BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044867
(81 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170 OS=Arabidopsis
thaliana GN=At4g11170 PE=2 SV=1
Length = 1095
Score = 89.4 bits (220), Expect = 6e-18, Method: Composition-based stats.
Identities = 44/81 (54%), Positives = 52/81 (64%)
Query: 1 MASSYRNNKKYDVFVSFRGEDTRDNFTSHLYSTLCRQNIQTFIDDQLNRGDEISESLLNA 60
MASS N+ +YDVF SFRGED R+NF SHL + I TF DD + R I L A
Sbjct: 1 MASSSSNSWRYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTIGHELRAA 60
Query: 61 IQASAISVIVFSEGYASSIWC 81
I+ S ISV++FSE YASS WC
Sbjct: 61 IRESKISVVLFSENYASSSWC 81
>sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis
thaliana GN=SNC1 PE=1 SV=3
Length = 1301
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/79 (50%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Query: 3 SSYRNNKKYDVFVSFRGEDTRDNFTSHLYSTLCRQNIQTFIDDQLNRGDEISESLLNAIQ 62
+S +++YDVF SFRGED RD+F SHL L R TFIDD++ R I LL+AI+
Sbjct: 4 ASSSGSRRYDVFPSFRGEDVRDSFLSHLLKEL-RGKAITFIDDEIERSRSIGPELLSAIK 62
Query: 63 ASAISVIVFSEGYASSIWC 81
S I++++FS+ YASS WC
Sbjct: 63 ESRIAIVIFSKNYASSTWC 81
>sp|Q40392|TMVRN_NICGU TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
Length = 1144
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 11 YDVFVSFRGEDTRDNFTSHLYSTLCRQNIQTFIDDQ-LNRGDEISESLLNAIQASAISVI 69
YDVF+SFRGEDTR FTSHLY L + I+TF DD+ L G I L AI+ S +++
Sbjct: 12 YDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIV 71
Query: 70 VFSEGYASSIWC 81
VFSE YA+S WC
Sbjct: 72 VFSENYATSRWC 83
>sp|Q9C5Q9|P2A05_ARATH Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5
PE=2 SV=1
Length = 411
Score = 63.9 bits (154), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 13 VFVSFRGEDTRDNFTSHLYSTLCRQNIQTFIDDQLNRGDEISESLLNAIQASAISVIVFS 72
VF++FRG+D R F S L L ++ I FID+Q RG + SL + I S I++++FS
Sbjct: 24 VFINFRGKDLRKGFMSFLKPALKKEKINVFIDEQEERGKYLI-SLFDTIGESKIALVIFS 82
Query: 73 EGYASSIWC 81
EGY S WC
Sbjct: 83 EGYCESHWC 91
>sp|Q9FHE9|P2A08_ARATH Protein PHLOEM PROTEIN 2-LIKE A8 OS=Arabidopsis thaliana GN=PP2A8
PE=2 SV=1
Length = 354
Score = 55.8 bits (133), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 13 VFVSFRGEDTRDNFTSHLYSTLCRQNIQTFIDDQLNRGDEISESLLNAIQASAISVIVFS 72
VF++FRG+D R+ F S L + NI FID G ++ +L IQ S ++V++FS
Sbjct: 16 VFINFRGKDLRNGFLSFLEPAMREANINVFIDKDEVVGTDLV-NLFVRIQESRVAVVIFS 74
Query: 73 EGYASSIWC 81
+ Y SS WC
Sbjct: 75 KDYTSSEWC 83
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 10 KYDVFVSFRGEDTRDNFTSHLYSTLCRQNIQTFIDDQLNRGDEISESLLNAIQASAISVI 69
+Y VF++FRG++ R++F L + + I F D+ RG ++ L I+ S ++V
Sbjct: 357 QYQVFINFRGDELRNSFVGFLVKAMRLEKINVFTDEVELRGTNLN-YLFRRIEESRVAVA 415
Query: 70 VFSEGYASSIWC 81
+FSE Y S WC
Sbjct: 416 IFSERYTESCWC 427
>sp|Q9FHE8|P2A06_ARATH Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6
PE=2 SV=1
Length = 392
Score = 49.3 bits (116), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 13 VFVSFRGEDTRDNFTSHLYSTLCRQNIQTFIDDQLNRGDEISESLLNAIQASAISVIVFS 72
VF+ FRG D R +F S L L NI FID+ G E++ +LL I+ S +++++FS
Sbjct: 17 VFICFRGADVRKHFISFLVPALREANINVFIDENEFLGSEMA-NLLTRIEESELALVIFS 75
Query: 73 EGYASSIWC 81
+ S C
Sbjct: 76 VDFTRSHRC 84
>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana
GN=WRKY19 PE=2 SV=1
Length = 1895
Score = 35.0 bits (79), Expect = 0.12, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Query: 5 YRNNKKYDVFVSF-RGEDTRDNFTSHLYSTLCRQNIQTFIDDQLNRGDEISESLLNAIQA 63
+ ++K YDV + + R + + ++F SHL ++LCR+ I + ++ N D A+
Sbjct: 662 FSSSKDYDVVIRYGRADISNEDFISHLRASLCRRGISVY--EKFNEVD--------ALPK 711
Query: 64 SAISVIVFSEGYASS 78
+ +IV + Y S
Sbjct: 712 CRVLIIVLTSTYVPS 726
>sp|Q19317|NBEA_CAEEL Putative neurobeachin homolog OS=Caenorhabditis elegans GN=sel-2
PE=2 SV=3
Length = 2507
Score = 34.3 bits (77), Expect = 0.24, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 28 SHLYSTLCRQNIQTFIDDQLNRGDEISESLLNAIQASAISVIVFSEGYASSIWC 81
+H YS R +I+ FID QL E+S + +A S+ V ++G A+S +C
Sbjct: 404 AHCYSRWGRSDIKCFIDGQLAETIELSWVVTSATNWDRCSIGVSADGTANSAFC 457
>sp|Q9FHE5|P2A07_ARATH Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7 OS=Arabidopsis
thaliana GN=PP2A7 PE=4 SV=1
Length = 332
Score = 33.5 bits (75), Expect = 0.43, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 20 EDTRDNFTSHLYSTLCRQNIQTFIDDQLNRGDEISESLLNAIQASAISVIVFSE 73
ED + L L +NI FID++ RG + ++L IQ S IS+ +FSE
Sbjct: 51 EDVSKGLINFLEPVLQNKNINVFIDEEEVRGKGL-KNLFKRIQDSKISLAIFSE 103
>sp|Q3AMW4|PYRB_SYNSC Aspartate carbamoyltransferase OS=Synechococcus sp. (strain CC9605)
GN=pyrB PE=3 SV=1
Length = 349
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 23 RDNFTSHLYSTLCRQNIQTFIDDQLNRGDEISESLLNAIQASAI 66
RD SH LC QN+ +NRG E+S SLL+ + S +
Sbjct: 272 RDFGLSHERMQLCGQNVPVLHPGPVNRGVELSGSLLDDPRCSLV 315
>sp|Q6R5N8|TLR13_MOUSE Toll-like receptor 13 OS=Mus musculus GN=Tlr13 PE=1 SV=1
Length = 991
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 15/87 (17%)
Query: 5 YRNNKK--YDVFVSFRGEDTRDNFTSHLYSTLC---RQNIQTFIDDQLNRGD-----EIS 54
++ KK YD FVSF D + +Y L Q QT L++ D +I
Sbjct: 826 HKTEKKFLYDAFVSFSATDE-----AWVYKELVPALEQGSQTTFKLCLHQRDFEPGIDIF 880
Query: 55 ESLLNAIQASAISVIVFSEGYASSIWC 81
E++ NAI S ++ V S Y S WC
Sbjct: 881 ENIQNAINTSRKTLCVVSNHYLHSEWC 907
>sp|A8XSV3|NBEA_CAEBR Putative neurobeachin homolog OS=Caenorhabditis briggsae GN=sel-2
PE=3 SV=1
Length = 2531
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 28 SHLYSTLCRQNIQTFIDDQLNRGDEISESLLNAIQASAISVIVFSEGYASSIWC 81
+H YS R +I+ FID QL E+S + + S+ V ++G ++ +C
Sbjct: 411 AHCYSRWGRSDIKCFIDGQLAETIELSWVVTSTTSWDRCSIGVSADGAVNTAFC 464
>sp|Q54NS8|AIFB_DICDI Apoptosis-inducing factor homolog B OS=Dictyostelium discoideum
GN=aifB PE=3 SV=1
Length = 387
Score = 28.9 bits (63), Expect = 9.9, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 23/36 (63%)
Query: 24 DNFTSHLYSTLCRQNIQTFIDDQLNRGDEISESLLN 59
D FT+ + + ++N++ ++D++ DEI +LLN
Sbjct: 185 DKFTNVVSKAMKKRNVEVILNDRITMPDEIKANLLN 220
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.131 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,658,364
Number of Sequences: 539616
Number of extensions: 810960
Number of successful extensions: 2448
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2432
Number of HSP's gapped (non-prelim): 15
length of query: 81
length of database: 191,569,459
effective HSP length: 52
effective length of query: 29
effective length of database: 163,509,427
effective search space: 4741773383
effective search space used: 4741773383
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)