Query 044863
Match_columns 84
No_of_seqs 110 out of 618
Neff 4.8
Searched_HMMs 13730
Date Mon Mar 25 12:56:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044863.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/044863hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1nn7a_ d.42.1.2 (A:) Potassiu 69.0 0.62 4.5E-05 28.0 0.6 58 21-82 2-60 (105)
2 d2bkfa1 d.15.2.2 (A:1-85) Next 66.6 9.1 0.00066 22.4 5.7 53 21-75 7-67 (85)
3 d1unda_ a.14.1.1 (A:) Advillin 66.1 1 7.5E-05 23.0 1.0 18 38-55 1-18 (36)
4 d3kvta_ d.42.1.2 (A:) akv3.1 v 64.9 0.69 5E-05 27.7 0.2 58 20-82 3-63 (103)
5 d1t1da_ d.42.1.2 (A:) Shaker p 50.0 2.1 0.00015 25.4 0.6 57 21-82 3-62 (100)
6 d1y6ia2 a.261.1.1 (A:83-233) M 48.7 0.57 4.2E-05 30.6 -2.4 32 13-46 117-148 (151)
7 d1yu5x1 a.14.1.1 (X:10-76) Vil 46.7 3.2 0.00023 23.7 1.0 19 37-55 31-49 (67)
8 d1b0aa2 c.58.1.2 (A:2-122) Tet 42.5 30 0.0022 20.5 6.9 54 17-82 32-87 (121)
9 d1ujsa_ a.14.1.1 (A:) Actin-bi 40.3 4.8 0.00035 24.1 1.1 21 36-56 45-65 (88)
10 d1a4ia2 c.58.1.2 (A:2-126) Tet 38.8 33 0.0024 20.4 5.1 55 16-82 33-89 (125)
11 d1qzpa_ a.14.1.1 (A:) Dematin 38.4 3.4 0.00025 23.6 0.2 19 37-55 32-50 (68)
12 d1z3xa2 a.261.1.1 (A:88-235) G 38.1 0.34 2.5E-05 31.6 -4.9 30 13-44 117-146 (148)
13 d1tjya_ c.93.1.1 (A:) AI-2 rec 36.2 23 0.0017 21.9 4.1 30 29-58 3-35 (316)
14 d1yu8x1 a.14.1.1 (X:42-76) Vil 35.1 6.4 0.00046 19.6 0.9 17 39-55 1-17 (35)
15 d1qusa_ d.2.1.6 (A:) 36 kDa so 31.1 16 0.0012 25.8 2.9 25 36-60 13-37 (322)
16 d2c60a1 d.15.2.2 (A:43-122) Mi 30.8 46 0.0034 19.2 4.6 53 29-84 11-69 (80)
17 d1t2da2 d.162.1.1 (A:151-315) 30.4 32 0.0023 20.7 4.0 32 21-54 126-157 (165)
18 d1dkgd1 c.55.1.1 (D:3-185) Hea 30.3 13 0.00092 22.9 2.0 41 35-75 109-149 (183)
19 d1whza_ d.50.3.2 (A:) Hypothet 29.9 40 0.0029 18.2 4.5 34 18-51 25-60 (70)
20 d1mlaa1 c.19.1.1 (A:3-127,A:19 25.6 12 0.00084 24.4 1.2 20 39-58 22-41 (235)
21 d3buxb3 d.93.1.1 (B:264-351) C 24.0 29 0.0021 20.4 2.7 38 16-55 35-73 (88)
22 d1oeyj_ d.15.2.2 (J:) Neutroph 24.0 27 0.002 21.2 2.6 30 28-57 17-46 (105)
23 d1pvva1 c.78.1.1 (A:1-150) Orn 23.7 21 0.0016 22.0 2.2 19 37-56 130-150 (150)
24 d2nptb1 d.15.2.2 (B:42-123) Mi 23.5 64 0.0046 18.6 4.2 53 29-84 11-69 (82)
25 d2c35b2 d.230.1.1 (B:1-77) N-t 22.7 56 0.0041 17.5 4.1 27 30-56 9-35 (77)
26 d1y74b1 a.194.1.1 (B:83-132) P 20.8 13 0.00093 19.9 0.5 20 37-56 26-49 (50)
No 1
>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=69.00 E-value=0.62 Score=28.03 Aligned_cols=58 Identities=19% Similarity=0.307 Sum_probs=39.5
Q ss_pred EEEEEcCCCeEEEEeccCC-CcHHHHHHHHhHHHhhCCcCCCCcEEecccHHHHHHHHHHHhc
Q 044863 21 FVVYVGTEMKRFVVPTSYL-KNPIFQQLLDKAAEEYGFHNKQNKIILPCDESTFQRLSIILSK 82 (84)
Q Consensus 21 ~aVyVG~e~~RfvVp~~~L-~hP~F~~LL~~aeeEfG~~~~~G~L~IPC~~~~Fe~vl~~l~~ 82 (84)
+...|| .++|.+..+-| ++|.. +|.+......++.+.|.+-|.-|...|++||..++.
T Consensus 2 I~LNVG--G~~f~t~~~TL~~~p~s--~l~~~~~~~~~~~~~~~~FiDRdp~~F~~IL~ylR~ 60 (105)
T d1nn7a_ 2 IVLNVS--GTRFQTWQDTLERYPDT--LLGSSERDFFYHPETQQYFFDRDPDIFRHILNFYRT 60 (105)
T ss_dssp EEEEET--TEEEEECHHHHHTSCSS--STTSGGGGGGEEGGGTEEEECSCTTTHHHHHHHHHH
T ss_pred EEEEEC--CEEEEEeHHHHhcCCCC--CccccccccCcCCCCCcEEEeCCHHHHHHHHHHHhc
Confidence 567798 59999988766 44431 122222222333444899999999999999998864
No 2
>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]}
Probab=66.64 E-value=9.1 Score=22.45 Aligned_cols=53 Identities=9% Similarity=0.239 Sum_probs=37.6
Q ss_pred EEEEEcCCCeEEEEeccCCCcHHHHHHHHhHHHhhCC--------cCCCCcEEecccHHHHHH
Q 044863 21 FVVYVGTEMKRFVVPTSYLKNPIFQQLLDKAAEEYGF--------HNKQNKIILPCDESTFQR 75 (84)
Q Consensus 21 ~aVyVG~e~~RfvVp~~~L~hP~F~~LL~~aeeEfG~--------~~~~G~L~IPC~~~~Fe~ 75 (84)
+-|.-|++.+||.++.. +++.|.+|..+-+.-||. +.++--++|.|+++.=|.
T Consensus 7 vKvtf~~dt~RF~ls~~--~~~~~~~L~~~i~~rf~l~~~~lkY~Ddd~e~v~l~~d~dl~E~ 67 (85)
T d2bkfa1 7 LNVTFKNEIQSFLVSDP--ENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYEEA 67 (85)
T ss_dssp EEEEETTEEEEEEESCG--GGCCHHHHHHHHHHHHTCSSEEEEEECTTSCEEEECSHHHHHHH
T ss_pred EEEEECCceEEEEecCC--CCCcHHHHHHHHHHhcCcccceEEEEcCCCCEEEEecHHHHHHH
Confidence 33445778999998533 367799999999999885 333345899999765443
No 3
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=66.10 E-value=1 Score=22.99 Aligned_cols=18 Identities=17% Similarity=0.414 Sum_probs=16.6
Q ss_pred CCCcHHHHHHHHhHHHhh
Q 044863 38 YLKNPIFQQLLDKAAEEY 55 (84)
Q Consensus 38 ~L~hP~F~~LL~~aeeEf 55 (84)
||+.-.|++++.++.+||
T Consensus 1 yLsd~dF~~vFgmsr~eF 18 (36)
T d1unda_ 1 YLSEQDFVSVFGITRGQF 18 (36)
T ss_dssp CCCHHHHHHHHSSCHHHH
T ss_pred CCCHHHHHHHHCcCHHHH
Confidence 789999999999999987
No 4
>d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=64.94 E-value=0.69 Score=27.67 Aligned_cols=58 Identities=16% Similarity=0.229 Sum_probs=41.0
Q ss_pred eEEEEEcCCCeEEEEeccCCCc-H--HHHHHHHhHHHhhCCcCCCCcEEecccHHHHHHHHHHHhc
Q 044863 20 HFVVYVGTEMKRFVVPTSYLKN-P--IFQQLLDKAAEEYGFHNKQNKIILPCDESTFQRLSIILSK 82 (84)
Q Consensus 20 ~~aVyVG~e~~RfvVp~~~L~h-P--~F~~LL~~aeeEfG~~~~~G~L~IPC~~~~Fe~vl~~l~~ 82 (84)
.+.+-|| .++|.+..+-|.. | .|..+ ++....+..+.|.+-|--+...|++||..+..
T Consensus 3 rI~LNVG--G~~F~t~~~tL~~~~~s~l~~~---~~~~~~~~~~~~~~fiDRdp~~F~~IL~ylR~ 63 (103)
T d3kvta_ 3 RVIINVG--GIRHETYKATLKKIPATRLSRL---TEGMLNYDPVLNEYFFDRHPGVFAQIINYYRS 63 (103)
T ss_dssp EEEEEET--TEEEEEEHHHHTTSCSSTTTTC---CTTSTTEETTTTEEEECSCTTTHHHHHHHHHH
T ss_pred EEEEEEC--CEEEEEeHHHHhhCccchhHHH---HcCCCccCCCCCcEEecCCHHHHHHHHHHHcc
Confidence 4677899 5999999886653 3 33222 23333444455899999999999999998864
No 5
>d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=50.04 E-value=2.1 Score=25.38 Aligned_cols=57 Identities=14% Similarity=0.248 Sum_probs=39.1
Q ss_pred EEEEEcCCCeEEEEeccCCCc-H--HHHHHHHhHHHhhCCcCCCCcEEecccHHHHHHHHHHHhc
Q 044863 21 FVVYVGTEMKRFVVPTSYLKN-P--IFQQLLDKAAEEYGFHNKQNKIILPCDESTFQRLSIILSK 82 (84)
Q Consensus 21 ~aVyVG~e~~RfvVp~~~L~h-P--~F~~LL~~aeeEfG~~~~~G~L~IPC~~~~Fe~vl~~l~~ 82 (84)
+.+.|| .++|.+..+-|.. | .+..|.... -.+..++|.+-|--|...|++||.-+.+
T Consensus 3 I~LNVG--G~~f~t~~~tL~~~p~s~l~~l~~~~---~~~~~~~g~~FiDRdp~~F~~IL~flR~ 62 (100)
T d1t1da_ 3 VVINVS--GLRFETQLKTLNQFPDTLLGNPQKRN---RYYDPLRNEYFFDRNRPSFDAILYFYQS 62 (100)
T ss_dssp EEEEET--TEEEEEEHHHHHTSTTSTTTCHHHHG---GGEETTTTEEEECSCSTTHHHHHHHHHT
T ss_pred EEEEEC--CEEEEEeHHHHhhCCCchhHHHHhCC---CcCCCCCCeEEEecCHHHHHHHHHHHhc
Confidence 567898 5999998766543 3 333333221 1233445899999999999999998864
No 6
>d1y6ia2 a.261.1.1 (A:83-233) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=48.70 E-value=0.57 Score=30.65 Aligned_cols=32 Identities=28% Similarity=0.478 Sum_probs=19.8
Q ss_pred cCCCCCCeEEEEEcCCCeEEEEeccCCCcHHHHH
Q 044863 13 RSRAPKGHFVVYVGTEMKRFVVPTSYLKNPIFQQ 46 (84)
Q Consensus 13 ~~~vpkG~~aVyVG~e~~RfvVp~~~L~hP~F~~ 46 (84)
+...|+||+|+.-.-...| +--+.|+||.|.+
T Consensus 117 ~l~AP~GHLP~~~~lrG~~--~~~~l~~h~~~~~ 148 (151)
T d1y6ia2 117 DLSAPQGHLPLLNQLRGVR--VAESLYRHPVWSQ 148 (151)
T ss_dssp STTSCTTCCSCCCCTTCTH--HHHHHHTSTHHHH
T ss_pred cCCCCCCCCCccchhhhHH--HHHHHHcCcchhh
Confidence 3468999999853211111 3345789998864
No 7
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=46.74 E-value=3.2 Score=23.66 Aligned_cols=19 Identities=11% Similarity=0.296 Sum_probs=18.0
Q ss_pred cCCCcHHHHHHHHhHHHhh
Q 044863 37 SYLKNPIFQQLLDKAAEEY 55 (84)
Q Consensus 37 ~~L~hP~F~~LL~~aeeEf 55 (84)
.||+.-.|++++.++.+||
T Consensus 31 ~yLsd~dF~~vFgms~~eF 49 (67)
T d1yu5x1 31 NHLSDEDFKAVFGMTRSAF 49 (67)
T ss_dssp GGSCHHHHHHHHSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 6999999999999999998
No 8
>d1b0aa2 c.58.1.2 (A:2-122) Tetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}
Probab=42.52 E-value=30 Score=20.49 Aligned_cols=54 Identities=31% Similarity=0.399 Sum_probs=39.7
Q ss_pred CCCeEEEEEcCCCeEEEEeccCCCcHHHHHHHHhHHHhhCCcCCCCcEEec--ccHHHHHHHHHHHhc
Q 044863 17 PKGHFVVYVGTEMKRFVVPTSYLKNPIFQQLLDKAAEEYGFHNKQNKIILP--CDESTFQRLSIILSK 82 (84)
Q Consensus 17 pkG~~aVyVG~e~~RfvVp~~~L~hP~F~~LL~~aeeEfG~~~~~G~L~IP--C~~~~Fe~vl~~l~~ 82 (84)
+-+...|+||++. ..-.....-.++.++.|+... .+.+| |+...+...+..+++
T Consensus 32 ~P~LavI~vg~d~----------aS~~Yv~~k~k~a~~lGi~~~--~~~l~~~~t~~~l~~~I~~lN~ 87 (121)
T d1b0aa2 32 APGLAVVLVGSNP----------ASQIYVASKRKACEEVGFVSR--SYDLPETTSEAELLELIDTLNA 87 (121)
T ss_dssp CCEEEEEEESCCH----------HHHHHHHHHHHHHHHHTCEEC--CEEECTTCCHHHHHHHHHHHHT
T ss_pred CceEEEEEeCCCh----------hHHHHHHHHHHHHHhhcccee--eeeccccccHHHHHHHHHHHhC
Confidence 4577788999721 012366777888999999875 68887 788888888888764
No 9
>d1ujsa_ a.14.1.1 (A:) Actin-binding LIM protein homologue KIAA0843 {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.32 E-value=4.8 Score=24.05 Aligned_cols=21 Identities=19% Similarity=0.294 Sum_probs=19.0
Q ss_pred ccCCCcHHHHHHHHhHHHhhC
Q 044863 36 TSYLKNPIFQQLLDKAAEEYG 56 (84)
Q Consensus 36 ~~~L~hP~F~~LL~~aeeEfG 56 (84)
-.||+.-.|++++.++.+||-
T Consensus 45 E~YLSdedF~~vFgMsr~eF~ 65 (88)
T d1ujsa_ 45 ERHLSQEEFYQVFGMTISEFD 65 (88)
T ss_dssp GGGSCTTHHHHHHSSCHHHHT
T ss_pred HhcCCHHHHHHHHCcCHHHHH
Confidence 369999999999999999984
No 10
>d1a4ia2 c.58.1.2 (A:2-126) Tetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.83 E-value=33 Score=20.39 Aligned_cols=55 Identities=25% Similarity=0.314 Sum_probs=38.9
Q ss_pred CCCCeEEEEEcCCCeEEEEeccCCCcHHHHHHHHhHHHhhCCcCCCCcEEec--ccHHHHHHHHHHHhc
Q 044863 16 APKGHFVVYVGTEMKRFVVPTSYLKNPIFQQLLDKAAEEYGFHNKQNKIILP--CDESTFQRLSIILSK 82 (84)
Q Consensus 16 vpkG~~aVyVG~e~~RfvVp~~~L~hP~F~~LL~~aeeEfG~~~~~G~L~IP--C~~~~Fe~vl~~l~~ 82 (84)
++-....|+||++. ..-.....-.++.++.|+... .+.+| ++...+...+..+++
T Consensus 33 ~~P~LavIlvg~d~----------aS~~Yv~~k~k~a~~~Gi~~~--~~~l~~~~~e~el~~~I~~lN~ 89 (125)
T d1a4ia2 33 FTPRLAILQVGNRD----------DSNLYINVKLKAAEEIGIKAT--HIKLPRTTTESEVMKYITSLNE 89 (125)
T ss_dssp CCCEEEEEEESCCH----------HHHHHHHHHHHHHHHHTCEEE--EEEECTTCCHHHHHHHHHHHHH
T ss_pred CCceEEEEEcCCCh----------hHHHHHHHHHHHHHhccceEE--EEecCcchhHHHHHHHHHHHhc
Confidence 33457788899732 112455677888999999864 78888 667788888887764
No 11
>d1qzpa_ a.14.1.1 (A:) Dematin {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.43 E-value=3.4 Score=23.58 Aligned_cols=19 Identities=21% Similarity=0.380 Sum_probs=18.0
Q ss_pred cCCCcHHHHHHHHhHHHhh
Q 044863 37 SYLKNPIFQQLLDKAAEEY 55 (84)
Q Consensus 37 ~~L~hP~F~~LL~~aeeEf 55 (84)
.||+.-.|++++.++.+||
T Consensus 32 ~yLsd~dF~~vFgms~~eF 50 (68)
T d1qzpa_ 32 RHLSAEDFSRVFAMSPEEF 50 (68)
T ss_dssp GGBCHHHHHHHSSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 7999999999999999998
No 12
>d1z3xa2 a.261.1.1 (A:88-235) GUN4-like protein Ycf53 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=38.15 E-value=0.34 Score=31.65 Aligned_cols=30 Identities=23% Similarity=0.495 Sum_probs=18.8
Q ss_pred cCCCCCCeEEEEEcCCCeEEEEeccCCCcHHH
Q 044863 13 RSRAPKGHFVVYVGTEMKRFVVPTSYLKNPIF 44 (84)
Q Consensus 13 ~~~vpkG~~aVyVG~e~~RfvVp~~~L~hP~F 44 (84)
....|+||+|+.- ..+-+-|=-..|+||.|
T Consensus 117 ~l~AP~GHLP~~~--~lrg~~~~~~~l~h~a~ 146 (148)
T d1z3xa2 117 DLSAPRGHLPLTN--QLRGVQVLNALLNHPAW 146 (148)
T ss_dssp STTSCTTCCSCCC--CTTCSHHHHHHHTCGGG
T ss_pred cCCCCCCCCCcCC--ccchHHHHHHHhcCccc
Confidence 3468999999743 23334444566777765
No 13
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=36.18 E-value=23 Score=21.89 Aligned_cols=30 Identities=13% Similarity=0.152 Sum_probs=23.0
Q ss_pred CeEEEEeccCCCcHHHHHHHHhH---HHhhCCc
Q 044863 29 MKRFVVPTSYLKNPIFQQLLDKA---AEEYGFH 58 (84)
Q Consensus 29 ~~RfvVp~~~L~hP~F~~LL~~a---eeEfG~~ 58 (84)
.+|..+=+..++||.|+.+.+-+ .+++|++
T Consensus 3 ~~kI~~i~~~~~npf~~~~~~g~~~~a~~~G~~ 35 (316)
T d1tjya_ 3 AERIAFIPKLVGVGFFTSGGNGAQEAGKALGID 35 (316)
T ss_dssp CCEEEEECSSSSSHHHHHHHHHHHHHHHHHTCE
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCE
Confidence 56777778889999999986555 5578864
No 14
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=35.09 E-value=6.4 Score=19.65 Aligned_cols=17 Identities=12% Similarity=0.356 Sum_probs=14.1
Q ss_pred CCcHHHHHHHHhHHHhh
Q 044863 39 LKNPIFQQLLDKAAEEY 55 (84)
Q Consensus 39 L~hP~F~~LL~~aeeEf 55 (84)
|+.-.|++++.++.+||
T Consensus 1 Lsd~dF~~vfgmsr~eF 17 (35)
T d1yu8x1 1 LSDEDFKAVFGMTRSAF 17 (35)
T ss_dssp SCHHHHHHHHSSCHHHH
T ss_pred CCHHHHHHHHCCCHHHH
Confidence 56678999999998887
No 15
>d1qusa_ d.2.1.6 (A:) 36 kDa soluble lytic transglycosylase, SLT35 {Escherichia coli [TaxId: 562]}
Probab=31.14 E-value=16 Score=25.81 Aligned_cols=25 Identities=32% Similarity=0.582 Sum_probs=22.1
Q ss_pred ccCCCcHHHHHHHHhHHHhhCCcCC
Q 044863 36 TSYLKNPIFQQLLDKAAEEYGFHNK 60 (84)
Q Consensus 36 ~~~L~hP~F~~LL~~aeeEfG~~~~ 60 (84)
-+|.+||.++.++++..+++||+.+
T Consensus 13 ~dya~~p~v~~Fi~~la~~~G~s~~ 37 (322)
T d1qusa_ 13 GDFANNPNAQQFIDKMVNKHGFDRQ 37 (322)
T ss_dssp STTTTCHHHHHHHHHHHHHHCCCHH
T ss_pred CCcccCHHHHHHHHHHHHHhCCCHH
Confidence 3689999999999999999999863
No 16
>d2c60a1 d.15.2.2 (A:43-122) Mitogen-activated protein kinase kinase kinase 3, MEKK 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.80 E-value=46 Score=19.21 Aligned_cols=53 Identities=17% Similarity=0.298 Sum_probs=38.3
Q ss_pred CeEEEEeccCCCcH-HHHHHHHhHHHhhCCcCC----CCcEEec-ccHHHHHHHHHHHhcCC
Q 044863 29 MKRFVVPTSYLKNP-IFQQLLDKAAEEYGFHNK----QNKIILP-CDESTFQRLSIILSKQS 84 (84)
Q Consensus 29 ~~RfvVp~~~L~hP-~F~~LL~~aeeEfG~~~~----~G~L~IP-C~~~~Fe~vl~~l~~~~ 84 (84)
++|..||.. -| .|.+|..++...||..-+ ++-|.|| =+-+..++.+..+++|+
T Consensus 11 gEkRIi~f~---RPv~~~dl~~kv~~afGq~ldl~y~n~El~IPl~~Q~DLDkAvellDrs~ 69 (80)
T d2c60a1 11 GERRIIAFS---RPVKYEDVEHKVTTVFGQPLDLHYMNNELSILLKNQDDLDKAIDILDRSS 69 (80)
T ss_dssp TEEEEEEEC---SSCCHHHHHHHHHHHHSSCCEEEEECSSCEEECCSHHHHHHHHHHHHHCS
T ss_pred CceEEEecC---CCccHHHHHHHHHHHhCCeeeeEEecCeEEEecccHHHHHHHHHHHccCc
Confidence 456666643 23 489999999999996321 2568888 35578899999998775
No 17
>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=30.39 E-value=32 Score=20.73 Aligned_cols=32 Identities=22% Similarity=0.175 Sum_probs=24.5
Q ss_pred EEEEEcCCCeEEEEeccCCCcHHHHHHHHhHHHh
Q 044863 21 FVVYVGTEMKRFVVPTSYLKNPIFQQLLDKAAEE 54 (84)
Q Consensus 21 ~aVyVG~e~~RfvVp~~~L~hP~F~~LL~~aeeE 54 (84)
+||-+|.+.-.=++++. |+ +.=+++|++|++|
T Consensus 126 ~Pv~lg~~Gv~~i~~l~-L~-~~E~~~L~~s~~~ 157 (165)
T d1t2da2 126 TPVVLGANGVEQVIELQ-LN-SEEKAKFDEAIAE 157 (165)
T ss_dssp EEEEEETTEEEEECCCC-CC-HHHHHHHHHHHHH
T ss_pred eeEEEcCCceEEEeCCC-CC-HHHHHHHHHHHHH
Confidence 46667877777778876 66 7778999988876
No 18
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]}
Probab=30.29 E-value=13 Score=22.90 Aligned_cols=41 Identities=15% Similarity=0.203 Sum_probs=30.7
Q ss_pred eccCCCcHHHHHHHHhHHHhhCCcCCCCcEEecccHHHHHH
Q 044863 35 PTSYLKNPIFQQLLDKAAEEYGFHNKQNKIILPCDESTFQR 75 (84)
Q Consensus 35 p~~~L~hP~F~~LL~~aeeEfG~~~~~G~L~IPC~~~~Fe~ 75 (84)
...-|-.-+++.|.+.|++.+|.....-+|++|+.....++
T Consensus 109 s~~~l~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~~r 149 (183)
T d1dkgd1 109 APPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQR 149 (183)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHH
Confidence 44556667788889999998897665456999987766654
No 19
>d1whza_ d.50.3.2 (A:) Hypothetical protein TTHA1913 {Thermus thermophilus [TaxId: 274]}
Probab=29.87 E-value=40 Score=18.19 Aligned_cols=34 Identities=29% Similarity=0.441 Sum_probs=24.2
Q ss_pred CCeEEEEEcCCCeEEEEecc--CCCcHHHHHHHHhH
Q 044863 18 KGHFVVYVGTEMKRFVVPTS--YLKNPIFQQLLDKA 51 (84)
Q Consensus 18 kG~~aVyVG~e~~RfvVp~~--~L~hP~F~~LL~~a 51 (84)
+|-...|.-.+.++.+||.. -|.-...+..|++|
T Consensus 25 kGSH~~~~~~~~~~~~v~~~~kei~~gtl~~Ilkqa 60 (70)
T d1whza_ 25 KGGHRLYTHPDGRIVVVPFHSGELPKGTFKRILRDA 60 (70)
T ss_dssp ETTEEEEECTTSCEEEEECSSSSCCHHHHHHHHHHT
T ss_pred CCceeEEEcCCCCEEEcCCCCCccCHHHHHHHHHHh
Confidence 46566666445677777764 47778888888887
No 20
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]}
Probab=25.63 E-value=12 Score=24.38 Aligned_cols=20 Identities=20% Similarity=0.498 Sum_probs=17.4
Q ss_pred CCcHHHHHHHHhHHHhhCCc
Q 044863 39 LKNPIFQQLLDKAAEEYGFH 58 (84)
Q Consensus 39 L~hP~F~~LL~~aeeEfG~~ 58 (84)
-++|.|++.++++.+.+|++
T Consensus 22 ~~~p~~r~~~~~~~~~l~~~ 41 (235)
T d1mlaa1 22 ASYPIVEETFAEASAALGYD 41 (235)
T ss_dssp HHCHHHHHHHHHHHHHHTSC
T ss_pred HCCHHHHHHHHHHHHHhCCC
Confidence 46899999999999998864
No 21
>d3buxb3 d.93.1.1 (B:264-351) Cbl {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.00 E-value=29 Score=20.39 Aligned_cols=38 Identities=26% Similarity=0.529 Sum_probs=27.7
Q ss_pred CCCCeEEE-EEcCCCeEEEEeccCCCcHHHHHHHHhHHHhh
Q 044863 16 APKGHFVV-YVGTEMKRFVVPTSYLKNPIFQQLLDKAAEEY 55 (84)
Q Consensus 16 vpkG~~aV-yVG~e~~RfvVp~~~L~hP~F~~LL~~aeeEf 55 (84)
.+-|.-|+ ||-.+.. ++-+--.|.|++|+|++-++|-|
T Consensus 35 TrlGQWAIGyvt~dg~--IlQTIp~nk~L~qaLidG~reGf 73 (88)
T d3buxb3 35 TRLGQWAIGYVTADGN--ILQTIPHNKPLFQALIDGFREGF 73 (88)
T ss_dssp SSTTSEEEEEECTTSC--EEEECCSSCCHHHHHHHHHHHTS
T ss_pred ccccceeeeeeccCCc--eeeeccCccHHHHHHHhccccee
Confidence 45566666 7764332 55566689999999999999876
No 22
>d1oeyj_ d.15.2.2 (J:) Neutrophil cytosol factor 4 (p40phox component of NADPH oxidase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.00 E-value=27 Score=21.24 Aligned_cols=30 Identities=20% Similarity=0.407 Sum_probs=25.7
Q ss_pred CCeEEEEeccCCCcHHHHHHHHhHHHhhCC
Q 044863 28 EMKRFVVPTSYLKNPIFQQLLDKAAEEYGF 57 (84)
Q Consensus 28 e~~RfvVp~~~L~hP~F~~LL~~aeeEfG~ 57 (84)
..|-.-|.-+.-..|.|++||..-.++|+-
T Consensus 17 ~~rDI~veedl~~~P~ykdLl~lmr~~f~~ 46 (105)
T d1oeyj_ 17 TIKDIAVEEDLSSTPLLKDLLELTRREFQR 46 (105)
T ss_dssp EEEEEEECSCTTCCCCHHHHHHHHHHHHCC
T ss_pred eeeeEEEccccccCccHHHHHHHHHHHhcc
Confidence 356677888899999999999999999984
No 23
>d1pvva1 c.78.1.1 (A:1-150) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=23.67 E-value=21 Score=22.03 Aligned_cols=19 Identities=37% Similarity=0.389 Sum_probs=14.0
Q ss_pred cCCCcHHHHHHHHhH--HHhhC
Q 044863 37 SYLKNPIFQQLLDKA--AEEYG 56 (84)
Q Consensus 37 ~~L~hP~F~~LL~~a--eeEfG 56 (84)
.--+||. |.|+|.. .|+||
T Consensus 130 ~~~~HPt-QaL~D~~Ti~e~~G 150 (150)
T d1pvva1 130 SDFSHPC-QALADYMTIWEKKG 150 (150)
T ss_dssp CSSCCHH-HHHHHHHHHHHHHS
T ss_pred CCCCCcH-HHHHHHHHHHHHcC
Confidence 3457998 8999987 56666
No 24
>d2nptb1 d.15.2.2 (B:42-123) Mitogen-activated protein kinase kinase kinase 2, MEKK 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.47 E-value=64 Score=18.63 Aligned_cols=53 Identities=15% Similarity=0.349 Sum_probs=38.3
Q ss_pred CeEEEEeccCCCcH-HHHHHHHhHHHhhCCcCC----CCcEEec-ccHHHHHHHHHHHhcCC
Q 044863 29 MKRFVVPTSYLKNP-IFQQLLDKAAEEYGFHNK----QNKIILP-CDESTFQRLSIILSKQS 84 (84)
Q Consensus 29 ~~RfvVp~~~L~hP-~F~~LL~~aeeEfG~~~~----~G~L~IP-C~~~~Fe~vl~~l~~~~ 84 (84)
.+|..||.. -| .|.+|..++...||..-+ ++.|.|| =+-+..++++..+++|+
T Consensus 11 gEkRIi~f~---RPv~~~dl~~kv~~afGq~ldl~y~n~EL~IPl~~Q~DLDkAvellDrs~ 69 (82)
T d2nptb1 11 GEKRILQFP---RPVKLEDLRSKAKIAFGQSMDLHYTNNELVIPLTTQDDLDKAVELLDRSI 69 (82)
T ss_dssp TEEEEEEEC---SSCCHHHHHHHHHHHHTSCEEEEEEETTEEEECCCHHHHHHHHHHHHHCS
T ss_pred CceEEEecC---CCccHHHHHHHHHHHhCCeeeEEEecCeEEEecccHHHHHHHHHHHccCc
Confidence 456666643 23 489999999999995321 2568888 35578899999998775
No 25
>d2c35b2 d.230.1.1 (B:1-77) N-terminal, heterodimerisation domain of RBP7 (RpoE) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.70 E-value=56 Score=17.47 Aligned_cols=27 Identities=11% Similarity=0.233 Sum_probs=23.6
Q ss_pred eEEEEeccCCCcHHHHHHHHhHHHhhC
Q 044863 30 KRFVVPTSYLKNPIFQQLLDKAAEEYG 56 (84)
Q Consensus 30 ~RfvVp~~~L~hP~F~~LL~~aeeEfG 56 (84)
+...||.++|+.++-+.|.++..+.|.
T Consensus 9 d~v~i~P~~~~~~~~~~i~~~L~~~~e 35 (77)
T d2c35b2 9 HEILLHPRYFGPNLLNTVKQKLFTEVE 35 (77)
T ss_dssp EEEEECGGGCCSCHHHHHHHHHHHHHT
T ss_pred EEEEECHHHhCccHHHHHHHHHHHHhC
Confidence 467799999999999999999998874
No 26
>d1y74b1 a.194.1.1 (B:83-132) Peripheral plasma membrane protein cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.84 E-value=13 Score=19.93 Aligned_cols=20 Identities=40% Similarity=0.594 Sum_probs=14.1
Q ss_pred cCCCcHHHHHHHHh----HHHhhC
Q 044863 37 SYLKNPIFQQLLDK----AAEEYG 56 (84)
Q Consensus 37 ~~L~hP~F~~LL~~----aeeEfG 56 (84)
..|+.|.||+||.- |.+-||
T Consensus 26 ~lL~~PH~~aLL~aHD~VA~k~Y~ 49 (50)
T d1y74b1 26 RILTQPHFMALLQTHDVVAHEVYS 49 (50)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCHHHHHHHHHHHHHHHHhcc
Confidence 35788999999963 344555
Done!