9%  Similarity=0.108  Sum_probs=25.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      +-|. |.|-+|..+|+.|.++|+.|+.++++..
T Consensus         3 IgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~   34 (152)
T d1i36a2           3 VGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRS   34 (152)
T ss_dssp             EEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCC
T ss_pred             EEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchh
Confidence            3344 4588999999999999999988887643

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=88.92  E-value=1.6  Score=27.00  Aligned_cols=23  Identities=26%  Similarity=0.270  Sum_probs=21.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEG   64 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g   64 (149)
                      .+.|+||+|.+|..++..|+..+
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~   28 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGE   28 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhcc
Confidence            59999999999999999999875

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=88.86  E-value=0.1  Score=30.75  Aligned_cols=43  Identities=12%  Similarity=0.179  Sum_probs=31.7

Q ss_pred             CCCCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           31 DYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        31 ~~~~~~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      .+.....++||.++|.|++ .-|..+|..|+..+.++++..++.
T Consensus        23 ~y~~~~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          23 LFREPELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GCCCGGGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             cCcchhhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            3444445899999999876 446688999998888877676653

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=88.70  E-value=1.6  Score=26.54  Aligned_cols=77  Identities=17%  Similarity=0.186  Sum_probs=47.9

Q ss_pred             CCCEEEEecCCC-h---------HHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCCh
Q 044851           39 RGMVALVTGGDS-G---------IGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFD  108 (149)
Q Consensus        39 ~~~~~litG~s~-g---------ig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~  108 (149)
                      ..|.+||.|++. -         -+...++.|.+.|+.++++..++..-..-.+           ...+   +..+--..
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d-----------~aD~---lYfePlt~   71 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE-----------MADA---TYIEPIHW   71 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG-----------GSSE---EECSCCCH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh-----------hcce---eeeecCCH
Confidence            446799998642 1         2455778899999999999988654321000           1122   22334445


Q ss_pred             HHHHHHHHHHHHhcCCccEEEeCCcC
Q 044851          109 ENCKRVVDEVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       109 ~~v~~~~~~~~~~~g~id~li~~ag~  134 (149)
                      +++.++++.-     ++|.++...|.
T Consensus        72 e~v~~Ii~~E-----~pd~il~~~GG   92 (127)
T d1a9xa3          72 EVVRKIIEKE-----RPDAVLPTMGG   92 (127)
T ss_dssp             HHHHHHHHHH-----CCSEEECSSSH
T ss_pred             HHHHHHHHHh-----CcCCeEEEeee
Confidence            6666666653     78988877664

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.70  E-value=0.31  Score=31.47  Aligned_cols=31  Identities=13%  Similarity=0.115  Sum_probs=25.7

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      |+|.| +|--|...|..|++.|.+|+++.++.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            67777 34568899999999999999998864

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=88.61  E-value=0.38  Score=33.70  Aligned_cols=35  Identities=17%  Similarity=0.235  Sum_probs=28.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCC
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      .|.++|.|| |--|..+|..|++.|.+|+++..+..
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            567888876 34577899999999999999987643

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=88.42  E-value=0.8  Score=30.21  Aligned_cols=36  Identities=19%  Similarity=0.238  Sum_probs=29.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      -.+|.++|.|| +.-|...|..|.+.|++|.++.++.
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            35678999886 4457899999999999999998764

>d1qh8b_ c.92.2.3 (B:) Nitrogenase iron-molybdenum protein, beta chain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, beta chain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=88.13  E-value=3.7  Score=30.73  Aligned_cols=85  Identities=12%  Similarity=0.120  Sum_probs=49.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +.||++.|.|. ......+++.|...|..++.+.-... ..+..+.++.+... .+.+....++  .-.|..++++.+.+
T Consensus       358 l~GkrvaI~gd-~~~~~~la~fL~ElG~e~~~v~~~~~-~~~~~~~~~~~l~~-~~~g~~~~v~--~~~Dl~~l~~~i~~  432 (519)
T d1qh8b_         358 LHGKKFGLYGD-PDFVMGLTRFLLELGCEPTVILSHNA-NKRWQKAMNKMLDA-SPYGRDSEVF--INCDLWHFRSLMFT  432 (519)
T ss_dssp             HTTCEEEEESC-HHHHHHHHHHHHHTTCEEEEEEETTC-CHHHHHHHHHHHHH-STTCTTCEEE--ESCCHHHHHHHHHH
T ss_pred             cCCcEEEEECC-cHHHHHHHHHHHHcCCeeeEEEecCC-CHHHHHHHHHHHHh-CcCCCCCEEE--ECCCHHHHHHHHhh
Confidence            57888888764 55778889999988998554433322 22333333333321 1123333333  23355666666655


Q ss_pred             HHHhcCCccEEEeCC
Q 044851          118 VVNAYDRIDILVNNA  132 (149)
Q Consensus       118 ~~~~~g~id~li~~a  132 (149)
                      .     ++|.+|-|.
T Consensus       433 ~-----~pDLliG~s  442 (519)
T d1qh8b_         433 R-----QPDFMIGNS  442 (519)
T ss_dssp             H-----CCSEEEECT
T ss_pred             c-----CCCEEEECC
Confidence            4     789999774

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=87.84  E-value=1.1  Score=30.88  Aligned_cols=80  Identities=16%  Similarity=0.118  Sum_probs=44.7

Q ss_pred             CEEEEecCCCh-HHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHHH
Q 044851           41 MVALVTGGDSG-IGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEVV  119 (149)
Q Consensus        41 ~~~litG~s~g-ig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  119 (149)
                      +.++-.|+++| |+..+++   ...++|+.++.++   ..+.-..+....  ......+.+...|+.+.         ..
T Consensus       112 ~~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~---~Al~~A~~Na~~--~~~~~~~~i~~~~~~~~---------~~  174 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVAK---FSDAIVFATDVSS---KAVEIARKNAER--HGVSDRFFVRKGEFLEP---------FK  174 (271)
T ss_dssp             CEEEEESCTTSHHHHHHHH---HSSCEEEEEESCH---HHHHHHHHHHHH--TTCTTSEEEEESSTTGG---------GG
T ss_pred             cEEEEeeeeeehhhhhhhh---cccceeeechhhh---hHHHHHHHHHHH--cCCCceeEEeecccccc---------cc
Confidence            45665665555 5555543   2467899999863   222222222222  11223455666777543         23


Q ss_pred             HhcCCccEEEeCCcCCCC
Q 044851          120 NAYDRIDILVNNAAEQYE  137 (149)
Q Consensus       120 ~~~g~id~li~~ag~~~~  137 (149)
                      ...+++|++|.|--+...
T Consensus       175 ~~~~~fDlIVsNPPYI~~  192 (271)
T d1nv8a_         175 EKFASIEMILSNPPYVKS  192 (271)
T ss_dssp             GGTTTCCEEEECCCCBCG
T ss_pred             cccCcccEEEEcccccCc
Confidence            345789999999887643

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=87.79  E-value=2.5  Score=29.56  Aligned_cols=81  Identities=17%  Similarity=0.076  Sum_probs=45.2

Q ss_pred             CCCEEEEecC-CChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGG-DSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~-s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +++++|=..+ +|+++...    ++.|+.|+.++.+   ...+....+..... .-....+.++..|+      ..++..
T Consensus       132 ~~~rVLdlf~~tG~~sl~a----a~~GA~V~~VD~s---~~al~~a~~N~~ln-~~~~~~~~~i~~D~------~~~l~~  197 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLVA----AAAGAEVTHVDAS---KKAIGWAKENQVLA-GLEQAPIRWICEDA------MKFIQR  197 (309)
T ss_dssp             SCCEEEEETCTTCHHHHHH----HHTTCEEEEECSC---HHHHHHHHHHHHHH-TCTTSCEEEECSCH------HHHHHH
T ss_pred             CCCeEEEecCCCcHHHHHH----HhCCCeEEEEeCh---HHHHHHHHHhhhhh-cccCCcEEEEeCCH------HHhHHH
Confidence            4667776654 55565544    4579999988875   32222222222110 00123456666554      455666


Q ss_pred             HHHhcCCccEEEeCCc
Q 044851          118 VVNAYDRIDILVNNAA  133 (149)
Q Consensus       118 ~~~~~g~id~li~~ag  133 (149)
                      ..++..++|+||.+.-
T Consensus       198 ~~~~~~~fD~IilDPP  213 (309)
T d2igta1         198 EERRGSTYDIILTDPP  213 (309)
T ss_dssp             HHHHTCCBSEEEECCC
T ss_pred             HhhcCCCCCEEEECCC
Confidence            6666668999998643

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=87.78  E-value=0.28  Score=32.07  Aligned_cols=38  Identities=24%  Similarity=0.223  Sum_probs=30.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           36 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        36 ~~~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      ..++||.|+|.|++.. |..+|..+++.++.++.+.++.
T Consensus        28 ~~~~gK~V~VvG~G~S-a~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          28 VDFSGQRVGVIGTGSS-GIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             CCCBTCEEEEECCSHH-HHHHHHHHHHHBSEEEEEESSC
T ss_pred             CCCCCCEEEEECCCcc-HHHHHHHHHhhhcccccccccc
Confidence            3589999999987654 7899999999999877776654

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=87.58  E-value=1.4  Score=29.28  Aligned_cols=77  Identities=17%  Similarity=0.037  Sum_probs=46.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      .+.++|-.|+++|--.+   .|++.+.+|+.+..+    +.+.+..+....    ...++.++..|....          
T Consensus        70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~----~~~~~~A~~~~~----~~~nv~~~~~d~~~g----------  128 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEIN----EKMYNYASKLLS----YYNNIKLILGDGTLG----------  128 (224)
T ss_dssp             TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESC----HHHHHHHHHHHT----TCSSEEEEESCGGGC----------
T ss_pred             ccceEEEecCCCCHHHH---HHHHHhccccccccc----HHHHHHHHHHHh----cccccccccCchhhc----------
Confidence            46679999988774333   344556789988875    233333333332    345677777776431          


Q ss_pred             HHhcCCccEEEeCCcCCC
Q 044851          119 VNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~  136 (149)
                      ....+++|.+|.+++...
T Consensus       129 ~~~~~pfD~Iiv~~a~~~  146 (224)
T d1vbfa_         129 YEEEKPYDRVVVWATAPT  146 (224)
T ss_dssp             CGGGCCEEEEEESSBBSS
T ss_pred             chhhhhHHHHHhhcchhh
Confidence            122357899988887643

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=87.39  E-value=2.1  Score=26.52  Aligned_cols=33  Identities=15%  Similarity=0.205  Sum_probs=26.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQ   75 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~   75 (149)
                      .+-|.|+ |.+|..+|..|...+.. ++++++++.
T Consensus         5 KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~   38 (150)
T d1t2da1           5 KIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKN   38 (150)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCC
Confidence            4777785 89999999988888754 889998753

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=87.32  E-value=1.9  Score=27.15  Aligned_cols=90  Identities=10%  Similarity=0.017  Sum_probs=53.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCcEE-EEecCCCChHHHHHHHHHHHhccC-------C---CCCCceEEEecCCChH
Q 044851           42 VALVTGGDSGIGRAVCHCFAQE-GATVA-FTYVKPQEDKDAKETLEMLREAKT-------P---DAKDPMAISADLGFDE  109 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~-g~~Vi-~~~~~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~~~~~Dv~~~~  109 (149)
                      .+.|.|++|-.|+.+++.+.+. ++.++ .+++.....  ......++.....       .   .-.... +..|++.++
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~--~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D-ViIDFs~p~   82 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSL--LGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPE   82 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTT--CSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchh--ccchhhhhhccccCCceeeccHHHHhcccc-eEEEeccHH
Confidence            4899999999999999999887 55544 444432110  0000000000000       0   001112 457999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEeCCcCCC
Q 044851          110 NCKRVVDEVVNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       110 ~v~~~~~~~~~~~g~id~li~~ag~~~  136 (149)
                      .+...++...+.  ++.+|+-..|+..
T Consensus        83 ~~~~~~~~a~~~--~~~~ViGTTG~~~  107 (162)
T d1diha1          83 GTLNHLAFCRQH--GKGMVIGTTGFDE  107 (162)
T ss_dssp             HHHHHHHHHHHT--TCEEEECCCCCCH
T ss_pred             HHHHHHHHHHhc--cceeEEecCCCcH
Confidence            998888877665  5788888888743

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=87.17  E-value=0.39  Score=28.38  Aligned_cols=33  Identities=21%  Similarity=0.274  Sum_probs=27.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      +.++|.| ++.+|.++|..|.+.|.+|.++.+.+
T Consensus        22 ~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          22 QHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHhhcccceEEEeeec
Confidence            5677665 47899999999999999999998864

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.11  E-value=0.39  Score=32.55  Aligned_cols=31  Identities=10%  Similarity=0.119  Sum_probs=27.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      |+|.||+ -.|+.+|..|.+.|.+|+++.+++
T Consensus         5 V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           5 VAIIGAG-PSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             EEEECCS-HHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            7888875 789999999999999999998864

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.03  E-value=1.9  Score=28.23  Aligned_cols=32  Identities=19%  Similarity=0.046  Sum_probs=24.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++++|=.|++.|.   ++..|++.|++|+.++.+
T Consensus        41 ~~~~iLDiGcGtG~---~~~~l~~~~~~v~gvD~s   72 (251)
T d1wzna1          41 EVRRVLDLACGTGI---PTLELAERGYEVVGLDLH   72 (251)
T ss_dssp             CCCEEEEETCTTCH---HHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEeCCCCCc---cchhhcccceEEEEEeec
Confidence            45679999988763   355677889999999886

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=87.00  E-value=1  Score=29.80  Aligned_cols=33  Identities=9%  Similarity=-0.160  Sum_probs=26.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      ..++++|=.|++.|.   ++..|++.|.+|+.++.+
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S   68 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLS   68 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECSC
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccc
Confidence            456789999988774   566777889999998876

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=86.95  E-value=1.7  Score=27.61  Aligned_cols=77  Identities=19%  Similarity=0.141  Sum_probs=42.5

Q ss_pred             CCCEEEEecCCCh-HHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           39 RGMVALVTGGDSG-IGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        39 ~~~~~litG~s~g-ig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      .+.++|=.|++.| ++.    .|++.+.+|+.++.++..   +....+.+...  ....++.++.+|..          +
T Consensus        33 ~g~~VLDiGcGsG~~s~----~lA~~~~~V~avD~~~~~---l~~a~~n~~~~--gl~~~v~~~~gda~----------~   93 (186)
T d1l3ia_          33 KNDVAVDVGCGTGGVTL----ELAGRVRRVYAIDRNPEA---ISTTEMNLQRH--GLGDNVTLMEGDAP----------E   93 (186)
T ss_dssp             TTCEEEEESCTTSHHHH----HHHTTSSEEEEEESCHHH---HHHHHHHHHHT--TCCTTEEEEESCHH----------H
T ss_pred             CCCEEEEEECCeEcccc----cccccceEEEEecCCHHH---HHHHHHHHHHc--CCCcceEEEECchh----------h
Confidence            5677888887765 544    445567789999986332   22222223220  02246677777632          1


Q ss_pred             HHHhcCCccEEEeCCcC
Q 044851          118 VVNAYDRIDILVNNAAE  134 (149)
Q Consensus       118 ~~~~~g~id~li~~ag~  134 (149)
                      .......+|.+|.+.+.
T Consensus        94 ~~~~~~~~D~v~~~~~~  110 (186)
T d1l3ia_          94 ALCKIPDIDIAVVGGSG  110 (186)
T ss_dssp             HHTTSCCEEEEEESCCT
T ss_pred             cccccCCcCEEEEeCcc
Confidence            12233467777766543

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.63  E-value=1.6  Score=25.92  Aligned_cols=32  Identities=22%  Similarity=0.152  Sum_probs=26.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      +.++|.|| +-||.++|..|.+.|.+|.++.++
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            34777764 679999999999999999988875

>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Azotobacter vinelandii [TaxId: 354]

Probab=86.36  E-value=0.31  Score=33.44  Aligned_cols=33  Identities=24%  Similarity=0.493  Sum_probs=25.9

Q ss_pred             EEEEecCCChHHHH-----HHHHHHHcCCcEEEEecCCC
Q 044851           42 VALVTGGDSGIGRA-----VCHCFAQEGATVAFTYVKPQ   75 (149)
Q Consensus        42 ~~litG~s~gig~~-----~a~~L~~~g~~Vi~~~~~~~   75 (149)
                      ++.|.| -||.|+.     +|..|++.|.+|++++-+++
T Consensus         4 ~Iaisg-KGGVGKTT~a~NLA~~LA~~G~rVLlID~DpQ   41 (289)
T d2afhe1           4 QCAIYG-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPK   41 (289)
T ss_dssp             EEEEEE-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred             EEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEecCCC
Confidence            466676 5666554     78899999999999998864

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=86.12  E-value=0.75  Score=31.56  Aligned_cols=33  Identities=27%  Similarity=0.418  Sum_probs=22.4

Q ss_pred             CEEEEecCCCh--H--HHHHHHHHHHcCCcEEEEecC
Q 044851           41 MVALVTGGDSG--I--GRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        41 ~~~litG~s~g--i--g~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      |.++|++|+.|  +  +.+++++|.++|+.|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            34566654333  2  456899999999998876643

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=85.96  E-value=0.49  Score=31.42  Aligned_cols=30  Identities=27%  Similarity=0.351  Sum_probs=25.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      |+|.|+ |--|...|..|.+.|++|+++.++
T Consensus         3 V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~   32 (347)
T d2ivda1           3 VAVVGG-GISGLAVAHHLRSRGTDAVLLESS   32 (347)
T ss_dssp             EEEECC-BHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            778876 556889999999999999999875

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=85.62  E-value=0.63  Score=28.91  Aligned_cols=26  Identities=12%  Similarity=0.119  Sum_probs=23.5

Q ss_pred             CCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           48 GDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        48 ~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      |.|-+|.++++.|.+.|++++++.|+
T Consensus         7 G~G~mG~al~~~l~~~~~~i~v~~r~   32 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHELIISGSS   32 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred             eccHHHHHHHHHHHhCCCeEEEEcCh
Confidence            56789999999999999999999886

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.54  E-value=2.6  Score=25.77  Aligned_cols=30  Identities=10%  Similarity=0.112  Sum_probs=25.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC--cEEEEecC
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGA--TVAFTYVK   73 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~--~Vi~~~~~   73 (149)
                      +.|.|+ |.+|..+|..|+..|.  .+++++.+
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~   34 (142)
T d1ojua1           3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIA   34 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHhcCcCceEEEEecc
Confidence            667786 8899999999998874  38899886

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.50  E-value=2.5  Score=29.21  Aligned_cols=62  Identities=19%  Similarity=0.190  Sum_probs=36.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCCh
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFD  108 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~  108 (149)
                      ++|++||-.|++.|+   ++..+++.|+. |+.++.++. ...+.+.   +..  +....++.++..|+.+.
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~---~~~--n~~~~~v~~~~~~~~~~   94 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKI---VKA--NKLDHVVTIIKGKVEEV   94 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHH---HHH--TTCTTTEEEEESCTTTC
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhH---HHH--hCCccccceEeccHHHc
Confidence            478999999988875   34556667875 888887532 2222222   222  11234466666666553

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=85.28  E-value=2.3  Score=24.93  Aligned_cols=80  Identities=15%  Similarity=0.211  Sum_probs=50.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChH-HHHHHHHHH
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDE-NCKRVVDEV  118 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~  118 (149)
                      +|++||.--...+...+.+.|...|+.|.....    ..++.+.+   ..    ..  ...+-+|+.-+. +=-.++.++
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~----g~eal~~~---~~----~~--~dlillD~~mP~~~G~el~~~l   67 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAAN----GLQALDIV---TK----ER--PDLVLLDMKIPGMDGIEILKRM   67 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESS----HHHHHHHH---HH----HC--CSEEEEESCCTTCCHHHHHHHH
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCC----HHHHHHHH---Hh----CC--CCEEEEeccCCCCCHHHHHHHH
Confidence            467899988888888888888889999875542    33333333   22    22  344555665433 223567777


Q ss_pred             HHhcCCccEEEeCC
Q 044851          119 VNAYDRIDILVNNA  132 (149)
Q Consensus       119 ~~~~g~id~li~~a  132 (149)
                      ++....+-+++..+
T Consensus        68 r~~~~~~pvi~lt~   81 (119)
T d1peya_          68 KVIDENIRVIIMTA   81 (119)
T ss_dssp             HHHCTTCEEEEEES
T ss_pred             HHhCCCCcEEEEec
Confidence            77666666666554

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=85.25  E-value=0.52  Score=31.59  Aligned_cols=31  Identities=32%  Similarity=0.402  Sum_probs=26.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      ++|.|| |-.|.++|.+|++.|.+|+++.+..
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            667754 6689999999999999999998763

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=85.01  E-value=2.6  Score=25.30  Aligned_cols=78  Identities=12%  Similarity=0.058  Sum_probs=46.9

Q ss_pred             CCCEEEEecCCC----------hHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCCh
Q 044851           39 RGMVALVTGGDS----------GIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFD  108 (149)
Q Consensus        39 ~~~~~litG~s~----------gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~  108 (149)
                      ..|.+||.|++.          --+...++.|.+.|..++++..++..-..              ......-+..+--..
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVst--------------d~d~aD~lYfeplt~   68 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVST--------------DYDTSDRLYFEPVTL   68 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTT--------------STTSSSEEECCCCSH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhc--------------ChhhcCceEEccCCH
Confidence            346799998642          23556778999999999999888654321              111111222333344


Q ss_pred             HHHHHHHHHHHHhcCCccEEEeCCcCC
Q 044851          109 ENCKRVVDEVVNAYDRIDILVNNAAEQ  135 (149)
Q Consensus       109 ~~v~~~~~~~~~~~g~id~li~~ag~~  135 (149)
                      +.+..+++.-     ++|.+|..-|..
T Consensus        69 e~v~~Ii~~E-----~p~~ii~~~GGQ   90 (121)
T d1a9xa4          69 EDVLEIVRIE-----KPKGVIVQYGGQ   90 (121)
T ss_dssp             HHHHHHHHHH-----CCSEEECSSSTH
T ss_pred             HHHHHHHHHh-----CCCEEEeehhhh
Confidence            5565555543     678888776653

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=84.90  E-value=0.57  Score=27.69  Aligned_cols=34  Identities=21%  Similarity=0.204  Sum_probs=25.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC---CcEEEEecCC
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEG---ATVAFTYVKP   74 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g---~~Vi~~~~~~   74 (149)
                      .+.++|.|| |.+|.++|..|.+.|   .+|.++.+..
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            357888877 789999997766554   5698888764

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=84.71  E-value=0.8  Score=28.59  Aligned_cols=30  Identities=13%  Similarity=0.100  Sum_probs=22.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCcEEEE
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGATVAFT   70 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~Vi~~   70 (149)
                      ++.++|.|+ |.+|.++|..|.+.|.++.++
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCCceEEE
Confidence            456777764 678999999999999875444

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=84.30  E-value=3.2  Score=25.80  Aligned_cols=45  Identities=11%  Similarity=0.018  Sum_probs=29.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC--CcEEEEecCCCChHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEG--ATVAFTYVKPQEDKDAKETLEM   86 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g--~~Vi~~~~~~~~~~~~~~~~~~   86 (149)
                      |.+.|.|.+|+||.....-+.+..  ++|+.+.-. .....+.+...+
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~-~N~~~L~~q~~~   48 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG-KNVTRMVEQCLE   48 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES-SCHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec-CcHHHHHHHHHH
Confidence            468999999999999988777763  556655433 224444444433

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=84.08  E-value=3.6  Score=26.12  Aligned_cols=77  Identities=16%  Similarity=0.125  Sum_probs=45.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      ....++|.|+. -.|+.-++.....|+.|.+++.+.   ..++ .++....      ..+.   +-.++.+.+.+.+.  
T Consensus        31 ~pa~V~ViGaG-vaG~~A~~~A~~lGA~V~~~D~~~---~~l~-~l~~~~~------~~~~---~~~~~~~~l~~~~~--   94 (168)
T d1pjca1          31 KPGKVVILGGG-VVGTEAAKMAVGLGAQVQIFDINV---ERLS-YLETLFG------SRVE---LLYSNSAEIETAVA--   94 (168)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESCH---HHHH-HHHHHHG------GGSE---EEECCHHHHHHHHH--
T ss_pred             CCcEEEEECCC-hHHHHHHHHHhhCCCEEEEEeCcH---HHHH-HHHHhhc------ccce---eehhhhhhHHHhhc--
Confidence            34568888763 457777777788899999999873   2222 2232221      1222   23344444443333  


Q ss_pred             HHhcCCccEEEeCCcCCC
Q 044851          119 VNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~  136 (149)
                           .-|++|.++-+-.
T Consensus        95 -----~aDivI~aalipG  107 (168)
T d1pjca1          95 -----EADLLIGAVLVPG  107 (168)
T ss_dssp             -----TCSEEEECCCCTT
T ss_pred             -----cCcEEEEeeecCC
Confidence                 4699998887644

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=83.93  E-value=2  Score=29.44  Aligned_cols=78  Identities=13%  Similarity=0.014  Sum_probs=46.7

Q ss_pred             CCEEEEecCC-ChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHHH
Q 044851           40 GMVALVTGGD-SGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDEV  118 (149)
Q Consensus        40 ~~~~litG~s-~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  118 (149)
                      +..++=.|++ |.|+.+++..+-  .+.|+.++.++   ..+.-..+.....   .-.++.++..|+.+.-         
T Consensus       109 ~~~vlDlGtGSG~I~i~la~~~p--~~~v~avDis~---~Al~~A~~Na~~~---~~~~v~~~~~d~~~~~---------  171 (274)
T d2b3ta1         109 PCRILDLGTGTGAIALALASERP--DCEIIAVDRMP---DAVSLAQRNAQHL---AIKNIHILQSDWFSAL---------  171 (274)
T ss_dssp             CCEEEEETCTTSHHHHHHHHHCT--TSEEEEECSSH---HHHHHHHHHHHHH---TCCSEEEECCSTTGGG---------
T ss_pred             ccceeeeehhhhHHHHHHHhhCC--cceeeeccchh---HHHhHHHHHHHHh---Ccccceeeeccccccc---------
Confidence            3457777754 558888877642  46799998863   2222222222221   1235788888986532         


Q ss_pred             HHhcCCccEEEeCCcCCC
Q 044851          119 VNAYDRIDILVNNAAEQY  136 (149)
Q Consensus       119 ~~~~g~id~li~~ag~~~  136 (149)
                        ...++|++|.|--+..
T Consensus       172 --~~~~fDlIvsNPPYi~  187 (274)
T d2b3ta1         172 --AGQQFAMIVSNPPYID  187 (274)
T ss_dssp             --TTCCEEEEEECCCCBC
T ss_pred             --CCCceeEEEecchhhh
Confidence              1247999999987654

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=83.59  E-value=1.2  Score=30.08  Aligned_cols=33  Identities=18%  Similarity=0.349  Sum_probs=26.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHc-CCcEEEE
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQE-GATVAFT   70 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~~-g~~Vi~~   70 (149)
                      .++|++++|-|- +.+|..+|+.|.+. |+.|+.+
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~v   62 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAV   62 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeec
Confidence            478999999987 55999999999865 8887644

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.51  E-value=1.1  Score=29.00  Aligned_cols=30  Identities=20%  Similarity=0.267  Sum_probs=25.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      +-|. |.|-+|..+|..|++.|++|+.++.+
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n   32 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVS   32 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCC
Confidence            4444 66889999999999999999999876

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=83.41  E-value=0.25  Score=32.17  Aligned_cols=31  Identities=19%  Similarity=0.283  Sum_probs=26.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           42 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        42 ~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .+.|.|+ |..|.++|..|++.|++|.+++|+
T Consensus         9 KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~   39 (189)
T d1n1ea2           9 KAVVFGS-GAFGTALAMVLSKKCREVCVWHMN   39 (189)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTEEEEEEECSC
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCeEEEEEec
Confidence            4777775 558999999999999999999986

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=83.12  E-value=1.3  Score=26.25  Aligned_cols=33  Identities=12%  Similarity=0.111  Sum_probs=28.1

Q ss_pred             CEEEEecCC---ChHHHHHHHHHHHcCCcEEEEecC
Q 044851           41 MVALVTGGD---SGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        41 ~~~litG~s---~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      |.+.|.|+|   +..|..+.+.|.+.|++|+.+..+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~   37 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPN   37 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccc
Confidence            578999987   459999999999999998877654

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=83.11  E-value=3  Score=24.51  Aligned_cols=79  Identities=15%  Similarity=0.208  Sum_probs=51.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChH-HHHHHHHHHH
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDE-NCKRVVDEVV  119 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~  119 (149)
                      .++||.--...+...+.+.|.+.|++|.....    ..++.+.+   .      ......+-+|+.-+. +=-.++.+++
T Consensus         4 ~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~----~~~a~~~l---~------~~~~dlii~D~~mp~~~G~el~~~l~   70 (123)
T d1krwa_           4 GIVWVVDDDSSIRWVLERALAGAGLTCTTFEN----GNEVLAAL---A------SKTPDVLLSDIRMPGMDGLALLKQIK   70 (123)
T ss_dssp             CEEEEESSSHHHHHHHHHHHHHTTCEEEEESS----SHHHHHHH---T------TCCCSEEEECCSSSSSTTHHHHHHHH
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEeCC----HHHHHHHH---H------hCCCCEEEehhhcCCchHHHHHHHHH
Confidence            46899988889999999999999999876543    33333332   2      234556667765443 2235677777


Q ss_pred             HhcCCccEEEeCC
Q 044851          120 NAYDRIDILVNNA  132 (149)
Q Consensus       120 ~~~g~id~li~~a  132 (149)
                      +....+-+++.++
T Consensus        71 ~~~~~~piI~~t~   83 (123)
T d1krwa_          71 QRHPMLPVIIMTA   83 (123)
T ss_dssp             HHSSSCCEEESCC
T ss_pred             HhCCCCeEEEEec
Confidence            7766666666544

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=82.93  E-value=1.6  Score=27.13  Aligned_cols=34  Identities=18%  Similarity=0.156  Sum_probs=25.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCC
Q 044851           40 GMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKP   74 (149)
Q Consensus        40 ~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~   74 (149)
                      ++.++|.| +|..|...|..+.+.|+. |+++.|+.
T Consensus        45 ~~kVvVIG-GGdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          45 RGAVIVLG-AGDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CSEEEEEC-SSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCEEEEEC-CChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            34466664 456788999999999987 77887764

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=82.82  E-value=1  Score=29.64  Aligned_cols=31  Identities=29%  Similarity=0.292  Sum_probs=25.3

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      ++|.||. .-|...|..|++.|.+|+++.++.
T Consensus         5 ViIIGaG-~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           5 VIVIGGG-PSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCcEEEEeCCC
Confidence            6777754 567789999999999999998764

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=82.79  E-value=3.6  Score=25.17  Aligned_cols=87  Identities=13%  Similarity=0.067  Sum_probs=47.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCC--CCCCceEEEecCCChHHHHHHHHHHHH
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTP--DAKDPMAISADLGFDENCKRVVDEVVN  120 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~  120 (149)
                      +=+.|. +-.|..+|++|.+.|+.+ +++|+   .++..+..+........  .-....++...+.+.+.+......+..
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~   77 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRT---FEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYP   77 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSS---THHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTT
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCC---HHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccccc
Confidence            334444 779999999999888644 56665   23333333333211110  011223344455566777777777766


Q ss_pred             hcCCccEEEeCCcC
Q 044851          121 AYDRIDILVNNAAE  134 (149)
Q Consensus       121 ~~g~id~li~~ag~  134 (149)
                      ...+-.++|.+...
T Consensus        78 ~~~~~~~iid~sT~   91 (156)
T d2cvza2          78 YLREGTYWVDATSG   91 (156)
T ss_dssp             TCCTTEEEEECSCC
T ss_pred             cccccccccccccC
Confidence            55555566655543

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=82.62  E-value=3.7  Score=25.28  Aligned_cols=29  Identities=17%  Similarity=0.282  Sum_probs=25.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcE
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATV   67 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~V   67 (149)
                      +|+++.|.+.++|.|..++..+...|-.+
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l   30 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKL   30 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEE
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCcc
Confidence            68889999999999999999999989555

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=82.60  E-value=4.2  Score=25.82  Aligned_cols=30  Identities=13%  Similarity=-0.041  Sum_probs=23.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .++|=.|++.|.   ++..|++.|++|+.++.+
T Consensus        39 ~~ILDiGcG~G~---~~~~la~~~~~v~giD~S   68 (226)
T d1ve3a1          39 GKVLDLACGVGG---FSFLLEDYGFEVVGVDIS   68 (226)
T ss_dssp             CEEEEETCTTSH---HHHHHHHTTCEEEEEESC
T ss_pred             CEEEEECCCcch---hhhhHhhhhccccccccc
Confidence            468999988775   445677789999999986

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=82.46  E-value=2.9  Score=25.97  Aligned_cols=33  Identities=15%  Similarity=0.154  Sum_probs=25.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc--CCcEEEEecC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQE--GATVAFTYVK   73 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~--g~~Vi~~~~~   73 (149)
                      |.+.|.|++|+||.....-+.+.  .++|+.+.-.
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~   37 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN   37 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC
Confidence            68999999999999988877665  4566655443

>d2ax3a2 c.104.1.1 (A:1-211) Hypothetical protein TM0922, N-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: YjeF N-terminal domain-like
superfamily: YjeF N-terminal domain-like
family: YjeF N-terminal domain-like
domain: Hypothetical protein TM0922, N-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=82.26  E-value=1.3  Score=29.22  Aligned_cols=45  Identities=16%  Similarity=0.241  Sum_probs=30.7

Q ss_pred             CEEEEecC--CChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHH
Q 044851           41 MVALVTGG--DSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLE   85 (149)
Q Consensus        41 ~~~litG~--s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~   85 (149)
                      +.+++.|.  .+|=|+.+|+.|.+.|++|.++........+.....+
T Consensus        42 ~vlvl~G~GNNGGDGl~~Ar~L~~~g~~V~v~~~~~~~~~~~~~~~~   88 (211)
T d2ax3a2          42 RFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYG   88 (211)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHH
T ss_pred             cEEEEECCCCCchhHHHHHHHHHhcCCeeEEEecCccCCcHHHHHHH
Confidence            45566664  4689999999999999998777655444444443333

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=81.99  E-value=3.8  Score=24.93  Aligned_cols=88  Identities=9%  Similarity=-0.001  Sum_probs=51.0

Q ss_pred             CCCEEEEecCC---ChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHH
Q 044851           39 RGMVALVTGGD---SGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        39 ~~~~~litG~s---~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      +.|.+.|.|+|   +..|..+++.|.+.|++|+.+..+...-.- ......+.+    ....+..+. =+..++.+..++
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G-~~~~~sl~d----lp~~iD~v~-i~vp~~~~~~~~   91 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLG-RKCYPSVLD----IPDKIEVVD-LFVKPKLTMEYV   91 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETT-EECBSSGGG----CSSCCSEEE-ECSCHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCC-Ccccccccc----cCccceEEE-EEeCHHHHHHHH
Confidence            46789999998   469999999999999999888765321100 000000111    111122211 123456677777


Q ss_pred             HHHHHhcCCccEEEeCCcC
Q 044851          116 DEVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~  134 (149)
                      +++.+.  .+..++...|.
T Consensus        92 ~e~~~~--g~k~v~~~~G~  108 (139)
T d2d59a1          92 EQAIKK--GAKVVWFQYNT  108 (139)
T ss_dssp             HHHHHH--TCSEEEECTTC
T ss_pred             HHHHHh--CCCEEEEeccc
Confidence            777665  25566655554

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.96  E-value=1.5  Score=29.48  Aligned_cols=34  Identities=18%  Similarity=0.193  Sum_probs=27.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHH-cCCcEEEEe
Q 044851           37 KLRGMVALVTGGDSGIGRAVCHCFAQ-EGATVAFTY   71 (149)
Q Consensus        37 ~~~~~~~litG~s~gig~~~a~~L~~-~g~~Vi~~~   71 (149)
                      .+++++++|-| .+.+|..+|+.|.+ .|+.|+.++
T Consensus        28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            47889988875 78899999999975 599977554

>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, alpha chain
species: Azotobacter vinelandii [TaxId: 354]

Probab=81.86  E-value=3.1  Score=30.79  Aligned_cols=80  Identities=16%  Similarity=0.123  Sum_probs=46.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +.||++.|.++. ....++++.|...|..|+.++.......+.....+.       .....  +..|-.+..++.+.+.+
T Consensus       343 l~Gkrv~i~~~~-~~~~~l~~~l~elGmevv~~~~~~~~~~d~~~~~~~-------~~~~~--~i~~d~~~~el~~~i~~  412 (477)
T d1m1na_         343 LEGKRVMLYIGG-LRPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKE-------MGDST--LLYDDVTGYEFEEFVKR  412 (477)
T ss_dssp             HTTCEEEECBSS-SHHHHTHHHHHTTTCEEEEEEESSCCHHHHHTTTTT-------SCTTC--EEEESCBHHHHHHHHHH
T ss_pred             hcCCcEEEecCc-hhHHHHHHHHHHCCCEEEEEeecCCChHHHHHHHHh-------cCCCc--EEecCCCHHHHHHHHHh
Confidence            578888887653 577888998888899987665442222222111110       11122  22343455566666666


Q ss_pred             HHHhcCCccEEEeCC
Q 044851          118 VVNAYDRIDILVNNA  132 (149)
Q Consensus       118 ~~~~~g~id~li~~a  132 (149)
                      .     ++|++|.+.
T Consensus       413 ~-----~pDL~ig~~  422 (477)
T d1m1na_         413 I-----KPDLIGSGI  422 (477)
T ss_dssp             H-----CCSEEEECH
T ss_pred             c-----CCCEEEECc
Confidence            5     689988664

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=81.60  E-value=1.7  Score=27.26  Aligned_cols=36  Identities=14%  Similarity=0.281  Sum_probs=32.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      ++|+++++.|-.+.+..+++..+...|+++.+++..
T Consensus         2 l~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~P~   37 (163)
T d1pvva2           2 IKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPE   37 (163)
T ss_dssp             CTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEeccc
Confidence            689999999998889999999999999998888764

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=81.44  E-value=0.91  Score=30.47  Aligned_cols=30  Identities=20%  Similarity=0.298  Sum_probs=25.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      ++|.|| |-.|.++|.+|+++|.+|+++.+.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            666654 567999999999999999999875

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.26  E-value=4.8  Score=27.82  Aligned_cols=62  Identities=16%  Similarity=0.123  Sum_probs=36.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCc-EEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCCh
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGAT-VAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFD  108 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~  108 (149)
                      ++|++||-.|++.|+   ++..+++.|+. |+.++.++  .  +....+....  ......+.++..|+.+.
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~--~--~~~a~~~~~~--~~~~~~i~~i~~~~~~l   99 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS--I--IEMAKELVEL--NGFSDKITLLRGKLEDV   99 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST--H--HHHHHHHHHH--TTCTTTEEEEESCTTTS
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH--H--HHHHHHHHHH--hCccccceEEEeehhhc
Confidence            468999999988774   34455677875 88888652  1  2122222222  11334566777777653

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=81.20  E-value=1.1  Score=28.91  Aligned_cols=30  Identities=27%  Similarity=0.228  Sum_probs=25.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      ++|.|+ +..|...|..+++.|.+|+++.+.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            577776 778999999999999999999875

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=81.16  E-value=0.73  Score=32.08  Aligned_cols=30  Identities=20%  Similarity=0.318  Sum_probs=23.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      ++|.|+.- =|..+|.+|++.|.+|+++-+-
T Consensus         7 viIVGsG~-aG~v~A~~La~~G~kVlvLEaG   36 (379)
T d2f5va1           7 VVIVGSGP-IGCTYARELVGAGYKVAMFDIG   36 (379)
T ss_dssp             EEEECCSH-HHHHHHHHHHHTTCEEEEECSS
T ss_pred             EEEECcCH-HHHHHHHHHhhCCCeEEEEecC
Confidence            67776543 3889999999999999999653

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=80.79  E-value=6.8  Score=27.08  Aligned_cols=80  Identities=16%  Similarity=0.126  Sum_probs=47.3

Q ss_pred             CCCCEEEEecCC-ChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCC-CCceEEEecCCChHHHHHHH
Q 044851           38 LRGMVALVTGGD-SGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDA-KDPMAISADLGFDENCKRVV  115 (149)
Q Consensus        38 ~~~~~~litG~s-~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~  115 (149)
                      .+|+++|=.++. |+++.++    +..+++|+.++.++   ..+....+.+..    .+ .++.++..|+.      .+.
T Consensus       144 ~~g~rVLDl~~gtG~~s~~~----a~g~~~V~~vD~s~---~al~~a~~n~~~----ngl~~~~~i~~d~~------~~~  206 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALHL----ALGFREVVAVDSSA---EALRRAEENARL----NGLGNVRVLEANAF------DLL  206 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHHH----HHHEEEEEEEESCH---HHHHHHHHHHHH----TTCTTEEEEESCHH------HHH
T ss_pred             hCCCeeeccCCCCcHHHHHH----HhcCCcEEeecchH---HHHHHHHHHHHH----cCCCCcceeeccHH------HHh
Confidence            467888877754 5565543    34567899999863   333333333332    22 34666766653      344


Q ss_pred             HHHHHhcCCccEEEeCCcC
Q 044851          116 DEVVNAYDRIDILVNNAAE  134 (149)
Q Consensus       116 ~~~~~~~g~id~li~~ag~  134 (149)
                      ..+.....++|.||.+.-.
T Consensus       207 ~~~~~~~~~fD~Vi~DpP~  225 (318)
T d1wxxa2         207 RRLEKEGERFDLVVLDPPA  225 (318)
T ss_dssp             HHHHHTTCCEEEEEECCCC
T ss_pred             hhhHhhhcCCCEEEEcCCc
Confidence            4554555689999988654

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.69  E-value=0.98  Score=30.75  Aligned_cols=31  Identities=23%  Similarity=0.316  Sum_probs=24.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      |+|.||+ --|...|..|++.|.+|+++.++.
T Consensus         2 ViVIGaG-~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGGG-ISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECCB-HHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECCC-HHHHHHHHHHHhCCCCEEEEecCC
Confidence            5677654 458899999999999999998653

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.56  E-value=1.8  Score=28.59  Aligned_cols=35  Identities=26%  Similarity=0.089  Sum_probs=28.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           39 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        39 ~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      .|..+|-.|+++|--.++.-++.....+|+.+++.
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~  110 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHI  110 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESC
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCC
Confidence            46689999999987777777777666789999886

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.52  E-value=1.6  Score=29.17  Aligned_cols=32  Identities=16%  Similarity=0.175  Sum_probs=24.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCcEEEEecC
Q 044851           41 MVALVTGGDSGIGRAVCHCFAQEGATVAFTYVK   73 (149)
Q Consensus        41 ~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~   73 (149)
                      +.|+|.||+ -=|+..|..|.+.|.+|+++-.+
T Consensus         6 ~kViVIGaG-~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           6 GKVIIIGSG-VSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CEEEEECCB-HHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CcEEEECCC-HHHHHHHHHHHhCCCCEEEEeCC
Confidence            347888753 33678899999999999998654

>d1m1nb_ c.92.2.3 (B:) Nitrogenase iron-molybdenum protein, beta chain {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, beta chain
species: Azotobacter vinelandii [TaxId: 354]

Probab=80.41  E-value=6.4  Score=29.40  Aligned_cols=85  Identities=13%  Similarity=0.094  Sum_probs=48.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCCCceEEEecCCChHHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAKDPMAISADLGFDENCKRVVDE  117 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  117 (149)
                      +.||++.|.|. .....++++.|...|..++.+..... ..+..+.++.+..... .+....++.  -.|..++++.+.+
T Consensus       361 l~Gkr~aI~gd-~~~~~~l~~fL~ElG~epv~v~~~~~-~~~~~~~~~~~l~~~~-~g~~~~V~~--~~Dl~~l~~~i~~  435 (522)
T d1m1nb_         361 LHGKRFALWGD-PDFVMGLVKFLLELGCEPVHILCHNG-NKRWKKAVDAILAASP-YGKNATVYI--GKDLWHLRSLVFT  435 (522)
T ss_dssp             HTTCEEEEECC-HHHHHHHHHHHHHTTCEEEEEEETTC-CHHHHHHHHHHHHTSG-GGTTCEEEE--SCCHHHHHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeecCC-CHHHHHHHHHHHhhcc-CCCCCEEEE--CCCHHHHHHHHhh
Confidence            57888888764 56777889999988999664443322 2334444444432100 122233322  1344555555544


Q ss_pred             HHHhcCCccEEEeCC
Q 044851          118 VVNAYDRIDILVNNA  132 (149)
Q Consensus       118 ~~~~~g~id~li~~a  132 (149)
                      .     ++|.+|-|.
T Consensus       436 ~-----~pDlliG~s  445 (522)
T d1m1nb_         436 D-----KPDFMIGNS  445 (522)
T ss_dssp             S-----CCSEEEECT
T ss_pred             C-----CCCEEEECC
Confidence            3     689999774

>d1miob_ c.92.2.3 (B:) Nitrogenase iron-molybdenum protein, beta chain {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, beta chain
species: Clostridium pasteurianum [TaxId: 1501]

Probab=80.37  E-value=7.3  Score=28.31  Aligned_cols=83  Identities=12%  Similarity=0.140  Sum_probs=45.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCcEEEEecCCCChHHHHHHHHHHHhccCCCCC-CceEEEecCCChHHHHHHHH
Q 044851           38 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLREAKTPDAK-DPMAISADLGFDENCKRVVD  116 (149)
Q Consensus        38 ~~~~~~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~  116 (149)
                      +.||++.|.|. ......+++.|...|..++.+.-... .....+...++...   ... ...+  .+-.|..++.+.+.
T Consensus       309 l~Gkrv~I~~~-~~~~~~l~~~L~elg~~~~~~~~~~~-~~~~~~~~~~~l~~---~~~~~~~v--~~~~d~~e~~~~i~  381 (457)
T d1miob_         309 LQGKKVALLGD-PDEIIALSKFIIELGAIPKYVVTGTP-GMKFQKEIDAMLAE---AGIEGSKV--KVEGDFFDVHQWIK  381 (457)
T ss_dssp             HTTCEEEEEEC-HHHHHHHHHHHHTTTCEEEEEEESSC-CHHHHHHHHHHHHT---TTCCSCEE--EESCBHHHHHHHHH
T ss_pred             hCCCEEEEEcC-cHHHHHHHHHHHHcCCeeeeeecCCC-CHHHHHHHHHHHHh---cCCCCCEE--EeCCCHHHHHHHHH
Confidence            57888888765 44788889999888988665443322 22233333333221   111 1222  23344555555554


Q ss_pred             HHHHhcCCccEEEeCC
Q 044851          117 EVVNAYDRIDILVNNA  132 (149)
Q Consensus       117 ~~~~~~g~id~li~~a  132 (149)
                      +.     ++|++|-+.
T Consensus       382 ~~-----~pDLvig~~  392 (457)
T d1miob_         382 NE-----GVDLLISNT  392 (457)
T ss_dssp             HS-----CCSEEEESG
T ss_pred             hc-----CCCEEEECc
Confidence            43     689998763

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=80.26  E-value=1.4  Score=28.32  Aligned_cols=31  Identities=19%  Similarity=0.139  Sum_probs=26.3

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCcEEEEecCC
Q 044851           43 ALVTGGDSGIGRAVCHCFAQEGATVAFTYVKP   74 (149)
Q Consensus        43 ~litG~s~gig~~~a~~L~~~g~~Vi~~~~~~   74 (149)
                      ++|.|+ +..|...|..+++.|.+|+++.++.
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            778877 5679999999999999999998753