BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 044862
         (173 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9LFR3|GASAE_ARATH Gibberellin-regulated protein 14 OS=Arabidopsis thaliana GN=GASA14
           PE=1 SV=1
          Length = 275

 Score = 93.6 bits (231), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 42/65 (64%), Positives = 46/65 (70%), Gaps = 4/65 (6%)

Query: 113 RSNKDCIPLCAARCKAHSRPNIFGRACTTCCVRCKCVPPGTYGNREKCGKCY----TGGN 168
           R+  DC+PLC  RC  HSR N+  RAC TCC RCKCVPPGTYGN+EKCG CY    T G 
Sbjct: 211 RTRIDCVPLCGTRCGQHSRKNVCMRACVTCCYRCKCVPPGTYGNKEKCGSCYANMKTRGG 270

Query: 169 KPKCP 173
           K KCP
Sbjct: 271 KSKCP 275


>sp|Q93X17|SNAK2_SOLTU Snakin-2 OS=Solanum tuberosum GN=SN2 PE=1 SV=1
          Length = 104

 Score = 69.3 bits (168), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 46/84 (54%), Gaps = 5/84 (5%)

Query: 94  KTAPAPQVPSPASSPMPIVRSNKDCIPLCAARCKAHSRPNIFGRACTTCCVRCKCVPPGT 153
           ++    QV S A S         DC   CAARC+  SRP +  RAC TCC RC CVPPGT
Sbjct: 22  QSIQTDQVTSNAISEAAYSYKKIDCGGACAARCRLSSRPRLCNRACGTCCARCNCVPPGT 81

Query: 154 YGNREKCGKCY----TGGNKPKCP 173
            GN E C  CY    T GNK KCP
Sbjct: 82  SGNTETC-PCYASLTTHGNKRKCP 104


>sp|P46689|GASA1_ARATH Gibberellin-regulated protein 1 OS=Arabidopsis thaliana GN=GASA1
           PE=2 SV=2
          Length = 98

 Score = 64.3 bits (155), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/61 (55%), Positives = 39/61 (63%), Gaps = 5/61 (8%)

Query: 117 DCIPLCAARCKAHSRPNIFGRACTTCCVRCKCVPPGTYGNREKCGKCY----TGGNKPKC 172
           DC   C ARC+   RP +  RAC TCC RC CVPPGTYGN +KC +CY    T G + KC
Sbjct: 39  DCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKC-QCYASLTTHGGRRKC 97

Query: 173 P 173
           P
Sbjct: 98  P 98


>sp|F4IQJ4|GASAB_ARATH Gibberellin-regulated protein 11 OS=Arabidopsis thaliana GN=GASA11
           PE=3 SV=1
          Length = 94

 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 39/71 (54%), Gaps = 7/71 (9%)

Query: 110 PIVRSNK----DCIPLCAARCKAHSRPNIFGRACTTCCVRCKCVPPGTYGNREKC---GK 162
            +V SN     DC   C  RC   SRPN+  RAC TCC RC CV PGT GN +KC   G 
Sbjct: 24  DMVTSNDAPKIDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKCPCYGS 83

Query: 163 CYTGGNKPKCP 173
             T G + KCP
Sbjct: 84  LTTHGGRRKCP 94


>sp|P46687|GASA3_ARATH Gibberellin-regulated protein 3 OS=Arabidopsis thaliana GN=GASA3
           PE=2 SV=1
          Length = 99

 Score = 54.3 bits (129), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/61 (52%), Positives = 35/61 (57%), Gaps = 5/61 (8%)

Query: 117 DCIPLCAARCKAHSRPNIFGRACTTCCVRCKCVPPGTYGNREKCGKCY----TGGNKPKC 172
           DC   C  RC   SRPN+  RAC +CC RC CVPPGT GN   C  CY    T G + KC
Sbjct: 40  DCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLC-PCYASITTRGGRLKC 98

Query: 173 P 173
           P
Sbjct: 99  P 99


>sp|Q8GWK5|GASA9_ARATH Gibberellin-regulated protein 9 OS=Arabidopsis thaliana GN=GASA9
           PE=2 SV=1
          Length = 119

 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 36/61 (59%), Gaps = 5/61 (8%)

Query: 117 DCIPLCAARCKAHSRPNIFGRACTTCCVRCKCVPPGTYGNREKCGKCY----TGGNKPKC 172
           +C   CA RC   SR  +  RAC +CC +C+CVPPGT GN   C  CY    T GNK KC
Sbjct: 60  NCGHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASC-PCYASIRTHGNKLKC 118

Query: 173 P 173
           P
Sbjct: 119 P 119


>sp|Q43564|PRP1_MEDTR Repetitive proline-rich cell wall protein 1 OS=Medicago truncatula
           GN=PRP1 PE=2 SV=1
          Length = 206

 Score = 29.6 bits (65), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 44/85 (51%), Positives = 46/85 (54%), Gaps = 8/85 (9%)

Query: 21  PITPPPVVKPPTTYPPPVKPPTTTPPVVKLPTVAP---APPV-KPPTVMP---TPPLKPP 73
           P+  PPVVKPP   PP  KPP   PPV K P V P    PPV KPP V P    PP+  P
Sbjct: 113 PVYKPPVVKPPVYKPPVYKPPVEKPPVYKPPVVKPPVYKPPVYKPPVVKPPVYKPPVYKP 172

Query: 74  PTYPPPV-KPPTTTPPPVSPPKTAP 97
           P Y PPV KPP   PP   PP   P
Sbjct: 173 PVYKPPVEKPPVYKPPVYKPPVEKP 197


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.314    0.137    0.475 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,241,626
Number of Sequences: 539616
Number of extensions: 5798342
Number of successful extensions: 203915
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2749
Number of HSP's successfully gapped in prelim test: 2850
Number of HSP's that attempted gapping in prelim test: 42935
Number of HSP's gapped (non-prelim): 55547
length of query: 173
length of database: 191,569,459
effective HSP length: 109
effective length of query: 64
effective length of database: 132,751,315
effective search space: 8496084160
effective search space used: 8496084160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)