BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044871
(189 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LUV1|PMEI2_ARATH Pectinesterase inhibitor 2 OS=Arabidopsis thaliana GN=PMEI2 PE=1
SV=1
Length = 173
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 75/147 (51%), Gaps = 4/147 (2%)
Query: 42 VDSVCKNALNYSDCVSALESDPQTPSASDLKALAKIAFAIAVTNTTNGKDYIAKMAKDSS 101
+ ++C A N S C S ++S+P+T S +DL+ LA I F A T+ + G I + K ++
Sbjct: 30 IKAICGKAKNQSFCTSYMKSNPKT-SGADLQTLANITFGSAQTSASEGFRKIQSLVKTAT 88
Query: 102 TATSLVPALKQCVSDYESAVVSFDSAKVEL-DEDVMSANYDAKAAGDSAVSCETSLNSTR 160
T + A CV Y+SA+ S + AK L D N AA + +CE + +
Sbjct: 89 NPT-MKKAYTSCVQHYKSAISSLNDAKQSLASGDGKGLNIKVSAAMEGPSTCEQDMADFK 147
Query: 161 LDVPSVRARNYYVNLFSNIGYVITDML 187
+D +V+ + N+ I VI++M+
Sbjct: 148 VDPSAVKNSGDFQNI-CGIVLVISNMM 173
>sp|O49603|CVIF2_ARATH Cell wall / vacuolar inhibitor of fructosidase 2 OS=Arabidopsis
thaliana GN=C/VIF2 PE=1 SV=1
Length = 180
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 12 VAAAAIALFLIIHSPSQTDARILKNSPSTLVDSVCKNALNYSDCVSALESDPQTPSASDL 71
+A++ I L L+ + S + K++ +T+++S CK Y CVSAL+SDP++P+A D
Sbjct: 1 MASSLIFLLLVTLTFSASTLISAKSNTTTIIESTCKTTNYYKFCVSALKSDPRSPTA-DT 59
Query: 72 KALAKIAFAIAVTNTTNGKDYIAKMAKDSSTATSLVPALKQCVSDYESAVVSFDSAKVEL 131
K LA I + +TN T+ +YIA + T L L+ C Y A S +L
Sbjct: 60 KGLASIMVGVGMTNATSTANYIAGNLSATVKDTVLKKVLQDCSEKYALAADSLRLTIQDL 119
Query: 132 DED 134
D++
Sbjct: 120 DDE 122
>sp|Q8GT41|PLA1_PLAAC Putative invertase inhibitor OS=Platanus acerifolia PE=1 SV=1
Length = 179
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 19/159 (11%)
Query: 41 LVDSVCKNA------LNYSDCVSALESDPQTPSASDLKALAKIAFAIAVTNTTNGKDYIA 94
+V CK +NY CV +L +DP++ +A DL+ L I+ +A+ + + + +I
Sbjct: 26 IVQGTCKKVAQRSPNVNYDFCVKSLGADPKSHTA-DLQGLGVISANLAIQHGSKIQTFIG 84
Query: 95 KMAKDSSTATSLVPALKQ----CVSDYESAVVSFDSAKVELD-EDVMSANYDAKAAGDSA 149
++ K + + PALK+ CV Y A S A + +D SAN AA D +
Sbjct: 85 RILK-----SKVDPALKKYLNDCVGLYADAKSSVQEAIADFKSKDYASANVKMSAALDDS 139
Query: 150 VSCETSLNSTRLDVPSVRARNY-YVNLFSNIGYVITDML 187
V+CE + V V N YV L + I IT +L
Sbjct: 140 VTCEDGFKEKKGIVSPVTKENKDYVQL-TAISLAITKLL 177
>sp|P83326|PMEI_ACTDE Pectinesterase inhibitor OS=Actinidia deliciosa GN=PMEI PE=1 SV=2
Length = 185
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 41 LVDSVCKNALNYSDCVSALESDPQTPSASDLKALAKIAFAIAVTNTTNGKDYIAKMAKDS 100
L+ +C N S C+ ALESDP++ ++ DLK L + + IA + IA + +
Sbjct: 36 LISEICPKTRNPSLCLQALESDPRS-ASKDLKGLGQFSIDIAQASAKQTSKIIASLT-NQ 93
Query: 101 STATSLVPALKQCVSDYESAVVSFDSAKVEL-DEDVMSANYDAKAAGDSAVSCETSLNST 159
+T L + C +Y A+ S AK L D S N A AA D A +CE S
Sbjct: 94 ATDPKLKGRYETCSENYADAIDSLGQAKQFLTSGDYNSLNIYASAAFDGAGTCEDSFEGP 153
Query: 160 RLDVPSVRARNYYVNL----FSNIGYVITDML 187
P++ + + +L +I VI+++L
Sbjct: 154 ----PNIPTQLHQADLKLEDLCDIVLVISNLL 181
>sp|Q9LNF2|PMEI1_ARATH Pectinesterase inhibitor 1 OS=Arabidopsis thaliana GN=PMEI1 PE=1
SV=1
Length = 176
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 5/150 (3%)
Query: 39 STLVDSVCKNALNYSDCVSALESDPQTPSASDLKALAKIAFAIAVTNTTNGKDYIAKMAK 98
S+ + ++C LN S C+ L + +P +L+ALAK T + +
Sbjct: 28 SSEMSTICDKTLNPSFCLKFLNTKFASP---NLQALAKTTLDSTQARATQTLKKLQSIID 84
Query: 99 DSSTATSLVPALKQCVSDYESAVVSFDSAKVEL-DEDVMSANYDAKAAGDSAVSCETSLN 157
S + A + CV +YESA+ + + A L D M N AA D A +C +
Sbjct: 85 GGVDPRSKL-AYRSCVDEYESAIGNLEEAFEHLASGDGMGMNMKVSAALDGADTCLDDVK 143
Query: 158 STRLDVPSVRARNYYVNLFSNIGYVITDML 187
R SV + + I VI++ML
Sbjct: 144 RLRSVDSSVVNNSKTIKNLCGIALVISNML 173
>sp|Q9LUL8|PME26_ARATH Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis
thaliana GN=PME26 PE=2 SV=1
Length = 968
Score = 33.5 bits (75), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 15 AAIALFLIIHSPSQTDARILKN---SPSTLVDSVCKNALNY-SDCVSALESDPQTPSASD 70
A IA F I R+ K+ +PS+++ +VC N NY + C+S++ P + + +D
Sbjct: 429 AIIAKFPIHERHGVQSPRLRKSPHPTPSSVLRTVC-NVTNYPASCISSISKLPLSKTTTD 487
Query: 71 LKALAKIAFAIAVTNTTNGKDYIAKMAKDSSTATSLVPALKQCVSDYESAVVSFDSAKVE 130
K L +++ + + K+A++++ L AL C ++ AV S +
Sbjct: 488 PKVLFRLSLQVTFDELNSIVGLPKKLAEETNDE-GLKSALSVCADVFDLAVDSVNDTISS 546
Query: 131 LDEDVMSA--NYDAKAAGD 147
LDE + N ++ GD
Sbjct: 547 LDEVISGGKKNLNSSTIGD 565
>sp|B5E1P6|GATB_STRP4 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
OS=Streptococcus pneumoniae serotype 19F (strain G54)
GN=gatB PE=3 SV=1
Length = 480
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 74 LAKIAFAIAVTNTTNGKDYIAK--MAKDSSTATSLVPALKQCVSDYESAVVSFDSAK 128
+AK F N ++Y+ K M + S A L+P + Q +D E+AVV F S K
Sbjct: 387 IAKKVFVHLAKNGGGAREYVEKAGMVQISDPAI-LIPIIHQVFADNEAAVVDFKSGK 442
>sp|P38153|AP3M_YEAST AP-3 complex subunit mu OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=APM3 PE=1 SV=2
Length = 483
Score = 32.0 bits (71), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 76 KIAFAIAVTNTTNGK---DYIAKMAK---DSSTATSLVPALKQCVSDYESAVVSFDSAKV 129
+IA+ I + T+G+ I + D STAT VP L+ C+ +YE+ +F + KV
Sbjct: 371 EIAYKIKILRNTHGRFENSIIMGQGQWIFDKSTATGTVPVLRGCI-EYENTGPNF-TKKV 428
Query: 130 ELDEDVMSANYDAKAA 145
+L + +Y ++A
Sbjct: 429 DLQTVSLEYSYIGQSA 444
>sp|Q9CLN7|PLSB_PASMU Glycerol-3-phosphate acyltransferase OS=Pasteurella multocida
(strain Pm70) GN=plsB PE=3 SV=1
Length = 809
Score = 31.2 bits (69), Expect = 3.7, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 52 YSDCVSALESDPQTPSASDLKALAKIAFAIAVTNTTNGKDYIAKMAKDSSTATSLVPALK 111
Y VS LE DP TP AS K +A ++V + N ++ D + ++ + +LK
Sbjct: 710 YYITVSILEKDPATPRASLEKDSQSVAQRLSVLHGINAPEFF-----DKAVFSAFIASLK 764
Query: 112 Q 112
Q
Sbjct: 765 Q 765
>sp|A5PK39|TPP2_BOVIN Tripeptidyl-peptidase 2 OS=Bos taurus GN=TPP2 PE=2 SV=1
Length = 1249
Score = 30.4 bits (67), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 9 MKHVAAAAIALFLIIHSPSQTDARILKN----SPSTLVDSVCKNALNYSD 54
+ H+ A+A+++ + + + DA I+KN STLVD++C+ +D
Sbjct: 1084 ISHIDQTALAVYIAMKTDPRPDAAIIKNDMDKQKSTLVDALCRKGCALAD 1133
>sp|F4HWQ8|CVIF1_ARATH Cell wall / vacuolar inhibitor of fructosidase 1 OS=Arabidopsis
thaliana GN=C/VIF1 PE=1 SV=1
Length = 205
Score = 30.4 bits (67), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Query: 37 SPSTLVDSVCKNALNYSDCVSALESDPQTPSASDLKALAKI------AFAIAVTNTTNG 89
S ++++ CK +++ CVS L SDP+ SA D LA I A N NG
Sbjct: 21 SEGSIIEPTCKETPDFNLCVSLLNSDPRGSSA-DTSGLALILIDKIKGLATKTLNEING 78
>sp|Q64560|TPP2_RAT Tripeptidyl-peptidase 2 OS=Rattus norvegicus GN=Tpp2 PE=2 SV=3
Length = 1249
Score = 30.0 bits (66), Expect = 8.4, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 9 MKHVAAAAIALFLIIHSPSQTDARILKN----SPSTLVDSVCKNALNYSD 54
+ H+ A+A+++ + + + DA +KN STLVD++C+ +D
Sbjct: 1084 ISHIDQTALAVYIAMKTDPRPDAATIKNDMDKQKSTLVDALCRKGCALAD 1133
>sp|A1UUC3|DNAK_BARBK Chaperone protein DnaK OS=Bartonella bacilliformis (strain ATCC
35685 / KC583) GN=dnaK PE=3 SV=1
Length = 631
Score = 30.0 bits (66), Expect = 9.1, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 13/107 (12%)
Query: 35 KNSPSTLVDSVCKNALNYSDCVSALESDPQTPSASDLKALAKIAFAIAVTNTTNGKDYIA 94
KN L+ S K+ Y D VSA + + +DLK AV + N ++ A
Sbjct: 531 KNQAEALIHSTEKSLTEYGDKVSAEDKGQIEAAIADLK---------AVLDGDNSEEVKA 581
Query: 95 KMAKDSSTATSLVPALKQCVSDYESAVVSFDSAKVELDEDVMSANYD 141
KM K + + L A+ + + A DSA ++DV+ A+++
Sbjct: 582 KMQKLAEVSMKLGQAMYEASNASAEADAVADSA----NDDVVDADFE 624
>sp|Q8N264|RHG24_HUMAN Rho GTPase-activating protein 24 OS=Homo sapiens GN=ARHGAP24 PE=1
SV=2
Length = 748
Score = 30.0 bits (66), Expect = 9.1, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 82 AVTNTTNGKDYIAKMAKDSSTATSLVPALKQCVS----DYESAVVSFDSAKVELDEDVMS 137
A +++ N + ++ + + S SLV +LKQ ++ +YES + S + + L+ ++MS
Sbjct: 623 ATSSSDNSETFVGNSSSNHSALHSLVSSLKQEMTKQKIEYESRIKSLEQRNLTLETEMMS 682
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.123 0.331
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,950,588
Number of Sequences: 539616
Number of extensions: 2045530
Number of successful extensions: 5097
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 4909
Number of HSP's gapped (non-prelim): 134
length of query: 189
length of database: 191,569,459
effective HSP length: 111
effective length of query: 78
effective length of database: 131,672,083
effective search space: 10270422474
effective search space used: 10270422474
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)